Validation Log
2025-12-15 00:10:41.207761
mwtab Python Library Version: 2.0.0
Source:        https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN003382/mwtab/json
Study ID:      ST002075
Analysis ID:   AN003382
File format:   json
Status: Contains Validation Issues
Number of Issues: 16

Number of Warnings: 11

Number of Value Errors: 11

Number of Consistency Errors: 2

Number of Format Errors: 1

Issue Log:
Error: The value, "Male and female", in ["SUBJECT"]["GENDER"] should be one of "Male", "Female", "Male, Female", "Hermaphrodite", or "N/A". Ignore this when more complicated descriptions are required.
Error: The required property, "COLUMN_TEMPERATURE", in ["CHROMATOGRAPHY"] is missing.
Error: The following metabolites in the, ["MS_METABOLITE_DATA"]["Data"] table were not found in the ["MS_METABOLITE_DATA"]["Metabolites"] table:
	"12_13-Dihydroxy-9Z-octadecenoic acid"
	"13-Keto-9Z_11E-octadecadienoic acid"
	"1_4-Cyclohexanedicarboxylic acid"
	"1_4-Dihydroxy-2-naphthoic acid"
	"1_5-Isoquinolinediol"
	"17(18)-Epoxy-5Z_8Z_11Z_14Z-eicosatetraenoic acid"
	"2_3_5-Trimethylpyrazine"
	"2_8-Quinolinediol"
	"2^-Deoxyadenosine"
	"2^-Deoxyguanosine"
	"2^-Deoxyinosine"
	"2^-O-Methylinosine"
	"3^-O-Methylcytidine"
	"3^-O-Methylinosine"
	"5-Methyl-5_6-Dihydrouracil"
	"5^-Methylthioadenosine"
	"9-Oxo-10E_12Z-octadecadienoic acid"
	"cis-5_8_11_14_17-Eicosapentaenoic acid"
	"Monolinolenin (9c_12c_15c)"
	"N2_N2-Dimethylguanosine"
	"N6_N6_N6-Trimethyl-L-lysine"
	"N_N-Dimethylarginine ADMA and SDMA"
Error: The following metabolites in the ["MS_METABOLITE_DATA"]["Metabolites"] table were not found in the ["MS_METABOLITE_DATA"]["Data"] table:
	"12,13-Dihydroxy-9Z-octadecenoic acid"
	"13-Keto-9Z,11E-octadecadienoic acid"
	"1,4-Cyclohexanedicarboxylic acid"
	"1,4-Dihydroxy-2-naphthoic acid"
	"1,5-Isoquinolinediol"
	"17(18)-Epoxy-5Z,8Z,11Z,14Z-eicosatetraenoic acid"
	"2,3,5-Trimethylpyrazine"
	"2,8-Quinolinediol"
	"2'-Deoxyadenosine"
	"2'-Deoxyguanosine"
	"2'-Deoxyinosine"
	"2'-O-Methylinosine"
	"3'-O-Methylcytidine"
	"3'-O-Methylinosine"
	"5-Methyl-5,6-Dihydrouracil"
	"5'-Methylthioadenosine"
	"9-Oxo-10E,12Z-octadecadienoic acid"
	"cis-5,8,11,14,17-Eicosapentaenoic acid"
	"Monolinolenin (9c,12c,15c)"
	"N2,N2-Dimethylguanosine"
	"N6,N6,N6-Trimethyl-L-lysine"
	"N,N-Dimethylarginine ADMA and SDMA"
Warning: The "ri" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "ri_type" column at position 8 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index_type". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The column pair, "ri" and "ri_type", in the METABOLITES table should have data in the same rows, but at least one row has data in one column and nothing in the other.
Warning: The standard column, "other_id", was found in the METABOLITES table as "other_id". If this column contains database IDs for standard databases such as KEGG, PubChem, HMDB, etc., it is recommended to make individual columns for these and not lump them together into a less descriptive "other_id" column.
Error: Column(s) with no name were found in the ["MS_METABOLITE_DATA"]["Metabolites"] table.
Warning: The "pubchem_id" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "inchi_key" column at position 3 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "kegg_id" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "other_id" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "other_id_type" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "ri_type" column at position 8 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "" column at position 10 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.