Validation Log 2025-12-15 00:06:00.408983 mwtab Python Library Version: 2.0.0 Source: https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN003295/mwtab/json Study ID: ST002025 Analysis ID: AN003295 File format: json Status: Contains Validation Issues Number of Issues: 12 Number of Warnings: 7 Number of Value Errors: 6 Number of Consistency Errors: 0 Number of Format Errors: 5 Issue Log: Error: The required property, "FLOW_GRADIENT", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "FLOW_RATE", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "COLUMN_TEMPERATURE", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "SOLVENT_A", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "SOLVENT_B", in ["CHROMATOGRAPHY"] is missing. Warning: The "m/z" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "moverz_quant". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "pubchem" column at position 3 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "pubchem_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "pubchem" column at position 3 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "pubchem_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are: 0 C00312 2 C00379 3 C00385 4 C00183 5 C00299 6 C00366 7 C00086 8 C00106 9 C00167 10 C00082 11 C00078 12 C01157 13 C00178 14 C00188 15 C01620 16 C16884 17 C00898 18 C00795 19 C00089 20 C00042 21 C00780 22 C00065 23 C00805 24 C00818 26 C01685 27 C00296 28 C00022 29 C00013 32 C02067 33 C00148 36 C00346 37 C00009 38 C05332 39 C00079 40 C00146 41 C01468 42 C00802 43 C08362 44 C00249 45 C01879 46 C00077 48 C01517 49 C00645 50 C03878 51 C06424 54 C02989 55 C00073 57 C00392 58 C00208 59 C00711 60 C00047 61 C01595 63 C00123 64 C02679 65 C07064 66 C01432 68 C00639 69 C00407 71 C03546 72 C00294 75 C00954 76 C00262 78 C00192 80 C00530 81 C00135 82 C01586 84 C00387 85 C03139 86 C00160 87 C00037 88 C03189 89 C05401 90 C00116 92 C00489 93 C00064 94 C00025 95 C00191 96 C00103 97 C00221 98 C02483 99 C00880 100 C00122 101 C02095 102 C02336 103 C00189 104 C01796 105 C02341 106 C00074 107 C06429 108 C11457 109 C04483 110 C14151 111 C01420 112 C01419 113 C00097 115 C00300 117 C00327 118 C00158 119 C16526 120 C00187 122 C00090 123 C01571 124 C14152 125 C00099 126 C01753 127 C00180 128 C08261 129 C00049 130 C00152 131 C00219 132 C06425 133 C01904 134 C00872 135 C00376 136 C00026 138 C00041 139 C06104 140 C00417 142 C00642 143 C00156 144 C01089 146 C05145 147 C06474 148 C01744 150 C00233 151 C00109 152 C02630 153 C05984 156 C02721 157 C06342 159 D01947 160 C01885 161 C00823 162 C07326 Warning: The "KEGG" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "kegg_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "KEGG" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "kegg_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are: 0 439205 2 6912 3 1188 4 6287 5 6029 6 1175 7 1176 8 1174 9 17473 10 6057 11 6305 12 5810 13 1135 14 6288 15 5460407 16 169019 17 444305 18 439312 19 5988 20 1110 21 5202 22 5951 23 338 24 33037 25 10975657 26 5460677 27 6508 28 1060 29 1023 30 154035 32 15047 33 145742 34 12665 35 6931662 36 1015 37 1004 38 1001 39 6140 40 996 41 2879 42 67126 43 445638 44 985 45 7405 46 6262 47 8221 48 156391 49 439281 50 24139 51 11005 54 158980 55 6137 56 13130 57 6251 58 439186 59 525 60 5962 61 5280450 62 2724705 63 6106 64 3893 65 11333 66 612 68 151152 69 6306 70 164860 71 440043 72 6021 73 10258 74 3744 75 802 76 790 77 61159526 78 787 79 16639161 80 785 81 6274 82 464 83 10465 84 6802 85 439918 86 757 87 750 88 754 89 16048618 90 753 92 743 93 5961 94 33032 95 94715 96 65533 97 64689 98 92729 99 128869 100 444972 101 439650 102 439709 103 700 104 439574 105 5325915 106 1005 107 445580 108 91 109 222528 110 92094 111 595 112 439498 113 5862 114 18647689 115 586 116 9989541 117 9750 118 311 119 5282768 120 5997 121 10469 122 289 123 2969 124 8989 125 239 126 222284 127 243 128 19347555 129 5960 130 6267 131 444899 132 10467 133 94154 134 100714 135 638015 136 51 138 5950 139 196 140 643757 141 93579 142 127 143 135 144 92135 145 192742 146 64956 147 16069996 148 10394 149 102959 150 70 151 58 152 43 153 440864 154 150929 155 18302 156 6657 157 97250 158 250402 159 24699 160 14900 161 2682 162 64960 163 23368901 Warning: The "ret ind" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The column "ret ind" was found in the ["MS_METABOLITE_DATA"]["Metabolites"] table, but this column implies that another column, "retention_index_type", should also exist, and that column was not found.