Validation Log 2025-12-14 21:19:02.188812 mwtab Python Library Version: 2.0.0 Source: https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN000404/mwtab/txt Study ID: ST000256 Analysis ID: AN000404 File format: txt Status: Contains Validation Issues Number of Issues: 34 Number of Warnings: 7 Number of Value Errors: 30 Number of Consistency Errors: 2 Number of Format Errors: 1 Issue Log: Error: An empty value or a null value was detected for the subsection, "PHONE", in the "PROJECT" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "PHONE", in the "STUDY" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "NUM_GROUPS", in the "STUDY" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: The value, "Mean (+SD): 54+8 years", for the subsection, "AGE_OR_AGE_RANGE", in the "SUBJECT" section should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['weeks', 'days', 'months', 'years']. Ignore this when more complicated descriptions are required. Error: The value, "Mean (+SD): 76+11 kg; BMI < 30", for the subsection, "WEIGHT_OR_WEIGHT_RANGE", in the "SUBJECT" section should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['g', 'mg', 'kg', 'lbs']. Ignore this when more complicated descriptions are required. Error: The value, "males and females (see study design)", for the subsection, "GENDER", in the "SUBJECT" section should be one of "Male", "Female", "Male, Female", "Hermaphrodite", or "N/A". Ignore this when more complicated descriptions are required. Error: An empty value or a null value was detected for the subsection, "HUMAN_MEDICATIONS", in the "SUBJECT" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "HUMAN_PRESCRIPTION_OTC", in the "SUBJECT" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "HUMAN_ALCOHOL_DRUG_USE", in the "SUBJECT" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "COLLECTION_SUMMARY", in the "COLLECTION" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "SAMPLEPREP_SUMMARY", in the "SAMPLEPREP" section. A legitimate value should be provided for this required subsection. Error: An empty value or a null value was detected for the subsection, "EXTRACTION_METHOD", in the "SAMPLEPREP" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "EXTRACT_CONCENTRATION_DILUTION", in the "SAMPLEPREP" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "EXTRACT_ENRICHMENT", in the "SAMPLEPREP" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "EXTRACT_CLEANUP", in the "SAMPLEPREP" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "EXTRACT_STORAGE", in the "SAMPLEPREP" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: An empty value or a null value was detected for the subsection, "SAMPLE_RESUSPENSION", in the "SAMPLEPREP" section. Either a legitimate value should be provided for this subsection, or it should be removed altogether. Error: The value, "10% (~0.5mM)", for the subsection, "RECEIVER_GAIN", in the "NM" section should be a unitless number. Ignore this when more complicated descriptions are required. Error: The value, "ONE-Probe", for the subsection, "PRESATURATION_POWER_LEVEL", in the "NM" section should be a number followed by a space with a unit (ex. "5 V") from the following list: ['W', 'dB']. Ignore this when more complicated descriptions are required. Error: The value, "5mm", for the subsection, "TEMPERATURE", in the "NM" section should be a number followed by a space with a unit (ex. "5 V") from the following list: ['°C', 'C', 'K']. Ignore this when more complicated descriptions are required. Error: The value for the subsection, "NUMBER_OF_SCANS", in the "NM" section should be a unitless number. Ignore this when more complicated descriptions are required. Error: The value, "saturation at 80 Hz induced field strength", for the subsection, "ACQUISITION_TIME", in the "NM" section should be a number followed by a space with a unit (ex. "5 V") from the following list: ['s']. Ignore this when more complicated descriptions are required. Error: The value, "5.5ms", for the subsection, "RELAXATION_DELAY", in the "NM" section should be a number followed by a space with a unit (ex. "5 V") from the following list: ['s', 'ms', 'us', 'μs']. Ignore this when more complicated descriptions are required. Error: An empty value or a null value was detected for the subsection, "Units", in the "NMR_METABOLITE_DATA" section. A legitimate value should be provided for this required subsection. Error: Unknown or invalid section, "CHROMATOGRAPHY". Error: The following metabolites in the, NMR_METABOLITE_DATA table were not found in the METABOLITES table: "1_6-Anhydro-B-D-glucose" "N_N-Dimethylglycine" Error: The following metabolites in the METABOLITES table were not found in the NMR_METABOLITE_DATA table: "1,6-Anhydro-B-D-glucose" "N,N-Dimethylglycine" Warning: The "ri" column at position 7 in the METABOLITES table, matches a standard column name, "retention_index". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "ri_type" column at position 8 in the METABOLITES table, matches a standard column name, "retention_index_type". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The standard column, "other_id", was found in the METABOLITES table as "other_id". If this column contains database IDs for standard databases such as KEGG, PubChem, HMDB, etc., it is recommended to make individual columns for these and not lump them together into a less descriptive "other_id" column. Warning: The "inchi_key" column at position 3 in the METABOLITES table has all null values. Warning: The "ri" column at position 7 in the METABOLITES table has all null values. Warning: The "ri_type" column at position 8 in the METABOLITES table has all null values. Warning: The "moverz_quant" column at position 9 in the METABOLITES table has all null values.