Validation Log 2025-12-15 01:50:31.627283 mwtab Python Library Version: 2.0.0 Source: https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN004978/mwtab/json Study ID: ST003036 Analysis ID: AN004978 File format: json Status: Contains Validation Issues Number of Issues: 18 Number of Warnings: 8 Number of Value Errors: 18 Number of Consistency Errors: 0 Number of Format Errors: 0 Issue Log: Error: An empty value or a null value was detected in ["STUDY"]["TOTAL_SUBJECTS"]. Either a legitimate value should be provided for this key, or it should be removed altogether. Error: An empty value or a null value was detected in ["STUDY"]["NUM_MALES"]. Either a legitimate value should be provided for this key, or it should be removed altogether. Error: An empty value or a null value was detected in ["STUDY"]["NUM_FEMALES"]. Either a legitimate value should be provided for this key, or it should be removed altogether. Error: The value, "NA", in ["SUBJECT"]["AGE_OR_AGE_RANGE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['weeks', 'days', 'months', 'years']. Ignore this when more complicated descriptions are required. Error: The value, "NA", in ["SUBJECT"]["WEIGHT_OR_WEIGHT_RANGE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['g', 'mg', 'kg', 'lbs']. Ignore this when more complicated descriptions are required. Error: The value, "Not applicable", in ["SUBJECT"]["GENDER"] should be one of "Male", "Female", "Male, Female", "Hermaphrodite", or "N/A". Ignore this when more complicated descriptions are required. Error: An empty value or a null value was detected in ["MS"]["COLLISION_ENERGY"]. Either a legitimate value should be provided for this key, or it should be removed altogether. Error: The value, "50", in ["MS"]["DRY_GAS_FLOW"] should be a number followed by a space with a unit (ex. "5 V") from the following list: ['L/hr', 'L/min']. Ignore this when more complicated descriptions are required. Error: The value, "120", in ["MS"]["DRY_GAS_TEMP"] should be a number followed by a space with a unit (ex. "5 V") from the following list: ['°C', 'C']. Ignore this when more complicated descriptions are required. Error: The value, "0.3 ml/min", in ["CHROMATOGRAPHY"]["FLOW_RATE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['mL/min', 'uL/min', 'μL/min']. Ignore this when more complicated descriptions are required. Warning: The "InchiKEY" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "inchi_key". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "InchiKEY" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "inchi_key", and some of the values in the column do not match the expected type or format for that column. The non-matching values are: 23 0 41 0 49 0 122 0 132 0 172 0 173 0 184 0 196 0 201 0 209 0 240 0 259 0 260 0 261 0 262 0 263 0 264 0 265 0 266 0 267 0 268 0 269 0 270 0 271 0 272 0 273 0 274 0 275 0 276 0 277 0 278 0 279 0 280 0 281 0 282 0 283 0 284 0 285 0 286 0 287 0 288 0 289 0 290 0 291 0 292 0 293 0 294 0 295 0 296 0 297 0 298 0 299 0 300 0 301 0 302 0 303 0 304 0 305 0 306 0 307 0 308 0 309 0 310 0 311 0 312 0 313 0 314 0 315 0 317 0 318 0 319 0 320 0 321 0 322 0 323 0 324 0 325 0 326 0 327 0 328 0 329 0 330 0 331 0 332 0 333 0 334 0 335 0 336 0 337 0 338 0 339 0 340 0 341 0 342 0 343 0 344 0 345 0 346 0 347 0 348 0 349 0 350 0 351 0 352 0 353 0 354 0 355 0 356 0 357 0 358 0 359 0 360 0 361 0 362 0 363 0 364 0 365 0 366 0 367 0 368 0 369 0 370 0 371 0 372 0 373 0 374 0 375 0 376 0 377 0 378 0 379 0 394 0 395 0 396 0 397 0 399 0 419 0 420 0 421 0 423 0 424 0 425 0 426 0 427 0 428 0 429 0 430 0 431 0 432 0 433 0 434 0 435 0 436 0 437 0 438 0 439 0 440 0 441 0 442 0 443 0 444 0 445 0 446 0 447 0 448 0 449 0 450 0 451 0 452 0 453 0 454 0 455 0 456 0 457 0 458 0 459 0 460 0 461 0 462 0 463 0 464 0 465 0 466 0 467 0 468 0 470 0 471 0 472 0 473 0 474 0 485 0 486 0 487 0 488 0 496 0 497 0 498 0 499 0 500 0 501 0 502 0 503 0 505 0 512 0 513 0 516 0 517 0 518 0 519 0 520 0 521 0 522 0 523 0 524 0 525 0 526 0 527 0 534 0 536 0 537 0 538 0 539 0 540 0 541 0 546 0 549 0 550 0 564 0 567 0 568 0 574 0 575 0 585 0 590 0 595 0 601 0 602 0 603 0 604 0 609 0 610 0 Warning: The "KEGGid" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "kegg_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "KEGGid" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "kegg_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are: 3 0 5 0 8 0 9 0 19 0 20 0 21 0 23 0 30 0 31 0 32 0 40 0 44 0 47 0 49 0 54 0 55 0 61 0 62 0 63 0 71 0 99 0 102 0 104 0 107 0 109 0 119 0 122 0 129 0 132 0 133 0 136 0 137 0 139 0 141 0 147 0 149 0 156 0 158 0 160 0 166 0 169 0 170 0 172 0 173 0 180 0 182 0 184 0 186 0 188 0 190 0 193 0 196 0 198 0 200 0 201 0 204 0 205 0 206 0 209 0 211 0 214 0 216 0 222 0 226 0 228 0 239 0 240 0 245 0 253 0 256 0 259 0 260 0 261 0 262 0 263 0 264 0 265 0 266 0 267 0 268 0 269 0 270 0 271 0 272 0 273 0 274 0 275 0 276 0 277 0 278 0 279 0 280 0 281 0 282 0 283 0 284 0 285 0 286 0 287 0 288 0 289 0 290 0 291 0 292 0 293 0 294 0 295 0 296 0 297 0 298 0 299 0 300 0 301 0 302 0 303 0 304 0 305 0 306 0 307 0 308 0 309 0 310 0 311 0 312 0 313 0 314 0 315 0 317 0 318 0 319 0 320 0 321 0 322 0 323 0 324 0 325 0 326 0 327 0 328 0 329 0 330 0 331 0 332 0 333 0 334 0 335 0 336 0 337 0 338 0 339 0 340 0 341 0 342 0 343 0 344 0 345 0 346 0 347 0 348 0 349 0 350 0 351 0 352 0 353 0 354 0 355 0 356 0 357 0 358 0 359 0 360 0 361 0 362 0 363 0 364 0 365 0 366 0 367 0 368 0 369 0 370 0 371 0 372 0 373 0 374 0 375 0 376 0 377 0 378 0 379 0 394 0 395 0 396 0 397 0 399 0 401 0 412 0 413 0 414 0 415 0 417 0 419 0 420 0 421 0 422 0 423 0 424 0 425 0 426 0 427 0 428 0 429 0 430 0 431 0 432 0 433 0 434 0 435 0 436 0 437 0 438 0 439 0 440 0 441 0 442 0 443 0 444 0 445 0 446 0 447 0 448 0 449 0 450 0 451 0 452 0 453 0 454 0 455 0 456 0 457 0 458 0 459 0 460 0 461 0 462 0 463 0 464 0 465 0 466 0 467 0 468 0 469 0 470 0 471 0 472 0 473 0 474 0 477 0 478 0 485 0 486 0 487 0 488 0 489 0 495 0 496 0 497 0 498 0 499 0 500 0 501 0 502 0 503 0 510 0 512 0 513 0 516 0 517 0 518 0 519 0 520 0 521 0 523 0 524 0 525 0 526 0 527 0 528 0 529 0 530 0 532 0 533 0 534 0 535 0 536 0 537 0 538 0 539 0 540 0 541 0 546 0 547 0 548 0 549 0 550 0 552 0 561 0 562 0 564 0 566 0 567 0 568 0 569 0 570 0 571 0 572 0 574 0 575 0 578 0 580 0 584 0 585 0 590 0 591 0 593 0 594 0 595 0 596 0 601 0 602 0 603 0 604 0 607 0 608 0 609 0 610 0 Warning: The "HMDBID" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "hmdb_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "HMDBID" column at position 7 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "hmdb_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are: 3 0 4 0 5 0 7 0 8 0 9 0 10 0 14 0 17 0 20 0 21 0 22 0 23 0 26 0 28 0 31 0 34 0 36 0 40 0 41 0 42 0 43 0 44 0 47 0 48 0 49 0 50 0 51 0 55 0 56 0 57 0 60 0 61 0 62 0 63 0 64 0 69 0 70 0 76 0 81 0 83 0 88 0 89 0 93 0 94 0 97 0 100 0 103 0 105 0 107 0 109 0 113 0 116 0 118 0 119 0 122 0 124 0 126 0 128 0 129 0 130 0 132 0 133 0 134 0 135 0 136 0 138 0 139 0 140 0 141 0 142 0 143 0 145 0 148 0 151 0 152 0 153 0 154 0 156 0 157 0 158 0 159 0 160 0 164 0 166 0 167 0 168 0 170 0 171 0 172 0 173 0 174 0 178 0 179 0 180 0 182 0 184 0 186 0 189 0 190 0 191 0 194 0 195 0 196 0 197 0 199 0 201 0 204 0 205 0 206 0 209 0 210 0 214 0 216 0 218 0 220 0 221 0 223 0 224 0 226 0 227 0 230 0 234 0 235 0 237 0 240 0 241 0 242 0 244 0 245 0 246 0 248 0 251 0 255 0 256 0 258 0 259 0 260 0 261 0 262 0 263 0 264 0 265 0 266 0 267 0 268 0 269 0 270 0 271 0 272 0 273 0 274 0 275 0 276 0 277 0 278 0 279 0 280 0 281 0 282 0 283 0 284 0 285 0 286 0 287 0 288 0 289 0 290 0 291 0 292 0 293 0 294 0 295 0 296 0 297 0 298 0 299 0 300 0 301 0 302 0 303 0 304 0 305 0 306 0 307 0 308 0 309 0 310 0 311 0 312 0 313 0 314 0 315 0 317 0 318 0 319 0 320 0 321 0 322 0 323 0 324 0 325 0 326 0 327 0 328 0 329 0 330 0 331 0 332 0 333 0 334 0 335 0 336 0 337 0 338 0 339 0 340 0 341 0 342 0 343 0 344 0 345 0 346 0 347 0 348 0 349 0 350 0 351 0 352 0 353 0 354 0 355 0 356 0 357 0 358 0 359 0 360 0 361 0 362 0 363 0 364 0 365 0 366 0 367 0 368 0 369 0 370 0 371 0 372 0 373 0 374 0 375 0 376 0 377 0 378 0 379 0 380 0 381 0 382 0 383 0 384 0 385 0 386 0 387 0 388 0 390 0 391 0 392 0 393 0 394 0 395 0 396 0 397 0 399 0 400 0 401 0 402 0 406 0 408 0 409 0 410 0 412 0 414 0 415 0 416 0 417 0 418 0 419 0 420 0 421 0 422 0 423 0 424 0 425 0 426 0 427 0 428 0 429 0 430 0 431 0 432 0 433 0 434 0 435 0 436 0 437 0 438 0 439 0 440 0 441 0 442 0 443 0 444 0 445 0 446 0 447 0 448 0 449 0 450 0 451 0 452 0 453 0 454 0 455 0 456 0 457 0 458 0 459 0 460 0 461 0 462 0 463 0 464 0 465 0 466 0 467 0 468 0 469 0 470 0 471 0 472 0 473 0 474 0 476 0 477 0 478 0 481 0 482 0 483 0 484 0 485 0 486 0 487 0 488 0 490 0 491 0 492 0 493 0 494 0 495 0 496 0 497 0 498 0 499 0 500 0 501 0 502 0 503 0 504 0 505 0 506 0 507 0 508 0 510 0 512 0 513 0 514 0 516 0 517 0 518 0 519 0 520 0 521 0 522 0 523 0 524 0 525 0 526 0 527 0 529 0 530 0 531 0 532 0 533 0 534 0 535 0 536 0 537 0 538 0 539 0 540 0 541 0 542 0 543 0 545 0 546 0 547 0 548 0 549 0 550 0 555 0 556 0 558 0 559 0 560 0 562 0 563 0 564 0 567 0 568 0 569 0 570 0 571 0 572 0 573 0 574 0 575 0 577 0 578 0 580 0 581 0 582 0 583 0 584 0 585 0 586 0 592 0 593 0 594 0 595 0 596 0 599 0 601 0 602 0 603 0 604 0 605 0 606 0 609 0 610 0 614 0 615 0 616 0 617 0 618 0 Warning: The "Lmid" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "lm_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "retention time" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "retention_time". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.