Validation Log
2025-12-15 03:29:24.466006
mwtab Python Library Version: 2.0.0
Source:        https://www.metabolomicsworkbench.org/rest/study/analysis_id/AN007185/mwtab/json
Study ID:      ST004315
Analysis ID:   AN007185
File format:   json
Status: Contains Validation Issues
Number of Issues: 16

Number of Warnings: 7

Number of Value Errors: 16

Number of Consistency Errors: 0

Number of Format Errors: 0

Issue Log:
Error: An empty value or a null value was detected in ["SUBJECT"]["GENOTYPE_STRAIN"]. Either a legitimate value should be provided for this key, or it should be removed altogether.
Error: The value, "4w-28w", in ["SUBJECT"]["AGE_OR_AGE_RANGE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['weeks', 'days', 'months', 'years']. Ignore this when more complicated descriptions are required.
Error: An empty value or a null value was detected in ["CHROMATOGRAPHY"]["INSTRUMENT_NAME"]. A legitimate value should be provided for this required key.
Error: An empty value or a null value was detected in ["CHROMATOGRAPHY"]["COLUMN_NAME"]. A legitimate value should be provided for this required key.
Error: An empty value or a null value was detected in ["CHROMATOGRAPHY"]["FLOW_GRADIENT"]. A legitimate value should be provided for this required key.
Error: The value, "none", in ["CHROMATOGRAPHY"]["FLOW_RATE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['mL/min', 'uL/min', 'μL/min']. Ignore this when more complicated descriptions are required.
Error: The value, "none", in ["CHROMATOGRAPHY"]["COLUMN_TEMPERATURE"] should be a number or range (ex. "5-6") followed by a space with a unit (ex. "5 V") from the following list: ['°C', 'C']. Ignore this when more complicated descriptions are required.
Error: An empty value or a null value was detected in ["CHROMATOGRAPHY"]["SOLVENT_A"]. A legitimate value should be provided for this required key.
Error: An empty value or a null value was detected in ["CHROMATOGRAPHY"]["SOLVENT_B"]. A legitimate value should be provided for this required key.
Warning: The "neutral_mass" column at position 3 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "mass". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "formula" column at position 2 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "formula", and some of the values in the column do not match the expected type or format for that column. The non-matching values are:
7     C10H17NO6/C12H23NO5
8     C11H19NO6/C11H19NO6
12    C13H21NO6/C15H27NO5
13    C13H23NO6/C15H29NO5
20    C15H27NO6/C17H33NO5
23    C17H31NO6/C19H37NO5
27    C19H33NO6/C21H39NO5
28    C19H35NO6/C21H41NO5
32    C21H37NO6/C23H43NO5
33    C21H39NO6/C23H45NO5
37    C23H39NO6/C25H45NO5
38    C23H41NO6/C25H47NO5
39    C23H43NO6/C25H49NO5
42    C25H45NO6/C27H51NO5
43    C25H47NO6/C27H53NO5
Warning: The "Pubchem CID" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "pubchem_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "Pubchem CID" column at position 5 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "pubchem_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are:
7      22833583/NA
13     71296139/NA
20     71752223/NA
28    145720503/NA
33    145720507/NA
43    145720513/NA
Warning: The "KEGG ID" column at position 4 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "kegg_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "HMDB ID" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "hmdb_id". If this match was not in error, the column should be renamed to the standard name or a name that doesn't resemble the standard name.
Warning: The "HMDB ID" column at position 6 in the ["MS_METABOLITE_DATA"]["Metabolites"] table, matches a standard column name, "hmdb_id", and some of the values in the column do not match the expected type or format for that column. The non-matching values are:
7     HMDB0002095/NA
13    HMDB0061677/NA
28    HMDB0013327/NA