@article{long2020super,
  title={Super resolution microscopy and deep learning identify Zika virus reorganization of the endoplasmic reticulum},
  author={Long, Rory KM and Moriarty, Kathleen P and Cardoen, Ben and Gao, Guang and Vogl, A Wayne and Jean, Francois and Hamarneh, Ghassan and Nabi, Ivan R},
  journal={Scientific Reports},
  volume={10},
  number={1},
  pages={1--18},
  year={2020},
  publisher={Springer}
}
@article{cardoen2023log,
  title={Log-Paradox: Necessary and sufficient conditions for confounding statistically significant pattern reversal under the log-transform},
  author={Cardoen, Ben and Yedder, Hanene Ben and Lee, Sieun and Nabi, Ivan Robert and Hamarneh, Ghassan},
  journal={arXiv preprint arXiv:2302.04780},
  year={2023}
}
@article{cardoen2022specht,
  title={SPECHT: S elf-tuning P lausibility based object detection E nables quantification of C onflict in H et erogeneous multi-scale microscopy},
  author={Cardoen, Ben and Wong, Timothy and Alan, Parsa and Lee, Sieun and Matsubara, Joanne Aiko and Nabi, Ivan Robert and Hamarneh, Ghassan},
  journal={Plos one},
  volume={17},
  number={12},
  pages={e0276726},
  year={2022},
  publisher={Public Library of Science San Francisco, CA USA}
}
@article{alan2022basal,
  title={Basal Gp78-dependent mitophagy promotes mitochondrial health and limits mitochondrial ROS},
  author={Alan, Parsa and Vandevoorde, Kurt R and Joshi, Bharat and Cardoen, Ben and Gao, Guang and Mohammadzadeh, Yahya and Hamarneh, Ghassan and Nabi, Ivan R},
  journal={Cellular and Molecular Life Sciences},
  volume={79},
  number={11},
  pages={1--20},
  year={2022},
  publisher={Springer}
}
@article{cardoen2019ergo,
  title={ERGO: efficient recurrent graph optimized emitter density estimation in single molecule localization microscopy},
  author={Cardoen, Ben and Yedder, Hanene Ben and Sharma, Anmol and Chou, Keng C and Nabi, Ivan Robert and Hamarneh, Ghassan},
  journal={IEEE Transactions on Medical Imaging},
  volume={39},
  number={6},
  pages={1942--1956},
  year={2019},
  publisher={IEEE}
}
@article{cardoen2022membrane,
  title={Membrane contact site detection (MCS-DETECT) reveals dual control of rough mitochondria-ER contacts},
  author={Cardoen, Ben and Vandevoorde, Kurt and Gao, Guang and Alan, Parsa and Liu, William and Tiliakou, Ellie and Vogl, A Wayne and Hamarneh, Ghassan and Nabi, Ivan R},
  journal={bioRxiv},
  pages={2022--06},
  year={2022},
  publisher={Cold Spring Harbor Laboratory}
}