Validation Log
2025-12-15 01:21:51.780150
mwtab Python Library Version: 2.0.0
Source:        https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN004567/mwtab/txt
Study ID:      ST002809
Analysis ID:   AN004567
File format:   txt
Status: Contains Validation Issues
Number of Issues: 15

Number of Warnings: 14

Number of Value Errors: 12

Number of Consistency Errors: 0

Number of Format Errors: 0

Issue Log:
Error: The value, "65", for the subsection, "COLUMN_TEMPERATURE", in the "CHROMATOGRAPHY" section should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['°C', 'C']. Ignore this when more complicated descriptions are required.
Warning: The "SUPER PATHWAY" column at position 2 in the METABOLITES table, matches a standard column name, "pathway". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "SUB PATHWAY" column at position 3 in the METABOLITES table, matches a standard column name, "pathway". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "PUBCHEM" column at position 9 in the METABOLITES table, matches a standard column name, "pubchem_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "KEGG" column at position 11 in the METABOLITES table, matches a standard column name, "kegg_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "HMDB" column at position 12 in the METABOLITES table, matches a standard column name, "hmdb_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "CAS" column at position 10 in the METABOLITES table, matches a standard column name, "cas_number". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "CAS" column at position 10 in the METABOLITES table, matches a standard column name, "cas_number", and some of the values in the column do not match the expected type or format for that column. The non-matching values are:
16                    768593
44     26853-31-6;26853-31-6
71     58961-34-8;58962-34-8
72        59-02-9;10191-41-0
133         11-58-0;111-58-0
187    85187-10-6;85187-10-6
Warning: The "COMP ID" column at position 4 in the METABOLITES table, matches a standard column name, "other_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "CHEMICAL ID" column at position 6 in the METABOLITES table, matches a standard column name, "other_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "RI" column at position 7 in the METABOLITES table, matches a standard column name, "retention_index". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The column "COMP ID" was found in the METABOLITES table, but this column implies that another column, "other_id_type", should also exist, and that column was not found.
Warning: The column "RI" was found in the METABOLITES table, but this column implies that another column, "retention_index_type", should also exist, and that column was not found.
Warning: The standard column, "other_id", was found in the METABOLITES table as "COMP ID". If this column contains database IDs for standard databases such as KEGG, PubChem, HMDB, etc., it is recommended to make individual columns for these and not lump them together into a less descriptive "other_id" column.
Warning: The "SUPER PATHWAY" column at position 2 in the METABOLITES table may have incorrect values. 90% or more of the values are the same, but 10% or less are different.