Validation Log 2025-12-14 23:43:49.145264 mwtab Python Library Version: 2.0.0 Source: https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN002896/mwtab/json Study ID: ST001785 Analysis ID: AN002896 File format: json Status: Contains Validation Issues Number of Issues: 19 Number of Warnings: 12 Number of Value Errors: 15 Number of Consistency Errors: 2 Number of Format Errors: 1 Issue Log: Error: The value, "18-60", in ["SUBJECT"]["AGE_OR_AGE_RANGE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['weeks', 'days', 'months', 'years']. Ignore this when more complicated descriptions are required. Error: The value, "600", in ["NM"]["SPECTROMETER_FREQUENCY"] should be a number followed by a space with a unit (ex. "5 V") from the following list: ['MHz']. Ignore this when more complicated descriptions are required. Error: The value, "310", in ["NM"]["TEMPERATURE"] should be a number followed by a space with a unit (ex. "5 V") from the following list: ['°C', 'C', 'K']. Ignore this when more complicated descriptions are required. Error: Unknown or invalid section, "CHROMATOGRAPHY". Error: The following metabolites in the, ["NMR_METABOLITE_DATA"]["Data"] table were not found in the ["NMR_METABOLITE_DATA"]["Metabolites"] table: "Lipoprotein Main Fractions_ Apo-A1_ HDL" "Lipoprotein Main Fractions_ Apo-A2_ HDL" "Lipoprotein Main Fractions_ Apo-B_ IDL" "Lipoprotein Main Fractions_ Apo-B_ LDL" "Lipoprotein Main Fractions_ Apo-B_ VLDL" "Lipoprotein Main Fractions_ Cholesterol_ HDL" "Lipoprotein Main Fractions_ Cholesterol_ IDL" "Lipoprotein Main Fractions_ Cholesterol_ LDL" "Lipoprotein Main Fractions_ Cholesterol_ VLDL" "Lipoprotein Main Fractions_ Free Cholesterol_ HDL" "Lipoprotein Main Fractions_ Free Cholesterol_ IDL" "Lipoprotein Main Fractions_ Free Cholesterol_ LDL" "Lipoprotein Main Fractions_ Free Cholesterol_ VLDL" "Lipoprotein Main Fractions_ Phospholipids_ HDL" "Lipoprotein Main Fractions_ Phospholipids_ IDL" "Lipoprotein Main Fractions_ Phospholipids_ LDL" "Lipoprotein Main Fractions_ Phospholipids_ VLDL" "Lipoprotein Main Fractions_ Triglycerides_ HDL" "Lipoprotein Main Fractions_ Triglycerides_ IDL" "Lipoprotein Main Fractions_ Triglycerides_ LDL" "Lipoprotein Main Fractions_ Triglycerides_ VLDL" "Main Parameters_ Apo-A1_ Apo-A1" "Main Parameters_ Apo-A2_ Apo-A2" "Main Parameters_ Apo-B100_ Apo-B100" "Main Parameters_ Cholesterol_ Chol" "Main Parameters_ HDL Cholesterol_ HDL-Chol" "Main Parameters_ LDL Cholesterol_ LDL-Chol" "Main Parameters_ Triglycerides_ TG" Error: The following metabolites in the ["NMR_METABOLITE_DATA"]["Metabolites"] table were not found in the ["NMR_METABOLITE_DATA"]["Data"] table: "Lipoprotein Main Fractions, Apo-A1, HDL" "Lipoprotein Main Fractions, Apo-A2, HDL" "Lipoprotein Main Fractions, Apo-B, IDL" "Lipoprotein Main Fractions, Apo-B, LDL" "Lipoprotein Main Fractions, Apo-B, VLDL" "Lipoprotein Main Fractions, Cholesterol, HDL" "Lipoprotein Main Fractions, Cholesterol, IDL" "Lipoprotein Main Fractions, Cholesterol, LDL" "Lipoprotein Main Fractions, Cholesterol, VLDL" "Lipoprotein Main Fractions, Free Cholesterol, HDL" "Lipoprotein Main Fractions, Free Cholesterol, IDL" "Lipoprotein Main Fractions, Free Cholesterol, LDL" "Lipoprotein Main Fractions, Free Cholesterol, VLDL" "Lipoprotein Main Fractions, Phospholipids, HDL" "Lipoprotein Main Fractions, Phospholipids, IDL" "Lipoprotein Main Fractions, Phospholipids, LDL" "Lipoprotein Main Fractions, Phospholipids, VLDL" "Lipoprotein Main Fractions, Triglycerides, HDL" "Lipoprotein Main Fractions, Triglycerides, IDL" "Lipoprotein Main Fractions, Triglycerides, LDL" "Lipoprotein Main Fractions, Triglycerides, VLDL" "Main Parameters, Apo-A1, Apo-A1" "Main Parameters, Apo-A2, Apo-A2" "Main Parameters, Apo-B100, Apo-B100" "Main Parameters, Cholesterol, Chol" "Main Parameters, HDL Cholesterol, HDL-Chol" "Main Parameters, LDL Cholesterol, LDL-Chol" "Main Parameters, Triglycerides, TG" Warning: The "ri" column at position 7 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "ri_type" column at position 8 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index_type". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The standard column, "other_id", was found in the METABOLITES table as "other_id". If this column contains database IDs for standard databases such as KEGG, PubChem, HMDB, etc., it is recommended to make individual columns for these and not lump them together into a less descriptive "other_id" column. Error: Column(s) with no name were found in the ["NMR_METABOLITE_DATA"]["Metabolites"] table. Warning: The "pubchem_id" column at position 2 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "inchi_key" column at position 3 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "kegg_id" column at position 4 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "other_id" column at position 5 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "other_id_type" column at position 6 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "ri" column at position 7 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "ri_type" column at position 8 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "moverz_quant" column at position 9 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "" column at position 10 in the ["NMR_METABOLITE_DATA"]["Metabolites"] table has all null values.