Validation Log
2025-12-15 00:21:46.387070
mwtab Python Library Version: 2.0.0
Source:        https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN003476/mwtab/json
Study ID:      ST002123
Analysis ID:   AN003476
File format:   json
Status: Contains Validation Issues
Number of Issues: 17

Number of Warnings: 12

Number of Value Errors: 14

Number of Consistency Errors: 2

Number of Format Errors: 0

Issue Log:
Error: The value, "0.35ml/min", in ["CHROMATOGRAPHY"]["FLOW_RATE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['mL/min', 'uL/min', 'μL/min']. Ignore this when more complicated descriptions are required.
Error: The value, "40", in ["CHROMATOGRAPHY"]["COLUMN_TEMPERATURE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['°C', 'C']. Ignore this when more complicated descriptions are required.
Error: The following metabolites in the, ["MS_METABOLITE_DATA"]["Data"] table were not found in the ["MS_METABOLITE_DATA"]["Metabolites"] table:
	"2_3-dihydroxybenzoic acid"
	"2_3-Diphosphoglyceric acid"
	"5^-Methylthioadenosine"
	"6-phospho-D-glucono-1_5-lactone"
	"7_8-dihydrofolate"
	"Fructose 1_6-bisphosphate"
	"Glyceric acid 1_3-biphosphate"
	"Ng_NG-dimethyl-L-arginine"
	"octulose-1_8-bisphosphate (OBP)"
	"Sedoheptulose 1_7-bisphosphate (SBP)"
Error: The following metabolites in the ["MS_METABOLITE_DATA"]["Metabolites"] table were not found in the ["MS_METABOLITE_DATA"]["Data"] table:
	"2,3-dihydroxybenzoic acid"
	"2,3-Diphosphoglyceric acid"
	"5'-Methylthioadenosine"
	"6-phospho-D-glucono-1,5-lactone"
	"7,8-dihydrofolate"
	"Fructose 1,6-bisphosphate"
	"Glyceric acid 1,3-biphosphate"
	"Ng,NG-dimethyl-L-arginine"
	"octulose-1,8-bisphosphate (OBP)"
	"Sedoheptulose 1,7-bisphosphate (SBP)"
Warning: The "ri" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "ri_type" column at position 8 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_index_type". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The standard column, "other_id", was found in the METABOLITES table as "other_id". If this column contains database IDs for standard databases such as KEGG, PubChem, HMDB, etc., it is recommended to make individual columns for these and not lump them together into a less descriptive "other_id" column.
Error: Column(s) with no name were found in the ["MS_METABOLITE_DATA"]["Metabolites"] table.
Warning: The "pubchem_id" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "inchi_key" column at position 3 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "kegg_id" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "other_id" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "other_id_type" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "ri" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "ri_type" column at position 8 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "moverz_quant" column at position 9 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.
Warning: The "" column at position 10 in the ["MS_METABOLITE_DATA"]["Metabolites"] table has all null values.