Validation Log
2025-12-15 00:09:51.539886
mwtab Python Library Version: 2.0.0
Source:        https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN003366/mwtab/json
Study ID:      ST002066
Analysis ID:   AN003366
File format:   json
Status: Contains Validation Issues
Number of Issues: 14

Number of Warnings: 8

Number of Value Errors: 14

Number of Consistency Errors: 0

Number of Format Errors: 0

Issue Log:
Error: The value in ["SUBJECT"]["AGE_OR_AGE_RANGE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['weeks', 'days', 'months', 'years']. Ignore this when more complicated descriptions are required.
Error: The value, "Male and female", in ["SUBJECT"]["GENDER"] should be one of "Male", "Female", "Male, Female", "Hermaphrodite", or "N/A". Ignore this when more complicated descriptions are required.
Error: An empty value or a null value was detected in ["MS"]["COLLISION_ENERGY"]. Either a legitimate value should be provided for this key, or it should be removed altogether.
Error: The value, "NA", in ["MS"]["COLLISION_GAS"] should be one of "Nitrogen" or "Argon". Ignore this when more complicated descriptions are required.
Error: The value, "0.3 ml/min", in ["CHROMATOGRAPHY"]["FLOW_RATE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['mL/min', 'uL/min', 'μL/min']. Ignore this when more complicated descriptions are required.
Error: The value, "60 bar at starting conditions", in ["CHROMATOGRAPHY"]["COLUMN_PRESSURE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['psi', 'bar']. Ignore this when more complicated descriptions are required.
Warning: The "InchiKEY" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "inchi_key". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "InchiKEY" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "inchi_key", and some of the values in the column do not match the expected type or format for that column. The non-matching values are:
48     0
55     0
58     0
66     0
67     0
68     0
69     0
70     0
86     0
89     0
90     0
102    0
108    0
118    0
154    0
155    0
157    0
247    0
249    0
278    0
289    0
295    0
298    0
300    0
335    0
336    0
350    0
368    0
394    0
450    0
Warning: The "KEGGid" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "kegg_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "KEGGid" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "kegg_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are:
3      0
14     0
16     0
31     0
38     0
39     0
40     0
41     0
42     0
45     0
46     0
47     0
48     0
55     0
56     0
57     0
58     0
59     0
60     0
61     0
62     0
63     0
64     0
65     0
66     0
67     0
68     0
69     0
70     0
71     0
72     0
73     0
74     0
75     0
76     0
77     0
78     0
79     0
80     0
82     0
83     0
86     0
89     0
90     0
92     0
93     0
101    0
102    0
111    0
113    0
118    0
122    0
125    0
128    0
131    0
132    0
133    0
134    0
138    0
144    0
151    0
154    0
155    0
157    0
160    0
164    0
169    0
172    0
175    0
177    0
181    0
182    0
183    0
184    0
185    0
186    0
187    0
188    0
189    0
190    0
191    0
192    0
193    0
194    0
195    0
196    0
197    0
200    0
201    0
202    0
203    0
204    0
205    0
207    0
209    0
225    0
247    0
249    0
253    0
254    0
257    0
261    0
278    0
289    0
295    0
296    0
298    0
299    0
300    0
310    0
312    0
316    0
319    0
335    0
336    0
337    0
342    0
343    0
344    0
347    0
350    0
367    0
368    0
383    0
386    0
394    0
399    0
401    0
405    0
407    0
408    0
409    0
410    0
411    0
412    0
413    0
414    0
415    0
417    0
418    0
421    0
422    0
423    0
424    0
428    0
443    0
444    0
450    0
Warning: The "HMDBID" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "hmdb_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "HMDBID" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "hmdb_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are:
0      0
1      0
2      0
4      0
5      0
7      0
9      0
10     0
12     0
13     0
14     0
18     0
22     0
24     0
25     0
28     0
38     0
39     0
40     0
41     0
42     0
43     0
45     0
46     0
47     0
48     0
56     0
57     0
58     0
59     0
60     0
61     0
62     0
64     0
65     0
66     0
67     0
68     0
69     0
70     0
71     0
72     0
73     0
74     0
75     0
76     0
77     0
78     0
79     0
80     0
81     0
85     0
86     0
91     0
93     0
94     0
96     0
97     0
98     0
99     0
102    0
103    0
106    0
107    0
108    0
109    0
110    0
111    0
112    0
113    0
117    0
118    0
119    0
121    0
123    0
124    0
125    0
126    0
128    0
130    0
131    0
137    0
139    0
140    0
141    0
144    0
146    0
148    0
154    0
155    0
158    0
161    0
162    0
164    0
166    0
169    0
172    0
173    0
174    0
175    0
176    0
177    0
178    0
179    0
181    0
183    0
185    0
186    0
187    0
188    0
189    0
191    0
193    0
194    0
195    0
196    0
200    0
201    0
202    0
205    0
206    0
211    0
212    0
213    0
214    0
217    0
221    0
224    0
226    0
231    0
239    0
240    0
241    0
243    0
246    0
247    0
249    0
250    0
251    0
252    0
256    0
259    0
260    0
262    0
263    0
264    0
265    0
266    0
267    0
268    0
270    0
271    0
273    0
274    0
275    0
276    0
278    0
279    0
280    0
281    0
282    0
283    0
285    0
286    0
288    0
289    0
291    0
292    0
295    0
296    0
298    0
299    0
300    0
301    0
303    0
304    0
306    0
307    0
308    0
309    0
310    0
313    0
314    0
315    0
316    0
317    0
320    0
322    0
323    0
325    0
326    0
328    0
329    0
330    0
331    0
332    0
335    0
336    0
338    0
342    0
345    0
348    0
349    0
350    0
352    0
353    0
354    0
355    0
360    0
361    0
365    0
368    0
369    0
373    0
374    0
375    0
378    0
379    0
380    0
382    0
383    0
384    0
385    0
387    0
388    0
389    0
392    0
393    0
394    0
395    0
396    0
398    0
399    0
401    0
405    0
407    0
408    0
409    0
410    0
411    0
412    0
413    0
414    0
417    0
418    0
422    0
423    0
424    0
431    0
432    0
436    0
437    0
439    0
441    0
442    0
444    0
446    0
448    0
449    0
450    0
Warning: The "Lmid" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "lm_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "retention time" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_time". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.