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"comments": "Added via API (include_tree_in_synth) from Bazinet, A. L., Mitter, K. T., Davis, D. R., Van Nieukerken, E. J., Cummings, M. P., & Mitter, C. (2017). Phylotranscriptomics resolves ancient divergences in the Lepidoptera. Systematic Entomology, 42(2), 305-316",
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"comments": "Added via API (include_tree_in_synth) from Hwang, W. S. and Weirauch, C. 2012, 'Evolutionary History of Assassin Bugs (Insecta: Hemiptera: Reduviidae): Insights from Divergence Dating and Ancestral State Reconstruction', PLoS ONE, vol. 7, no. 9, p. e45523",
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"comments": "Added via API (include_tree_in_synth) from Irisarri I., Eernisse D.J., & Zardoya R. 2014. Molecular phylogeny of Acanthochitonina (Mollusca: Polyplacophora: Chitonida): three new mitochondrial genomes, rearranged gene orders and systematics. Journal of Natural History, .",
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"comments": "Added via API (include_tree_in_synth) from Vasilikopoulos, A., Balke, M., Kukowka, S., Pflug, J. M., Martin, S., Meusemann, K., Hendrich, L., Mayer, C., Maddison, D. R., Niehuis, O., Beutel, R. G., & Misof, B. (2021). Phylogenomic analyses clarify the pattern of evolution of Adephaga (Coleoptera) and highlight phylogenetic artefacts due to model misspecification and excessive data trimming. Systematic Entomology, 46(4), 991\u20131018. Portico. https://doi.org/10.1111/syen.12508\n",
"decision": "INCLUDED",
"name": "Fig. 3",
"studyID": "ot_2337",
"treeID": "tree1"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from Outomuro, D., Adams, D. C., & Johansson, F. (2013). Wing shape allometry and aerodynamics in calopterygid damselflies: a comparative approach. BMC Evolutionary Biology, 13(1), 118. https://doi.org/10.1186/1471-2148-13-118\n",
"decision": "INCLUDED",
"name": "Fig. 7",
"studyID": "ot_2338",
"treeID": "tree1"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from Leoc\u00e1dio, M., Sim\u00f5es, M. V. P., Sekerka, L., Schrago, C. G., Mermudes, J. R. M., & Windsor, D. M. (2020). Molecular systematics reveals the origins of subsociality in tortoise beetles (Coleoptera, Chrysomelidae, Cassidinae). Systematic Entomology, 45(4), 894\u2013910. Portico. https://doi.org/10.1111/syen.12434\n",
"decision": "INCLUDED",
"name": "Fig. 4",
"studyID": "ot_2339",
"treeID": "tree1"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from Nelsen, M. P., Ree, R. H., & Moreau, C. S. (2018). Ant\u2013plant interactions evolved through increasing interdependence. Proceedings of the National Academy of Sciences, 115(48), 12253\u201312258. https://doi.org/10.1073/pnas.1719794115\n",
"decision": "INCLUDED",
"name": "Dryad_Supplementary_File_7_ML_TREE_treepl_185.tre",
"studyID": "ot_2316",
"treeID": "tree2"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from Sless, T., & Rehan, S. (2023). Phylogeny of the carpenter bees (Apidae: Xylocopinae) highlights repeated evolution of sociality. Biology Letters, 19(8). https://doi.org/10.1098/rsbl.2023.0252\n",
"decision": "INCLUDED",
"name": "Tree 1",
"studyID": "ot_2350",
"treeID": "tree1"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from Revely, L., Eggleton, P., Clement, R., Zhou, C., & Bishop, T. R. (2024). The diversity of social complexity in termites. Proceedings of the Royal Society B: Biological Sciences, 291(2024). https://doi.org/10.1098/rspb.2023.2791\n",
"decision": "INCLUDED",
"name": "Fig. 2",
"studyID": "ot_2351",
"treeID": "tree1"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from S\u00e1nchez-Guill\u00e9n, R. A., Ceccarelli, S., Villalobos, F., Neupane, S., Rivas-Torres, A., Sanmart\u00edn-Villar, I., ... & Cordero-Rivera, A. (2020). The evolutionary history of colour polymorphism in Ischnura damselflies (Odonata: Coenagrionidae). Odonatologica, 49(3-4), 333-370.",
"decision": "INCLUDED",
"name": "Fig. 3",
"studyID": "ot_2355",
"treeID": "tree1"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from Ji, L., Jia, Z., & Bai, X. (2024). Comparative Analysis of the Mitochondrial Genomes of Three Species of Yangiella (Hemiptera: Aradidae) and the Phylogenetic Implications of Aradidae. Insects, 15(7), 533. https://doi.org/10.3390/insects15070533\n",
"decision": "INCLUDED",
"name": "Fig. 10",
"studyID": "ot_2359",
"treeID": "tree1"
},
{
"SHA": "",
"comments": "Added via API (include_tree_in_synth) from Gohli, J., Kirkendall, L. R., Smith, S. M., Cognato, A. I., Hulcr, J., & Jordal, B. H. (2017). Biological factors contributing to bark and ambrosia beetle species diversification. Evolution, 71(5), 1258\u20131272. Portico. https://doi.org/10.1111/evo.13219\n",
"decision": "INCLUDED",
"name": "Fig. 2",
"studyID": "ot_2366",
"treeID": "tree1"
}
],
"description": "Trees for synthesis, but ranked lower than other synthesis collections",
"name": "Inputs to synthesis (default)",
"queries": []
}