Validation Log 2025-12-15 00:16:29.383897 mwtab Python Library Version: 2.0.0 Source: https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN003407/mwtab/json Study ID: ST002088 Analysis ID: AN003407 File format: json Status: Contains Validation Issues Number of Issues: 20 Number of Warnings: 10 Number of Value Errors: 12 Number of Consistency Errors: 2 Number of Format Errors: 5 Issue Log: Error: The value, "40-80", in ["SUBJECT"]["AGE_OR_AGE_RANGE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['weeks', 'days', 'months', 'years']. Ignore this when more complicated descriptions are required. Error: The value, "Male and female", in ["SUBJECT"]["GENDER"] should be one of "Male", "Female", "Male, Female", "Hermaphrodite", or "N/A". Ignore this when more complicated descriptions are required. Error: The required property, "FLOW_GRADIENT", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "FLOW_RATE", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "COLUMN_TEMPERATURE", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "SOLVENT_A", in ["CHROMATOGRAPHY"] is missing. Error: The required property, "SOLVENT_B", in ["CHROMATOGRAPHY"] is missing. Error: The following metabolites in the, ["MS_METABOLITE_DATA"]["Data"] table were not found in the ["MS_METABOLITE_DATA"]["Metabolites"] table: "1_2-dilinoleoyl-GPC (18:2/18:2)" "1_2-dipalmitoyl-GPC (16:0/16:0)" "bilirubin (E_Z or Z_E)*" "bilirubin (Z_Z)" "ceramide (d16:1/24:1_ d18:1/22:1)*" "ceramide (d18:1/14:0_ d16:1/16:0)*" "ceramide (d18:1/17:0_ d17:1/18:0)*" "ceramide (d18:1/20:0_ d16:1/22:0_ d20:1/18:0)*" "ceramide (d18:2/24:1_ d18:1/24:2)*" "diacylglycerol (16:1/18:2 [2]_ 16:0/18:3 [1])*" "glycosyl ceramide (d18:1/20:0_ d16:1/22:0)*" "glycosyl ceramide (d18:2/24:1_ d18:1/24:2)*" "sphingomyelin (d17:1/14:0_ d16:1/15:0)*" "sphingomyelin (d17:1/16:0_ d18:1/15:0_ d16:1/17:0)*" "sphingomyelin (d17:2/16:0_ d18:2/15:0)*" "sphingomyelin (d18:0/18:0_ d19:0/17:0)*" "sphingomyelin (d18:0/20:0_ d16:0/22:0)*" "sphingomyelin (d18:1/14:0_ d16:1/16:0)*" "sphingomyelin (d18:1/17:0_ d17:1/18:0_ d19:1/16:0)" "sphingomyelin (d18:1/18:1_ d18:2/18:0)" "sphingomyelin (d18:1/19:0_ d19:1/18:0)*" "sphingomyelin (d18:1/20:0_ d16:1/22:0)*" "sphingomyelin (d18:1/20:1_ d18:2/20:0)*" "sphingomyelin (d18:1/20:2_ d18:2/20:1_ d16:1/22:2)*" "sphingomyelin (d18:1/21:0_ d17:1/22:0_ d16:1/23:0)*" "sphingomyelin (d18:1/22:1_ d18:2/22:0_ d16:1/24:1)*" "sphingomyelin (d18:1/22:2_ d18:2/22:1_ d16:1/24:2)*" "sphingomyelin (d18:1/24:1_ d18:2/24:0)*" "sphingomyelin (d18:1/25:0_ d19:0/24:1_ d20:1/23:0_ d19:1/24:0)*" "sphingomyelin (d18:2/14:0_ d18:1/14:1)*" "sphingomyelin (d18:2/16:0_ d18:1/16:1)*" "sphingomyelin (d18:2/21:0_ d16:2/23:0)*" "sphingomyelin (d18:2/23:0_ d18:1/23:1_ d17:1/24:1)*" "sphingomyelin (d18:2/24:1_ d18:1/24:2)*" Error: The following metabolites in the ["MS_METABOLITE_DATA"]["Metabolites"] table were not found in the ["MS_METABOLITE_DATA"]["Data"] table: "1,2-dilinoleoyl-GPC (18:2/18:2)" "1,2-dipalmitoyl-GPC (16:0/16:0)" "bilirubin (E,Z or Z,E)*" "bilirubin (Z,Z)" "ceramide (d16:1/24:1, d18:1/22:1)*" "ceramide (d18:1/14:0, d16:1/16:0)*" "ceramide (d18:1/17:0, d17:1/18:0)*" "ceramide (d18:1/20:0, d16:1/22:0, d20:1/18:0)*" "ceramide (d18:2/24:1, d18:1/24:2)*" "diacylglycerol (16:1/18:2 [2], 16:0/18:3 [1])*" "glycosyl ceramide (d18:1/20:0, d16:1/22:0)*" "glycosyl ceramide (d18:2/24:1, d18:1/24:2)*" "sphingomyelin (d17:1/14:0, d16:1/15:0)*" "sphingomyelin (d17:1/16:0, d18:1/15:0, d16:1/17:0)*" "sphingomyelin (d17:2/16:0, d18:2/15:0)*" "sphingomyelin (d18:0/18:0, d19:0/17:0)*" "sphingomyelin (d18:0/20:0, d16:0/22:0)*" "sphingomyelin (d18:1/14:0, d16:1/16:0)*" "sphingomyelin (d18:1/17:0, d17:1/18:0, d19:1/16:0)" "sphingomyelin (d18:1/18:1, d18:2/18:0)" "sphingomyelin (d18:1/19:0, d19:1/18:0)*" "sphingomyelin (d18:1/20:0, d16:1/22:0)*" "sphingomyelin (d18:1/20:1, d18:2/20:0)*" "sphingomyelin (d18:1/20:2, d18:2/20:1, d16:1/22:2)*" "sphingomyelin (d18:1/21:0, d17:1/22:0, d16:1/23:0)*" "sphingomyelin (d18:1/22:1, d18:2/22:0, d16:1/24:1)*" "sphingomyelin (d18:1/22:2, d18:2/22:1, d16:1/24:2)*" "sphingomyelin (d18:1/24:1, d18:2/24:0)*" "sphingomyelin (d18:1/25:0, d19:0/24:1, d20:1/23:0, d19:1/24:0)*" "sphingomyelin (d18:2/14:0, d18:1/14:1)*" "sphingomyelin (d18:2/16:0, d18:1/16:1)*" "sphingomyelin (d18:2/21:0, d16:2/23:0)*" "sphingomyelin (d18:2/23:0, d18:1/23:1, d17:1/24:1)*" "sphingomyelin (d18:2/24:1, d18:1/24:2)*" Warning: The "ri" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "ri_type" column at position 8 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index_type". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The standard column, "other_id", was found in the METABOLITES table as "other_id". If this column contains database IDs for standard databases such as KEGG, PubChem, HMDB, etc., it is recommended to make individual columns for these and not lump them together into a less descriptive "other_id" column. Error: Column(s) with no name were found in the ["MS_METABOLITE_DATA"]["Metabolites"] table. Warning: The "inchi_key" column at position 3 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "other_id" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "other_id_type" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "ri" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "ri_type" column at position 8 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "moverz_quant" column at position 9 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values. Warning: The "" column at position 10 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.