Validation Log 2025-12-15 02:15:41.951975 mwtab Python Library Version: 2.0.0 Source: https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN005472/mwtab/json Study ID: ST003339 Analysis ID: AN005472 File format: json Status: Contains Validation Issues Number of Issues: 59 Number of Warnings: 56 Number of Value Errors: 59 Number of Consistency Errors: 0 Number of Format Errors: 0 Issue Log: Error: The value, "Male and female", in ["SUBJECT"]["GENDER"] should be one of "Male", "Female", "Male, Female", "Hermaphrodite", or "N/A". Ignore this when more complicated descriptions are required. Error: The value in ["CHROMATOGRAPHY"]["FLOW_RATE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['mL/min', 'uL/min', 'μL/min']. Ignore this when more complicated descriptions are required. Error: The value, "40", in ["CHROMATOGRAPHY"]["COLUMN_TEMPERATURE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['°C', 'C']. Ignore this when more complicated descriptions are required. Warning: The "m/z" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "moverz_quant". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "PubChem ID" column at position 3 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "pubchem_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name. Warning: The "L_M_HFD_Ctrl_N8_pos" column at position 32 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_F_HFD Ctrl_A29_pos" column at position 49 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_F_HFD Ctrl_A31_pos" column at position 50 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_F_HFD Ctrl_A32_pos" column at position 51 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_F_HFD Ctrl_A63_pos" column at position 54 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_F_HFD Ctrl_A64_pos" column at position 55 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_F_HFD highDINCH_A47_pos" column at position 62 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_F_HFD lowDINCH_A75_pos" column at position 77 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A21_pos" column at position 80 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A22_pos" column at position 81 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A23_pos" column at position 82 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A24_pos" column at position 83 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A53_pos" column at position 84 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A54_pos" column at position 85 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A55_pos" column at position 86 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "L_M_HFD Ctrl_A56_pos" column at position 87 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "Test_mock_extraction_1_pos" column at position 112 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "Test_mock_extraction_2_pos" column at position 113 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "Test_mock_extraction_3_pos" column at position 114 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "Test_mock_extraction_4_pos" column at position 115 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_F_HFD_Ctrl_N13" column at position 116 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_F_HFD_Ctrl_N14" column at position 117 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_F_HFD_Ctrl_N45" column at position 118 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_F_HFD_Ctrl_N46" column at position 119 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_F_HFD_Ctrl_N47" column at position 120 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD_Ctrl_N37" column at position 131 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD_Ctrl_N38" column at position 132 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD_Ctrl_N39" column at position 133 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD_Ctrl_N6" column at position 134 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD_Ctrl_N8" column at position 135 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD Ctrl_A23" column at position 164 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD Ctrl_A54" column at position 166 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "scWAT_M_HFD lowDINCH_A65" column at position 178 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "visWAT_F_HFD_Ctrl_N46" column at position 184 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "visWAT_F_HFD_Ctrl_N47" column at position 185 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "visWAT_M_HFD_Ctrl_N37" column at position 196 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "visWAT_M_HFD_Ctrl_N38" column at position 197 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "visWAT_M_HFD_Ctrl_N39" column at position 198 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "visWAT_M_HFD_Ctrl_N6" column at position 199 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "visWAT_M_HFD_Ctrl_N8" column at position 200 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_F_HFD_Ctrl_N13" column at position 248 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_F_HFD_Ctrl_N14" column at position 249 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_F_HFD_Ctrl_N45" column at position 250 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD_Ctrl_N37" column at position 263 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD_Ctrl_N6" column at position 266 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD_Ctrl_N8" column at position 267 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_F_HFD Ctrl_A29" column at position 278 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_F_HFD Ctrl_A62" column at position 280 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_F_HFD Ctrl_A63" column at position 281 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD Ctrl_A21" column at position 295 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD Ctrl_A22" column at position 296 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD Ctrl_A23" column at position 297 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD Ctrl_A53" column at position 298 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values. Warning: The "BAT_M_HFD Ctrl_A54" column at position 299 in the ["MS_METABOLITE_DATA"]["Data"] table has all null values.