format-version: 1.2 data-version: releases/2023-11-14 subsetdef: Angiosperm "" subsetdef: Arabidopsis "" subsetdef: Bryophytes "" subsetdef: Citrus "" subsetdef: CL "" subsetdef: common_anatomy "" subsetdef: Gymnosperms "" subsetdef: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension "" subsetdef: http://purl.obolibrary.org/obo/valid_for_go_gp2term "" subsetdef: http://purl.obolibrary.org/obo/valid_for_go_ontology "" subsetdef: http://purl.obolibrary.org/obo/valid_for_gocam "" subsetdef: Maize "" subsetdef: Musa "" subsetdef: Poaceae "" subsetdef: Potato "" subsetdef: Pteridophytes "" subsetdef: reference "" subsetdef: Rice "" subsetdef: ro-eco "" subsetdef: RO:0002259 "" subsetdef: Tomato "" subsetdef: TraitNet "" subsetdef: upper_level "" synonymtypedef: acronym "" synonymtypedef: anamorph "" synonymtypedef: blast_name "" synonymtypedef: common_name "" synonymtypedef: equivalent_name "" synonymtypedef: genbank_acronym "" synonymtypedef: genbank_common_name "" synonymtypedef: genbank_synonym "" synonymtypedef: German "" synonymtypedef: in_part "" synonymtypedef: Japanese "" synonymtypedef: Plural "" synonymtypedef: scientific_name "" synonymtypedef: Spanish "" synonymtypedef: synonym "" synonymtypedef: teleomorph "" ontology: pso property_value: http://purl.org/dc/terms/description "An ontology containing biotic and abiotic plant stresses." xsd:string property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/4.0/ property_value: http://purl.org/dc/terms/title "Plant Stress Ontology" xsd:string property_value: owl:versionInfo "2023-11-14" xsd:string [Term] id: BFO:0000001 name: entity [Term] id: BFO:0000002 name: continuant def: "An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts." [] is_a: BFO:0000001 ! entity disjoint_from: BFO:0000003 ! occurrent relationship: part_of BFO:0000002 {all_only="true"} ! continuant relationship: part_of BFO:0000002 ! continuant relationship: RO:0002214 BFO:0000002 ! continuant relationship: RO:HOM0000000 BFO:0000002 ! continuant [Term] id: BFO:0000003 name: occurrent def: "An entity that has temporal parts and that happens, unfolds or develops through time." [] is_a: BFO:0000001 ! entity relationship: part_of BFO:0000003 {all_only="true"} ! occurrent relationship: part_of BFO:0000003 ! occurrent relationship: RO:HOM0000000 BFO:0000003 ! occurrent [Term] id: BFO:0000004 name: independent continuant def: "A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything." [] def: "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])" [] {http://purl.obolibrary.org/obo/IAO_0010000="http://purl.obolibrary.org/obo/bfo/axiom/017-002"} def: "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])" [] comment: A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything. is_a: BFO:0000002 ! continuant disjoint_from: BFO:0000020 ! specifically dependent continuant disjoint_from: BFO:0000031 ! generically dependent continuant relationship: part_of BFO:0000004 {all_only="true"} ! independent continuant relationship: part_of BFO:0000004 ! independent continuant [Term] id: BFO:0000015 name: process def: "An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t." [] def: "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])" [] {http://purl.obolibrary.org/obo/IAO_0010000="http://purl.obolibrary.org/obo/bfo/axiom/083-003"} def: "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])" [] comment: An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. is_a: BFO:0000003 ! occurrent relationship: RO:0002214 BFO:0000015 ! process [Term] id: BFO:0000016 name: disposition is_a: BFO:0000017 ! realizable entity disjoint_from: BFO:0000023 ! role [Term] id: BFO:0000017 name: realizable entity def: "A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances." [] is_a: BFO:0000020 ! specifically dependent continuant disjoint_from: BFO:0000019 ! quality relationship: part_of BFO:0000017 {all_only="true"} ! realizable entity [Term] id: BFO:0000019 name: quality is_a: BFO:0000020 ! specifically dependent continuant relationship: part_of BFO:0000019 {all_only="true"} ! quality [Term] id: BFO:0000020 name: specifically dependent continuant def: "b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])" [] comment: A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same. is_a: BFO:0000002 ! continuant disjoint_from: BFO:0000031 ! generically dependent continuant relationship: part_of BFO:0000020 {all_only="true"} ! specifically dependent continuant [Term] id: BFO:0000023 name: role def: "A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts." [] is_a: BFO:0000017 ! realizable entity [Term] id: BFO:0000031 name: generically dependent continuant def: "b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])" [] comment: A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time. is_a: BFO:0000002 ! continuant relationship: part_of BFO:0000031 {all_only="true"} ! generically dependent continuant [Term] id: BFO:0000034 name: function is_a: BFO:0000016 ! disposition [Term] id: BFO:0000040 name: material entity def: "An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time." [] is_a: BFO:0000004 ! independent continuant [Term] id: GO:0003674 name: molecular_function def: "A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs." [GOC:pdt] comment: Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex. synonym: "molecular function" EXACT [] is_a: BFO:0000015 ! process [Term] id: GO:0003824 name: catalytic activity is_a: GO:0003674 ! molecular_function [Term] id: GO:0008150 name: biological_process def: "A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence." [GOC:pdt] comment: Note that, in addition to forming the root of the biological process ontology, this term is recommended for use for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. synonym: "biological process" EXACT [] synonym: "physiological process" EXACT [] synonym: "single organism process" RELATED [] synonym: "single-organism process" RELATED [] xref: Wikipedia:Biological_process is_a: BFO:0000015 ! process created_by: jl creation_date: 2012-09-19T15:05:24Z [Term] id: GO:0016301 name: kinase activity def: "Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule." [ISBN:0198506732] comment: Note that this term encompasses all activities that transfer a single phosphate group; although ATP is by far the most common phosphate donor, reactions using other phosphate donors are included in this term. synonym: "phosphokinase activity" EXACT [] xref: Reactome:R-HSA-6788855 "FN3KRP phosphorylates PsiAm, RibAm" xref: Reactome:R-HSA-6788867 "FN3K phosphorylates ketosamines" is_a: GO:0016772 ! transferase activity, transferring phosphorus-containing groups [Term] id: GO:0016740 name: transferase activity is_a: GO:0003824 ! catalytic activity [Term] id: GO:0016772 name: transferase activity, transferring phosphorus-containing groups is_a: GO:0016740 ! transferase activity [Term] id: IAO:0000078 name: curation status specification def: "The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value." [] property_value: IAO:0000111 "curation status specification" xsd:string property_value: IAO:0000114 IAO:0000125 property_value: IAO:0000116 "Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)" xsd:string property_value: IAO:0000117 "PERSON:Bill Bug" xsd:string property_value: IAO:0000119 "GROUP:OBI:" xsd:string property_value: IAO:0000119 "OBI_0000266" xsd:string [Term] id: NCBITaxon:1 name: root namespace: ncbi_taxonomy synonym: "all" RELATED synonym [] xref: GC_ID:1 xref: PMID:30365038 xref: PMID:32761142 [Term] id: NCBITaxon:100019 name: Didymella exigua namespace: ncbi_taxonomy synonym: "Cercidospora exigua" RELATED synonym [] synonym: "Didymosphaeria exigua" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:100048 name: Trematosphaeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1208339 ! Trematosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:100050 name: Botryosphaeria quercuum namespace: ncbi_taxonomy alt_id: NCBITaxon:1837844 synonym: "Botryosphaeria quercus" RELATED synonym [] synonym: "Sphaeria quercuum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:45132 ! Botryosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1003146 name: Amphobotrys namespace: ncbi_taxonomy synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1003147 name: Amphobotrys ricini namespace: ncbi_taxonomy alt_id: NCBITaxon:680430 synonym: "Botrytis ricini" RELATED synonym [] synonym: "Sclerotinia ricini" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1003146 ! Amphobotrys property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1003255 name: Viscaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41947 ! Santalales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1003267 name: Psittacantheae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3963 ! Loranthaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1003268 name: Lorantheae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3963 ! Loranthaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1003272 name: Psittacanthinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003267 ! Psittacantheae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1003274 name: Loranthinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003268 ! Lorantheae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1003335 name: Kluyveromyces marxianus DMKU3-1042 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4911 ! Kluyveromyces marxianus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1003877 name: Benincaseae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3650 ! Cucurbitaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1003878 name: Cucurbiteae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3650 ! Cucurbitaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:100755 name: Sweet potato leaf curl virus namespace: ncbi_taxonomy alt_id: NCBITaxon:235162 alt_id: NCBITaxon:240366 alt_id: NCBITaxon:87832 xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:100756 name: Hericium coralloides namespace: ncbi_taxonomy alt_id: NCBITaxon:40460 synonym: "Hericium laciniatum" RELATED synonym [] synonym: "Hericium ramosum" RELATED synonym [] synonym: "Hydnum coralloides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40459 ! Hericium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:100787 name: Verticillium longisporum namespace: ncbi_taxonomy alt_id: NCBITaxon:1608296 synonym: "Verticillium dahliae var. longisporum" RELATED synonym [] synonym: "Verticillium longisporum var. longisporum" RELATED synonym [] xref: GC_ID:1 xref: PMID:21455321 xref: PMID:22174791 is_a: NCBITaxon:1036719 ! Verticillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:100860 name: Aphanomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4764 ! Saprolegniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:100861 name: Aphanomyces euteiches namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:100860 ! Aphanomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:100887 name: Soil-borne cereal mosaic virus namespace: ncbi_taxonomy alt_id: NCBITaxon:87831 synonym: "European wheat mosaic virus" EXACT equivalent_name [] synonym: "soil-borne rye mosaic virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12291 ! Furovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:101091 name: Choanephora cucurbitarum namespace: ncbi_taxonomy alt_id: NCBITaxon:1712118 synonym: "Choanephora cucurbitarum f. cucurbitarum" RELATED synonym [] synonym: "Choanephora infundibulifera f. cucurbitarum" RELATED synonym [] synonym: "Rhopalomyces cucurbitarum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:64498 ! Choanephora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:101094 name: Choanephoraceae namespace: ncbi_taxonomy alt_id: NCBITaxon:4848 synonym: "Gilbertellaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1344963 ! Mucorineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:101095 name: Gilbertella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1344961 ! Gilbertelloideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:101096 name: Gilbertella persicaria namespace: ncbi_taxonomy alt_id: NCBITaxon:1195487 synonym: "Choanephora persicaria" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:101095 ! Gilbertella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:101162 name: Bipolaris oryzae namespace: ncbi_taxonomy alt_id: NCBITaxon:1484600 alt_id: NCBITaxon:2081992 alt_id: NCBITaxon:33195 synonym: "Cochliobolus miyabeanus" RELATED synonym [] synonym: "Drechslera oryzae" RELATED synonym [] synonym: "Helminthosporium oryzae" RELATED synonym [] synonym: "Luttrellia oryzae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:101483 name: Monographella nivalis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:87748 ! Monographella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:101486 name: Phyllachora graminis namespace: ncbi_taxonomy synonym: "Leptostromella graminis" RELATED synonym [] synonym: "Sphaeria graminis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:54961 ! Phyllachora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:101853 name: Pezicula namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:76657 ! Dermateaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:101942 name: Ganoderma tornatum namespace: ncbi_taxonomy synonym: "Polyporus tornatus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:101944 name: Ganoderma zonatum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:102136 name: Peronospora viciae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:102289 name: Anomiidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:114960 ! Anomioidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:102290 name: Anomia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102289 ! Anomiidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10239 name: Viruses namespace: ncbi_taxonomy synonym: "Vira" RELATED synonym [] synonym: "Viridae" RELATED synonym [] synonym: "viruses" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:1 ! root property_value: has_rank NCBITaxon:superkingdom [Term] id: NCBITaxon:102804 name: Asteroideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:18375151 is_a: NCBITaxon:4210 ! Asteraceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:102809 name: Astereae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102804 ! Asteroideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:102810 name: Anthemideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102804 ! Asteroideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:102812 name: Senecioneae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102804 ! Asteroideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:102813 name: Helenieae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:911341 ! Heliantheae alliance property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:102814 name: Heliantheae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:911341 ! Heliantheae alliance property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:102816 name: Mutisieae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:18375151 is_a: NCBITaxon:219102 ! Mutisioideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:102818 name: Cardueae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:219103 ! Carduoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1028384 name: Glomerellales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:222543 ! Hypocreomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1028385 name: Australiascaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1028404 xref: GC_ID:1 is_a: NCBITaxon:1028384 ! Glomerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1028423 name: Ceratocystidaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1028424 xref: GC_ID:1 is_a: NCBITaxon:5592 ! Microascales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:103232 name: Streptomyces ipomoeae namespace: ncbi_taxonomy synonym: "Actinomyces ipomoea" RELATED synonym [] synonym: "Streptomyces ipomoea" RELATED synonym [] xref: GC_ID:11 xref: PMID:21112986 is_a: NCBITaxon:1883 ! Streptomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:103376 name: Stereaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452342 ! Russulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:103393 name: Peniophoraceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452342 ! Russulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1033978 name: Plectosphaerellaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1033979 xref: GC_ID:1 is_a: NCBITaxon:1028384 ! Glomerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1034331 name: Eremothecium gossypii FDAG1 namespace: ncbi_taxonomy synonym: "Ashbya gossypii FDAG1" RELATED synonym [] xref: GC_ID:1 xref: PMID:7662294 is_a: NCBITaxon:33169 ! Eremothecium gossypii property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1036188 name: Puccinia aff. coronata ML-2011 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1036719 name: Verticillium namespace: ncbi_taxonomy alt_id: NCBITaxon:40264 alt_id: NCBITaxon:5106 xref: GC_ID:1 is_a: NCBITaxon:1033978 ! Plectosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1036913 name: Bursaphelenchus sp. st1_10 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2608312 ! unclassified Bursaphelenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1036928 name: Aphelenchoides sp. st1_30 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2607491 ! unclassified Aphelenchoides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1036940 name: Paratrichodorus sp. st5_29 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2646109 ! unclassified Paratrichodorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1036944 name: Trichodorus sp. st7_13 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2625667 ! unclassified Trichodorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1037284 name: Exobasidium sp. agrFF416 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2627151 ! unclassified Exobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1037296 name: Physalospora sp. agrFF592 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2631599 ! unclassified Physalospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:103762 name: Zizania palustris namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:15949 ! Zizania property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:103886 name: Chaetosphaeriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:139960 xref: GC_ID:1 is_a: NCBITaxon:261460 ! Chaetosphaeriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:103887 name: Bionectriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:122652 alt_id: NCBITaxon:159072 alt_id: NCBITaxon:159073 synonym: "anamorphic Bionectriaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1038922 name: Pseudomonas fluorescens Q2-87 namespace: ncbi_taxonomy synonym: "Pseudomonas fluorescens str. Q2-87" EXACT equivalent_name [] synonym: "Pseudomonas fluorescens strain Q2-87" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:294 ! Pseudomonas fluorescens property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1043002 name: Aureobasidium pullulans EXF-150 namespace: ncbi_taxonomy synonym: "Aureobasidium pullulans var. pullulans EXF-150" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5580 ! Aureobasidium pullulans property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:104355 name: Gloeophyllum trabeum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40443 ! Gloeophyllum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:104366 name: Pleurotaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:118174 xref: GC_ID:1 is_a: NCBITaxon:2983527 ! Pleurotineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:104397 name: Epicoccum namespace: ncbi_taxonomy alt_id: NCBITaxon:124082 synonym: "Cerebella" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:104423 name: Drepanoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:104431 ! Obtectomera property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:104425 name: Drepanidae namespace: ncbi_taxonomy synonym: "hook-tip moths" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:104423 ! Drepanoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:104431 name: Obtectomera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37567 ! Ditrysia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1044999 name: Erwinia tracheiphila PSU-1 namespace: ncbi_taxonomy synonym: "Erwinia tracheiphila str. PSU-1" EXACT equivalent_name [] synonym: "Erwinia tracheiphila strain PSU-1" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:65700 ! Erwinia tracheiphila property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1047167 name: Zymoseptoria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1047171 name: Zymoseptoria tritici namespace: ncbi_taxonomy alt_id: NCBITaxon:54734 synonym: "Mycosphaerella graminicola" RELATED synonym [] synonym: "Septoria tritici" RELATED synonym [] synonym: "Sphaeria graminicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1047167 ! Zymoseptoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10508 name: Adenoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732559 ! Rowavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1051613 name: Verticillium alfalfae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:22174791 is_a: NCBITaxon:1036719 ! Verticillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:105180 name: Elettaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4642 ! Zingiberaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1051804 name: Pyrrhulomyces aff. astragalinus PBM2975 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2918219 ! Pyrrhulomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:105181 name: Elettaria cardamomum namespace: ncbi_taxonomy alt_id: NCBITaxon:1515704 synonym: "Amomum cardamomum" RELATED synonym [] synonym: "cardamom" EXACT common_name [] synonym: "cardamon" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:105180 ! Elettaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1053089 name: Dialonectria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1053090 name: Dialonectria episphaeria namespace: ncbi_taxonomy alt_id: NCBITaxon:152772 alt_id: NCBITaxon:57160 synonym: "Cosmospora episphaeria" RELATED synonym [] synonym: "Cucurbitaria episphaeria" RELATED synonym [] synonym: "Fusarium episphaeria" RELATED synonym [] synonym: "Nectria episphaeria" RELATED synonym [] synonym: "Sphaeria episphaeria" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1053089 ! Dialonectria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1053150 name: Microcera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10552 name: Aviadenovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10508 ! Adenoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1055246 name: Septocyta namespace: ncbi_taxonomy synonym: "mitosporic Capnodiales" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:467990 ! Capnodiales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1055247 name: Septocyta ruborum namespace: ncbi_taxonomy synonym: "Ascochyta ruborum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1055246 ! Septocyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:105664 name: Oryza sativa/Pyricularia oryzae mixed EST library namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119167 ! mixed EST libraries property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1056642 name: Curvularia tuberculata namespace: ncbi_taxonomy alt_id: NCBITaxon:1133686 synonym: "Cochliobolus tuberculatus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:105696 name: Epicoccum nigrum namespace: ncbi_taxonomy alt_id: NCBITaxon:115135 alt_id: NCBITaxon:2763897 alt_id: NCBITaxon:582723 synonym: "Epicoccum purpurascens" RELATED synonym [] synonym: "Phoma epicoccina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:104397 ! Epicoccum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:105697 name: Mucor piriformis namespace: ncbi_taxonomy alt_id: NCBITaxon:1196558 xref: GC_ID:1 is_a: NCBITaxon:4830 ! Mucor property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:106218 name: Pectinida namespace: ncbi_taxonomy synonym: "Pectinoida" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:6545 ! Pteriomorphia property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:106263 name: Apiosporaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:190931 xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:106328 name: Coleosporiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:27352 alt_id: NCBITaxon:34415 synonym: "Cronartiaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:10639 name: Caulimovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186534 ! Caulimoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10640 name: Carnation etched ring virus namespace: ncbi_taxonomy synonym: "CERV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3047726 ! Caulimovirus incidianthi [Term] id: NCBITaxon:10641 name: Cauliflower mosaic virus namespace: ncbi_taxonomy synonym: "CAMV" BROAD acronym [] synonym: "cauliflower mosaic virus CaMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3047738 ! Caulimovirus tessellobrassicae [Term] id: NCBITaxon:107450 name: Ascochyta medicaginicola namespace: ncbi_taxonomy synonym: "Phoma medicaginis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1077376 name: Leptosphaeria sclerotioides namespace: ncbi_taxonomy alt_id: NCBITaxon:387323 alt_id: NCBITaxon:859179 alt_id: NCBITaxon:859180 alt_id: NCBITaxon:859181 alt_id: NCBITaxon:859182 alt_id: NCBITaxon:859183 alt_id: NCBITaxon:859184 alt_id: NCBITaxon:859185 synonym: "Leptosphaeria sclerotioides var. sclerotioides" RELATED synonym [] synonym: "Phoma sclerotioides" RELATED synonym [] synonym: "Phoma sclerotioides var. champlainii" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. champlainii (nom. inval.)" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. macrospora" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. macrospora (nom. inval.)" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. obscura (nom. inval.)" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. saskatchewanii (nom. inval.)" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. steubenii (nom. inval.)" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. viridis" EXACT equivalent_name [] synonym: "Phoma sclerotioides var. viridis (nom. inval.)" EXACT equivalent_name [] synonym: "Phoma sp. MJW-2010d" EXACT equivalent_name [] synonym: "Plenodomus sclerotioides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5021 ! Leptosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:107832 name: Thanatephorus cucumeris namespace: ncbi_taxonomy alt_id: NCBITaxon:118239 alt_id: NCBITaxon:29906 alt_id: NCBITaxon:46530 alt_id: NCBITaxon:5239 synonym: "black scurf of potato" EXACT common_name [] synonym: "Corticium praticola" RELATED synonym [] synonym: "Hypochnus cucumeris" RELATED synonym [] synonym: "Thanatephorus praticola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5238 ! Thanatephorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1079060 name: Pseudomonas savastanoi pv. phaseolicola 1644R namespace: ncbi_taxonomy synonym: "Pseudomonas syringae pv. phaseolicola 1644R" RELATED synonym [] synonym: "Pseudomonas syringae pv. phaseolicola str. 1644R" EXACT equivalent_name [] synonym: "Pseudomonas syringae pv. phaseolicola strain 1644R" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:319 ! Pseudomonas savastanoi pv. phaseolicola property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1079112 name: Ilyonectria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:107961 name: Typhula idahoensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:68809 ! Typhula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:108018 name: Cadophora malorum namespace: ncbi_taxonomy alt_id: NCBITaxon:364364 alt_id: NCBITaxon:685540 synonym: "Phialophora malorum" RELATED synonym [] synonym: "Sporotrichum malorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:210567 ! Cadophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1080340 name: Oryza sativa Japonica Group x Oryza sativa Indica Group namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4530 ! Oryza sativa [Term] id: NCBITaxon:1081076 name: Peronosclerospora miscanthi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:230838 ! Peronosclerospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10811 name: Geminiviridae namespace: ncbi_taxonomy synonym: "Geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2732539 ! Geplafuvirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:10812 name: Mastrevirus namespace: ncbi_taxonomy synonym: "Geminivirus subgroup I" EXACT equivalent_name [] synonym: "Subgroup I Geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10811 ! Geminiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10813 name: Curtovirus namespace: ncbi_taxonomy synonym: "Geminivirus subgroup II" EXACT equivalent_name [] synonym: "Subgroup II Geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10811 ! Geminiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10814 name: Begomovirus namespace: ncbi_taxonomy synonym: "Geminivirus subgroup III" EXACT equivalent_name [] synonym: "Subgroup III Geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10811 ! Geminiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10817 name: African cassava mosaic virus namespace: ncbi_taxonomy synonym: "Cassava latent virus" EXACT equivalent_name [] synonym: "cassava mosaic virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10820 name: Chloris striate mosaic virus namespace: ncbi_taxonomy synonym: "CSMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10812 ! Mastrevirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10821 name: Maize streak virus namespace: ncbi_taxonomy synonym: "MSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10812 ! Mastrevirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10827 name: Potato yellow mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10830 name: Tobacco yellow dwarf virus namespace: ncbi_taxonomy synonym: "tobacco yellow dwarf virus TobYDV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10812 ! Mastrevirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:108329 name: Macrophoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10834 name: Wheat dwarf virus namespace: ncbi_taxonomy synonym: "WDV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10812 ! Mastrevirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10838 name: Bean dwarf mosaic virus namespace: ncbi_taxonomy synonym: "bean dwarf mosaic geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10839 name: Bean golden mosaic virus namespace: ncbi_taxonomy synonym: "bean golden mosaic geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10840 name: Beet curly top virus namespace: ncbi_taxonomy synonym: "BCTV" BROAD acronym [] synonym: "beet curly top virus BCTV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10813 ! Curtovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:108533 name: Cryptosporiopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:76657 ! Dermateaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:108569 name: Neofabraea malicorticis namespace: ncbi_taxonomy synonym: "bull's-eye rot" EXACT common_name [] synonym: "Cryptosporiopsis curvispora" RELATED synonym [] synonym: "Cryptosporiopsis malicorticis" RELATED synonym [] synonym: "Gloeosporium malicorticis" RELATED synonym [] synonym: "Pezicula malicorticis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:143937 ! Neofabraea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1086058 name: Gymnosporangium globosum namespace: ncbi_taxonomy synonym: "Aecidium globosum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5265 ! Gymnosporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1086556 name: unclassified Emaravirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675845 ! Emaravirus [Term] id: NCBITaxon:10880 name: Reoviridae is_a: NCBITaxon:2559587 ! Riboviria [Term] id: NCBITaxon:10882 name: Orthoreovirus namespace: ncbi_taxonomy synonym: "RAM-1" BROAD acronym [] synonym: "Reoviruses" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2946187 ! Spinareoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:109360 name: Phyllocoptes namespace: ncbi_taxonomy alt_id: NCBITaxon:70330 xref: GC_ID:1 is_a: NCBITaxon:426517 ! Phyllocoptini property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:109368 name: Phyllocoptes gracilis namespace: ncbi_taxonomy alt_id: NCBITaxon:70331 xref: GC_ID:1 is_a: NCBITaxon:109360 ! Phyllocoptes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:109374 name: Nemania namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37990 ! Xylariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:109377 name: Ustulina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37990 ! Xylariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:109384 name: Sclerotium namespace: ncbi_taxonomy alt_id: NCBITaxon:109383 alt_id: NCBITaxon:180467 alt_id: NCBITaxon:38491 alt_id: NCBITaxon:5565 synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:68808 ! Typhulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1095762 name: Sclerotinia sclerotiorum WM-A1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5180 ! Sclerotinia sclerotiorum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1095956 name: Sclerotinia trifoliorum 06CWM-G47 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28548 ! Sclerotinia trifoliorum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1096705 name: Penicillium aff. janthinellum P43 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1096988 name: Aspergillus aff. fumigatus P8 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2720872 ! Aspergillus subgen. Fumigati property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1097556 name: Taphrina deformans PYCC 5710 namespace: ncbi_taxonomy synonym: "Taphrina deformans CBS 356.35" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5011 ! Taphrina deformans property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:10985 name: Phytoreovirus namespace: ncbi_taxonomy synonym: "plant reovirus 1" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:2946186 ! Sedoreoviridae is_a: NCBITaxon:689832 ! Sedoreovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10987 name: Wound tumor virus namespace: ncbi_taxonomy synonym: "wound tumor virus, WTV" EXACT equivalent_name [] synonym: "WTV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10985 ! Phytoreovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:109873 name: Physodermataceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2202804 ! Physodermatales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:109874 name: Physoderma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:109873 ! Physodermataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10988 name: Fijivirus namespace: ncbi_taxonomy synonym: "plant reovirus 2" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:2946187 ! Spinareoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:10989 name: Maize rough dwarf virus namespace: ncbi_taxonomy alt_id: NCBITaxon:984915 synonym: "Maize rough dwarf fijivirus" EXACT equivalent_name [] synonym: "MRDV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10988 ! Fijivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10990 name: Rice black streaked dwarf virus namespace: ncbi_taxonomy synonym: "RBSDV" BROAD acronym [] synonym: "Rice black-streaked dwarf virus" EXACT equivalent_name [] synonym: "rice black-streaked dwarf virus RBSDV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10988 ! Fijivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10991 name: Rice dwarf virus namespace: ncbi_taxonomy synonym: "RDV" BROAD acronym [] synonym: "rice dwarf phytoreovirus" EXACT equivalent_name [] synonym: "rice dwarf phytoreovirus RDV" EXACT equivalent_name [] synonym: "rice dwarf virus RDV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10985 ! Phytoreovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:10992 name: Oryzavirus namespace: ncbi_taxonomy synonym: "Plant reovirus subgroup 3" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2946187 ! Spinareoviridae is_a: NCBITaxon:689831 ! Spinareovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:11012 name: Partitiviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732549 ! Durnavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1101366 name: Saccharomyces cerevisiae/Pachysolen tannophilus fusant namespace: ncbi_taxonomy synonym: "Saccharomyces cerevisiae/ Pachysolen tannophilus fusant" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:311473 ! unclassified Saccharomycetales property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:110162 name: Oculimacula acuformis namespace: ncbi_taxonomy synonym: "Helgardia acuformis" RELATED synonym [] synonym: "Mollisia acuformis" RELATED synonym [] synonym: "Pseudocercosporella herpotrichoides var. acuformis" RELATED synonym [] synonym: "Ramulispora acuformis" RELATED synonym [] synonym: "Ramulispora herpotrichoides var. acuformis" RELATED synonym [] synonym: "Tapesia acuformis" RELATED synonym [] synonym: "Tapesia yallundae var. acuformis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:228665 ! Oculimacula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:110364 name: Stemphylium solani namespace: ncbi_taxonomy alt_id: NCBITaxon:1812910 synonym: "Thyrospora solani" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:95729 ! Stemphylium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1104326 name: Enterobacter cloacae subsp. dissolvens SDM namespace: ncbi_taxonomy synonym: "Enterobacter cloacae subsp. dissolvens str. SDM" EXACT equivalent_name [] synonym: "Enterobacter cloacae subsp. dissolvens strain SDM" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:69219 ! Enterobacter cloacae subsp. dissolvens property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:110526 name: Ustulina deusta namespace: ncbi_taxonomy alt_id: NCBITaxon:109378 alt_id: NCBITaxon:1181149 synonym: "Kretzschmaria deusta" RELATED synonym [] synonym: "Sphaeria deusta" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:109377 ! Ustulina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:110534 name: Biscogniauxia marginata namespace: ncbi_taxonomy synonym: "Sphaeria marginata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:97376 ! Biscogniauxia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:110564 name: Clonostachys namespace: ncbi_taxonomy alt_id: NCBITaxon:122407 alt_id: NCBITaxon:160268 synonym: "Bionectria" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:103887 ! Bionectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:110618 name: Nectriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:307520 xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:110932 name: Leifsonia namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:10826825 xref: PMID:12501368 xref: PMID:18768634 xref: PMID:19126716 is_a: NCBITaxon:85023 ! Microbacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1111077 name: Claviceps purpurea 20.1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5111 ! Claviceps purpurea property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1111111 name: Venturiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451868 ! Pleosporomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1111112 name: Sympoventuriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1111113 xref: GC_ID:1 is_a: NCBITaxon:1111111 ! Venturiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:111171 name: Phytophthora erythroseptica namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:11157 name: Mononegavirales namespace: ncbi_taxonomy synonym: "negative-sense genome single-stranded RNA viruses" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:2497574 ! Monjiviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1115744 name: Physaraceae namespace: ncbi_taxonomy synonym: "Physaridae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5789 ! Physariida property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1116232 name: Streptomyces acidiscabies 84-104 namespace: ncbi_taxonomy synonym: "Streptomyces acidiscabies str. 84-104" EXACT equivalent_name [] synonym: "Streptomyces acidiscabies strain 84-104" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:22408247 is_a: NCBITaxon:42234 ! Streptomyces acidiscabies property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1116674 name: Sphingomonas sp. alfa40b-PCA-E3-2 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:196159 ! unclassified Sphingomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1118950 name: Peltella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:213563 ! Bulimulidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:112027 name: Achlya conspicua namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4765 ! Achlya property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:112091 name: Aphanomyces cochlioides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:100860 ! Aphanomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:112171 name: Curvularia trifolii namespace: ncbi_taxonomy alt_id: NCBITaxon:2052557 synonym: "Brachysporium trifolii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:112177 name: Arthrinium namespace: ncbi_taxonomy alt_id: NCBITaxon:190938 xref: GC_ID:1 is_a: NCBITaxon:106263 ! Apiosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:112252 name: Fungi incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:451834 xref: GC_ID:1 is_a: NCBITaxon:4751 ! Fungi [Term] id: NCBITaxon:1122914 name: Epicoccum nigrum P16 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:105696 ! Epicoccum nigrum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:112407 name: Cuscuta pentagona namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824901 ! Cuscuta sect. Cleistogrammica property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:112436 name: Celery mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:112437 name: Oat necrotic mottle virus namespace: ncbi_taxonomy synonym: "ONMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:156207 ! Tritimovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:112497 name: Ramularia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1125743 name: Coniella fragariae namespace: ncbi_taxonomy synonym: "Clisosporium fragariae" RELATED synonym [] synonym: "Coniothyrium fragariae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:172190 ! Coniella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1125789 name: Elsinoe brasiliensis namespace: ncbi_taxonomy synonym: "Elsinoe brasiliensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40996 ! Elsinoe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1125792 name: Elsinoe arachidis namespace: ncbi_taxonomy synonym: "Sphaceloma arachidis" RELATED synonym [] xref: GC_ID:1 xref: PMID:28373739 is_a: NCBITaxon:40996 ! Elsinoe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1126212 name: Macrophomina phaseolina MS6 namespace: ncbi_taxonomy synonym: "Macrophomina phaseolina str. MS6" EXACT equivalent_name [] synonym: "Macrophomina phaseolina strain MS6" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:35725 ! Macrophomina phaseolina property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:11270 name: Rhabdoviridae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:16186241 is_a: NCBITaxon:11157 ! Mononegavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1127528 name: Aecidium sp. cui-1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2626141 ! unclassified Aecidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1127707 name: Ganoderma lucidum Xiangnong No.1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5315 ! Ganoderma lucidum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1128400 name: Ustilago hordei Uh4857-4 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:120017 ! Ustilago hordei property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:11305 name: Cytorhabdovirus namespace: ncbi_taxonomy synonym: "Plant rhabdovirus subgroup A" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2842408 ! Betarhabdovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1131492 name: Aspergillaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5042 ! Eurotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1131624 name: Thermoascaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5042 ! Eurotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:113197 name: Cuscuta glomerata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824904 ! Cuscuta sect. Oxycarpae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1137139 name: Pleurotus ostreatus PC9 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5322 ! Pleurotus ostreatus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1141409 name: Corynebacterium sp. mare20 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2624378 ! unclassified Corynebacterium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1141493 name: Caryophylleae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3568 ! Caryophyllaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1142151 name: Cerrena unicolor 303 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:90312 ! Cerrena unicolor property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1142162 name: Trametes versicolor 84 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5325 ! Trametes versicolor property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:114230 name: Nigrospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:106263 ! Apiosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:114231 name: Nigrospora sphaerica namespace: ncbi_taxonomy alt_id: NCBITaxon:1460876 alt_id: NCBITaxon:2047961 xref: GC_ID:1 is_a: NCBITaxon:114230 ! Nigrospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:114893 name: Tylenchidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:114894 name: Anguininae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:114907 ! Anguinidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:114896 name: Subanguina namespace: ncbi_taxonomy alt_id: NCBITaxon:185622 synonym: "Mesoanguina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:114894 ! Anguininae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:114906 name: Subanguina radicicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:114896 ! Subanguina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:114907 name: Anguinidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:312687 ! Sphaerularioidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:114921 name: Beet mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:114960 name: Anomioidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:106218 ! Pectinida property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:1149898 name: Monascus purpureus NRRL 1596 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5098 ! Monascus purpureus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1149930 name: Brevicellicium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1229510 ! Hydnodontaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1149931 name: Brevicellicium olivascens namespace: ncbi_taxonomy synonym: "Odontia olivascens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1149930 ! Brevicellicium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1150412 name: Cercospora longissima namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:115417 name: Globisporangium iwayamae namespace: ncbi_taxonomy synonym: "Pythium iwayamae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:115419 name: Globisporangium paddicum namespace: ncbi_taxonomy synonym: "Pythium paddicum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:115420 name: Globisporangium pulchrum namespace: ncbi_taxonomy synonym: "Pythium pulchrum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1154578 name: Meloidogyne cruciani namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1155947 name: Monascus ruber NRRL 1597 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:89489 ! Monascus ruber property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1156156 name: Phacidiopycnis sp. stklk7 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2626222 ! unclassified Phacidiopycnis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1156497 name: Pichiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4892 ! Saccharomycetales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:115718 name: Peronospora pisi namespace: ncbi_taxonomy synonym: "Peronospora viciae f. sp. pisi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:115784 name: Phaffomycetaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:599729 synonym: "Wickerhamomycetaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4892 ! Saccharomycetales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1159556 name: Ustilaginoidea virens namespace: ncbi_taxonomy alt_id: NCBITaxon:124427 synonym: "Claviceps virens" RELATED synonym [] synonym: "Ustilago virens" RELATED synonym [] synonym: "Villosiclava virens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:124426 ! Ustilaginoidea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1159853 name: unclassified Solanaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4070 ! Solanaceae [Term] id: NCBITaxon:1160497 name: Aspergillus glaucus CBS 516.65 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41413 ! Aspergillus glaucus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:11612 name: Impatiens necrotic spot virus namespace: ncbi_taxonomy synonym: "Impatiens necrotic spot virus INSV" EXACT equivalent_name [] synonym: "INSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3052576 ! Orthotospovirus impatiensnecromaculae [Term] id: NCBITaxon:116704 name: Eubrachyura namespace: ncbi_taxonomy alt_id: NCBITaxon:6795 xref: GC_ID:1 is_a: NCBITaxon:6752 ! Brachyura [Term] id: NCBITaxon:116706 name: Heterotremata namespace: ncbi_taxonomy alt_id: NCBITaxon:29963 alt_id: NCBITaxon:6773 alt_id: NCBITaxon:6803 synonym: "Brachyrhyncha" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:116704 ! Eubrachyura [Term] id: NCBITaxon:1168852 name: environmental Halophage eHP-E5 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2960393 ! unclassified Haloferuviridae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1170405 name: Corallomycetella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1170406 name: Corallomycetella repens namespace: ncbi_taxonomy alt_id: NCBITaxon:57156 alt_id: NCBITaxon:913591 synonym: "Corallomyces mauritiicola" RELATED synonym [] synonym: "Nectria mauritiicola" RELATED synonym [] synonym: "Rhizostilbella hibisci" RELATED synonym [] synonym: "Sphaerostilbe repens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1170405 ! Corallomycetella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:117174 name: Ustilago tritici namespace: ncbi_taxonomy synonym: "Lycoperdon tritici" RELATED synonym [] synonym: "Ustilago segetum var. tritici" RELATED synonym [] synonym: "Ustilago segetum var. tritici (Pers.) Brunaud, 1878" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5269 ! Ustilago property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:117187 name: Fusarium verticillioides namespace: ncbi_taxonomy alt_id: NCBITaxon:1335946 alt_id: NCBITaxon:2773093 alt_id: NCBITaxon:42664 synonym: "Fusarium moniliforme" RELATED synonym [] synonym: "Fusarium moniliforme J. Sheld., 1904" RELATED synonym [] synonym: "Gibberella moniliformis" RELATED teleomorph [] synonym: "Oospora verticillioides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1173043 name: Trachysphaera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1173048 ! Trachysphaeridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1173048 name: Trachysphaeridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62004 ! Glomerida property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1173061 name: Geotrichum candidum namespace: ncbi_taxonomy alt_id: NCBITaxon:1081645 alt_id: NCBITaxon:2282360 alt_id: NCBITaxon:27317 alt_id: NCBITaxon:426520 alt_id: NCBITaxon:426521 synonym: "Dipodascus geotrichum" RELATED synonym [] synonym: "Endomyces geotrichum" RELATED synonym [] synonym: "Galactomyces candidus" RELATED synonym [] synonym: "Galactomyces candidus de Hoog & M.T. Smith, 2004" RELATED synonym [] synonym: "Galactomyces geotrichum (E.E. Butler & L.J. Petersen) Redhead & Malloch, 1977" RELATED synonym [] synonym: "Oospora lactis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:43987 ! Geotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1173701 name: Colletotrichum sublineola namespace: ncbi_taxonomy alt_id: NCBITaxon:34410 synonym: "Colletotrichum sublineola Henn. ex Sacc. & Trotter, 1913" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2707348 ! Colletotrichum graminicola species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:117544 name: Cytospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5117 ! Valsaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:117570 name: Teleostomi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7776 ! Gnathostomata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:117571 name: Euteleostomi namespace: ncbi_taxonomy alt_id: NCBITaxon:40673 synonym: "bony vertebrates" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:117570 ! Teleostomi property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1176462 name: Asperisporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1176465 name: Asperisporium caricae namespace: ncbi_taxonomy synonym: "Cercospora caricae" RELATED synonym [] synonym: "Fusicladium caricae" RELATED synonym [] synonym: "Pucciniopsis caricae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1176462 ! Asperisporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1176514 name: Burkholderia glumae AU6208 namespace: ncbi_taxonomy synonym: "Burkholderia glumae str. AU6208" EXACT equivalent_name [] synonym: "Burkholderia glumae strain AU6208" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:337 ! Burkholderia glumae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1176516 name: Rosoideae incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:171638 ! Rosoideae [Term] id: NCBITaxon:118027 name: Nelson Bay orthoreovirus namespace: ncbi_taxonomy alt_id: NCBITaxon:75887 synonym: "Nelson bay reovirus" EXACT equivalent_name [] synonym: "Nelson Bay virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10882 ! Orthoreovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:118259 name: Plenodomus namespace: ncbi_taxonomy alt_id: NCBITaxon:37464 xref: GC_ID:1 is_a: NCBITaxon:34374 ! Leptosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1182844 name: Caliothrips namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:153977 ! Panchaetothripinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1183193 name: Puccinia graminis f. sp. tritici 87KEN3018-4 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:56615 ! Puccinia graminis f. sp. tritici property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1183400 name: Agrobacterium tumefaciens complex namespace: ncbi_taxonomy synonym: "Agrobacterium biovar 1" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:357 ! Agrobacterium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:1184124 name: Fragariinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:721789 ! Potentilleae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:118560 name: Pentazonia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7553 ! Diplopoda property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:1187927 name: Alternaria humuli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2499258 ! Alternaria sect. Infectoriae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:119060 name: Burkholderiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:119063 synonym: "Burkholderia group" RELATED synonym [] xref: GC_ID:11 xref: PMID:16403855 is_a: NCBITaxon:80840 ! Burkholderiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:119088 name: Enoplea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6231 ! Nematoda property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:119089 name: Chromadorea namespace: ncbi_taxonomy alt_id: NCBITaxon:27837 synonym: "Adenophorea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:6231 ! Nematoda property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:119163 name: Luteoviridae is_a: NCBITaxon:2559587 ! Riboviria [Term] id: NCBITaxon:119164 name: Polerovirus namespace: ncbi_taxonomy synonym: "Betaluteovirus" EXACT equivalent_name [] synonym: "luteovirus subgroup II" EXACT equivalent_name [] synonym: "Potleavirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2169577 ! Solemoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:119167 name: mixed EST libraries namespace: ncbi_taxonomy synonym: "mixed EST libraries" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:42452 ! unclassified eukaryotes property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1194211 name: Wickerhamomyces subpelliculosus namespace: ncbi_taxonomy alt_id: NCBITaxon:36030 synonym: "Hansenula subpelliculosa" RELATED synonym [] synonym: "Pichia subpelliculosa" RELATED synonym [] synonym: "Wickerhamomyces subpelliculosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:599737 ! Wickerhamomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1194542 name: Cassava witches'-broom phytoplasma namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:85621 ! 16SrII (Peanut WB group) property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1195162 name: unclassified Anulavirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:413970 ! Anulavirus [Term] id: NCBITaxon:1196582 name: Dendrophoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:701155 ! Chaetosphaeriales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1198219 name: Sweet potato leaf curl China virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1198317 name: Pseudomonas marginalis ICMP 9505 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:298 ! Pseudomonas marginalis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:11986 name: Carnation mottle virus namespace: ncbi_taxonomy synonym: "CarMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3047728 ! Alphacarmovirus dianthi [Term] id: NCBITaxon:11988 name: Turnip crinkle virus namespace: ncbi_taxonomy synonym: "TCV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3048437 ! Betacarmovirus brassicae [Term] id: NCBITaxon:119919 name: Alternaria japonica namespace: ncbi_taxonomy alt_id: NCBITaxon:33193 synonym: "Alternaria raphani" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499259 ! Alternaria sect. Japonicae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:119927 name: Alternaria tenuissima namespace: ncbi_taxonomy alt_id: NCBITaxon:1245774 alt_id: NCBITaxon:1245785 alt_id: NCBITaxon:1403605 alt_id: NCBITaxon:1704140 alt_id: NCBITaxon:1862904 alt_id: NCBITaxon:2048498 alt_id: NCBITaxon:2283412 alt_id: NCBITaxon:509244 alt_id: NCBITaxon:631442 synonym: "Helminthosporium tenuissimum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:187734 ! Alternaria alternata complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:119929 name: Exserohilum pedicellatum namespace: ncbi_taxonomy alt_id: NCBITaxon:230005 synonym: "Bipolaris pedicellata" RELATED synonym [] synonym: "Drechslera pedicellata" RELATED synonym [] synonym: "Helminthosporium pedicellatum" RELATED synonym [] synonym: "Setosphaeria pedicellata" RELATED synonym [] synonym: "Trichometasphaeria pedicellata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:91493 ! Exserohilum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:119933 name: Stemphylium vesicarium namespace: ncbi_taxonomy alt_id: NCBITaxon:1571747 alt_id: NCBITaxon:162404 alt_id: NCBITaxon:2005006 alt_id: NCBITaxon:2005008 alt_id: NCBITaxon:2005010 alt_id: NCBITaxon:235068 alt_id: NCBITaxon:235071 alt_id: NCBITaxon:33177 alt_id: NCBITaxon:95730 alt_id: NCBITaxon:95731 synonym: "Helminthosporium vesicarium" RELATED synonym [] synonym: "Helmisporium vesicarium" RELATED synonym [] synonym: "Macrosporium vesicarium" RELATED synonym [] synonym: "Pleospora alfalfae" RELATED synonym [] synonym: "Pleospora herbarum" RELATED synonym [] synonym: "Pleospora herbarum var. herbarum" RELATED synonym [] synonym: "Pleospora pomorum" RELATED synonym [] synonym: "Pleospora sedicola" RELATED synonym [] synonym: "Pleospora tomatonis" RELATED synonym [] synonym: "Sphaeria herbarum" RELATED synonym [] synonym: "Stemphylium alfalfae" RELATED synonym [] synonym: "Stemphylium brassicicola" RELATED synonym [] synonym: "Stemphylium cremanthodii" RELATED synonym [] synonym: "Stemphylium herbarum" RELATED synonym [] synonym: "Stemphylium sedicola" RELATED synonym [] synonym: "Stemphylium tomatonis" RELATED synonym [] xref: GC_ID:1 xref: PMID:28663603 is_a: NCBITaxon:95729 ! Stemphylium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:119934 name: Stemphylium sarciniforme namespace: ncbi_taxonomy synonym: "Macrosporium sarciniforme" RELATED synonym [] synonym: "Stemphylium sarcinaeforme" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:95729 ! Stemphylium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:119947 name: Alternaria sect. Ulocladium namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:119953 name: Alternaria atra namespace: ncbi_taxonomy synonym: "Ulocladium atrum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499266 ! Alternaria sect. Ulocladioides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:120017 name: Ustilago hordei namespace: ncbi_taxonomy alt_id: NCBITaxon:117170 alt_id: NCBITaxon:117173 alt_id: NCBITaxon:119851 alt_id: NCBITaxon:120013 alt_id: NCBITaxon:5273 alt_id: NCBITaxon:86803 synonym: "Ustilago kolleri" RELATED synonym [] synonym: "Ustilago segetum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5269 ! Ustilago property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1202531 name: Verticillium dahliae JR2 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:27337 ! Verticillium dahliae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:12036 name: Luteovirus namespace: ncbi_taxonomy synonym: "Luteovirus subgroup I" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:119163 ! Luteoviridae is_a: NCBITaxon:39738 ! Tombusviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12037 name: Barley yellow dwarf virus namespace: ncbi_taxonomy synonym: "barley yellow dwarf virus BYDV" EXACT equivalent_name [] synonym: "barley yellow dwarf virus, BYDV" EXACT equivalent_name [] synonym: "BYDV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:368617 ! unclassified Luteovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12041 name: Bean leafroll virus namespace: ncbi_taxonomy synonym: "Bean leaf roll virus" EXACT equivalent_name [] synonym: "BLRV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3047676 ! Luteovirus phaseoli [Term] id: NCBITaxon:12042 name: Beet western yellows virus namespace: ncbi_taxonomy synonym: "Beet western yellow virus" EXACT equivalent_name [] synonym: "BWYV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:119164 ! Polerovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12045 name: Potato leafroll virus namespace: ncbi_taxonomy synonym: "PLRV" BROAD acronym [] synonym: "Potato leaf roll virus" EXACT equivalent_name [] synonym: "Potato leaf-roll virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:119164 ! Polerovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1204556 name: Albugo candida Ac 2V namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:65357 ! Albugo candida property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:12049 name: Soybean dwarf virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3048322 ! Luteovirus glycinis [Term] id: NCBITaxon:120490 name: Eupulmonata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:977775 ! Panpulmonata property_value: has_rank NCBITaxon:superorder [Term] id: NCBITaxon:12051 name: Marafivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:249184 ! Tymoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:120510 name: Stemphylium botryosum namespace: ncbi_taxonomy synonym: "Pleospora tarda" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:95729 ! Stemphylium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:120650 name: Ustilago avenae namespace: ncbi_taxonomy synonym: "Ustilago aegilopsidis" RELATED synonym [] synonym: "Ustilago nigra" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5269 ! Ustilago property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1206794 name: Ecdysozoa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33317 ! Protostomia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1206795 name: Lophotrochozoa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2697495 ! Spiralia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1208339 name: Trematosphaeriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1255046 ! Massarineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:120862 name: Aphelenchoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33283 ! Tylenchomorpha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:121069 name: Pythiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4762 ! Oomycota property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1211001 name: Parastagonospora nodorum Sn4 namespace: ncbi_taxonomy synonym: "Phaeosphaeria nodorum Sn4" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:13684 ! Parastagonospora nodorum property_value: has_rank NCBITaxon:isolate [Term] id: NCBITaxon:12137 name: Sobemovirus namespace: ncbi_taxonomy alt_id: NCBITaxon:12469 synonym: "Velvet tobacco mottle virus group" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2169577 ! Solemoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12139 name: Southern bean mosaic virus namespace: ncbi_taxonomy synonym: "SBMV" BROAD acronym [] synonym: "southern bean mosaic virus, SBMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12137 ! Sobemovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12141 name: Tombusvirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2560077 ! Procedovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12145 name: Tomato bushy stunt virus namespace: ncbi_taxonomy synonym: "TBSV" BROAD acronym [] synonym: "tomato bushy stunt tombusvirus TBSV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3048374 ! Tombusvirus lycopersici [Term] id: NCBITaxon:1214568 name: Diaporthe amygdali namespace: ncbi_taxonomy alt_id: NCBITaxon:83182 synonym: "Fusicoccum amygdali" RELATED synonym [] synonym: "Phomopsis amygdali" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12148 name: Tymovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:249184 ! Tymoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12160 name: Closterovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:69973 ! Closteroviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12161 name: Beet yellows virus namespace: ncbi_taxonomy alt_id: NCBITaxon:31714 alt_id: NCBITaxon:31775 synonym: "BYV" BROAD acronym [] synonym: "SBYV" BROAD acronym [] synonym: "Sugar beet yellows virus" RELATED synonym [] synonym: "sugar beet yellows virus, SBYV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12160 ! Closterovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12162 name: Citrus tristeza virus namespace: ncbi_taxonomy synonym: "Citrus tristeza closterovirus" EXACT equivalent_name [] synonym: "citrus tristeza closterovirus CTV" EXACT equivalent_name [] synonym: "citrus tristeza virus CTV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12160 ! Closterovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:121621 name: Phyllosticta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1424649 ! Phyllostictaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:121624 name: Phyllosticta capitalensis namespace: ncbi_taxonomy alt_id: NCBITaxon:1002998 alt_id: NCBITaxon:122092 alt_id: NCBITaxon:2306440 synonym: "Guignardia endophyllicola" RELATED synonym [] synonym: "Guignardia mangiferae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:121621 ! Phyllosticta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12163 name: Carlavirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1914297 ! Quinvirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12164 name: Carnation latent virus namespace: ncbi_taxonomy synonym: "CLV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12167 name: Potato virus M namespace: ncbi_taxonomy synonym: "PVM" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12169 name: Potato virus S namespace: ncbi_taxonomy synonym: "Pepino latent virus" EXACT equivalent_name [] synonym: "potato virus S PVS" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12172 name: Shallot latent virus namespace: ncbi_taxonomy synonym: "Shallot latent carlavirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12174 name: Capillovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1914298 ! Trivirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12175 name: Apple chlorotic leaf spot virus namespace: ncbi_taxonomy synonym: "ACLSV" BROAD acronym [] synonym: "Apple chlorotic leaf spot trichovirus" EXACT equivalent_name [] synonym: "apple chlorotic leaf spot virus ACLSV-A" EXACT equivalent_name [] synonym: "Apple chlorotic leafspot virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:40276 ! Trichovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12176 name: Potexvirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675064 ! Alphaflexiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12177 name: Clover yellow mosaic virus namespace: ncbi_taxonomy synonym: "Clover yellow mosaic potexvirus" EXACT equivalent_name [] synonym: "CYMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12176 ! Potexvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12178 name: Cymbidium mosaic virus namespace: ncbi_taxonomy synonym: "Cymbidium mosaic potexvirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12176 ! Potexvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12181 name: Papaya mosaic virus namespace: ncbi_taxonomy synonym: "Papaya mosaic potexvirus" EXACT equivalent_name [] synonym: "PMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12176 ! Potexvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12182 name: Potato aucuba mosaic virus namespace: ncbi_taxonomy synonym: "PAMV" BROAD acronym [] synonym: "potato aucuba mosaic potexvirus" EXACT equivalent_name [] synonym: "potato aucuba mosaic potexvirus PAMV" EXACT equivalent_name [] synonym: "potato aucuba mosaic virus PAMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12176 ! Potexvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12183 name: Potato virus X namespace: ncbi_taxonomy synonym: "potato virus X, PVX" EXACT equivalent_name [] synonym: "PVX" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12176 ! Potexvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1218708 name: Penicillium chrysogenum KF-25 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5076 ! Penicillium chrysogenum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:12188 name: White clover mosaic virus namespace: ncbi_taxonomy synonym: "WClMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12176 ! Potexvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1218802 name: Phomopsis ipomoeae-batatas namespace: ncbi_taxonomy synonym: "Depazea batatas" RELATED synonym [] synonym: "Phyllosticta batatas" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34399 ! Phomopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12195 name: Potyvirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39729 ! Potyviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12196 name: Bean common mosaic virus namespace: ncbi_taxonomy synonym: "BCMV" BROAD acronym [] synonym: "bean common mosaic virus BCMV" EXACT equivalent_name [] synonym: "bean common mosaic virus, BCMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12197 name: Bean yellow mosaic virus namespace: ncbi_taxonomy alt_id: NCBITaxon:36398 synonym: "bean yellow mosaic potyvirus" EXACT equivalent_name [] synonym: "bean yellow mosaic virus BYMV" EXACT equivalent_name [] synonym: "bean yellow mosaic virus, BYMV" EXACT equivalent_name [] synonym: "BYMV" BROAD acronym [] synonym: "pea mosaic potyvirus PMV-I" EXACT equivalent_name [] synonym: "Pea mosaic virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12198 name: Clover yellow vein virus namespace: ncbi_taxonomy synonym: "clover yellow vein potyvirus" EXACT equivalent_name [] synonym: "clover yellow vein virus CYVV" EXACT equivalent_name [] synonym: "ClYVV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12199 name: Cowpea aphid-borne mosaic virus namespace: ncbi_taxonomy synonym: "adzuki bean mosaic virus" EXACT equivalent_name [] synonym: "CABMV" BROAD acronym [] synonym: "Cowpea aphid-borne mosaic potyvirus" EXACT equivalent_name [] synonym: "cowpea Moroccan aphid-borne mosaic virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12200 name: Garlic mosaic virus namespace: ncbi_taxonomy synonym: "garlic mosaic virus, GarMV" EXACT equivalent_name [] synonym: "GarMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:42004 ! Leek yellow stripe virus [Term] id: NCBITaxon:12202 name: Lettuce mosaic virus namespace: ncbi_taxonomy synonym: "Lettuce mosaic potyvirus" EXACT equivalent_name [] synonym: "Lettuce mosaic potyvirus (LMV)" EXACT equivalent_name [] synonym: "lettuce mosaic virus, LMV" EXACT equivalent_name [] synonym: "LMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12205 name: Papaya ringspot virus namespace: ncbi_taxonomy synonym: "Papaya ring spot virus" EXACT equivalent_name [] synonym: "papaya ringspot potyvirus" EXACT equivalent_name [] synonym: "papaya ringspot virus PRSV" EXACT equivalent_name [] synonym: "papaya ringspot virus, PRSV" EXACT equivalent_name [] synonym: "PRSV" BROAD acronym [] synonym: "watermelon mosaic virus 1" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12208 name: Pea seed-borne mosaic virus namespace: ncbi_taxonomy synonym: "pea seed-borne mosaic potyvirus" EXACT equivalent_name [] synonym: "PSbMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12209 name: Pepper mottle virus namespace: ncbi_taxonomy synonym: "PEMV" BROAD acronym [] synonym: "pepper mottle virus PepMoV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12211 name: Plum pox virus namespace: ncbi_taxonomy synonym: "Plum pox potyvirus" EXACT equivalent_name [] synonym: "plum pox virus PPV" EXACT equivalent_name [] synonym: "plum pox virus, PPV" EXACT equivalent_name [] synonym: "PPV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12215 name: Potato virus A namespace: ncbi_taxonomy synonym: "Potato A potyvirus" EXACT equivalent_name [] synonym: "potato virus A PVA" EXACT equivalent_name [] synonym: "potato virus A, PVA" EXACT equivalent_name [] synonym: "PVA" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1221544 name: Oidium sp. pm-103 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2620159 ! unclassified Oidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12222 name: Soybean mosaic virus namespace: ncbi_taxonomy synonym: "SbMV" BROAD acronym [] synonym: "soybean mosaic virus SMV" EXACT equivalent_name [] synonym: "soybean mosaic virus, SbMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12224 name: Sugarcane mosaic virus namespace: ncbi_taxonomy synonym: "SCMV" BROAD acronym [] synonym: "sugarcane mosaic potyvirus" EXACT equivalent_name [] synonym: "sugarcane mosaic virus SCMV" EXACT equivalent_name [] synonym: "sugarcane mosaic virus, SCMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12227 name: Tobacco etch virus namespace: ncbi_taxonomy synonym: "TEV" BROAD acronym [] synonym: "tobacco etch potyvirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:122277 name: Pectobacterium namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:11155980 xref: PMID:9779605 is_a: NCBITaxon:1903410 ! Pectobacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12228 name: Tobacco vein mottling virus namespace: ncbi_taxonomy synonym: "tobacco vein mottling virus (TVMV)" EXACT equivalent_name [] synonym: "TVMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12233 name: South African passiflora virus namespace: ncbi_taxonomy synonym: "South African passiflora virus SAPV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12199 ! Cowpea aphid-borne mosaic virus [Term] id: NCBITaxon:12234 name: Tobamovirus namespace: ncbi_taxonomy synonym: "Tobamoviridae" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:675071 ! Virgaviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12235 name: Cucumber green mottle mosaic virus namespace: ncbi_taxonomy synonym: "CCGMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12234 ! Tobamovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1223555 name: Pythium aphanidermatum DAOM BR444 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:65070 ! Pythium aphanidermatum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1223557 name: Globisporangium irregulare DAOM BR486 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36331 ! Globisporangium irregulare property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1223560 name: Phytopythium vexans DAOM BR484 namespace: ncbi_taxonomy synonym: "Pythium vexans DAOM BR484" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:907947 ! Phytopythium vexans property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1223571 name: Dickeya chrysanthemi NCPPB 516 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:556 ! Dickeya chrysanthemi property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:122368 name: Cercospora beticola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12238 name: Odontoglossum ringspot virus namespace: ncbi_taxonomy synonym: "Odontoglossum ringspot tobamovirus" EXACT equivalent_name [] synonym: "ORSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12234 ! Tobamovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12239 name: Pepper mild mottle virus namespace: ncbi_taxonomy synonym: "pepper mild mottle virus PMMV-S" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12234 ! Tobamovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1224 name: Proteobacteria name: Pseudomonadota namespace: ncbi_taxonomy synonym: "\"Alphaproteobacteriota\" Whitman et al. 2018" RELATED synonym [] synonym: "Alphaproteobacteraeota" RELATED synonym [] synonym: "Alphaproteobacteriota" RELATED synonym [] synonym: "Proteobacteria" RELATED synonym [] synonym: "proteobacteria" RELATED blast_name [] synonym: "Proteobacteriota" RELATED synonym [] synonym: "purple bacteria" EXACT common_name [] synonym: "purple bacteria and relatives" EXACT common_name [] synonym: "purple non-sulfur bacteria" EXACT common_name [] synonym: "purple photosynthetic bacteria" EXACT common_name [] synonym: "purple photosynthetic bacteria and relatives" EXACT common_name [] xref: GC_ID:11 xref: PMID:11321122 xref: PMID:11837318 is_a: NCBITaxon:2 ! Bacteria property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:12242 name: Tobacco mosaic virus namespace: ncbi_taxonomy synonym: "TMV" BROAD acronym [] synonym: "tobacco mosaic virus TMV" EXACT equivalent_name [] synonym: "tobacco mosaic virus, TMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12234 ! Tobamovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12253 name: Tomato mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12234 ! Tobamovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12258 name: Comovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675075 ! Comovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12259 name: Andean potato mottle virus namespace: ncbi_taxonomy synonym: "Andean potato mottle virus APMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3047362 ! Comovirus andesense [Term] id: NCBITaxon:12260 name: Bean pod mottle virus namespace: ncbi_taxonomy alt_id: NCBITaxon:12265 synonym: "Bean-pod mottle virus" EXACT equivalent_name [] synonym: "BPMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3047677 ! Comovirus siliquae [Term] id: NCBITaxon:12261 name: Cowpea severe mosaic virus namespace: ncbi_taxonomy synonym: "cowpea severe mosaic virus CPSMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3047773 ! Comovirus severum [Term] id: NCBITaxon:12266 name: Dianthovirus namespace: ncbi_taxonomy synonym: "Dianthoviridae" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2560078 ! Regressovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12268 name: Carnation ringspot virus namespace: ncbi_taxonomy synonym: "carnation ringspot virus CRSV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3047729 ! Dianthovirus dianthi [Term] id: NCBITaxon:12269 name: Fabavirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675075 ! Comovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12270 name: Nepovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675075 ! Comovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12271 name: Arabis mosaic virus namespace: ncbi_taxonomy synonym: "AMV" BROAD acronym [] synonym: "nepovirus arabis mosaic virus ArMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3047374 ! Nepovirus arabis [Term] id: NCBITaxon:1227346 name: Fusarium proliferatum ET1 namespace: ncbi_taxonomy synonym: "Fusarium proliferatum var. proliferatum ET1" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:948311 ! Fusarium proliferatum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:12274 name: Grapevine fanleaf virus namespace: ncbi_taxonomy synonym: "GFLV" BROAD acronym [] synonym: "grapevine fanleaf nepovirus" EXACT equivalent_name [] synonym: "nepovirus grapevine fanleaf virus GFLV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3047852 ! Nepovirus foliumflabelli [Term] id: NCBITaxon:12275 name: Tomato black ring virus namespace: ncbi_taxonomy synonym: "nepovirus tomato blackring virus TBRV" EXACT equivalent_name [] synonym: "TBRV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3048372 ! Nepovirus nigranuli [Term] id: NCBITaxon:12280 name: Tomato ringspot virus namespace: ncbi_taxonomy synonym: "TOMRSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3048377 ! Nepovirus lycopersici [Term] id: NCBITaxon:12282 name: Tobacco ringspot virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3048370 ! Nepovirus nicotianae [Term] id: NCBITaxon:12291 name: Furovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675071 ! Virgaviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12293 name: Tobravirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675071 ! Virgaviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12294 name: Pea early-browning virus namespace: ncbi_taxonomy synonym: "Pea early browning virus" EXACT equivalent_name [] synonym: "pea early browning virus PEBV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12293 ! Tobravirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12295 name: Tobacco rattle virus namespace: ncbi_taxonomy synonym: "Tobacco Rattle Tobravirus" EXACT equivalent_name [] synonym: "tobacco rattle virus TRV" EXACT equivalent_name [] synonym: "tobacco rattle virus, TRV" EXACT equivalent_name [] synonym: "TRV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12293 ! Tobravirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1229510 name: Hydnodontaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452343 ! Trechisporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:12300 name: Bromovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39740 ! Bromoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1230097 name: Cytospora leucostoma namespace: ncbi_taxonomy alt_id: NCBITaxon:1081100 alt_id: NCBITaxon:5119 synonym: "Leucostoma leucostoma" RELATED synonym [] synonym: "Leucostoma persoonii" RELATED synonym [] synonym: "Sphaeria leucostoma" RELATED synonym [] synonym: "Valsa leucostoma" RELATED synonym [] synonym: "Valsa persoonii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:117544 ! Cytospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12301 name: Broad bean mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12300 ! Bromovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12302 name: Brome mosaic virus namespace: ncbi_taxonomy synonym: "BMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12300 ! Bromovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12303 name: Cowpea chlorotic mottle virus namespace: ncbi_taxonomy synonym: "CCMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12300 ! Bromovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12304 name: Cucumovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39740 ! Bromoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12305 name: Cucumber mosaic virus namespace: ncbi_taxonomy synonym: "CMV" BROAD acronym [] synonym: "cucumber mosaic cucumovirus" EXACT genbank_common_name [] synonym: "cucumber mosaic cucumovirus CMV" EXACT equivalent_name [] synonym: "cucumber mosaic virus CMV" EXACT equivalent_name [] synonym: "cucumber mosaic virus, CMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12304 ! Cucumovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1230527 name: Curvularia hawaiiensis namespace: ncbi_taxonomy alt_id: NCBITaxon:74412 alt_id: NCBITaxon:95734 synonym: "Bipolaris hawaiiensis" RELATED synonym [] synonym: "Cochliobolus hawaiiensis" RELATED synonym [] synonym: "Pseudocochliobolus hawaiiensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12313 name: Peanut stunt virus namespace: ncbi_taxonomy synonym: "peanut stunt cucumovirus" EXACT equivalent_name [] synonym: "peanut stunt virus PSV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12304 ! Cucumovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12315 name: Tomato aspermy virus namespace: ncbi_taxonomy alt_id: NCBITaxon:346224 synonym: "Chrysanthemum aspermy virus" EXACT equivalent_name [] synonym: "TAV" BROAD acronym [] synonym: "tomato aspermy virus TAV-B" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12304 ! Cucumovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12316 name: Ilarvirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39740 ! Bromoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12317 name: Tobacco streak virus namespace: ncbi_taxonomy synonym: "TSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12319 name: Apple mosaic virus namespace: ncbi_taxonomy synonym: "ApMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12320 name: Alfamovirus namespace: ncbi_taxonomy synonym: "Alfalfa mosaic virus group" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:39740 ! Bromoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12321 name: Alfalfa mosaic virus namespace: ncbi_taxonomy synonym: "AMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12320 ! Alfamovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1232139 name: Pseudomonas oleovorans/pseudoalcaligenes group namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:19936829 is_a: NCBITaxon:136841 ! Pseudomonas aeruginosa group property_value: has_rank NCBITaxon:species_subgroup [Term] id: NCBITaxon:12326 name: Hordeivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675071 ! Virgaviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12327 name: Barley stripe mosaic virus namespace: ncbi_taxonomy synonym: "barley stripe mosaic virus, BSMV" EXACT equivalent_name [] synonym: "BSMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12326 ! Hordeivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1232754 name: Tepovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1914298 ! Trivirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12329 name: Tenuivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1980418 ! Phenuiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12331 name: Rice stripe tenuivirus synonym: "Rice stripe virus" EXACT equivalent_name [] synonym: "rice stripe virus RSV" EXACT equivalent_name [] synonym: "RSV" BROAD acronym [] is_a: NCBITaxon:12329 ! Tenuivirus [Term] id: NCBITaxon:12332 name: Rice hoja blanca tenuivirus synonym: "RHBV" BROAD genbank_acronym [] synonym: "Rice hoja blanca virus" EXACT equivalent_name [] is_a: NCBITaxon:12329 ! Tenuivirus [Term] id: NCBITaxon:12333 name: unclassified bacterial viruses namespace: ncbi_taxonomy synonym: "bacterial virus" RELATED in_part [] synonym: "bacterial viruses" RELATED in_part [] synonym: "prokaryotic virus" RELATED in_part [] synonym: "unclassified bacteriophages" EXACT equivalent_name [] synonym: "unclassified phage" EXACT equivalent_name [] synonym: "unclassified phages" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:10239 ! Viruses [Term] id: NCBITaxon:123356 name: Hyaloperonospora parasitica namespace: ncbi_taxonomy synonym: "Peronospora parasitica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:453155 ! Hyaloperonospora parasitica species group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:123365 name: Neoteleostei namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1489388 ! Euteleosteomorpha property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:123366 name: Eurypterygia namespace: ncbi_taxonomy synonym: "Eurypterygii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:123365 ! Neoteleostei property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:123367 name: Ctenosquamata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:123366 ! Eurypterygia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:123368 name: Acanthomorphata namespace: ncbi_taxonomy synonym: "Acanthomorpha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:123367 ! Ctenosquamata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:123369 name: Euacanthomorphacea namespace: ncbi_taxonomy synonym: "Euacanthomorpha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:123368 ! Acanthomorphata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1236 name: Gammaproteobacteria namespace: ncbi_taxonomy synonym: "g-proteobacteria" RELATED blast_name [] synonym: "gamma proteobacteria" RELATED synonym [] synonym: "gamma subdivision" RELATED synonym [] synonym: "gamma subgroup" RELATED synonym [] synonym: "Proteobacteria gamma subdivision" RELATED synonym [] synonym: "Pseudomonadia" RELATED synonym [] synonym: "Purple bacteria, gamma subdivision" RELATED synonym [] xref: GC_ID:11 xref: PMID:23334881 is_a: NCBITaxon:1224 ! Proteobacteria property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:1236105 name: Phyllosticta sp. zjl-1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2624761 ! unclassified Phyllosticta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1239 name: Bacillota namespace: ncbi_taxonomy alt_id: NCBITaxon:31968 synonym: "\"Firmicutes\" corrig. Gibbons and Murray 1978 (Approved Lists 1980)" RELATED synonym [] synonym: "Bacillaeota" RELATED synonym [] synonym: "Bacillota corrig. Gibbons and Murray 2021" RELATED synonym [] synonym: "Bacillus/Clostridium group" RELATED synonym [] synonym: "clostridial firmicutes" RELATED synonym [] synonym: "Clostridium group firmicutes" RELATED synonym [] synonym: "Firmicuteota" RELATED synonym [] synonym: "Firmicutes" EXACT equivalent_name [] synonym: "firmicutes" RELATED blast_name [] synonym: "Low G+C firmicutes" RELATED synonym [] synonym: "low G+C Gram-positive bacteria" EXACT common_name [] synonym: "low GC Gram+" EXACT common_name [] xref: GC_ID:11 xref: PMID:10555317 xref: PMID:11034484 xref: PMID:11542017 xref: PMID:15143038 xref: PMID:25403554 xref: PMID:37409558 is_a: NCBITaxon:1783272 ! Terrabacteria group property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:124036 name: Berkeleyomyces basicola namespace: ncbi_taxonomy alt_id: NCBITaxon:112118 alt_id: NCBITaxon:113627 alt_id: NCBITaxon:60497 synonym: "Chalara elegans" RELATED synonym [] synonym: "Chalara elegans Nag Raj & W.B. Kendr., 1975" RELATED synonym [] synonym: "Thielavia basicola" RELATED synonym [] synonym: "Thielaviopsis basicola" RELATED synonym [] synonym: "Torula basicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2174073 ! Berkeleyomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:124133 name: Apiognomonia errabunda namespace: ncbi_taxonomy synonym: "Discula umbrinella" EXACT equivalent_name [] synonym: "Gloeosporium umbrinellum" RELATED synonym [] synonym: "Sphaeria errabunda" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:148322 ! Apiognomonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12430 name: Garlic virus D namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2843479 ! Acarallexivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12431 name: Garlic virus C namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2843479 ! Acarallexivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12432 name: Garlic virus B namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2843479 ! Acarallexivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12433 name: Garlic virus A namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2843479 ! Acarallexivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:124426 name: Ustilaginoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162454 ! Hypocreales incertae sedis is_a: NCBITaxon:34397 ! Clavicipitaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:12451 name: Raspberry bushy dwarf virus namespace: ncbi_taxonomy synonym: "raspberry bushy dwarf virus RBDV" EXACT equivalent_name [] synonym: "RBDV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:2955987 ! Idaeovirus rubi [Term] id: NCBITaxon:1245756 name: Uromyces appendiculatus SWBR1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5264 ! Uromyces appendiculatus property_value: has_rank NCBITaxon:isolate [Term] id: NCBITaxon:1245770 name: Phakopsora pachyrhizi Thai1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:170000 ! Phakopsora pachyrhizi property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:12465 name: Barley yellow mosaic virus namespace: ncbi_taxonomy synonym: "barley yellow mosaic virus, BaYMV" EXACT equivalent_name [] synonym: "BaYMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:39731 ! Bymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12466 name: Barley mild mosaic virus namespace: ncbi_taxonomy synonym: "barley mild mosaic virus BaMMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:39731 ! Bymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1247214 name: Cercospora aff. canescens CBS 153.55 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:125369 name: Paraphaeosphaeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:221678 ! Didymosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:125373 name: Paraphaeosphaeria michotii namespace: ncbi_taxonomy synonym: "Sphaeria michotii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:125369 ! Paraphaeosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1254980 name: Armillaria ostoyae RNA1 namespace: ncbi_taxonomy synonym: "Armillaria solidipes RNA1" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:47428 ! Armillaria ostoyae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1255046 name: Massarineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:92860 ! Pleosporales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:1255150 name: Cylindrocarpon sp. lbl4 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2649664 ! unclassified Cylindrocarpon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:125628 name: Ceratorhiza namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5250 ! Ceratobasidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1260783 name: Neofavolus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1261142 name: Alternaria solani f. sp. lycopersici namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:48100 ! Alternaria solani property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:12615 name: Cherry leaf roll virus namespace: ncbi_taxonomy synonym: "cherry leaf roll nepovirus" EXACT equivalent_name [] synonym: "cherry leaf roll nepovirus CLRV" EXACT equivalent_name [] synonym: "Cherry leafroll virus" EXACT equivalent_name [] synonym: "CLRV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3047741 ! Nepovirus avii [Term] id: NCBITaxon:1262396 name: Puccinia striiformis f. sp. tritici 87/7 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:168172 ! Puccinia striiformis f. sp. tritici property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1263198 name: Colletotrichum gossypii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1263492 name: Curvularia lunata CX-3 namespace: ncbi_taxonomy synonym: "Cochliobolus lunatus CX-3" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5503 ! Curvularia lunata property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1264588 name: Pyricularia grisea W97-11 namespace: ncbi_taxonomy synonym: "Magnaporthe grisea strain W97-11" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:148305 ! Pyricularia grisea property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1267397 name: Monosporascus eutypoides namespace: ncbi_taxonomy synonym: "Rechingeriella eutypoides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:155415 ! Monosporascus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1267547 name: Bacillus subtilis MB73/2 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:1423 ! Bacillus subtilis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:127114 name: Eballistra oryzae namespace: ncbi_taxonomy synonym: "Entyloma oryzae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:165797 ! Eballistra property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1271788 name: Curvularia aff. inaequalis HM-2012 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1271791 name: Pyricularia oryzae KJ201 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:318829 ! Pyricularia oryzae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1274786 name: Mucor circinelloides B8987 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36080 ! Mucor circinelloides property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1274793 name: Rhizopus stolonifer B9770 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4846 ! Rhizopus stolonifer property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1276524 name: Septoria cucurbitacearum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1279478 name: Rhizopus arrhizus 99-133 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:64495 ! Rhizopus arrhizus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:12809 name: Raspberry ringspot virus namespace: ncbi_taxonomy synonym: "raspberry ringspot virus RRV" EXACT equivalent_name [] synonym: "RRV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3048292 ! Nepovirus rubi [Term] id: NCBITaxon:1284435 name: Leptosphaeria sacchari namespace: ncbi_taxonomy synonym: "Phaeosphaeria sacchari" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5021 ! Leptosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1286787 name: Ovulariopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:128717 name: Hymenoxys namespace: ncbi_taxonomy alt_id: NCBITaxon:128715 synonym: "Dugaldia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:911346 ! Tetraneurinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:128718 name: Hymenoxys lemmonii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:128717 ! Hymenoxys property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1287681 name: Eutypa lata UCREL1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:97096 ! Eutypa lata property_value: has_rank NCBITaxon:isolate [Term] id: NCBITaxon:128790 name: Bean rugose mosaic virus namespace: ncbi_taxonomy synonym: "BRMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3047678 ! Comovirus rugomusivum [Term] id: NCBITaxon:12889 name: Coconut tinangaja viroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185754 ! Cocadviroid property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12894 name: Peach latent mosaic viroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185759 ! Pelamoviroid property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1289561 name: Phyllosticta coryli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:121621 ! Phyllosticta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12896 name: Avocado sunblotch viroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185758 ! Avsunviroid property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:12897 name: Chrysanthemum stunt viroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185753 ! Pospiviroid property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1290391 name: Botrytis cinerea BcDW1 namespace: ncbi_taxonomy synonym: "Botryotinia fuckeliana BcDW1" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:40559 ! Botrytis cinerea property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:12908 name: unclassified sequences namespace: ncbi_taxonomy alt_id: NCBITaxon:37559 alt_id: NCBITaxon:37963 alt_id: NCBITaxon:39419 synonym: "unclassified" RELATED synonym [] synonym: "unclassified sequences" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:2787823 ! unclassified entries [Term] id: NCBITaxon:1291517 name: Hemileia vastatrix HvCat namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:203904 ! Hemileia vastatrix property_value: has_rank NCBITaxon:isolate [Term] id: NCBITaxon:12916 name: Acidovorax namespace: ncbi_taxonomy synonym: "Acidivorax" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:1371056 xref: PMID:2275854 is_a: NCBITaxon:80864 ! Comamonadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1292357 name: Pseudomonas cannabina pv. alisalensis str. PSa1-3 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:757414 ! Pseudomonas cannabina pv. alisalensis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:129314 name: Colletotrichum falcatum namespace: ncbi_taxonomy alt_id: NCBITaxon:496421 synonym: "Glomerella tucumanensis" RELATED synonym [] synonym: "Physalospora tucumanensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2707348 ! Colletotrichum graminicola species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:129323 name: Chalaropsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1028423 ! Ceratocystidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:129334 name: Polystigma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5136 ! Phyllachoraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1293361 name: Cenchrinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147428 ! Paniceae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:129347 name: Phytophthora arecae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:129351 name: Phytophthora heveae namespace: ncbi_taxonomy synonym: "Phytophthora hevea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1293512 name: Coniocybomycetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:716546 ! leotiomyceta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:1293513 name: Coniocybales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1293512 ! Coniocybomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:129353 name: Phytophthora inflata namespace: ncbi_taxonomy alt_id: NCBITaxon:482633 alt_id: NCBITaxon:482636 alt_id: NCBITaxon:482637 alt_id: NCBITaxon:482639 alt_id: NCBITaxon:482640 alt_id: NCBITaxon:482641 alt_id: NCBITaxon:482642 alt_id: NCBITaxon:482643 alt_id: NCBITaxon:482644 alt_id: NCBITaxon:482645 alt_id: NCBITaxon:482646 alt_id: NCBITaxon:482647 alt_id: NCBITaxon:482648 alt_id: NCBITaxon:482649 alt_id: NCBITaxon:482650 alt_id: NCBITaxon:482651 alt_id: NCBITaxon:482652 alt_id: NCBITaxon:482654 alt_id: NCBITaxon:482655 alt_id: NCBITaxon:482812 alt_id: NCBITaxon:482813 alt_id: NCBITaxon:482814 alt_id: NCBITaxon:482815 alt_id: NCBITaxon:482816 alt_id: NCBITaxon:482817 alt_id: NCBITaxon:482818 alt_id: NCBITaxon:482819 xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:129354 name: Phytophthora katsurae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:129358 name: Phytophthora phaseoli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:129384 name: Ascomycota incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:108599 xref: GC_ID:1 is_a: NCBITaxon:4890 ! Ascomycota [Term] id: NCBITaxon:129394 name: Xanthomonas oryzae pv. oryzicola namespace: ncbi_taxonomy synonym: "Xanthomonas campestris pv. oryzicola" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:347 ! Xanthomonas oryzae [Term] id: NCBITaxon:1298630 name: Becurtovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10811 ! Geminiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13000 name: Chalara namespace: ncbi_taxonomy alt_id: NCBITaxon:5496 xref: GC_ID:1 is_a: NCBITaxon:159639 ! Helotiales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1300078 name: Flammulina velutipes L11 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:38945 ! Flammulina velutipes property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:13001 name: Thielaviopsis paradoxa namespace: ncbi_taxonomy alt_id: NCBITaxon:54188 synonym: "Ceratocystis paradoxa" RELATED synonym [] synonym: "Ceratostomella paradoxa" RELATED synonym [] synonym: "Chalara paradoxa" RELATED synonym [] synonym: "Endoconidiophora paradoxa" RELATED synonym [] synonym: "Ophiostoma paradoxum" RELATED synonym [] synonym: "Sporoschisma paradoxum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:60496 ! Thielaviopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1302712 name: Pyrenophora seminiperda CCB06 namespace: ncbi_taxonomy synonym: "Pyrenophora semeniperda CCB06" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:91370 ! Pyrenophora seminiperda property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1303387 name: Mycosphaerella pomi namespace: ncbi_taxonomy synonym: "Sphaerella pomi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:41254 ! Mycosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1303578 name: Diaporthe ganjae namespace: ncbi_taxonomy synonym: "Phomopsis ganjae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13069 name: Fuchsia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1585429 ! Circaeeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1307775 name: Anserineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1307796 ! Chenopodioideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1307796 name: Chenopodioideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1804623 ! Chenopodiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:131221 name: Streptophytina namespace: ncbi_taxonomy synonym: "Charophyta/Embryophyta group" RELATED synonym [] synonym: "charophyte/embryophyte group" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:35493 ! Streptophyta property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:131226 name: Cherry mottle leaf virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40276 ! Trichovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:131312 name: Mycovellosiella namespace: ncbi_taxonomy alt_id: NCBITaxon:29913 synonym: "Mycovelosiella" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:131316 name: Passalora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:131321 name: Phaeoramularia namespace: ncbi_taxonomy synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:129384 ! Ascomycota incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:131324 name: Pseudocercospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:131345 name: Stigmina namespace: ncbi_taxonomy synonym: "mitosporic Dothideales" RELATED in_part [] synonym: "Stigmina" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:148100 ! Dothideales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1314666 name: Schizophyllum commune Loenen D namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5334 ! Schizophyllum commune property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1314671 name: Exobasidium vaccinii MPITM namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5407 ! Exobasidium vaccinii property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1314779 name: Zopfia rhizophila CBS 207.26 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:160035 ! Zopfia rhizophila property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1314785 name: Laetiporus sulphureus 93-53 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5630 ! Laetiporus sulphureus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:131567 name: cellular organisms namespace: ncbi_taxonomy synonym: "biota" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1 ! root [Term] id: NCBITaxon:1316738 name: Armillaria mellea 131 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:47429 ! Armillaria mellea property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1317066 name: Phytophthora parasitica P1976 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4792 ! Phytophthora parasitica property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1318462 name: Fusarium culmorum CS7071 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5516 ! Fusarium culmorum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1319578 name: Acrocalymma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:715496 ! Morosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:132095 name: Cercospora canescens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:132184 name: Cercospora apii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1322061 name: Rhizoctonia namespace: ncbi_taxonomy alt_id: NCBITaxon:5573 xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:5250 ! Ceratobasidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1325251 name: Myrothecium sp. cp0024d namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2619772 ! unclassified Myrothecium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1325723 name: Fusarium neocosmosporiellum namespace: ncbi_taxonomy alt_id: NCBITaxon:1237070 alt_id: NCBITaxon:131367 alt_id: NCBITaxon:231477 alt_id: NCBITaxon:40622 alt_id: NCBITaxon:453762 alt_id: NCBITaxon:487226 alt_id: NCBITaxon:875440 synonym: "Fusarium neocosmosporiellum O'Donnell & Geiser, 2013" RELATED synonym [] synonym: "Neocosmospora africana" RELATED synonym [] synonym: "Neocosmospora vasinfecta" RELATED synonym [] synonym: "Neocosmospora vasinfecta var. africana" RELATED synonym [] synonym: "Neocosmospora vasinfecta var. vasinfecta" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:232080 ! Fusarium solani species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1328759 name: Lentinus tigrinus ALCF2SS1-6 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5365 ! Lentinus tigrinus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1328864 name: Rathayibacter tritici NCPPB 1857 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:33888 ! Rathayibacter tritici property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1328868 name: Rathayibacter iranicus NCPPB 2253 = VKM Ac-1602 namespace: ncbi_taxonomy synonym: "Rathayibacter iranicus NCPPB 2253" RELATED synonym [] synonym: "Rathayibacter iranicus VKM Ac-1602" RELATED synonym [] synonym: "Rathayibacter iranicus VKM Ac-1602 = NCPPB 2253" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:30533634 is_a: NCBITaxon:59737 ! Rathayibacter iranicus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:13289 name: Tilletia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5279 ! Tilletiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1328926 name: Fusarium lateritium species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23379853 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:13290 name: Tilletia caries namespace: ncbi_taxonomy alt_id: NCBITaxon:61258 synonym: "stinking smut of wheat" EXACT common_name [] synonym: "Tilletia tritici" RELATED synonym [] synonym: "Uredo caries" RELATED synonym [] synonym: "wheat bunt fungus" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:13289 ! Tilletia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13291 name: Tilletia controversa namespace: ncbi_taxonomy synonym: "dwarf bunt fungus" EXACT genbank_common_name [] synonym: "Tilletia controversa J.G. Kuhn, 1874" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:13289 ! Tilletia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1329799 name: Archelosauria namespace: ncbi_taxonomy synonym: "Archosauria-Testudines" RELATED synonym [] synonym: "Testudines + Archosauria group" RELATED synonym [] xref: GC_ID:1 xref: PMID:22839753 xref: PMID:25450099 is_a: NCBITaxon:32561 ! Sauria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1329916 name: Fusarium decemcellulare species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23379853 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:1329961 name: Bifurcata namespace: ncbi_taxonomy synonym: "split-tongued squamates" EXACT genbank_common_name [] xref: GC_ID:1 xref: PMID:22982760 is_a: NCBITaxon:8509 ! Squamata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1330545 name: Lelliottia namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:23632228 is_a: NCBITaxon:543 ! Enterobacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:133173 name: Heterodera hordecalis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1333669 name: Candida albicans CEC2023 namespace: ncbi_taxonomy xref: GC_ID:12 is_a: NCBITaxon:5476 ! Candida albicans property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1334443 name: Euphorbia subgen. Chamaesyce namespace: ncbi_taxonomy synonym: "Chamaesyce" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3990 ! Euphorbia property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:1335574 name: Euphorbia sect. Plagianthae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1334443 ! Euphorbia subgen. Chamaesyce property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:1335584 name: Euphorbia sect. Poinsettia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1334443 ! Euphorbia subgen. Chamaesyce property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:1335588 name: Euphorbia subsect. Stormieae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1335584 ! Euphorbia sect. Poinsettia property_value: has_rank NCBITaxon:subsection [Term] id: NCBITaxon:1337113 name: Cercospora citrullina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1338369 name: Dipnotetrapodomorpha namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:8287 ! Sarcopterygii property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:13402 name: Carya namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:16714 ! Juglandaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1341353 name: Passiflora aff. ekmanii KEPU-2013 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3684 ! Passiflora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13422 name: Chrysanthemum namespace: ncbi_taxonomy alt_id: NCBITaxon:41567 synonym: "Dendranthema" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:886714 ! Artemisiinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1342367 name: Alternaria saponariae namespace: ncbi_taxonomy synonym: "Macrosporium saponariae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499257 ! Alternaria sect. Gypsophilae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1342378 name: Comoclathris namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13432 name: Clerodendrum namespace: ncbi_taxonomy synonym: "Clerodendron" RELATED synonym [] xref: GC_ID:1 xref: PMID:33419433 is_a: NCBITaxon:2835920 ! Clerodendreae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:134362 name: Capnodiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451867 ! Dothideomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:13442 name: Coffea namespace: ncbi_taxonomy alt_id: NCBITaxon:49384 synonym: "coffee" EXACT common_name [] synonym: "Psilanthus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:169640 ! Coffeeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13443 name: Coffea arabica namespace: ncbi_taxonomy synonym: "arabica coffee" EXACT common_name [] synonym: "coffee" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:13442 ! Coffea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1344955 name: Rhizopodaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1344963 ! Mucorineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1344961 name: Gilbertelloideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:101094 ! Choanephoraceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1344962 name: Choanephoroideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:101094 ! Choanephoraceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1344963 name: Mucorineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4827 ! Mucorales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:13450 name: Corylus namespace: ncbi_taxonomy synonym: "hazelnuts" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3514 ! Betulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13451 name: Corylus avellana namespace: ncbi_taxonomy synonym: "European hazelnut" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:13450 ! Corylus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:134698 name: Peronospora farinosa namespace: ncbi_taxonomy synonym: "downy mildew" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13474 name: Cylindrocarpon namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1347411 name: Cercospora gerberae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1347418 name: Cercospora brassicicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1348162 name: Peronospora farinosa f. sp. spinaciae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:134698 ! Peronospora farinosa property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:1351751 name: Parastagonospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5020 ! Phaeosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1351752 name: Parastagonospora avenae namespace: ncbi_taxonomy alt_id: NCBITaxon:55066 alt_id: NCBITaxon:55068 synonym: "Leptosphaeria avenaria" RELATED synonym [] synonym: "Phaeosphaeria avenaria (G.F. Weber) O.E. Erikss., 1967" RELATED synonym [] synonym: "Septoria avenae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1351751 ! Parastagonospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13524 name: Exacum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:303181 ! Exaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13525 name: Exacum affine namespace: ncbi_taxonomy alt_id: NCBITaxon:198375 synonym: "Exacum gracilipes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:13524 ! Exacum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:135283 name: Podosphaera xanthii namespace: ncbi_taxonomy alt_id: NCBITaxon:119612 alt_id: NCBITaxon:119613 alt_id: NCBITaxon:119618 alt_id: NCBITaxon:119619 alt_id: NCBITaxon:119620 alt_id: NCBITaxon:119621 alt_id: NCBITaxon:119622 alt_id: NCBITaxon:119623 alt_id: NCBITaxon:1961908 alt_id: NCBITaxon:372984 alt_id: NCBITaxon:565447 alt_id: NCBITaxon:565450 alt_id: NCBITaxon:92467 synonym: "Erysiphe xanthii" RELATED synonym [] synonym: "Podosphaera xanthii (Castagne) U. Braun & Shishkoff, 2000" RELATED synonym [] synonym: "Sphaerotheca xanthii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62701 ! Podosphaera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1353009 name: Trametes coccinea BRFM310 namespace: ncbi_taxonomy synonym: "Pycnoporus coccineus BRFM310" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:158605 ! Trametes coccinea property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:13546 name: Gerbera namespace: ncbi_taxonomy alt_id: NCBITaxon:41621 synonym: "Piloselloides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:102816 ! Mutisieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13547 name: Gerbera jamesonii namespace: ncbi_taxonomy alt_id: NCBITaxon:87002 synonym: "Transvaal daisy" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:13546 ! Gerbera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1355161 name: Zygosaccharomyces bailii ISA1307 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4954 ! Zygosaccharomyces bailii property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:135614 name: Xanthomonadales namespace: ncbi_taxonomy synonym: "Lysobacterales" RELATED synonym [] xref: GC_ID:11 xref: PMID:19786109 xref: PMID:24408949 xref: PMID:25481407 is_a: NCBITaxon:1236 ! Gammaproteobacteria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:13562 name: Heterobasidion namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:40420 ! Bondarzewiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:135621 name: Pseudomonadaceae namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:72274 ! Pseudomonadales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:13563 name: Heterobasidion annosum namespace: ncbi_taxonomy alt_id: NCBITaxon:1292239 synonym: "Polyporus annosus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:256003 ! Heterobasidion annosum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1357291 name: Pseudomonas viridiflava TA043 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:33069 ! Pseudomonas viridiflava property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1357677 name: Mucor racemosus B9645 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4841 ! Mucor racemosus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1357678 name: Rhizopus microsporus B9738 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:58291 ! Rhizopus microsporus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:135778 name: Ramulispora sorghi namespace: ncbi_taxonomy synonym: "Septorella sorghi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:237547 ! Ramulispora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:135779 name: Cercospora zeae-maydis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:136422 name: Uromyces striatus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5263 ! Uromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13656 name: Rhizorhapis suberifaciens namespace: ncbi_taxonomy alt_id: NCBITaxon:1387169 alt_id: NCBITaxon:1387170 alt_id: NCBITaxon:1387171 alt_id: NCBITaxon:1387172 alt_id: NCBITaxon:1387173 alt_id: NCBITaxon:1387175 alt_id: NCBITaxon:1387176 synonym: "corky root of lettuce" EXACT genbank_common_name [] synonym: "Rhizomonas suberifaciens" RELATED synonym [] synonym: "Sphingobium suberifaciens" RELATED synonym [] synonym: "Sphingomonas suberifaciens" RELATED synonym [] xref: GC_ID:11 xref: PMID:10385200 xref: PMID:22561591 xref: PMID:24436067 xref: PMID:8427800 is_a: NCBITaxon:1649487 ! Rhizorhapis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1367451 name: Pseudomonas fuscovaginae ICMP 5940 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:50340 ! Pseudomonas fuscovaginae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1367540 name: Nothophaeocryptopus gaeumannii CBS 267.37 namespace: ncbi_taxonomy synonym: "Phaeocryptopus gaeumannii CBS 267.37" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2060159 ! Nothophaeocryptopus gaeumannii property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:13684 name: Parastagonospora nodorum namespace: ncbi_taxonomy alt_id: NCBITaxon:54791 synonym: "Depazea nodorum" RELATED synonym [] synonym: "Leptosphaeria nodorum" RELATED synonym [] synonym: "Phaeosphaeria nodorum" RELATED synonym [] synonym: "Septoria nodorum" RELATED synonym [] synonym: "Stagonospora nodorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1351751 ! Parastagonospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:136841 name: Pseudomonas aeruginosa group namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:286 ! Pseudomonas property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:136843 name: Pseudomonas fluorescens group namespace: ncbi_taxonomy synonym: "fluorescent pseudomonads" EXACT genbank_common_name [] synonym: "Pseudomonas fluorescens complex" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:28360897 is_a: NCBITaxon:286 ! Pseudomonas property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:136849 name: Pseudomonas syringae group namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:29270162 is_a: NCBITaxon:286 ! Pseudomonas property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:13687 name: Sphingomonas namespace: ncbi_taxonomy alt_id: NCBITaxon:13655 alt_id: NCBITaxon:298705 alt_id: NCBITaxon:56360 alt_id: NCBITaxon:59802 xref: GC_ID:11 xref: PMID:10385200 xref: PMID:10843052 xref: PMID:11491340 xref: PMID:12361250 xref: PMID:13130003 xref: PMID:2111872 xref: PMID:22228660 xref: PMID:28691655 xref: PMID:8186095 xref: PMID:9103650 xref: PMID:9336925 is_a: NCBITaxon:41297 ! Sphingomonadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13749 name: Vaccinium namespace: ncbi_taxonomy alt_id: NCBITaxon:57534 xref: GC_ID:1 is_a: NCBITaxon:217062 ! Vaccinieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:137494 name: Cylindrocladiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:137496 name: Cylindrocladiella parva namespace: ncbi_taxonomy synonym: "Cylindrocladium parvum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:137494 ! Cylindrocladiella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13750 name: Vaccinium macrocarpon namespace: ncbi_taxonomy synonym: "American cranberry" EXACT common_name [] synonym: "large cranberry" EXACT common_name [] synonym: "Oxycoccus macrocarpos" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:13749 ! Vaccinium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:137627 name: Myxogastromycetidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33680 ! Myxogastria property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:137663 name: Pratylenchus zeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:137755 name: Perenniporia medulla-panis namespace: ncbi_taxonomy alt_id: NCBITaxon:1955099 synonym: "Boletus medulla-panis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:81049 ! Perenniporia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:137757 name: Ipomovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39729 ! Potyviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:137758 name: Cassava brown streak virus namespace: ncbi_taxonomy alt_id: NCBITaxon:980520 xref: GC_ID:1 is_a: NCBITaxon:137757 ! Ipomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1378092 name: Pantoea ananatis BD442 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:553 ! Pantoea ananatis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1379290 name: Peniophora sp. monte123 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2635284 ! unclassified Peniophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1379297 name: Thanatephorus cucumeris JGI SC002DCMIDF namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:107832 ! Thanatephorus cucumeris property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:138011 name: Brassica napus var. napus namespace: ncbi_taxonomy synonym: "annual rape" EXACT common_name [] synonym: "Brassica napus subsp. napus" RELATED synonym [] synonym: "Brassica napus subsp. oleifera" RELATED synonym [] synonym: "Brassica napus var. oleifera" RELATED synonym [] synonym: "canola" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3708 ! Brassica napus property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:138063 name: Seiridium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1812776 ! Sporocadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1381753 name: Moniliophthora roreri MCA 2997 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:221103 ! Moniliophthora roreri property_value: has_rank NCBITaxon:isolate [Term] id: NCBITaxon:1383253 name: Synchytrium aureum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:286114 ! Synchytrium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1383573 name: Fomitella supina namespace: ncbi_taxonomy synonym: "Boletus supinus" RELATED synonym [] synonym: "Fomes supinus" RELATED synonym [] synonym: "Fomitopsis supina" RELATED synonym [] synonym: "Polyporus supinus" RELATED synonym [] synonym: "Scindalma supinum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:227964 ! Fomitella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1385 name: Bacillales namespace: ncbi_taxonomy alt_id: NCBITaxon:2954866 synonym: "Bacillus/Staphylococcus group" RELATED synonym [] synonym: "Caryophanales" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:91061 ! Bacilli property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1386 name: Bacillus namespace: ncbi_taxonomy synonym: "Bacillus" EXACT scientific_name [] synonym: "Bacillus rRNA group 1" EXACT common_name [] xref: GC_ID:11 xref: PMID:10843090 xref: PMID:11491334 xref: PMID:1742196 xref: PMID:2223602 xref: PMID:23475340 xref: PMID:7727277 xref: PMID:8138135 xref: PMID:8863420 is_a: NCBITaxon:186817 ! Bacillaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1387572 name: Septoria pistaciae namespace: ncbi_taxonomy synonym: "Cylindrosporium pistaciae" RELATED synonym [] synonym: "Phloeospora pistaciae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1387573 name: Septoria pistaciarum namespace: ncbi_taxonomy synonym: "Mycosphaerella pistaciarum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:13893 name: Cocos namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:169725 ! Attaleinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:13894 name: Cocos nucifera namespace: ncbi_taxonomy synonym: "coconut palm" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:13893 ! Cocos property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:138982 name: Potato latent virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:139065 name: Agaricomycotina incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:34477 xref: GC_ID:1 is_a: NCBITaxon:5302 ! Agaricomycotina [Term] id: NCBITaxon:139148 name: Hyphodontia aspera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:68802 ! Hyphodontia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:139264 name: Cyphellaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:2980790 xref: GC_ID:1 is_a: NCBITaxon:2982316 ! Marasmiineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1392817 name: Citrus sp. kk53 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:229629 ! unclassified Citrus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:139378 name: Oxyporus populinus namespace: ncbi_taxonomy alt_id: NCBITaxon:2008362 synonym: "Boletus populinus" RELATED synonym [] synonym: "Rigidoporus populinus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1765026 ! Oxyporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:139379 name: Hymenochaete namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40424 ! Hymenochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:139380 name: Hymenochaetales namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:30368779 is_a: NCBITaxon:355688 ! Agaricomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:139433 name: Physisporinus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:378266 ! Meripilaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1394527 name: Colletotrichum graminicola iJAB2 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:31870 ! Colletotrichum graminicola property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1395570 name: Burkholderia cepacia JBK9 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:292 ! Burkholderia cepacia property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:139639 name: Botrytis aclada namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33196 ! Botrytis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:139640 name: Botrytis squamosa namespace: ncbi_taxonomy synonym: "Botryotinia squamosa" RELATED synonym [] synonym: "Botrytis squamosa J.C.Walker" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33196 ! Botrytis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:139641 name: Botrytis byssoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33196 ! Botrytis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:139968 name: Dictyochaeta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:103886 ! Chaetosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:139969 name: Dictyochaeta fertilis namespace: ncbi_taxonomy alt_id: NCBITaxon:2898063 synonym: "Codinaea fertilis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:139968 ! Dictyochaeta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1400148 name: Enterobacter cloacae UCI 29 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:550 ! Enterobacter cloacae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1400345 name: Helminthosporium solani B-AC-16A namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:58128 ! Helminthosporium solani property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:140044 name: Pythium aristosporum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:140048 name: Pythium tracheiphilum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:140106 name: Neonectria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:140192 name: Eutypella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:42364 ! Diatrypaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:140311 name: Prunus cerasus namespace: ncbi_taxonomy alt_id: NCBITaxon:2614735 alt_id: NCBITaxon:3045380 synonym: "Cerasus vulgaris" RELATED synonym [] synonym: "pie cherry" EXACT common_name [] synonym: "Prunus vulgaris" RELATED synonym [] synonym: "sour cherry" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3754 ! Prunus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1404 name: Priestia megaterium namespace: ncbi_taxonomy alt_id: NCBITaxon:1191421 alt_id: NCBITaxon:1219390 alt_id: NCBITaxon:1225091 alt_id: NCBITaxon:1286049 alt_id: NCBITaxon:1683506 alt_id: NCBITaxon:1683507 alt_id: NCBITaxon:1683531 alt_id: NCBITaxon:3028149 alt_id: NCBITaxon:405417 xref: GC_ID:11 is_a: NCBITaxon:2800373 ! Priestia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1404346 name: Trametes sp. zzu1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2642982 ! unclassified Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1405614 name: Pleurotus sp. ql-11 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2628084 ! unclassified Pleurotus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1405617 name: Coprinus sp. ql-8 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2620484 ! unclassified Coprinus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:140568 name: Allexivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675064 ! Alphaflexiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1407458 name: Penicillium expansum T01 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:27334 ! Penicillium expansum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:140759 name: Phaeoramularia manihotis namespace: ncbi_taxonomy synonym: "Cercospora caribaea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131321 ! Phaeoramularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1415818 name: Pichia aff. alni PLE2W3 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4919 ! Pichia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1419114 name: Puccinia horiana BY2013C01 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:331382 ! Puccinia horiana property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1423 name: Bacillus subtilis namespace: ncbi_taxonomy alt_id: NCBITaxon:1042380 alt_id: NCBITaxon:1042381 alt_id: NCBITaxon:1042382 alt_id: NCBITaxon:1224247 alt_id: NCBITaxon:1232470 alt_id: NCBITaxon:1232819 alt_id: NCBITaxon:1232822 alt_id: NCBITaxon:1232824 alt_id: NCBITaxon:1232825 alt_id: NCBITaxon:1232828 alt_id: NCBITaxon:1232830 alt_id: NCBITaxon:1232840 alt_id: NCBITaxon:1232841 alt_id: NCBITaxon:1232844 alt_id: NCBITaxon:1429427 alt_id: NCBITaxon:1429428 alt_id: NCBITaxon:1451270 alt_id: NCBITaxon:1451272 alt_id: NCBITaxon:1494536 alt_id: NCBITaxon:1494586 alt_id: NCBITaxon:1617262 alt_id: NCBITaxon:1652099 alt_id: NCBITaxon:1695905 alt_id: NCBITaxon:1707495 alt_id: NCBITaxon:1760969 alt_id: NCBITaxon:1828507 alt_id: NCBITaxon:387338 alt_id: NCBITaxon:523730 alt_id: NCBITaxon:941949 alt_id: NCBITaxon:981081 synonym: "Bacillus mesentericus" RELATED in_part [] synonym: "Bacillus natto" RELATED synonym [] synonym: "Bacillus subtilis/Bacillus globigii" RELATED in_part [] synonym: "Bacillus uniflagellatus" RELATED synonym [] synonym: "Vibrio subtilis" RELATED synonym [] xref: GC_ID:11 xref: PMID:11211269 is_a: NCBITaxon:653685 ! Bacillus subtilis group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1423893 name: Robbsia andropogonis Ba3549 namespace: ncbi_taxonomy synonym: "Burkholderia andropogonis Ba3549" RELATED synonym [] synonym: "Paraburkholderia andropogonis Ba3549" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:28092 ! Robbsia andropogonis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1424293 name: Curvularia caricae-papayae namespace: ncbi_taxonomy alt_id: NCBITaxon:1917185 synonym: "Curvularia carica-papayae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1424649 name: Phyllostictaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451869 ! Botryosphaeriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1425352 name: Macrodiplodiopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147498 ! Pleosporales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1425637 name: Coniella castaneicola namespace: ncbi_taxonomy alt_id: NCBITaxon:187252 synonym: "Gloeosporium castaneicola" RELATED synonym [] synonym: "Gloeosporium castanicola" RELATED synonym [] synonym: "Pilidiella castaneicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:172190 ! Coniella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1427367 name: Dickeya dadantii DCE-01 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:204038 ! Dickeya dadantii property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:142796 name: Eumycetozoa namespace: ncbi_taxonomy synonym: "Eumycetozoa Zopf, 1884" RELATED synonym [] synonym: "Mycetozoa" RELATED synonym [] synonym: "mycetozoans" RELATED synonym [] xref: GC_ID:1 xref: PMID:11062127 xref: PMID:9342353 is_a: NCBITaxon:2605435 ! Evosea property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:1430313 name: Ascochyta sorghi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1431293 name: Aspergillus flavus FRR 4351 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5059 ! Aspergillus flavus property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1432307 name: Sclerotinia borealis F-4128 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:77105 ! Sclerotinia borealis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:143450 name: Mycosphaerella arachidis namespace: ncbi_taxonomy alt_id: NCBITaxon:143449 synonym: "Cercospora arachidicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:41254 ! Mycosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:143451 name: Plasmopara viticola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4780 ! Plasmopara property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:143452 name: Pseudoperonospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:143453 name: Pseudoperonospora cubensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:143452 ! Pseudoperonospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1434909 name: Trichoderma harzianum T23 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5544 ! Trichoderma harzianum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1435351 name: Erwinia sp. ho35 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2622719 ! unclassified Erwinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1437010 name: Boreoeutheria namespace: ncbi_taxonomy synonym: "Boreotheria" RELATED synonym [] xref: GC_ID:1 xref: PMID:11743200 xref: PMID:11791233 is_a: NCBITaxon:9347 ! Eutheria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1437180 name: Acrogymnospermae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:58024 ! Spermatophyta property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1437183 name: Mesangiospermae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:25249442 is_a: NCBITaxon:3398 ! Magnoliopsida property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1437197 name: Petrosaviidae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:26350789 is_a: NCBITaxon:4447 ! Liliopsida property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:1437201 name: Pentapetalae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:91827 ! Gunneridae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:143901 name: Benyvirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1513233 ! Benyviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:143937 name: Neofabraea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:76657 ! Dermateaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:143941 name: Neofabraea perennans namespace: ncbi_taxonomy synonym: "Cryptosporiopsis perennans" RELATED synonym [] synonym: "perennial canker of apple" EXACT common_name [] synonym: "Pezicula perennans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:143937 ! Neofabraea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1441629 name: Pseudomonas cichorii JBC1 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:36746 ! Pseudomonas cichorii property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1443895 name: Rhodococcus fascians A3b namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:1828 ! Rhodococcus fascians property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1444343 name: Stigmina palmivora namespace: ncbi_taxonomy synonym: "Cercospora palmivora" RELATED synonym [] synonym: "Exosporium palmivorum" RELATED synonym [] synonym: "Sciniatosporium palmivorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131345 ! Stigmina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1445691 name: Pseudoepicoccum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1445692 name: Pseudoepicoccum cocos namespace: ncbi_taxonomy synonym: "Epicoccum cocos" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1445691 ! Pseudoepicoccum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1446380 name: Pinales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2821352 ! Conifers I property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1447541 name: Pseudomonas aeruginosa BWH033 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:287 ! Pseudomonas aeruginosa property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1448052 name: Globisporangium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4782 ! Pythiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1448308 name: Corynespora cassiicola Philippines namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:59586 ! Corynespora cassiicola property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1450154 name: Fusarium graminearum CS3005 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5518 ! Fusarium graminearum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1451139 name: Aspergillus niger NRRL3 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5061 ! Aspergillus niger property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1452722 name: Priestia megaterium Q3 namespace: ncbi_taxonomy synonym: "Bacillus megaterium Q3" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:1404 ! Priestia megaterium property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1453499 name: Xylella fastidiosa J1a12 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2371 ! Xylella fastidiosa property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1453503 name: Pseudomonas oleovorans AD6 namespace: ncbi_taxonomy synonym: "Pseudomonas pseudoalcaligenes AD6" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:301 ! Pseudomonas oleovorans property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:145392 name: Curvularia spicifera namespace: ncbi_taxonomy alt_id: NCBITaxon:1961118 alt_id: NCBITaxon:2048501 alt_id: NCBITaxon:2306438 alt_id: NCBITaxon:74422 synonym: "Bipolaris spicifera" RELATED synonym [] synonym: "Brachycladium spiciferum" RELATED synonym [] synonym: "Cochliobolus spicifer" RELATED synonym [] synonym: "Dendryphion spiciferum" RELATED synonym [] synonym: "Drechslera spicifera" RELATED synonym [] synonym: "Helminthosporium spiciferum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1454226 name: Agrobacterium tumefaciens S2 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:358 ! Agrobacterium tumefaciens property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:145428 name: Orthalicoidea namespace: ncbi_taxonomy alt_id: NCBITaxon:213562 synonym: "Bulimuloidea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:216366 ! Helicina property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:145471 name: Brassica rapa subsp. oleifera namespace: ncbi_taxonomy alt_id: NCBITaxon:267283 synonym: "biennial turnip rape" EXACT common_name [] synonym: "Brassica campestris" RELATED synonym [] synonym: "Brassica campestris var. oleifera" RELATED synonym [] synonym: "Brassica rapa (Campestris Group)" EXACT equivalent_name [] synonym: "Brassica rapa (Oleifera Group)" EXACT equivalent_name [] synonym: "Brassica rapa subsp. campestris" RELATED synonym [] synonym: "Brassica rapa subsp. silvestris" EXACT equivalent_name [] synonym: "Brassica rapa subsp. sylvestris" RELATED synonym [] synonym: "Brassica rapa var. silvestris" EXACT equivalent_name [] synonym: "Brassica rapa var. sylvestris" RELATED synonym [] synonym: "Brassica rapa Winter Turnip Rape Group" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3711 ! Brassica rapa property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:1457195 name: Ralstonia solanacearum Rs-10-244 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:305 ! Ralstonia solanacearum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:1457286 name: Dorylaimia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119088 ! Enoplea property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:145793 name: Phakopsoraceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1458476 name: Xanthomonas oryzae pv. oryzae PXO86 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:64187 ! Xanthomonas oryzae pv. oryzae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:145973 name: Colletotrichum circinans namespace: ncbi_taxonomy synonym: "Vermicularia circinans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1460697 name: Coniothyriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:715340 ! Pleosporineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1462606 name: Glycine subgen. Soja namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3846 ! Glycine property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:1463138 name: Ranunculoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3440 ! Ranunculaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1463147 name: Anemoneae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1463138 ! Ranunculoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1464778 name: Cassava Ivorian bacilliform virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1195162 ! unclassified Anulavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1470042 name: Acremonium sp. snG05H1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2689091 ! unclassified Acremonium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1472008 name: Mycena aff. murina D1.1c namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41247 ! Mycena property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1473206 name: Bjerkandera sp. bje54 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2644322 ! unclassified Bjerkandera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1473215 name: Colletotrichum sp. cse34 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2604346 ! unclassified Colletotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:147367 name: Oryzoideae namespace: ncbi_taxonomy alt_id: NCBITaxon:1647564 synonym: "Ehrhartoideae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:359160 ! BOP clade property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:147368 name: Pooideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:359160 ! BOP clade property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:147369 name: Panicoideae namespace: ncbi_taxonomy alt_id: NCBITaxon:219388 synonym: "Centothecoideae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:147370 ! PACMAD clade property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:147370 name: PACMAD clade namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4479 ! Poaceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:147380 name: Oryzeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147367 ! Oryzoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:147387 name: Poeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1648037 ! Poodae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:147388 name: Bromeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1648038 ! Triticodae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:147389 name: Triticeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1648038 ! Triticodae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:147428 name: Paniceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1648036 ! Panicodae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:147429 name: Andropogoneae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1648033 ! Andropogonodae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:147498 name: Pleosporales incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:92860 ! Pleosporales [Term] id: NCBITaxon:147537 name: Saccharomycotina namespace: ncbi_taxonomy synonym: "true yeasts" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:716545 ! saccharomyceta property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:147538 name: Pezizomycotina namespace: ncbi_taxonomy synonym: "Euascomycota" RELATED synonym [] synonym: "filamentous ascomycetes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:716545 ! saccharomyceta property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:147541 name: Dothideomycetes namespace: ncbi_taxonomy synonym: "bitunicate ascomycetes" RELATED in_part [] synonym: "Loculoascomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:715962 ! dothideomyceta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:147545 name: Eurotiomycetes namespace: ncbi_taxonomy alt_id: NCBITaxon:147540 synonym: "bitunicate ascomycetes" RELATED in_part [] synonym: "Loculoascomycetes" RELATED in_part [] synonym: "Plectomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:716546 ! leotiomyceta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:147547 name: Lecanoromycetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:716546 ! leotiomyceta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:147548 name: Leotiomycetes namespace: ncbi_taxonomy alt_id: NCBITaxon:194550 xref: GC_ID:1 xref: PMID:32647610 is_a: NCBITaxon:715989 ! sordariomyceta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:147549 name: Pezizomycetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147538 ! Pezizomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:147550 name: Sordariomycetes namespace: ncbi_taxonomy synonym: "Pyrenomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:715989 ! sordariomyceta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:147551 name: Sordariomycetes incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:437799 xref: GC_ID:1 is_a: NCBITaxon:147550 ! Sordariomycetes [Term] id: NCBITaxon:147555 name: Taphrinomycetes namespace: ncbi_taxonomy synonym: "Archiascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:451866 ! Taphrinomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:147705 name: Globisporangium megalacanthum namespace: ncbi_taxonomy synonym: "Pythium megalacanthum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:147881 name: Cylindrocladiella peruviana namespace: ncbi_taxonomy synonym: "Cylindrocladium peruvianum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:137494 ! Cylindrocladiella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1478969 name: Streptocarpinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:214607 ! Trichosporeae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:148100 name: Dothideales incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5014 ! Dothideales [Term] id: NCBITaxon:148305 name: Pyricularia grisea namespace: ncbi_taxonomy alt_id: NCBITaxon:29878 alt_id: NCBITaxon:41252 alt_id: NCBITaxon:5138 alt_id: NCBITaxon:89476 synonym: "Magnaporthe grisea" RELATED synonym [] synonym: "Magnaporthe grisea (T.T. Hebert) M.E. Barr, 1977" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:48558 ! Pyricularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:148311 name: Melanconidaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:172189 xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:148317 name: Melanconis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:148311 ! Melanconidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:148322 name: Apiognomonia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:218102 ! Gnomoniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:148328 name: Gnomonia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:218102 ! Gnomoniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1484362 name: Peronospora rubi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1484953 name: Phacidiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147548 ! Leotiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1485176 name: Macrosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1485177 name: Hendersonia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1485185 name: Patellina namespace: ncbi_taxonomy synonym: "Patellina" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:205932 ! Pezizomycotina incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1489341 name: Osteoglossocephalai namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:32443 ! Teleostei property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1489343 name: Osteoglossocephala namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1489341 ! Osteoglossocephalai property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1489388 name: Euteleosteomorpha namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186625 ! Clupeocephala property_value: has_rank NCBITaxon:cohort [Term] id: NCBITaxon:1489739 name: Characoidei namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7991 ! Characiformes property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:1489793 name: Siluroidei namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7995 ! Siluriformes property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:1489872 name: Percomorphaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:123369 ! Euacanthomorphacea property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1489885 name: Pelagiaria namespace: ncbi_taxonomy alt_id: NCBITaxon:94242 synonym: "Pelagimorpharia" RELATED synonym [] synonym: "Stromateoidei" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1489872 ! Percomorphaceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1489894 name: Scombriformes namespace: ncbi_taxonomy alt_id: NCBITaxon:8223 synonym: "Scombroidei" RELATED synonym [] synonym: "tunas and others" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1489885 ! Pelagiaria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1489904 name: Carangaria namespace: ncbi_taxonomy synonym: "Carangimorpha" RELATED synonym [] synonym: "Carangimorphariae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1489872 ! Percomorphaceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1489907 name: Carangiformes namespace: ncbi_taxonomy alt_id: NCBITaxon:75377 synonym: "Carangoidei" RELATED synonym [] synonym: "jacks and others" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1489904 ! Carangaria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1489908 name: Ovalentaria namespace: ncbi_taxonomy synonym: "Stiassnyiformes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1489872 ! Percomorphaceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1489910 name: Cichlomorphae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1489908 ! Ovalentaria property_value: has_rank NCBITaxon:superorder [Term] id: NCBITaxon:1489911 name: Cichliformes namespace: ncbi_taxonomy alt_id: NCBITaxon:1489912 synonym: "cichlids and convict blennies" EXACT genbank_common_name [] synonym: "Pholidichthyiformes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:1489910 ! Cichlomorphae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1489922 name: Eupercaria namespace: ncbi_taxonomy synonym: "Percomorpharia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1489872 ! Percomorphaceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1489930 name: Ephippiformes namespace: ncbi_taxonomy synonym: "spadefishes and sicklefishes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1489922 ! Eupercaria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1491576 name: Magnaporthiopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:81093 ! Magnaporthaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1494119 name: Streptomyces sp. cr30 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2593676 ! unclassified Streptomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1494812 name: Botryosphaeria sp. kaf2-N2 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2641561 ! unclassified Botryosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1494822 name: Diaporthe sp. kaf2-Y3 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2604179 ! unclassified Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1494841 name: Phomopsis sp. kaf1-XS(2) namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2618327 ! unclassified Phomopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1496883 name: Pseudomonas sp. acu86 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:196821 ! unclassified Pseudomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1498287 name: Rhizoctonia solani AG-A namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:456999 ! Rhizoctonia solani [Term] id: NCBITaxon:1500418 name: unclassified Phytopythium namespace: ncbi_taxonomy alt_id: NCBITaxon:2638316 synonym: "unclassified Ovatisporangium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:795339 ! Phytopythium [Term] id: NCBITaxon:1501335 name: Xanthomonas sp. pist7 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2643310 ! unclassified Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1501798 name: Fusarium solani f. sp. passiflorae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:169388 ! Fusarium solani property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:150284 name: Garlic virus X namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2843479 ! Acarallexivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:150364 name: Acrodontium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:668547 ! Teratosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1503930 name: Graphiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5592 ! Microascales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1503932 name: Graphium namespace: ncbi_taxonomy alt_id: NCBITaxon:888779 synonym: "Graphium" EXACT scientific_name [] synonym: "Rhexographium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1503930 ! Graphiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1508183 name: Neodevriesiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2726947 ! Mycosphaerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:151043 name: Tulare apple mosaic virus namespace: ncbi_taxonomy synonym: "TAMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1510663 name: Paratylenchus projectus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:293601 ! Paratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1510666 name: Rotylenchulus borealis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211163 ! Rotylenchulus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1511808 name: Alphapartitivirus namespace: ncbi_taxonomy synonym: "Alphacryptovirus" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:11012 ! Partitiviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1513233 name: Benyviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732543 ! Hepelivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1513527 name: Sweet potato leaf curl Uganda virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1513572 name: Gymnosporangium kernianum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5265 ! Gymnosporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1520274 name: Nicotiana tabacum/Hyoscyamus niger cybrid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1159853 ! unclassified Solanaceae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1520881 name: OSLEUM clade namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147547 ! Lecanoromycetes property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:152318 name: Monochaetia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1812776 ! Sporocadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:152647 name: Trichosphaeriales namespace: ncbi_taxonomy alt_id: NCBITaxon:227042 xref: GC_ID:1 is_a: NCBITaxon:147551 ! Sordariomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:152648 name: Trichosphaeriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:152647 ! Trichosphaeriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:152655 name: Diaporthales incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:123613 xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales [Term] id: NCBITaxon:152786 name: Syspastospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:72984 ! Ceratostomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:152787 name: Syspastospora parasitica namespace: ncbi_taxonomy synonym: "Sphaeronaema parasiticum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:152786 ! Syspastospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1528196 name: Acrostalagmus sp. ca_besc_24b namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2623535 ! unclassified Acrostalagmus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1528257 name: Aureobasidium sp. nwa_sqmc_25_5f namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2647315 ! unclassified Aureobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1528289 name: Drechslera sp. ca_sqma_28_3c namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2634127 ! unclassified Drechslera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1528382 name: Trichoderma sp. nc_cynh_28_3a namespace: ncbi_taxonomy synonym: "Hypocrea sp. nc_cynh_28_3a" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2600217 ! unclassified Trichoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1528672 name: Pyrenochaeta sp. nwa_besc_241a namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2640096 ! unclassified Pyrenochaeta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1528684 name: Ulocladium sp. nwa_sqmc_254d namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2810418 ! unclassified Alternaria sect. Ulocladium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1535325 name: Candida/Lodderomyces clade namespace: ncbi_taxonomy xref: GC_ID:12 is_a: NCBITaxon:766764 ! Debaryomycetaceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1535530 name: Schizoparmaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:218106 alt_id: NCBITaxon:251373 xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:153609 name: Moniliophthora perniciosa namespace: ncbi_taxonomy synonym: "Crinipellis perniciosa" RELATED synonym [] synonym: "Marasmius perniciosus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:221102 ! Moniliophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1538557 name: Rosa sp. cu33,10.VIII.2008 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2245002 ! unclassified Rosa property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:153977 name: Panchaetothripinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45053 ! Thripidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1540003 name: [Setosphaeria] turcica f. sp. sorghi namespace: ncbi_taxonomy synonym: "Setosphaeria turcica f. sp. sorghi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:93612 ! Exserohilum turcicum property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:1541393 name: Slafractonia leguminicola namespace: ncbi_taxonomy synonym: "Rhizoctonia leguminicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1965161 ! Slafractonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1542467 name: Dolichodorus heterocephalus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:398404 ! Dolichodorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1542849 name: Leptosphaeria sp. xz22 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2646915 ! unclassified Leptosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1542858 name: Rhizopus sp. xz12 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2627319 ! unclassified Rhizopus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1543971 name: Phoma sp. std3 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:219025 ! unclassified Phoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1544977 name: Merliniidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1544978 name: Merliniinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1544977 ! Merliniidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:154538 name: Trametes pubescens namespace: ncbi_taxonomy synonym: "Boletus pubescens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1545429 name: Epicoccum sp. psrx-1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2600197 ! unclassified Epicoccum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1546379 name: Rubus aff. wahlbergii MS-2014 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:23216 ! Rubus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:154750 name: Vararia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:68781 ! Lachnocladiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1547594 name: Phytopythium sp. MNS-2014a namespace: ncbi_taxonomy synonym: "Phytopythium MNS-2014a" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1500418 ! unclassified Phytopythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1549741 name: Acidovorax sp. sk40 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2684926 ! unclassified Acidovorax property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1550050 name: Bitylenchus brevilineatus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:293577 ! Bitylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:155126 name: Tilletia horrida namespace: ncbi_taxonomy synonym: "Neovossia horrida" RELATED synonym [] synonym: "rice bunt" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:13289 ! Tilletia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1551618 name: Alternaria sp. aa11.229 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2610821 ! unclassified Alternaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:155171 name: Spilocaea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5023 ! Venturiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:155415 name: Monosporascus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189359 ! Xylariales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:155416 name: Monosporascus cannonballus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:155415 ! Monosporascus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:155616 name: Tremellomycetes namespace: ncbi_taxonomy alt_id: NCBITaxon:165804 alt_id: NCBITaxon:165805 synonym: "Heterobasidiomycetes" RELATED synonym [] synonym: "Tremellomycetidae" EXACT equivalent_name [] xref: GC_ID:1 xref: PMID:26955199 is_a: NCBITaxon:5302 ! Agaricomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:155619 name: Agaricomycetes namespace: ncbi_taxonomy synonym: "Agaricomycetidae sensu Kirk et al. 2001" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:5302 ! Agaricomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:155890 name: Calceolariaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:156207 name: Tritimovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39729 ! Potyviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:156614 name: environmental samples namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:12333 ! unclassified bacterial viruses [Term] id: NCBITaxon:1570301 name: Saccotheciaceae namespace: ncbi_taxonomy synonym: "Aureobasidiaceae" RELATED synonym [] synonym: "Saccotheciei" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5014 ! Dothideales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1571531 name: Erysiphe azaleae namespace: ncbi_taxonomy alt_id: NCBITaxon:1571598 synonym: "Microsphaera azaleae" RELATED synonym [] synonym: "Pseudoidium sp. MUMH0119" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5121 ! Erysiphe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1571554 name: Erysiphe izuensis namespace: ncbi_taxonomy synonym: "Microsphaera izuensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5121 ! Erysiphe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157178 name: Tilletia barclayana namespace: ncbi_taxonomy synonym: "Neovossia barclayana" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:13289 ! Tilletia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157183 name: Tilletia laevis namespace: ncbi_taxonomy synonym: "Tilletia foetida" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:13289 ! Tilletia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157258 name: Alternaria carthami namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2499262 ! Alternaria sect. Porri property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1573 name: Clavibacter namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:85023 ! Microbacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1575 name: Leifsonia xyli namespace: ncbi_taxonomy synonym: "Clavibacter xyli" RELATED synonym [] xref: GC_ID:11 xref: PMID:10826825 xref: PMID:12501368 is_a: NCBITaxon:110932 ! Leifsonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157777 name: Pea streak virus namespace: ncbi_taxonomy synonym: "PeSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157837 name: Oat mosaic virus namespace: ncbi_taxonomy synonym: "OMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:39731 ! Bymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157848 name: Heterodera ciceri namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157849 name: Heterodera cruciferae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157853 name: Heterodera filipjevi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157854 name: Heterodera humuli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157856 name: Heterodera latipons namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157858 name: Heterodera medicaginis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157864 name: Heterodera trifolii namespace: ncbi_taxonomy alt_id: NCBITaxon:2705191 xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:157868 name: Punctoderinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6301 ! Heteroderidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:157869 name: Punctodera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:157868 ! Punctoderinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:157870 name: Punctodera punctata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:157869 ! Punctodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1578914 name: Deightoniella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2528436 ! Pyriculariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1579225 name: Cercospora solani namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1580853 name: Huntiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1028423 ! Ceratocystidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1580861 name: Huntiella moniliformis namespace: ncbi_taxonomy alt_id: NCBITaxon:72030 synonym: "Ceratocystis moniliformis" RELATED synonym [] synonym: "Ceratostomella moniliformis" RELATED synonym [] synonym: "Endoconidiophora moniliformis" RELATED synonym [] synonym: "Ophiostoma moniliforme" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1580853 ! Huntiella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1582909 name: Pleosporineae incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:715340 ! Pleosporineae [Term] id: NCBITaxon:1582974 name: Ceratobasidium theobromae namespace: ncbi_taxonomy alt_id: NCBITaxon:624263 synonym: "Oncobasidium theobromae" RELATED synonym [] synonym: "Thanatephorus theobromae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5251 ! Ceratobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:158332 name: Epidendroideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4747 ! Orchidaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:158389 name: Epidendreae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:158332 ! Epidendroideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:158408 name: Laeliinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:158389 ! Epidendreae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1585427 name: Onagroideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3934 ! Onagraceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1585429 name: Circaeeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1585427 ! Onagroideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1585532 name: Beta vulgaris/Cercospora beticola mixed EST library namespace: ncbi_taxonomy alt_id: NCBITaxon:1585533 synonym: "Beta vulgaris/Cercospora beticola mixed library" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:119167 ! mixed EST libraries property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:158605 name: Trametes coccinea namespace: ncbi_taxonomy synonym: "Polyporus coccineus" RELATED synonym [] synonym: "Pycnoporus coccineus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:158606 name: Trametes sanguinea namespace: ncbi_taxonomy synonym: "Coriolus sanguineus" RELATED synonym [] synonym: "Fabisporus sanguineus" RELATED synonym [] synonym: "Microporus sanguineus" RELATED synonym [] synonym: "Polyporus sanguineus" RELATED synonym [] synonym: "Polystictus sanguineus" RELATED synonym [] synonym: "Pycnoporus sanguineus (L.) Murrill 1904" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:158607 name: Diaporthe helianthi namespace: ncbi_taxonomy alt_id: NCBITaxon:291052 synonym: "Phomopsis helianthi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1589763 name: Acrocalymma medicaginis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1319578 ! Acrocalymma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1590087 name: Diaporthe cucurbitae namespace: ncbi_taxonomy synonym: "Phomopsis cucurbitae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:159075 name: Acremonium namespace: ncbi_taxonomy alt_id: NCBITaxon:1036680 alt_id: NCBITaxon:5043 alt_id: NCBITaxon:561993 synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:162454 ! Hypocreales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:159115 name: Phloeospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1592451 name: Aureobasidium zeae namespace: ncbi_taxonomy alt_id: NCBITaxon:93480 synonym: "Kabatiella zeae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5579 ! Aureobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:15949 name: Zizania namespace: ncbi_taxonomy synonym: "wild rice" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1648031 ! Zizaniinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:159639 name: Helotiales incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:150174 xref: GC_ID:1 is_a: NCBITaxon:5178 ! Helotiales [Term] id: NCBITaxon:159719 name: Fuligo namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1115744 ! Physaraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:159987 name: Dothideomycetes incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:166047 xref: GC_ID:1 is_a: NCBITaxon:147541 ! Dothideomycetes [Term] id: NCBITaxon:160033 name: Zopfiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:160034 name: Zopfia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:160033 ! Zopfiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:160035 name: Zopfia rhizophila namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:160034 ! Zopfia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1602343 name: Mononychellus tanajoa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36937 ! Mononychellus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:160388 name: Alternaria dianthicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2499239 ! Alternaria sect. Dianthicola property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1612261 name: Saccharum aff. villosum Welker 538 namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:25667078 is_a: NCBITaxon:4546 ! Saccharum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:161666 name: Cercospora asparagi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1616824 name: Mucor sp. ht-7 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2621539 ! unclassified Mucor property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:161934 name: Beta vulgaris namespace: ncbi_taxonomy synonym: "beet" EXACT common_name [] synonym: "Beta altissima" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3554 ! Beta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:162103 name: Peronospora trifoliorum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:162120 name: Pseudoperonospora humuli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:143452 ! Pseudoperonospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:162129 name: Sclerospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:162130 name: Sclerospora graminicola namespace: ncbi_taxonomy synonym: "Protomyces graminicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:162129 ! Sclerospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:162140 name: Plasmopara obducens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4780 ! Plasmopara property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:162396 name: Discosia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1812776 ! Sporocadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:162418 name: Seimatosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1812776 ! Sporocadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:162454 name: Hypocreales incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales [Term] id: NCBITaxon:162475 name: Microstromatales namespace: ncbi_taxonomy alt_id: NCBITaxon:165723 xref: GC_ID:1 is_a: NCBITaxon:452283 ! Exobasidiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:162477 name: Microstromatales incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162475 ! Microstromatales [Term] id: NCBITaxon:162481 name: Microbotryomycetes namespace: ncbi_taxonomy synonym: "Microbotryomycetidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:29000 ! Pucciniomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:162484 name: Pucciniomycetes namespace: ncbi_taxonomy synonym: "Urediniomycetidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:29000 ! Pucciniomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:1628854 name: Pyricularia sp. ck2 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2638110 ! unclassified Pyricularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1629108 name: Claviceps sp. hz-1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2670774 ! unclassified Claviceps property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1631749 name: Trichaptum sector namespace: ncbi_taxonomy synonym: "Boletus sector" RELATED synonym [] synonym: "Coriolus sector" RELATED synonym [] synonym: "Hirschioporus sector" RELATED synonym [] synonym: "Microporus sector" RELATED synonym [] synonym: "Polyporus sector" RELATED synonym [] synonym: "Polystictus sector" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40451 ! Trichaptum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:163256 name: Acrocalymma walkeri namespace: ncbi_taxonomy synonym: "Massarina walkeri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1319578 ! Acrocalymma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1634535 name: Neonectria candida namespace: ncbi_taxonomy alt_id: NCBITaxon:112176 alt_id: NCBITaxon:78404 synonym: "Cylindrocarpon ehrenbergii" RELATED synonym [] synonym: "Cylindrocarpon magnusianum" RELATED synonym [] synonym: "Fusarium candidum" RELATED synonym [] synonym: "Nectria ramulariae" RELATED synonym [] synonym: "Neonectria ramulariae" RELATED synonym [] synonym: "Ramularia candida" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:140106 ! Neonectria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:163722 name: Cicereae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2233839 ! IRL clade property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:163725 name: Dalbergieae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:11250829 is_a: NCBITaxon:2231387 ! dalbergioids sensu lato property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:163729 name: Genisteae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2231385 ! core genistoids property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:163735 name: Phaseoleae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2233855 ! indigoferoid/millettioid clade property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:163742 name: Trifolieae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2233839 ! IRL clade property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:163743 name: Fabeae namespace: ncbi_taxonomy synonym: "Vicieae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2233839 ! IRL clade property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:164592 name: Coniocybaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1293513 ! Coniocybales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1647356 name: Ceratobasidium sp. vb-1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2600200 ! unclassified Ceratobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1648017 name: Hordeinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147389 ! Triticeae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1648021 name: Oryzinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147380 ! Oryzeae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1648026 name: Saccharinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147429 ! Andropogoneae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1648028 name: Sorghinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147429 ! Andropogoneae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1648029 name: Tripsacinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147429 ! Andropogoneae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1648030 name: Triticinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147389 ! Triticeae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1648031 name: Zizaniinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147380 ! Oryzeae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:1648033 name: Andropogonodae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147369 ! Panicoideae [Term] id: NCBITaxon:1648036 name: Panicodae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147369 ! Panicoideae [Term] id: NCBITaxon:1648037 name: Poodae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147368 ! Pooideae [Term] id: NCBITaxon:1648038 name: Triticodae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147368 ! Pooideae [Term] id: NCBITaxon:1649487 name: Rhizorhapis namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:24436067 is_a: NCBITaxon:41297 ! Sphingomonadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1651155 name: Thanatephorus sasakii namespace: ncbi_taxonomy synonym: "Corticium sasakii" RELATED synonym [] synonym: "Hypochnus sasakii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5238 ! Thanatephorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1652080 name: Poeae Chloroplast Group 1 (Aveneae type) namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147387 ! Poeae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1653 name: Corynebacteriaceae namespace: ncbi_taxonomy synonym: "Coryneform bacteria" EXACT genbank_common_name [] xref: GC_ID:11 xref: PMID:19244447 xref: PMID:27864136 xref: PMID:30186281 is_a: NCBITaxon:85007 ! Mycobacteriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1654067 name: Pantoea agglomerans group namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:53335 ! Pantoea property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:165778 name: Nakataea oryzae namespace: ncbi_taxonomy alt_id: NCBITaxon:1930697 alt_id: NCBITaxon:54966 synonym: "Curvularia sigmoidea" RELATED synonym [] synonym: "Helminthosporium sigmoideum" RELATED synonym [] synonym: "Leptosphaeria salvinii" RELATED synonym [] synonym: "Magnaporthe salvinii" RELATED genbank_synonym [] synonym: "Magnaporthe salvinii" RELATED synonym [] synonym: "Nakataea sigmoidea" RELATED synonym [] synonym: "Phragmoporthe salvinii" RELATED synonym [] synonym: "Sclerotium oryzae" RELATED synonym [] synonym: "Vakrabeeja sigmoidea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:228882 ! Nakataea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:165796 name: Eballistraceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62913 ! Georgefischeriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:165797 name: Eballistra namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:165796 ! Eballistraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1658452 name: Cephalotrichum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5593 ! Microascaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:165869 name: Anguina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:114894 ! Anguininae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:166006 name: Anguina tritici namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:165869 ! Anguina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:166009 name: Ditylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:114894 ! Anguininae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:166010 name: Ditylenchus destructor namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:166009 ! Ditylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:166011 name: Ditylenchus dipsaci namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:166009 ! Ditylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1664737 name: Cylindrocladium sp. ecyt-2 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2641080 ! unclassified Cylindrocladium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:166633 name: Cladosporium cucumerinum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5498 ! Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1667020 name: Torulaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:92860 ! Pleosporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1667166 name: Stachybotryaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:2980326 xref: GC_ID:1 xref: PMID:27616791 is_a: NCBITaxon:5125 ! Hypocreales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1670439 name: Helicobasidiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:432027 ! Helicobasidiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1671257 name: Candidatus Marinoplasma namespace: ncbi_taxonomy synonym: "Marinoplasma" EXACT equivalent_name [] xref: GC_ID:4 xref: PMID:26032917 xref: PMID:7857801 xref: PMID:8123559 is_a: NCBITaxon:2092 ! Mycoplasmataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:16714 name: Juglandaceae namespace: ncbi_taxonomy synonym: "walnut family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3502 ! Fagales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:16718 name: Juglans namespace: ncbi_taxonomy synonym: "walnuts" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:16714 ! Juglandaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:16719 name: Juglans nigra namespace: ncbi_taxonomy synonym: "black walnut" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:16718 ! Juglans property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:167353 name: Inocutis dryophila namespace: ncbi_taxonomy alt_id: NCBITaxon:1838042 synonym: "Inocutis dryophila (Berk.) Fiasson & Niemela, 1984" RELATED synonym [] synonym: "Inonotus dryophilus" EXACT equivalent_name [] synonym: "Polyporus dryophilus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:184121 ! Inocutis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:167359 name: Onnia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40424 ! Hymenochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:167361 name: Onnia tomentosa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:167359 ! Onnia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:167366 name: Fuscoporia ferrea namespace: ncbi_taxonomy synonym: "Phellinus ferreus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:175855 ! Fuscoporia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:167368 name: Fuscoporia ferruginosa namespace: ncbi_taxonomy synonym: "Boletus ferruginosus" RELATED synonym [] synonym: "Phellinus ferruginosus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:175855 ! Fuscoporia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:167922 name: Clerodendrum thomsoniae namespace: ncbi_taxonomy synonym: "bleeding-heart vine" EXACT common_name [] synonym: "Clerodendrum thomsonae" RELATED synonym [] synonym: "glory-bower" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:13432 ! Clerodendrum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:167998 name: Anemone coronaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:22868 ! Anemone property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:168172 name: Puccinia striiformis f. sp. tritici namespace: ncbi_taxonomy synonym: "stripe rust fungus" EXACT common_name [] synonym: "wheat yellow rust fungus" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:27350 ! Puccinia striiformis property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:1682384 name: Microdochium albescens namespace: ncbi_taxonomy alt_id: NCBITaxon:87749 synonym: "Gerlachia oryzae" RELATED synonym [] synonym: "Griphosphaerella albescens" RELATED synonym [] synonym: "Metasphaeria albescens" RELATED synonym [] synonym: "Monographella albes" RELATED synonym [] synonym: "Monographella albescens" RELATED synonym [] synonym: "rice leaf scald" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:67608 ! Microdochium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1682391 name: Microdochium sorghi namespace: ncbi_taxonomy alt_id: NCBITaxon:5563 synonym: "Gloeocercospora sorghi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:67608 ! Microdochium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1682405 name: Microdochiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1682492 name: Candidatus Tachikawaea namespace: ncbi_taxonomy synonym: "Tachikawaea" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:25264255 xref: PMID:7857801 xref: PMID:8123559 is_a: NCBITaxon:84563 ! ant, tsetse, mealybug, aphid, etc. endosymbionts property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:169388 name: Fusarium solani namespace: ncbi_taxonomy alt_id: NCBITaxon:1036223 alt_id: NCBITaxon:1127605 alt_id: NCBITaxon:1127606 alt_id: NCBITaxon:1127607 alt_id: NCBITaxon:1127608 alt_id: NCBITaxon:1127609 alt_id: NCBITaxon:1173364 alt_id: NCBITaxon:1352966 alt_id: NCBITaxon:1352967 alt_id: NCBITaxon:1353005 alt_id: NCBITaxon:1353006 alt_id: NCBITaxon:1471552 alt_id: NCBITaxon:1510178 alt_id: NCBITaxon:1705383 alt_id: NCBITaxon:1705384 alt_id: NCBITaxon:1705385 alt_id: NCBITaxon:1705386 alt_id: NCBITaxon:1774169 alt_id: NCBITaxon:2518137 alt_id: NCBITaxon:453756 alt_id: NCBITaxon:453757 alt_id: NCBITaxon:487240 alt_id: NCBITaxon:487241 alt_id: NCBITaxon:487244 alt_id: NCBITaxon:487257 alt_id: NCBITaxon:487260 alt_id: NCBITaxon:487268 alt_id: NCBITaxon:487279 alt_id: NCBITaxon:487280 alt_id: NCBITaxon:487286 alt_id: NCBITaxon:487289 alt_id: NCBITaxon:503887 alt_id: NCBITaxon:503899 alt_id: NCBITaxon:503902 alt_id: NCBITaxon:694287 alt_id: NCBITaxon:694296 alt_id: NCBITaxon:697219 alt_id: NCBITaxon:697220 alt_id: NCBITaxon:697222 alt_id: NCBITaxon:697223 alt_id: NCBITaxon:699139 alt_id: NCBITaxon:699141 alt_id: NCBITaxon:699142 alt_id: NCBITaxon:699143 alt_id: NCBITaxon:699144 alt_id: NCBITaxon:699147 alt_id: NCBITaxon:699159 alt_id: NCBITaxon:699161 alt_id: NCBITaxon:875437 synonym: "Fusarium solani (Mart.) Sacc., 1881" RELATED synonym [] synonym: "Fusisporium solani" RELATED synonym [] synonym: "Neocosmospora solani" RELATED synonym [] xref: GC_ID:1 xref: PMID:30728601 is_a: NCBITaxon:232080 ! Fusarium solani species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:169618 name: Ixoroideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:24966 ! Rubiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:169640 name: Coffeeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1968428 ! Bertiereae - Coffeeae clade property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:169697 name: Arecoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4710 ! Arecaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:169700 name: Coryphoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4710 ! Arecaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:169705 name: Cocoseae namespace: ncbi_taxonomy synonym: "Cocoeae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:169697 ! Arecoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:169725 name: Attaleinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:169705 ! Cocoseae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:169748 name: Phoeniceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:169700 ! Coryphoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:169998 name: Phakopsora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:145793 ! Phakopsoraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:169999 name: Phakopsora meibomiae namespace: ncbi_taxonomy synonym: "Physopella meibomiae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:169998 ! Phakopsora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:170000 name: Phakopsora pachyrhizi namespace: ncbi_taxonomy synonym: "Physopella pachyrhizi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:169998 ! Phakopsora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1707699 name: Cercospora sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2638466 ! unclassified Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1707700 name: Cladosporium sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2614628 ! unclassified Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1707701 name: Phoma sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:219025 ! unclassified Phoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1707704 name: Septoria sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2608378 ! unclassified Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:170922 name: Primula malacoides namespace: ncbi_taxonomy synonym: "baby primrose" EXACT common_name [] synonym: "fairy primrose" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:49647 ! Primula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:170924 name: Primula obconica namespace: ncbi_taxonomy synonym: "German primrose" EXACT common_name [] synonym: "poison primrose" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:49647 ! Primula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:170926 name: Primula sinensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:49647 ! Primula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1715220 name: Alternaria sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2610821 ! unclassified Alternaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1715225 name: Curvularia sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2648525 ! unclassified Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1715232 name: Guignardia sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2648488 ! unclassified Guignardia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1715236 name: Mucor sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2621539 ! unclassified Mucor property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1715245 name: Phomopsis sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2618327 ! unclassified Phomopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1715249 name: Scytalidium sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2632780 ! unclassified Scytalidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1715255 name: Xylaria sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:1565163 xref: GC_ID:1 is_a: NCBITaxon:2604348 ! unclassified Xylaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1716 name: Corynebacterium namespace: ncbi_taxonomy alt_id: NCBITaxon:144193 synonym: "Turicella" RELATED synonym [] xref: GC_ID:11 xref: PMID:10425754 xref: PMID:19661509 xref: PMID:29760685 xref: PMID:30186281 xref: PMID:7547284 xref: PMID:7547291 xref: PMID:7547293 xref: PMID:8186090 is_a: NCBITaxon:1653 ! Corynebacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:171627 name: Fusarium fujikuroi species complex namespace: ncbi_taxonomy alt_id: NCBITaxon:129368 synonym: "Gibberella fujikuroi complex" RELATED synonym [] xref: GC_ID:1 xref: PMID:23379853 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:171631 name: Fusarium oxysporum species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23379853 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:171637 name: Amygdaloideae namespace: ncbi_taxonomy alt_id: NCBITaxon:171636 alt_id: NCBITaxon:721786 synonym: "Maloideae" RELATED synonym [] synonym: "Spiraeoideae" RELATED synonym [] xref: GC_ID:1 xref: PMID:24631854 is_a: NCBITaxon:3745 ! Rosaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:171638 name: Rosoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3745 ! Rosaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:171910 name: Campanula carpatica namespace: ncbi_taxonomy synonym: "tussock bellflower" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:40568 ! Campanula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:171960 name: Vitis sp. cv. 'Norton' namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2448771 ! unclassified Vitis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1720 name: Corynebacterium sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:2182338 synonym: "Turicella sp." RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:2624378 ! unclassified Corynebacterium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:172190 name: Coniella namespace: ncbi_taxonomy alt_id: NCBITaxon:187251 synonym: "Pilidiella" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1535530 ! Schizoparmaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:172192 name: Diaporthe arctii namespace: ncbi_taxonomy synonym: "Phomopsis arctii" RELATED synonym [] synonym: "Sphaeria arctii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:172195 name: Endothiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5117 ! Valsaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:172196 name: Endothiella gyrosa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:172195 ! Endothiella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1728959 name: Aurantioideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:23513 ! Rutaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:173179 name: Pestalotiopsis adusta namespace: ncbi_taxonomy alt_id: NCBITaxon:858361 synonym: "Pestalotia adusta" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37840 ! Pestalotiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:173182 name: Pestalotiopsis disseminata namespace: ncbi_taxonomy synonym: "Pestalotia disseminata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37840 ! Pestalotiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:173185 name: Pestalotiopsis palmarum namespace: ncbi_taxonomy alt_id: NCBITaxon:63219 synonym: "Pestalotia palmarum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37840 ! Pestalotiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:173188 name: Pestalotiopsis sydowiana namespace: ncbi_taxonomy alt_id: NCBITaxon:582803 synonym: "Pestalotia sydowiana" RELATED synonym [] synonym: "Pestalotiopsis guepinii var. macrotricha" RELATED synonym [] synonym: "Pestalotiopsis macrotricha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37840 ! Pestalotiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:173343 name: Oligoplites namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:8157 ! Carangidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:173344 name: Oligoplites saurus namespace: ncbi_taxonomy synonym: "leatherjack" EXACT genbank_common_name [] synonym: "Scomber saurus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:173343 ! Oligoplites property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:173353 name: Trichiurinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:27770 ! Trichiuridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:173369 name: Cephaleuros namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:35445 ! Trentepohliaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:173371 name: Cephaleuros virescens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:173369 ! Cephaleuros property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:173901 name: Globisporangium proliferatum namespace: ncbi_taxonomy synonym: "Pythium proliferatum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:175104 name: Primula vulgaris namespace: ncbi_taxonomy alt_id: NCBITaxon:87537 synonym: "Primula acaulis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:49647 ! Primula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1755431 name: Leptosphaeria sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2646915 ! unclassified Leptosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1756115 name: Coniothyrium sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2641852 ! unclassified Coniothyrium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1756117 name: Ascochyta sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2646288 ! unclassified Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1758100 name: Impatiens subgen. Impatiens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:35939 ! Impatiens property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:175855 name: Fuscoporia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40424 ! Hymenochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1760 name: Actinomycetes namespace: ncbi_taxonomy alt_id: NCBITaxon:85003 synonym: "Actinobacteria Stackebrandt et al. 1997" RELATED synonym [] synonym: "Actinomycetia" RELATED synonym [] synonym: "high G+C Gram-positive bacteria" EXACT genbank_common_name [] synonym: "high G+C Gram-positive bacteria" RELATED blast_name [] xref: GC_ID:11 xref: PMID:10028260 xref: PMID:11155976 xref: PMID:11321122 xref: PMID:19244447 xref: PMID:28840812 xref: PMID:30186281 is_a: NCBITaxon:201174 ! Actinomycetota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:176278 name: Ramularia sp. ascomyc2 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2642784 ! unclassified Ramularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:176297 name: Zea mays/Colletotrichum graminicola mixed EST library namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119167 ! mixed EST libraries property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1765026 name: Oxyporus namespace: ncbi_taxonomy alt_id: NCBITaxon:40447 synonym: "Oxyporus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:574935 ! Schizoporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1768090 name: Ceratobasidium sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2600200 ! unclassified Ceratobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1769247 name: Fomitopsidaceae namespace: ncbi_taxonomy synonym: "Daedaleaceae" RELATED synonym [] synonym: "Piptoporaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1769365 name: Rosellinia sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2646176 ! unclassified Rosellinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1769370 name: Graphium sp. (in: ascomycete fungi) namespace: ncbi_taxonomy synonym: "Graphium sp." RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2689066 ! unclassified Graphium (in: ascomycete fungi) property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1769459 name: Chaetomellaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2794007 ! Chaetomellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1770170 name: Neoascochyta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1770251 name: Phomatodes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1770253 name: Xenodidymella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1771353 name: Rotylenchulus parvus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211163 ! Rotylenchulus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:178114 name: Phaeoseptoria namespace: ncbi_taxonomy synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:129384 ! Ascomycota incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:178144 name: Leptosphaeria weimeri namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5021 ! Leptosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:178154 name: Phaeosphaeria herpotrichoides namespace: ncbi_taxonomy synonym: "Leptosphaeria herpotrichoides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55067 ! Phaeosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:178295 name: Heptageniidae namespace: ncbi_taxonomy synonym: "flatheaded mayflies" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:185810 ! Setisura property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1783272 name: Terrabacteria group namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:18988685 xref: PMID:23851394 is_a: NCBITaxon:2 ! Bacteria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:179343 name: Pseudocercospora cruenta namespace: ncbi_taxonomy synonym: "Cercospora cruenta" RELATED synonym [] synonym: "Mycosphaerella cruenta" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131324 ! Pseudocercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:179360 name: Carangoides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:8157 ! Carangidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1798896 name: Clypeosphaerella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1799696 name: Sporidiobolaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:231213 ! Sporidiobolales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1804621 name: Betoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1804623 ! Chenopodiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1804623 name: Chenopodiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3524 ! Caryophyllales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1807034 name: Phomopsis phaseoli namespace: ncbi_taxonomy synonym: "Phoma phaseoli" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34399 ! Phomopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:180772 name: Vaccinium vitis-idaea namespace: ncbi_taxonomy synonym: "cowberry" EXACT common_name [] synonym: "lingenberry" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:13749 ! Vaccinium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1811811 name: Apiospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:106263 ! Apiosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1812776 name: Sporocadaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1910953 alt_id: NCBITaxon:2502032 alt_id: NCBITaxon:2502033 synonym: "Bartaliniaceae" RELATED synonym [] synonym: "Discosiaceae" RELATED synonym [] synonym: "Pestalotiopsidaceae" RELATED synonym [] xref: GC_ID:1 xref: PMID:30584265 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:182036 name: Xeromphalina fraxinophila namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:71922 ! Xeromphalina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1822375 name: Elsinoe coryli namespace: ncbi_taxonomy synonym: "Sphaceloma coryli" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40996 ! Elsinoe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1824618 name: Cuscuta subgen. Grammica namespace: ncbi_taxonomy synonym: "Grammica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4128 ! Cuscuta property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:1824621 name: Cuscuta subgen. Cuscuta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4128 ! Cuscuta property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:1824641 name: Strigulales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1824899 name: Cuscuta sect. Umbellatae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824618 ! Cuscuta subgen. Grammica property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:1824901 name: Cuscuta sect. Cleistogrammica namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824618 ! Cuscuta subgen. Grammica property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:1824903 name: Cuscuta sect. Indecorae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824618 ! Cuscuta subgen. Grammica property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:1824904 name: Cuscuta sect. Oxycarpae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824618 ! Cuscuta subgen. Grammica property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:1824908 name: Cuscuta sect. Lobostigmae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824618 ! Cuscuta subgen. Grammica property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:1825666 name: Phyllachora maydis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:54961 ! Phyllachora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:182683 name: Globisporangium okanoganense namespace: ncbi_taxonomy alt_id: NCBITaxon:2711121 synonym: "Pythium okanoganense" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1827 name: Rhodococcus namespace: ncbi_taxonomy synonym: "Rhodococcus" EXACT scientific_name [] xref: GC_ID:11 xref: PMID:7547284 xref: PMID:7547293 is_a: NCBITaxon:85025 ! Nocardiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1828 name: Rhodococcus fascians namespace: ncbi_taxonomy alt_id: NCBITaxon:1653479 alt_id: NCBITaxon:36815 synonym: "\"Mycobacterium luteum\" Sohngen 1913" RELATED synonym [] synonym: "Bacterium fascians" RELATED synonym [] synonym: "Corynebacterium fascians" RELATED synonym [] synonym: "Phytomonas fascians" RELATED synonym [] synonym: "Pseudobacterium fasciens" RELATED synonym [] synonym: "Rhodococcus luteus" RELATED synonym [] xref: GC_ID:11 xref: PMID:27284129 is_a: NCBITaxon:1827 ! Rhodococcus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:182845 name: Calonectria ilicicola namespace: ncbi_taxonomy synonym: "Cylindrocladium parasiticum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2779503 ! Calonectria kyotensis species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:183478 name: Stemphylium lycopersici namespace: ncbi_taxonomy alt_id: NCBITaxon:183481 alt_id: NCBITaxon:2005014 alt_id: NCBITaxon:2005015 alt_id: NCBITaxon:2005016 alt_id: NCBITaxon:2005017 alt_id: NCBITaxon:2005018 synonym: "Stemphylium oblongum" RELATED synonym [] synonym: "Stemphylium plantaginis" RELATED synonym [] synonym: "Stemphylium pruni" RELATED synonym [] synonym: "Stemphylium pyrina" RELATED synonym [] synonym: "Stemphylium sophorae" RELATED synonym [] synonym: "Stemphylium xanthosomae" RELATED synonym [] synonym: "Stemphylium xanthosomatis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:95729 ! Stemphylium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:183585 name: Peach mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40276 ! Trichovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1836197 name: Aureobasidium lini namespace: ncbi_taxonomy alt_id: NCBITaxon:93479 synonym: "Aureobasidium pullulans var. lini" RELATED synonym [] synonym: "Kabatiella lini" RELATED synonym [] synonym: "Microstroma lini" RELATED synonym [] synonym: "Polyspora lini" RELATED synonym [] synonym: "Pullularia pullulans var. lini" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5579 ! Aureobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1836667 name: Fomitopsis nivosa namespace: ncbi_taxonomy synonym: "Leptoporus nivosus" RELATED synonym [] synonym: "Pilatoporus nivosus" RELATED synonym [] synonym: "Polyporus nivosus" RELATED synonym [] synonym: "Trametes nivosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34474 ! Fomitopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:184027 name: Golovinomyces namespace: ncbi_taxonomy alt_id: NCBITaxon:1269797 synonym: "Euoidium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:184121 name: Inocutis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40424 ! Hymenochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:184208 name: Psathyrellaceae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:2982305 ! Agaricineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:184412 name: Ceratobasidium ramicola namespace: ncbi_taxonomy alt_id: NCBITaxon:2082607 alt_id: NCBITaxon:358907 alt_id: NCBITaxon:360956 synonym: "Ceratorhiza ramicola" RELATED synonym [] synonym: "Rhizoctonia ramicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5251 ! Ceratobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:184431 name: Coprinopsis namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:184208 ! Psathyrellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1844578 name: Streptocarpus subgen. Streptocarpella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:26254 ! Streptocarpus property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:184462 name: Hyaloperonospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:184471 name: Sporotrichum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:139065 ! Agaricomycotina incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:184478 name: Cuscuta approximata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824621 ! Cuscuta subgen. Cuscuta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1849804 name: Helminthosporium sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2631499 ! unclassified Helminthosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1851551 name: Mrakiaceae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:26955199 is_a: NCBITaxon:90883 ! Cystofilobasidiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1855366 name: Grovesinia moricola namespace: ncbi_taxonomy alt_id: NCBITaxon:38450 synonym: "Botrytis moricola" RELATED synonym [] synonym: "Cristulariella moricola" RELATED synonym [] synonym: "Hinomyces moricola" RELATED synonym [] synonym: "Sclerotinia moricola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:54681 ! Grovesinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:185651 name: Fusarium sulphureum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:185692 name: Passion fruit yellow mosaic virus namespace: ncbi_taxonomy synonym: "PFYMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3048245 ! Tymovirus passiflorae [Term] id: NCBITaxon:185751 name: Pospiviroidae namespace: ncbi_taxonomy synonym: "Viroids" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:10239 ! Viruses property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:185752 name: Avsunviroidae namespace: ncbi_taxonomy synonym: "Viroids" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:10239 ! Viruses property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:185753 name: Pospiviroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185751 ! Pospiviroidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:185754 name: Cocadviroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185751 ! Pospiviroidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:185758 name: Avsunviroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185752 ! Avsunviroidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:185759 name: Pelamoviroid namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:185752 ! Avsunviroidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:185810 name: Setisura namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:30073 ! Ephemeroptera property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:185820 name: Epeorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:178295 ! Heptageniidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1859696 name: Albifimbria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1667166 ! Stachybotryaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1859699 name: Albifimbria verrucaria namespace: ncbi_taxonomy alt_id: NCBITaxon:5532 synonym: "Myrothecium verrucaria" RELATED synonym [] synonym: "Peziza verrucaria" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1859696 ! Albifimbria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1859940 name: Paramyrothecium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1667166 ! Stachybotryaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1859971 name: Paramyrothecium roridum namespace: ncbi_taxonomy alt_id: NCBITaxon:62969 synonym: "Myrothecium roridum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1859940 ! Paramyrothecium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:186265 name: Cactoideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:21613084 is_a: NCBITaxon:3593 ! Cactaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:186276 name: Rhipsalideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186265 ! Cactoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:1862977 name: Pythium sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:228096 ! unclassified Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:186328 name: Entomoplasmatales namespace: ncbi_taxonomy xref: GC_ID:4 is_a: NCBITaxon:31969 ! Mollicutes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:186329 name: Acholeplasmatales namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:11321122 xref: PMID:15653928 is_a: NCBITaxon:31969 ! Mollicutes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:186354 name: Cephalotrichum stemonitis namespace: ncbi_taxonomy synonym: "Doratomyces stemonitis" RELATED synonym [] synonym: "Isaria stemonitis" RELATED synonym [] synonym: "Periconia stemonitis" RELATED synonym [] synonym: "Stysanus stemonitis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1658452 ! Cephalotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:186525 name: Physalospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:87837 ! Hyponectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:186533 name: Cavemovirus namespace: ncbi_taxonomy synonym: "Cassava vein mosaic-like viruses" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:186534 ! Caulimoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:186534 name: Caulimoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2169561 ! Ortervirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:186623 name: Actinopteri namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7898 ! Actinopterygii property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:186625 name: Clupeocephala namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1489341 ! Osteoglossocephalai [Term] id: NCBITaxon:186626 name: Otophysi namespace: ncbi_taxonomy synonym: "Otophysa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:32519 ! Ostariophysi property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:186628 name: Characiphysae namespace: ncbi_taxonomy alt_id: NCBITaxon:186629 synonym: "Characiphysi" RELATED synonym [] synonym: "Siluriphysi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:186626 ! Otophysi property_value: has_rank NCBITaxon:superorder [Term] id: NCBITaxon:186634 name: Otomorpha namespace: ncbi_taxonomy synonym: "Ostarioclupeomorpha" RELATED synonym [] synonym: "Otocephala" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:186625 ! Clupeocephala property_value: has_rank NCBITaxon:cohort [Term] id: NCBITaxon:1866852 name: Muyocopronaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2576765 ! Muyocopronales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:186817 name: Bacillaceae namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:1385 ! Bacillales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:186886 name: Pomovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675071 ! Virgaviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1871264 name: Lasiodiplodia laeliocattleyae namespace: ncbi_taxonomy alt_id: NCBITaxon:2082002 alt_id: NCBITaxon:371122 synonym: "Diplodia laeliocattleyae Sibilia, 1927" RELATED synonym [] synonym: "Lasiodiplodia laeliocattleyae (Sibilia) A. Alves, 2016" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:66739 ! Lasiodiplodia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:187235 name: Ophiognomonia leptostyla namespace: ncbi_taxonomy synonym: "Gnomonia leptostyla" RELATED synonym [] synonym: "Marssoniella juglandis" RELATED synonym [] synonym: "Sphaeria leptostyla" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:494041 ! Ophiognomonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:187236 name: Leucostoma auerswaldii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5118 ! Leucostoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1873266 name: Neopseudocercosporella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1873267 name: Neopseudocercosporella brassicae namespace: ncbi_taxonomy alt_id: NCBITaxon:161656 alt_id: NCBITaxon:2059745 synonym: "Asteroma brassicae" RELATED synonym [] synonym: "Asteromella brassicae" RELATED synonym [] synonym: "Mycosphaerella brassicicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1873266 ! Neopseudocercosporella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1873268 name: Neopseudocercosporella capsellae namespace: ncbi_taxonomy alt_id: NCBITaxon:2082006 alt_id: NCBITaxon:237468 synonym: "Cercoseptoria capsellae" RELATED synonym [] synonym: "Cylindrosporium capsellae" RELATED synonym [] synonym: "Mycosphaerella capsellae" RELATED synonym [] synonym: "Pseudocercosporella capsellae (Ellis & Everh.) Deighton 1973" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1873266 ! Neopseudocercosporella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1873447 name: Daucus sect. Daucus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4038 ! Daucus property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:187734 name: Alternaria alternata complex namespace: ncbi_taxonomy synonym: "Alternaria alternata sensu lato" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499237 ! Alternaria sect. Alternaria property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:187858 name: Leptodontidium elatius namespace: ncbi_taxonomy alt_id: NCBITaxon:286666 synonym: "Leptodontium elatius" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:75374 ! Leptodontidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:187910 name: Phyllactinia angulata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:57459 ! Phyllactinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:187977 name: Wild potato mosaic virus namespace: ncbi_taxonomy synonym: "WPMV" BROAD genbank_acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:188096 name: Paralongidorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46001 ! Longidoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:188097 name: Paralongidorus maximus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:188096 ! Paralongidorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1881153 name: Didymella sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:1914425 synonym: "Peyronellaea sp." EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2632349 ! unclassified Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:188195 name: Sclerophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:164592 ! Coniocybaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1883 name: Streptomyces namespace: ncbi_taxonomy alt_id: NCBITaxon:1973 alt_id: NCBITaxon:31945 alt_id: NCBITaxon:65506 synonym: "\"Microstreptospora\" Yan et al." RELATED synonym [] synonym: "Actinopycnidium Krasil'nikov 1962" RELATED synonym [] synonym: "Actinosporangium Krasil'nikov and Yuan 1961" RELATED synonym [] synonym: "Chainia" RELATED synonym [] synonym: "Elytrosporangium Falcao de Morais et al. 1966" RELATED synonym [] synonym: "Kitasatoa Matsumae and Hata 1968 (Approved Lists 1980)" RELATED synonym [] synonym: "Streptoverticillium Baldacci 1958" RELATED synonym [] xref: GC_ID:11 xref: PMID:10843062 xref: PMID:11411701 xref: PMID:1371059 xref: PMID:15023980 xref: PMID:15950131 xref: PMID:16560709 xref: PMID:8590678 xref: PMID:8934906 xref: PMID:9336904 xref: PMID:9731302 is_a: NCBITaxon:2062 ! Streptomycetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:188550 name: Raphignathae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:83145 ! Eleutherengona [Term] id: NCBITaxon:1892769 name: Pseudopithomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:221678 ! Didymosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:189290 name: Meloidogyne namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33285 ! Meloidogyninae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:189291 name: Meloidogyne graminicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:189292 name: Meloidogyne konaensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:189296 name: Paratrichodorus minor namespace: ncbi_taxonomy synonym: "Nanidorus minor" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:70236 ! Paratrichodorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:189314 name: Leptocircini namespace: ncbi_taxonomy alt_id: NCBITaxon:189316 alt_id: NCBITaxon:475298 synonym: "Graphiini" RELATED synonym [] synonym: "kite swallowtails" EXACT genbank_common_name [] synonym: "Lampropterini" RELATED synonym [] synonym: "Teinopalpini" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:42289 ! Papilioninae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:189359 name: Xylariales incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:67607 xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales [Term] id: NCBITaxon:189594 name: Entyloma dahliae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62636 ! Entyloma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1903409 name: Erwiniaceae namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:27620848 is_a: NCBITaxon:91347 ! Enterobacterales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1903410 name: Pectobacteriaceae namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:27620848 is_a: NCBITaxon:91347 ! Enterobacterales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:190391 name: Paratrichodorus allius namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70236 ! Paratrichodorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1904842 name: Coniella quercicola namespace: ncbi_taxonomy alt_id: NCBITaxon:251304 synonym: "Macroplodia quercicola" RELATED synonym [] synonym: "Pilidiella quercicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:172190 ! Coniella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1904844 name: Coniella straminea namespace: ncbi_taxonomy alt_id: NCBITaxon:172187 synonym: "Schizoparme straminea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:172190 ! Coniella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:190486 name: Xanthomonas citri pv. citri str. 306 namespace: ncbi_taxonomy synonym: "Xanthomonas axonopodis pv. citri str. 306" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:611301 ! Xanthomonas citri pv. citri property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:190595 name: Pucciniales incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:200377 synonym: "Uredinales incertae sedis" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales [Term] id: NCBITaxon:190598 name: Uredo namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:190595 ! Pucciniales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:190608 name: Kuehneola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45214 ! Phragmidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:190609 name: Kuehneola uredinis namespace: ncbi_taxonomy synonym: "Uredo uredinis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:190608 ! Kuehneola property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:190610 name: Phragmidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45214 ! Phragmidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:190613 name: Phragmidium rubi-idaei namespace: ncbi_taxonomy synonym: "Puccinia rubi-idaei" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:190610 ! Phragmidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:190615 name: Phragmidium violaceum namespace: ncbi_taxonomy synonym: "Puccinia violacea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:190610 ! Phragmidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:190630 name: Uromyces junci namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5263 ! Uromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:190639 name: Pucciniastrum epilobii namespace: ncbi_taxonomy synonym: "Melampsora epilobii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:60204 ! Pucciniastrum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:190646 name: Tranzschelia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:367877 ! Raveneliaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:190647 name: Tranzschelia discolor namespace: ncbi_taxonomy synonym: "Puccinia discolor" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:190646 ! Tranzschelia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:190649 name: Tranzschelia pruni-spinosae namespace: ncbi_taxonomy alt_id: NCBITaxon:2086690 synonym: "Puccinia pruni-spinosae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:190646 ! Tranzschelia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1909378 name: Bromelioideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4613 ! Bromeliaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:191062 name: Punctodera chalcoensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:157869 ! Punctodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1911599 name: Alphacarmovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2560077 ! Procedovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1911600 name: Betacarmovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2560077 ! Procedovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:191325 name: Apiosporina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5023 ! Venturiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:191326 name: Apiosporina morbosa namespace: ncbi_taxonomy synonym: "black knot" EXACT common_name [] synonym: "Dibotryon morbosum" RELATED synonym [] synonym: "Sphaeria morbosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:191325 ! Apiosporina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1913637 name: Mucoromycota namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:27738200 is_a: NCBITaxon:112252 ! Fungi incertae sedis property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:1914297 name: Quinvirinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675068 ! Betaflexiviridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1914298 name: Trivirinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675068 ! Betaflexiviridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:1914299 name: Robigovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1914297 ! Quinvirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:191435 name: Stereum sanguinolentum namespace: ncbi_taxonomy synonym: "red heart rot" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:5644 ! Stereum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:191640 name: Zygotylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46005 ! Pratylenchinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:191675 name: Enterobacteriaceae incertae sedis namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:543 ! Enterobacteriaceae [Term] id: NCBITaxon:191820 name: Xiphinema diversicaudatum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46002 ! Xiphinema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:191821 name: Xiphinema vuittenezi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46002 ! Xiphinema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1921599 name: Pseudopithomyces maydicus namespace: ncbi_taxonomy alt_id: NCBITaxon:1463504 synonym: "Clasterosporium maydicum" RELATED synonym [] synonym: "Pithomyces maydicus" RELATED synonym [] synonym: "Scheleobrachea maydica" RELATED synonym [] synonym: "Sporidesmium bakeri var. maydicum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1892769 ! Pseudopithomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1928361 name: Cytospora ceratosperma namespace: ncbi_taxonomy alt_id: NCBITaxon:117550 alt_id: NCBITaxon:2039746 synonym: "Diatrype ceratosperma" RELATED synonym [] synonym: "Engizostoma ceratospermum" RELATED synonym [] synonym: "Hypoxylon ceratospermum" RELATED synonym [] synonym: "Nemania ceratosperma" RELATED synonym [] synonym: "Sphaeria ceratosperma" RELATED synonym [] synonym: "Valsa ceratosperma" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:117544 ! Cytospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1930 name: Streptomyces scabiei namespace: ncbi_taxonomy alt_id: NCBITaxon:243711 alt_id: NCBITaxon:243712 alt_id: NCBITaxon:438742 synonym: "Actinomyces scabies" RELATED synonym [] synonym: "Oospora scabies" RELATED synonym [] synonym: "Streptomyces scabies" RELATED synonym [] xref: GC_ID:11 xref: PMID:17911322 xref: PMID:18523205 xref: PMID:21112986 xref: PMID:31913114 is_a: NCBITaxon:1883 ! Streptomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1931354 name: Irpex latemarginatus namespace: ncbi_taxonomy alt_id: NCBITaxon:2056285 alt_id: NCBITaxon:75795 synonym: "Emmia latemarginata" RELATED synonym [] synonym: "Oxyporus latemarginatus" RELATED synonym [] synonym: "Polyporus latemarginatus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5318 ! Irpex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1931355 name: Irpicaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1940564 name: Juglanconis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2041443 ! Juglanconidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1940567 name: Juglanconis juglandina namespace: ncbi_taxonomy alt_id: NCBITaxon:522267 synonym: "Melanconium juglandinum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1940564 ! Juglanconis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:194680 name: Phanerochaete velutina namespace: ncbi_taxonomy synonym: "Thelephora velutina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5305 ! Phanerochaete property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:194685 name: Ceriporia spissa namespace: ncbi_taxonomy synonym: "Polyporus spissus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40427 ! Ceriporia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:194997 name: Baltazaria galactina namespace: ncbi_taxonomy synonym: "Corticium galactinum" RELATED synonym [] synonym: "Scytinostroma galactinum" RELATED synonym [] synonym: "Thelephora galactina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2294099 ! Baltazaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1955247 name: Auchenorrhyncha namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7524 ! Hemiptera property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:196109 name: Microdochium bolleyi namespace: ncbi_taxonomy synonym: "Gloeosporium bolleyi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:67608 ! Microdochium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:196159 name: unclassified Sphingomonas namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:13687 ! Sphingomonas [Term] id: NCBITaxon:1965161 name: Slafractonia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:205932 ! Pezizomycotina incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:196821 name: unclassified Pseudomonas namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:286 ! Pseudomonas [Term] id: NCBITaxon:1968428 name: Bertiereae - Coffeeae clade namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1968429 ! Gardenieae complex property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1968429 name: Gardenieae complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:169618 ! Ixoroideae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1971362 name: Cenangiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:66497 synonym: "Hemiphacidiaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5178 ! Helotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:197562 name: Pancrustacea namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:10874751 xref: PMID:11557979 is_a: NCBITaxon:197563 ! Mandibulata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:197563 name: Mandibulata namespace: ncbi_taxonomy synonym: "mandibulates" EXACT common_name [] xref: GC_ID:1 xref: PMID:11557979 xref: PMID:9727836 is_a: NCBITaxon:6656 ! Arthropoda property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:1980410 name: Bunyavirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2497576 ! Ellioviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:1980412 name: Fimoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1980410 ! Bunyavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1980418 name: Phenuiviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1980410 ! Bunyavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1980419 name: Tospoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1980410 ! Bunyavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:1981958 name: Pseudomicrostroma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162477 ! Microstromatales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:1985254 name: Xanthomonas phaseoli namespace: ncbi_taxonomy synonym: "Bacillus phaseoli" RELATED synonym [] synonym: "Xanthomonas phaseoli (ex Smith 1897)" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1985699 name: Cytorhabdovirus hordei namespace: ncbi_taxonomy alt_id: NCBITaxon:656083 synonym: "Barley yellow striate mosaic cytorhabdovirus" EXACT equivalent_name [] synonym: "Barley yellow striate mosaic virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:11305 ! Cytorhabdovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:1985704 name: Cytorhabdovirus gramineae namespace: ncbi_taxonomy alt_id: NCBITaxon:100880 synonym: "NCMV" BROAD acronym [] synonym: "Northern cereal mosaic cytorhabdovirus" EXACT equivalent_name [] synonym: "Northern cereal mosaic virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:11305 ! Cytorhabdovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:198655 name: Gymnosporangium juniperi-virginianae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5265 ! Gymnosporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:198656 name: Gymnosporangium libocedri namespace: ncbi_taxonomy synonym: "Phragmidium libocedri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5265 ! Gymnosporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:198672 name: Pileolariaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:198673 name: Pileolaria namespace: ncbi_taxonomy synonym: "Pileolaria" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:198672 ! Pileolariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2 name: Bacteria namespace: ncbi_taxonomy synonym: "bacteria" RELATED blast_name [] synonym: "eubacteria" EXACT genbank_common_name [] synonym: "Monera" RELATED in_part [] synonym: "Procaryotae" RELATED in_part [] synonym: "Prokaryota" RELATED in_part [] synonym: "Prokaryotae" RELATED in_part [] synonym: "prokaryote" RELATED in_part [] synonym: "prokaryotes" RELATED in_part [] xref: GC_ID:11 xref: PMID:10425795 xref: PMID:10425796 xref: PMID:10425797 xref: PMID:10490293 xref: PMID:10843050 xref: PMID:10939651 xref: PMID:10939673 xref: PMID:10939677 xref: PMID:11211268 xref: PMID:11321083 xref: PMID:11321113 xref: PMID:11411719 xref: PMID:11540071 xref: PMID:11542017 xref: PMID:11542087 xref: PMID:11760965 xref: PMID:12054223 xref: PMID:2112744 xref: PMID:270744 xref: PMID:32628106 xref: PMID:36748408 xref: PMID:7520741 xref: PMID:8123559 xref: PMID:8186100 xref: PMID:8590690 xref: PMID:9103655 xref: PMID:9336922 is_a: NCBITaxon:131567 ! cellular organisms property_value: has_rank NCBITaxon:superkingdom [Term] id: NCBITaxon:2009274 name: Hydrangea sect. Macrophyllae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:23109 ! Hydrangea property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2009276 name: Hydrangeeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:23097 ! Hydrangeaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:201174 name: Actinomycetota namespace: ncbi_taxonomy synonym: "Actinobacteraeota" RELATED synonym [] synonym: "Actinobacteria" RELATED synonym [] synonym: "actinobacteria" RELATED blast_name [] synonym: "Actinobacteriota" RELATED synonym [] xref: GC_ID:11 xref: PMID:11837318 xref: PMID:16280504 xref: PMID:29458499 is_a: NCBITaxon:1783272 ! Terrabacteria group property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2016219 name: Wilsonomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2024004 name: Mycenaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:139070 synonym: "Favolaschiaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2982316 ! Marasmiineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:202462 name: Maize bushy stunt phytoplasma namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:3042590 ! 16SrI (Aster yellows group) property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:202566 name: Cherry rasp leaf virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3047742 ! Cheravirus avii [Term] id: NCBITaxon:202710 name: Climacodon namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:81064 ! Meruliaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:202711 name: Climacodon septentrionalis namespace: ncbi_taxonomy synonym: "Hydnum septentrionale" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:202710 ! Climacodon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2028206 name: Cerrenaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2028212 name: Laetiporaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2028218 name: Incrustoporiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:203274 name: Candidatus Phytoplasma oryzae namespace: ncbi_taxonomy synonym: "Rice yellow dwarf phytoplasma" RELATED synonym [] xref: GC_ID:11 xref: PMID:14657124 xref: PMID:7857801 xref: PMID:8123559 is_a: NCBITaxon:85631 ! 16SrXI (Rice yellow dwarf group) property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2033035 name: Hypoxylaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2034 name: Curtobacterium namespace: ncbi_taxonomy alt_id: NCBITaxon:33880 synonym: "Curtibacterium" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:85023 ! Microbacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2035 name: Curtobacterium flaccumfaciens namespace: ncbi_taxonomy synonym: "Bacterium flaccumfaciens" RELATED synonym [] synonym: "Bacterium poinsettiae" RELATED synonym [] synonym: "Corynebacterium betae" RELATED synonym [] synonym: "Corynebacterium flaccumfaciens" RELATED synonym [] synonym: "Corynebacterium flaccumfaciens subsp. betae" RELATED synonym [] synonym: "Corynebacterium flaccumfaciens subsp. flaccumfaciens" RELATED synonym [] synonym: "Corynebacterium flaccumfaciens subsp. oortii" RELATED synonym [] synonym: "Corynebacterium flaccumfaciens subsp. poinsettiae" RELATED synonym [] synonym: "Corynebacterium oortii" RELATED synonym [] synonym: "Corynebacterium poinsettiae" RELATED synonym [] synonym: "Curtibacterium flaccumfaciens" EXACT equivalent_name [] synonym: "Phytomonas flaccumfaciens" RELATED synonym [] synonym: "Phytomonas poinsettiae" RELATED synonym [] synonym: "Pseudomonas flaccumfaciens" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:2034 ! Curtobacterium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2035134 name: Mormyrops namespace: ncbi_taxonomy synonym: "Mormyrops" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:91728 ! Mormyrops property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:2038280 name: Robbsia namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:28190154 is_a: NCBITaxon:119060 ! Burkholderiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:203903 name: Hemileia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2792465 ! Zaghouaniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:203904 name: Hemileia vastatrix namespace: ncbi_taxonomy synonym: "coffee rust fungus" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:203903 ! Hemileia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:204037 name: Dickeya namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:16014461 xref: PMID:19620370 is_a: NCBITaxon:1903410 ! Pectobacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:204038 name: Dickeya dadantii namespace: ncbi_taxonomy alt_id: NCBITaxon:680479 alt_id: NCBITaxon:680483 xref: GC_ID:11 xref: PMID:16014461 xref: PMID:21890733 is_a: NCBITaxon:204037 ! Dickeya property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2041443 name: Juglanconidaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2041450 name: Melanconiellaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:204457 name: Sphingomonadales namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:16403855 is_a: NCBITaxon:28211 ! Alphaproteobacteria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2052682 name: Globisporangium ultimum namespace: ncbi_taxonomy alt_id: NCBITaxon:65071 synonym: "Pythium ultimum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2056292 name: Physisporinus lineatus namespace: ncbi_taxonomy alt_id: NCBITaxon:1631748 synonym: "Microporus lineatus" RELATED synonym [] synonym: "Polyporus lineatus" RELATED synonym [] synonym: "Rigidoporus lineatus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:139433 ! Physisporinus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2056301 name: Rigidoporus corticola namespace: ncbi_taxonomy alt_id: NCBITaxon:406835 synonym: "Oxyporus corticola" RELATED synonym [] synonym: "Polyporus corticola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:81053 ! Rigidoporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:205685 name: Leptosphaerulina trifolii namespace: ncbi_taxonomy alt_id: NCBITaxon:913816 synonym: "Leptosphaerulina briosiana" RELATED synonym [] synonym: "Sphaerulina trifolii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55172 ! Leptosphaerulina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:205686 name: Ascochyta lentis namespace: ncbi_taxonomy alt_id: NCBITaxon:547107 synonym: "Didymella lentis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:205918 name: Pseudomonas syringae pv. syringae B728a namespace: ncbi_taxonomy synonym: "Pseudomonas syringae pv. syringae str. B728a" EXACT equivalent_name [] synonym: "Pseudomonas syringae pv. syringae strain B728a" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:16043691 is_a: NCBITaxon:321 ! Pseudomonas syringae pv. syringae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:205932 name: Pezizomycotina incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:171187 xref: GC_ID:1 is_a: NCBITaxon:147538 ! Pezizomycotina [Term] id: NCBITaxon:2059737 name: Clypeosphaerella calotropidis namespace: ncbi_taxonomy alt_id: NCBITaxon:140764 alt_id: NCBITaxon:244726 synonym: "Cercospora calotropidis" RELATED synonym [] synonym: "Cercosporina calotropidis" RELATED synonym [] synonym: "Cladosporium calotropidis" RELATED synonym [] synonym: "Napicladium calotropidis" RELATED synonym [] synonym: "Passalora calotropidis" RELATED synonym [] synonym: "Phaeoramularia calotropidis" RELATED synonym [] synonym: "Pseudocercospora calotropidis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1798896 ! Clypeosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2059773 name: Zasmidium musigenum namespace: ncbi_taxonomy alt_id: NCBITaxon:648926 synonym: "Veronaea musae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:395590 ! Zasmidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2060158 name: Nothophaeocryptopus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2060159 name: Nothophaeocryptopus gaeumannii namespace: ncbi_taxonomy alt_id: NCBITaxon:64360 synonym: "Adelopus gaeumannii" RELATED synonym [] synonym: "Phaeocryptopus gaeumannii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2060158 ! Nothophaeocryptopus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2062 name: Streptomycetaceae namespace: ncbi_taxonomy synonym: "Actinoplanaceae" RELATED in_part [] xref: GC_ID:11 xref: PMID:12785304 xref: PMID:16560709 xref: PMID:19244447 xref: PMID:27902296 xref: PMID:30186281 is_a: NCBITaxon:85011 ! Kitasatosporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:206311 name: Erythricium salmonicolor namespace: ncbi_taxonomy synonym: "Corticium salmonicolor" RELATED synonym [] synonym: "pink disease" EXACT common_name [] synonym: "pink thread" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:264095 ! Erythricium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2066992 name: Rhodofomes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1769247 ! Fomitopsidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2078541 name: Juxtiphoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2081233 name: Hymenella namespace: ncbi_taxonomy synonym: "Hymenula" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:205932 ! Pezizomycotina incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2082570 name: Phyllostictina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1424649 ! Phyllostictaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:208347 name: Puccinia allii namespace: ncbi_taxonomy synonym: "Xyloma allii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:208426 name: Erysiphe flexuosa namespace: ncbi_taxonomy synonym: "Uncinula flexuosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5121 ! Erysiphe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2085 name: Mycoplasmatales namespace: ncbi_taxonomy alt_id: NCBITaxon:2091 synonym: "Borrelomycetales" RELATED synonym [] synonym: "Mollicutales" RELATED synonym [] synonym: "Mycoplasmas" RELATED synonym [] synonym: "Paramycetales" RELATED synonym [] synonym: "Pleuropneumoniales" RELATED synonym [] synonym: "The Mycoplasmas" EXACT common_name [] xref: GC_ID:4 xref: PMID:16350067 is_a: NCBITaxon:31969 ! Mollicutes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:208515 name: Longidorus breviannulatus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70230 ! Longidorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:208518 name: Xiphinema americanum namespace: ncbi_taxonomy synonym: "American dagger nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:46002 ! Xiphinema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:209114 name: Sperata seenghala namespace: ncbi_taxonomy synonym: "Aoria seenghala" RELATED synonym [] synonym: "Aorichthys seenghala" RELATED synonym [] synonym: "Bagrus seenghala" RELATED synonym [] synonym: "giant river-catfish" EXACT genbank_common_name [] synonym: "Macrones seenghala" RELATED synonym [] synonym: "Mystus seenghala" RELATED synonym [] synonym: "Platystoma seenghala" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:402708 ! Sperata property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2092 name: Mycoplasmataceae namespace: ncbi_taxonomy synonym: "Borrelomycetaceae" RELATED synonym [] synonym: "Parasitaceae" RELATED synonym [] synonym: "Pleuropneumoniaceae" RELATED synonym [] xref: GC_ID:4 xref: PMID:13403276 xref: PMID:16350067 is_a: NCBITaxon:2085 ! Mycoplasmatales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2100475 name: Piptoporellus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2983306 ! Piptoporellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:210567 name: Cadophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159639 ! Helotiales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:210603 name: Cynodon namespace: ncbi_taxonomy synonym: "Cynodon" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:42580 ! Rhaphiodontinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:211154 name: Telotylenchidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:211155 name: Merlinius namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1544978 ! Merliniinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:211158 name: Hoplolaimidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:211159 name: Hoplolaimus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211161 ! Hoplolaiminae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:211160 name: Hoplolaimus galeatus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211159 ! Hoplolaimus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:211161 name: Hoplolaiminae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211158 ! Hoplolaimidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:211162 name: Rotylenchulinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211158 ! Hoplolaimidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:211163 name: Rotylenchulus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211162 ! Rotylenchulinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:211167 name: Criconematoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33283 ! Tylenchomorpha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:211168 name: Criconematidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211167 ! Criconematoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:211169 name: Criconematinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211168 ! Criconematidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:211170 name: Mesocriconema namespace: ncbi_taxonomy alt_id: NCBITaxon:619197 synonym: "Macroposthonia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:619225 ! Macroposthoniinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:211171 name: Mesocriconema xenoplax namespace: ncbi_taxonomy alt_id: NCBITaxon:312909 alt_id: NCBITaxon:312910 alt_id: NCBITaxon:619199 synonym: "Criconemella xenoplax" RELATED synonym [] synonym: "Criconemoides xenoplax" RELATED synonym [] synonym: "Macroposthonia xenoplax" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:211170 ! Mesocriconema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:211172 name: Tylenchulidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211167 ! Criconematoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:211173 name: Tylenchulinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211172 ! Tylenchulidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:211180 name: Tylenchinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:114893 ! Tylenchidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:211181 name: Tylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211180 ! Tylenchinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:211184 name: Triplonchida namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33218 ! Enoplia property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:211185 name: Diphtherophorina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211184 ! Triplonchida property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:211186 name: Trichodoroidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211185 ! Diphtherophorina property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:211187 name: Trichodoridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211186 ! Trichodoroidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:211188 name: Diphtherophoroidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211185 ! Diphtherophorina property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:211189 name: Diphtherophoridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211188 ! Diphtherophoroidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:211190 name: Diphtherophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211189 ! Diphtherophoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:211224 name: Longidoroidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211225 ! Dorylaimina property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:211225 name: Dorylaimina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46000 ! Dorylaimida property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:211524 name: unclassified Phytophthora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora [Term] id: NCBITaxon:2125998 name: Globisporangium spinosum namespace: ncbi_taxonomy alt_id: NCBITaxon:82948 synonym: "Pythium spinosum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2126473 name: Astrosphaeriellaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:92860 ! Pleosporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2131 name: Spiroplasmataceae namespace: ncbi_taxonomy xref: GC_ID:4 xref: PMID:4465679 is_a: NCBITaxon:186328 ! Entomoplasmatales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2132 name: Spiroplasma namespace: ncbi_taxonomy xref: GC_ID:4 xref: PMID:15143041 xref: PMID:4123916 xref: PMID:7857799 xref: PMID:9542070 is_a: NCBITaxon:2131 ! Spiroplasmataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:213547 name: Verophasmatodea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7020 ! Phasmatodea property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:213563 name: Bulimulidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:145428 ! Orthalicoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:213888 name: Dahlia mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3047789 ! Caulimovirus tessellodahliae [Term] id: NCBITaxon:214597 name: Didymocarpoideae namespace: ncbi_taxonomy synonym: "Cyrtandroideae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:26122 ! Gesneriaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:2146 name: Acholeplasmataceae namespace: ncbi_taxonomy synonym: "Sapromycetaceae" RELATED synonym [] synonym: "Saprophytaceae" RELATED synonym [] xref: GC_ID:11 xref: PMID:5487182 is_a: NCBITaxon:186329 ! Acholeplasmatales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:214607 name: Trichosporeae namespace: ncbi_taxonomy alt_id: NCBITaxon:214606 alt_id: NCBITaxon:214608 synonym: "Cyrtandreae" RELATED synonym [] synonym: "Didymocarpeae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:214597 ! Didymocarpoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:21472 name: Gentianaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:84789 synonym: "gentian family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4055 ! Gentianales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:214907 name: Malvoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3629 ! Malvaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:214909 name: Byttnerioideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3629 ! Malvaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:215132 name: Curvularia senegalensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:215458 name: Cercospora zonata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:215465 name: Septoria linicola namespace: ncbi_taxonomy synonym: "Mycosphaerella linicola" RELATED synonym [] synonym: "Phlyctema linicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:215468 name: Mycosphaerella pyri namespace: ncbi_taxonomy synonym: "Septoria pyricola" RELATED synonym [] synonym: "Sphaerella pyri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:41254 ! Mycosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2155 name: Candidatus Phytoplasma sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:2154 alt_id: NCBITaxon:2294113 alt_id: NCBITaxon:44063 synonym: "Mycoplasma-like organism" RELATED synonym [] synonym: "mycoplasma-like organism MLO" RELATED synonym [] synonym: "Mycoplasma-like sp." RELATED synonym [] synonym: "Phytoplasma sp." EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:85635 ! unclassified phytoplasmas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:216305 name: Heterobranchia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6448 ! Gastropoda property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:216307 name: Euthyneura namespace: ncbi_taxonomy synonym: "Euthyneura" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:216305 ! Heterobranchia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:216366 name: Helicina namespace: ncbi_taxonomy synonym: "Helicina" EXACT scientific_name [] synonym: "Helicina Rafinesque, 1815" RELATED synonym [] synonym: "Sigmurethra" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:6527 ! Stylommatophora property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:216706 name: Nepetoideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:33419433 is_a: NCBITaxon:4136 ! Lamiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:216718 name: Mentheae namespace: ncbi_taxonomy synonym: "Nepeteae" RELATED synonym [] xref: GC_ID:1 xref: PMID:33419433 is_a: NCBITaxon:216706 ! Nepetoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:216769 name: Buchnereae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:91896 ! Orobanchaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:216770 name: Orobancheae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:91896 ! Orobanchaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:216836 name: Alternaria triticina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2499258 ! Alternaria sect. Infectoriae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2169561 name: Ortervirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732514 ! Revtraviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2169577 name: Solemoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732553 ! Sobelivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2170033 name: Cassava green mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3047735 ! Nepovirus manihotis [Term] id: NCBITaxon:217035 name: Ericoideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:20193767 is_a: NCBITaxon:4345 ! Ericaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:217037 name: Vaccinioideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4345 ! Ericaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:217046 name: Rhodoreae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:20193767 is_a: NCBITaxon:217035 ! Ericoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:217062 name: Vaccinieae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:217037 ! Vaccinioideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:217269 name: Didymella ligulicola namespace: ncbi_taxonomy synonym: "Phoma ligulicola" RELATED synonym [] synonym: "ray blight fungus" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2172821 name: Multicrustacea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6657 ! Crustacea property_value: has_rank NCBITaxon:superclass [Term] id: NCBITaxon:2174073 name: Berkeleyomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1028423 ! Ceratocystidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:218102 name: Gnomoniaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:218103 xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:218105 name: Cryphonectria-Endothia species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:399129 ! Cryphonectriaceae [Term] id: NCBITaxon:218121 name: Colletotrichum crassipes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:21819 name: Mentha namespace: ncbi_taxonomy synonym: "mints" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:2836337 ! Menthinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:219025 name: unclassified Phoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37463 ! Phoma [Term] id: NCBITaxon:21910 name: Verbenaceae namespace: ncbi_taxonomy synonym: "verbena family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:219102 name: Mutisioideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:18375151 is_a: NCBITaxon:4210 ! Asteraceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:219103 name: Carduoideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:18375151 is_a: NCBITaxon:4210 ! Asteraceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:219120 name: Cichorioideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:18375151 is_a: NCBITaxon:4210 ! Asteraceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:219121 name: Cichorieae namespace: ncbi_taxonomy alt_id: NCBITaxon:102817 synonym: "Lactuceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:219120 ! Cichorioideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:219134 name: Coreopsideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:911341 ! Heliantheae alliance property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:219187 name: Puccinia coronata var. lolii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:27344 ! Puccinia coronata property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:219490 name: Thyatirinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:104425 ! Drepanidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:219653 name: Rigidoporus microporus namespace: ncbi_taxonomy synonym: "Boletus microporus" RELATED synonym [] synonym: "Fomes lignosus" RELATED synonym [] synonym: "Rigidoporus lignosus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:81053 ! Rigidoporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:22002 name: Verbena namespace: ncbi_taxonomy synonym: "vervains" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:908225 ! Verbeneae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2202803 name: Physodermatomycetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2683660 ! Blastocladiomycota incertae sedis property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2202804 name: Physodermatales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2202803 ! Physodermatomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2202805 name: Olpidiomycota namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:112252 ! Fungi incertae sedis property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2202806 name: Olpidiomycotina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2202805 ! Olpidiomycota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:2202807 name: Olpidiomycetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2202806 ! Olpidiomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2202808 name: Olpidiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2202807 ! Olpidiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:220340 name: Bean golden yellow mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:220662 name: Phellinus pomaceus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40470 ! Phellinus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:220671 name: Plenodomus lingam/Leptosphaeria maculans species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014897 is_a: NCBITaxon:118259 ! Plenodomus [Term] id: NCBITaxon:221102 name: Moniliophthora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:654128 ! Marasmiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:221103 name: Moniliophthora roreri namespace: ncbi_taxonomy synonym: "Crinipellis roreri" RELATED synonym [] synonym: "frosty pod rot of cocoa" EXACT common_name [] synonym: "Monilia pod rot of cocoa" EXACT common_name [] synonym: "Monilia roreri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:221102 ! Moniliophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:221167 name: Fusarium xylarioides namespace: ncbi_taxonomy synonym: "Gibberella xylarioides" EXACT equivalent_name [] synonym: "Gibberella xylarioides (nom. inval.)" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2212703 name: Mucoromycetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451507 ! Mucoromycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:221278 name: Curtobacterium flaccumfaciens pv. basellae namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2035 ! Curtobacterium flaccumfaciens [Term] id: NCBITaxon:221518 name: Phytophthora pseudosyringae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:221669 name: Diademaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:92860 ! Pleosporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:221670 name: Cucurbitariaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:715340 ! Pleosporineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:221678 name: Didymosphaeriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:300250 alt_id: NCBITaxon:412505 alt_id: NCBITaxon:85946 synonym: "Montagnulaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1255046 ! Massarineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:221903 name: Leotiomycetes incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147548 ! Leotiomycetes [Term] id: NCBITaxon:222096 name: Pratylenchus neglectus namespace: ncbi_taxonomy alt_id: NCBITaxon:1674145 xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:222543 name: Hypocreomycetidae namespace: ncbi_taxonomy alt_id: NCBITaxon:673183 xref: GC_ID:1 xref: PMID:17572334 is_a: NCBITaxon:147550 ! Sordariomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:222544 name: Sordariomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147550 ! Sordariomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:222545 name: Xylariomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147550 ! Sordariomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:222581 name: Diaporthe melonis namespace: ncbi_taxonomy alt_id: NCBITaxon:222582 xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:223102 name: Orobanche crenata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36747 ! Orobanche property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2231171 name: Synchytriales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451435 ! Chytridiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2231382 name: NPAAA clade namespace: ncbi_taxonomy synonym: "canavanine-accumulating clade" RELATED synonym [] synonym: "non-protein amino acid accumulating clade" RELATED synonym [] xref: GC_ID:1 xref: PMID:21652332 is_a: NCBITaxon:2231393 ! 50 kb inversion clade property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2231384 name: genistoids sensu lato namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:21652332 is_a: NCBITaxon:2231393 ! 50 kb inversion clade property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2231385 name: core genistoids namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2231384 ! genistoids sensu lato property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2231387 name: dalbergioids sensu lato namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:21652332 is_a: NCBITaxon:2231393 ! 50 kb inversion clade property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2231390 name: Pterocarpus clade namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:11250829 is_a: NCBITaxon:163725 ! Dalbergieae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2231393 name: 50 kb inversion clade namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3814 ! Papilionoideae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:223301 name: Pepper golden mosaic virus namespace: ncbi_taxonomy alt_id: NCBITaxon:79009 alt_id: NCBITaxon:94041 synonym: "Pepper golden mosaic geminivirus" EXACT equivalent_name [] synonym: "Serrano golden mosaic geminivirus" EXACT equivalent_name [] synonym: "Serrano golden mosaic virus" EXACT equivalent_name [] synonym: "SGMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:223303 name: Pepper huasteco yellow vein virus namespace: ncbi_taxonomy alt_id: NCBITaxon:28349 synonym: "Pepper huasteco virus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2233838 name: Hologalegina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2231382 ! NPAAA clade property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2233839 name: IRL clade namespace: ncbi_taxonomy synonym: "inverted repeat lacking clade" RELATED synonym [] synonym: "inverted repeat loss clade" RELATED synonym [] synonym: "temperate herbaceous clade" RELATED synonym [] xref: GC_ID:1 xref: PMID:21652332 is_a: NCBITaxon:2233838 ! Hologalegina property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2233855 name: indigoferoid/millettioid clade namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:10719003 xref: PMID:21652332 is_a: NCBITaxon:2231382 ! NPAAA clade property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:224471 name: Burkholderiales genera incertae sedis namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:80840 ! Burkholderiales [Term] id: NCBITaxon:2245002 name: unclassified Rosa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3764 ! Rosa [Term] id: NCBITaxon:2249430 name: Aphyllon namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:216770 ! Orobancheae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:225612 name: Browallia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:424558 ! Browallieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:225613 name: Browallia speciosa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:225612 ! Browallia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:225974 name: Mycosphaerella coffeicola namespace: ncbi_taxonomy synonym: "Cercospora coffeicola" RELATED synonym [] synonym: "Sphaerella coffeicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:41254 ! Mycosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:226117 name: Myrothecium gramineum namespace: ncbi_taxonomy synonym: "Xepiculopsis graminea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5531 ! Myrothecium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:226325 name: Albugo occidentalis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:65356 ! Albugo property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:227062 name: Pithomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2126473 ! Astrosphaeriellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:227290 name: Rhizobium/Agrobacterium group namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:11211278 xref: PMID:13130068 xref: PMID:13130069 is_a: NCBITaxon:82115 ! Rhizobiaceae [Term] id: NCBITaxon:227323 name: Hymenochaetales incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:139380 ! Hymenochaetales [Term] id: NCBITaxon:227964 name: Fomitella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:228096 name: unclassified Pythium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium [Term] id: NCBITaxon:228665 name: Oculimacula namespace: ncbi_taxonomy alt_id: NCBITaxon:228666 synonym: "Helgardia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2316155 ! Ploettnerulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:22868 name: Anemone namespace: ncbi_taxonomy alt_id: NCBITaxon:2995326 synonym: "Anemonastrum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1463147 ! Anemoneae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:228882 name: Nakataea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:81093 ! Magnaporthaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2294099 name: Baltazaria namespace: ncbi_taxonomy synonym: "Baltazaria" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:230759 ! Agaricales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:229470 name: Scutellonema namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211161 ! Hoplolaiminae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:229629 name: unclassified Citrus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2706 ! Citrus [Term] id: NCBITaxon:230004 name: Alternaria consortialis namespace: ncbi_taxonomy synonym: "Macrosporium consortiale" RELATED synonym [] synonym: "Pseudostemphylium consortiale" RELATED synonym [] synonym: "Stemphylium consortiale" RELATED synonym [] synonym: "Ulocladium consortiale" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499266 ! Alternaria sect. Ulocladioides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:230009 name: Alternaria embellisia namespace: ncbi_taxonomy synonym: "Embellisia allii" RELATED synonym [] synonym: "Helminthosporium allii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:57729 ! Alternaria sect. Embellisia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:23012 name: Kalanchoe namespace: ncbi_taxonomy synonym: "Palm-Beach bells" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3781 ! Crassulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:230369 name: Peronospora potentillae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2304100 name: Viteae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3602 ! Vitaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:230425 name: Peronospora aff. ranunculi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:230439 name: Peronospora tabacina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:230759 name: Agaricales incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5338 ! Agaricales [Term] id: NCBITaxon:230838 name: Peronosclerospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:230839 name: Peronosclerospora sorghi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:230838 ! Peronosclerospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:23097 name: Hydrangeaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:37819 synonym: "hydrangea family" EXACT common_name [] xref: GC_ID:1 xref: PMID:21300164 is_a: NCBITaxon:41934 ! Cornales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:231006 name: Trichothecium namespace: ncbi_taxonomy alt_id: NCBITaxon:51911 synonym: "Spicellum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:162454 ! Hypocreales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:23109 name: Hydrangea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2009276 ! Hydrangeeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:23110 name: Hydrangea macrophylla namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2009274 ! Hydrangea sect. Macrophyllae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:231213 name: Sporidiobolales namespace: ncbi_taxonomy alt_id: NCBITaxon:5283 alt_id: NCBITaxon:5284 alt_id: NCBITaxon:5289 alt_id: NCBITaxon:89013 synonym: "Sporidiaceae" RELATED synonym [] synonym: "Sporidiales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:162481 ! Microbotryomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2316155 name: Ploettnerulaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5178 ! Helotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:231640 name: Puccinia asparagi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:231936 name: Phymatotrichopsis omnivora namespace: ncbi_taxonomy alt_id: NCBITaxon:265490 synonym: "Phymatotrichum omnivorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:265489 ! Phymatotrichopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:231958 name: Globisporangium debaryanum namespace: ncbi_taxonomy synonym: "Pythium debaryanum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:232080 name: Fusarium solani species complex namespace: ncbi_taxonomy alt_id: NCBITaxon:450424 synonym: "Fusarium solani complex" EXACT equivalent_name [] synonym: "Nectria haematococca complex" RELATED synonym [] xref: GC_ID:1 xref: PMID:23379853 xref: PMID:30728601 xref: PMID:33200960 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:23211 name: Pyrus communis namespace: ncbi_taxonomy synonym: "pear" EXACT genbank_common_name [] synonym: "Pyrus balansae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3766 ! Pyrus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:23216 name: Rubus namespace: ncbi_taxonomy synonym: "bramble" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1176516 ! Rosoideae incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:232347 name: Magnoliidae namespace: ncbi_taxonomy synonym: "magnoliids" EXACT equivalent_name [] xref: GC_ID:1 xref: PMID:24055602 xref: PMID:25249442 is_a: NCBITaxon:1437183 ! Mesangiospermae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:232378 name: Proteales namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:26724406 is_a: NCBITaxon:1437183 ! Mesangiospermae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:233049 name: Helicobasidium mompa partitivirus V1-1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:344866 ! Helicobasidium mompa partitivirus V70 [Term] id: NCBITaxon:23461 name: Mangifera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4011 ! Anacardiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:23513 name: Rutaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:43704 synonym: "rue family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41937 ! Sapindales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:235275 name: Pseudomonas coronafaciens pv. coronafaciens namespace: ncbi_taxonomy synonym: "Pseudomonas syringae pv. coronafaciens" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:53409 ! Pseudomonas coronafaciens [Term] id: NCBITaxon:235631 name: Crotonoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3977 ! Euphorbiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:235633 name: Euphorbioideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3977 ! Euphorbiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:235883 name: Manihoteae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:235631 ! Crotonoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:235895 name: Euphorbieae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:235633 ! Euphorbioideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:2370 name: Xylella namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:32033 ! Xanthomonadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2371 name: Xylella fastidiosa namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:11321075 xref: PMID:32179972 is_a: NCBITaxon:2370 ! Xylella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:237192 name: Cercospora zebrina namespace: ncbi_taxonomy alt_id: NCBITaxon:687949 xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:237547 name: Ramulispora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:237631 name: Ustilago maydis 521 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5270 ! Ustilago maydis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:238234 name: Crenicichla alta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:50736 ! Crenicichla property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:238244 name: Stenocarpella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:767018 ! Diaporthaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:238245 name: Stenocarpella maydis namespace: ncbi_taxonomy synonym: "Diplodia maydis" RELATED synonym [] synonym: "Sphaeria maydis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:238244 ! Stenocarpella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:238488 name: Genista hirsuta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:49818 ! Genista property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:239373 name: Rotylenchulus reniformis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211163 ! Rotylenchulus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:241690 name: Longidorus africanus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70230 ! Longidorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:241711 name: Discohainesia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1769459 ! Chaetomellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:241770 name: Thecaphora solani namespace: ncbi_taxonomy synonym: "Angiosorus solani" RELATED synonym [] synonym: "potato smut" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:63266 ! Thecaphora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:241778 name: Apioideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:32016402 is_a: NCBITaxon:4037 ! Apiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:241780 name: apioid superclade namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:241778 ! Apioideae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:241789 name: Scandiceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:241778 ! Apioideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:241793 name: Apieae namespace: ncbi_taxonomy alt_id: NCBITaxon:489360 synonym: "Apium clade" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:241780 ! apioid superclade property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:241799 name: Daucinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:241789 ! Scandiceae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:242511 name: Selenophoma namespace: ncbi_taxonomy synonym: "mitosporic Dothideales" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:148100 ! Dothideales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:242520 name: Leucostoma kunzei namespace: ncbi_taxonomy alt_id: NCBITaxon:356881 synonym: "Sphaeria kunzei" RELATED synonym [] synonym: "Valsa kunzei" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5118 ! Leucostoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:243040 name: Phellinus sp. olrim323 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2684947 ! unclassified Phellinus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:243044 name: Cordyceps sp. olrim125 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2602519 ! unclassified Cordyceps property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:243734 name: Xiphinema brevicolle namespace: ncbi_taxonomy alt_id: NCBITaxon:243083 synonym: "Xiphinema brevicollum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:46002 ! Xiphinema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:243741 name: Xiphidorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46001 ! Longidoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:243749 name: Xiphidorus yepesara namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:243741 ! Xiphidorus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:243757 name: Xiphinema setariae/vulgare complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46002 ! Xiphinema [Term] id: NCBITaxon:244176 name: Meloidogyne naasi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2448771 name: unclassified Vitis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3603 ! Vitis [Term] id: NCBITaxon:24674 name: Schizanthus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:424556 ! Schizanthoideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:24735 name: Ulmus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3474 ! Ulmaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:249184 name: Tymoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675063 ! Tymovirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:249340 name: Taphrina aff. virginica 046.1c namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5010 ! Taphrina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:249510 name: Phenacoccus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:30190 ! Pseudococcidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:24966 name: Rubiaceae namespace: ncbi_taxonomy synonym: "madder family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4055 ! Gentianales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2497569 name: Negarnaviricota namespace: ncbi_taxonomy synonym: "Negative-strand RNA viruses" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:2732396 ! Orthornavirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2497570 name: Haploviricotina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2497569 ! Negarnaviricota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:2497571 name: Polyploviricotina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2497569 ! Negarnaviricota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:2497574 name: Monjiviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2497570 ! Haploviricotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2497576 name: Ellioviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2497571 ! Polyploviricotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2499237 name: Alternaria sect. Alternaria namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499238 name: Alternaria sect. Brassicicola namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499239 name: Alternaria sect. Dianthicola namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499257 name: Alternaria sect. Gypsophilae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499258 name: Alternaria sect. Infectoriae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499259 name: Alternaria sect. Japonicae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499262 name: Alternaria sect. Porri namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499265 name: Alternaria sect. Sonchi namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499266 name: Alternaria sect. Ulocladioides namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2499269 name: Alternaria sect. Euphorbiicola namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2502719 name: Sarocladiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:251695 name: Pseudomonas syringae group genomosp. 1 namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:10319466 is_a: NCBITaxon:136849 ! Pseudomonas syringae group property_value: has_rank NCBITaxon:species_subgroup [Term] id: NCBITaxon:251698 name: Pseudomonas syringae group genomosp. 2 namespace: ncbi_taxonomy alt_id: NCBITaxon:251708 xref: GC_ID:11 xref: PMID:10319466 xref: PMID:29270162 is_a: NCBITaxon:136849 ! Pseudomonas syringae group property_value: has_rank NCBITaxon:species_subgroup [Term] id: NCBITaxon:252166 name: Coronophorales namespace: ncbi_taxonomy synonym: "Parasympodiellales" RELATED synonym [] xref: GC_ID:1 xref: PMID:34685383 is_a: NCBITaxon:222543 ! Hypocreomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:252199 name: Sordariomycetidae incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:222544 ! Sordariomycetidae [Term] id: NCBITaxon:252740 name: Valsa sordida namespace: ncbi_taxonomy alt_id: NCBITaxon:509221 synonym: "Cytospora chrysosperma" RELATED synonym [] synonym: "Sphaeria chrysosperma" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:83174 ! Valsa property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:252746 name: Cytospora sacculus namespace: ncbi_taxonomy synonym: "Sphaeria sacculus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:117544 ! Cytospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:252748 name: Cytospora abietis namespace: ncbi_taxonomy alt_id: NCBITaxon:2039744 synonym: "Valsa abietis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:117544 ! Cytospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2528436 name: Pyriculariaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:639021 ! Magnaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:253718 name: Crabronidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34735 ! Apoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:253723 name: Pemphredoninae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:253718 ! Crabronidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:254394 name: Monilia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:254396 name: Monilinia mali namespace: ncbi_taxonomy synonym: "Monilia japonica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:38447 ! Monilinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2546012 name: Chironiinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:303182 ! Chironieae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:2546214 name: TCBD clade namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33103 ! Ulvophyceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:254878 name: Penicillium chrysogenum species complex namespace: ncbi_taxonomy synonym: "Penicillium chrysogenum complex" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium [Term] id: NCBITaxon:255066 name: Pepper veinal mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:255300 name: Lepturacanthus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:173353 ! Trichiurinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2559587 name: Riboviria namespace: ncbi_taxonomy synonym: "RNA viruses" EXACT common_name [] synonym: "RNA viruses and viroids" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:10239 ! Viruses property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:256003 name: Heterobasidion annosum species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:13562 ! Heterobasidion [Term] id: NCBITaxon:2560077 name: Procedovirinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39738 ! Tombusviridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:2560078 name: Regressovirinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39738 ! Tombusviridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:2560196 name: Orthotospovirus namespace: ncbi_taxonomy alt_id: NCBITaxon:11611 synonym: "Tospovirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1980419 ! Tospoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:256320 name: Ganoderma philippii namespace: ncbi_taxonomy alt_id: NCBITaxon:2057916 alt_id: NCBITaxon:219020 synonym: "Fomes philippii" RELATED synonym [] synonym: "Ganoderma phillippii" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:25692 name: Balsaminaceae namespace: ncbi_taxonomy synonym: "touch-me-not family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41945 ! Ericales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2571160 name: Trinickia namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:119060 ! Burkholderiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:257464 name: Potato black ringspot virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3048282 ! Nepovirus solani [Term] id: NCBITaxon:2576765 name: Muyocopronales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:258227 name: Coprinopsis psychromorbida namespace: ncbi_taxonomy synonym: "Coprinus psychromorbidus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:184431 ! Coprinopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:258528 name: Schizanthus grahamii x Schizanthus pinnatus namespace: ncbi_taxonomy synonym: "Schizanthus x wisetonensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:24674 ! Schizanthus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:259221 name: Mycosphaerella sp. sd3aN3c(D) namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2646444 ! unclassified Mycosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2593313 name: unclassified Penicillium namespace: ncbi_taxonomy alt_id: NCBITaxon:2851680 synonym: "unclassified Eupenicillium" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium [Term] id: NCBITaxon:2593666 name: unclassified Fusarium namespace: ncbi_taxonomy alt_id: NCBITaxon:2637425 alt_id: NCBITaxon:2904683 synonym: "unclassified Albonectria" EXACT equivalent_name [] synonym: "unclassified Cyanonectria" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5506 ! Fusarium [Term] id: NCBITaxon:2593676 name: unclassified Streptomyces namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:1883 ! Streptomyces [Term] id: NCBITaxon:259522 name: Didymella maydis namespace: ncbi_taxonomy synonym: "Didymella zeae-maydis" RELATED synonym [] synonym: "Mycosphaerella zeae-maydis" RELATED synonym [] synonym: "Peyronellaea maydis" RELATED synonym [] synonym: "Peyronellaea zeae-maydis" RELATED synonym [] synonym: "Phoma zeae-maydis" RELATED synonym [] synonym: "Phyllosticta maydis" RELATED synonym [] synonym: "yellow leaf blight of maize" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:259995 name: [Hymenula] cerealis namespace: ncbi_taxonomy synonym: "Cephalosporium gramineum" RELATED synonym [] synonym: "Cephalosporium stripe" EXACT common_name [] synonym: "Hymenula cerealis" RELATED synonym [] synonym: "Phialophora cerealis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2081233 ! Hymenella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2600197 name: unclassified Epicoccum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:104397 ! Epicoccum [Term] id: NCBITaxon:2600200 name: unclassified Ceratobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5251 ! Ceratobasidium [Term] id: NCBITaxon:2600217 name: unclassified Trichoderma namespace: ncbi_taxonomy alt_id: NCBITaxon:2696137 synonym: "unclassified Hypocrea" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5543 ! Trichoderma [Term] id: NCBITaxon:2602519 name: unclassified Cordyceps namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45234 ! Cordyceps [Term] id: NCBITaxon:2604179 name: unclassified Diaporthe namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe [Term] id: NCBITaxon:2604346 name: unclassified Colletotrichum namespace: ncbi_taxonomy alt_id: NCBITaxon:2676580 synonym: "unclassified Glomerella (in: Fungi)" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2604348 name: unclassified Xylaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37991 ! Xylaria [Term] id: NCBITaxon:2604748 name: Endomyxa namespace: ncbi_taxonomy synonym: "Endomyxa Cavalier-Smith 2002" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:543769 ! Rhizaria property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2605435 name: Evosea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:554915 ! Amoebozoa property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2607491 name: unclassified Aphelenchoides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:90723 ! Aphelenchoides [Term] id: NCBITaxon:2608312 name: unclassified Bursaphelenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6324 ! Bursaphelenchus [Term] id: NCBITaxon:2608378 name: unclassified Septoria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria [Term] id: NCBITaxon:2610821 name: unclassified Alternaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5598 ! Alternaria [Term] id: NCBITaxon:26122 name: Gesneriaceae namespace: ncbi_taxonomy synonym: "African violet family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2613769 name: unclassified Rhizobium namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:379 ! Rhizobium [Term] id: NCBITaxon:2614581 name: unclassified Hypoxylon namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:42308 ! Hypoxylon [Term] id: NCBITaxon:2614596 name: unclassified Ophiostoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5159 ! Ophiostoma [Term] id: NCBITaxon:261460 name: Chaetosphaeriales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:222544 ! Sordariomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2614628 name: unclassified Cladosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5498 ! Cladosporium [Term] id: NCBITaxon:2618327 name: unclassified Phomopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34399 ! Phomopsis [Term] id: NCBITaxon:2619002 name: unclassified Bipolaris namespace: ncbi_taxonomy alt_id: NCBITaxon:2640461 synonym: "unclassified Cochliobolus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris [Term] id: NCBITaxon:2619772 name: unclassified Myrothecium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5531 ! Myrothecium [Term] id: NCBITaxon:2620159 name: unclassified Oidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62703 ! Oidium [Term] id: NCBITaxon:2620484 name: unclassified Coprinus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5345 ! Coprinus [Term] id: NCBITaxon:2621539 name: unclassified Mucor namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4830 ! Mucor [Term] id: NCBITaxon:2622719 name: unclassified Erwinia namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:551 ! Erwinia [Term] id: NCBITaxon:2623535 name: unclassified Acrostalagmus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:461148 ! Acrostalagmus [Term] id: NCBITaxon:2624378 name: unclassified Corynebacterium namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:1716 ! Corynebacterium [Term] id: NCBITaxon:2624761 name: unclassified Phyllosticta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:121621 ! Phyllosticta [Term] id: NCBITaxon:2624939 name: unclassified Ganoderma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma [Term] id: NCBITaxon:26254 name: Streptocarpus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1478969 ! Streptocarpinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2625667 name: unclassified Trichodorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70243 ! Trichodorus [Term] id: NCBITaxon:2626141 name: unclassified Aecidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:73163 ! Aecidium [Term] id: NCBITaxon:2626222 name: unclassified Phacidiopycnis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:291631 ! Phacidiopycnis [Term] id: NCBITaxon:2627123 name: unclassified Capnodium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62134 ! Capnodium [Term] id: NCBITaxon:2627151 name: unclassified Exobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5406 ! Exobasidium [Term] id: NCBITaxon:2627319 name: unclassified Rhizopus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4842 ! Rhizopus [Term] id: NCBITaxon:2628084 name: unclassified Pleurotus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5320 ! Pleurotus [Term] id: NCBITaxon:2628266 name: unclassified Chalara namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:13000 ! Chalara [Term] id: NCBITaxon:2629660 name: unclassified Melampsora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5260 ! Melampsora [Term] id: NCBITaxon:263004 name: Sweet potato chlorotic fleck virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2631499 name: unclassified Helminthosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:58127 ! Helminthosporium [Term] id: NCBITaxon:2631599 name: unclassified Physalospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186525 ! Physalospora [Term] id: NCBITaxon:2632349 name: unclassified Didymella namespace: ncbi_taxonomy alt_id: NCBITaxon:2685527 synonym: "unclassified Peyronellaea" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella [Term] id: NCBITaxon:2632780 name: unclassified Scytalidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5538 ! Scytalidium [Term] id: NCBITaxon:2634127 name: unclassified Drechslera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33198 ! Drechslera [Term] id: NCBITaxon:2635284 name: unclassified Peniophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40463 ! Peniophora [Term] id: NCBITaxon:2635461 name: unclassified Dianthus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3569 ! Dianthus [Term] id: NCBITaxon:2637901 name: unclassified Spiroplasma namespace: ncbi_taxonomy xref: GC_ID:4 is_a: NCBITaxon:2132 ! Spiroplasma [Term] id: NCBITaxon:2638110 name: unclassified Pyricularia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:48558 ! Pyricularia [Term] id: NCBITaxon:2638466 name: unclassified Cercospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora [Term] id: NCBITaxon:2640096 name: unclassified Pyrenochaeta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:285810 ! Pyrenochaeta [Term] id: NCBITaxon:264095 name: Erythricium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5304 ! Corticiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2641080 name: unclassified Cylindrocladium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40266 ! Cylindrocladium [Term] id: NCBITaxon:2641561 name: unclassified Botryosphaeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45132 ! Botryosphaeria [Term] id: NCBITaxon:2641852 name: unclassified Coniothyrium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:78388 ! Coniothyrium [Term] id: NCBITaxon:2642784 name: unclassified Ramularia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:112497 ! Ramularia [Term] id: NCBITaxon:2642982 name: unclassified Trametes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes [Term] id: NCBITaxon:2643310 name: unclassified Xanthomonas namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:338 ! Xanthomonas [Term] id: NCBITaxon:2643771 name: unclassified Arthrinium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:112177 ! Arthrinium [Term] id: NCBITaxon:2644277 name: unclassified Cryptosporiopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:108533 ! Cryptosporiopsis [Term] id: NCBITaxon:2644322 name: unclassified Bjerkandera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5330 ! Bjerkandera [Term] id: NCBITaxon:2645090 name: unclassified Stemphylium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:95729 ! Stemphylium [Term] id: NCBITaxon:2645834 name: unclassified Phlebia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5307 ! Phlebia [Term] id: NCBITaxon:2645889 name: unclassified Rhizoctonia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1322061 ! Rhizoctonia [Term] id: NCBITaxon:2646109 name: unclassified Paratrichodorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70236 ! Paratrichodorus [Term] id: NCBITaxon:2646176 name: unclassified Rosellinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:77043 ! Rosellinia [Term] id: NCBITaxon:2646288 name: unclassified Ascochyta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta [Term] id: NCBITaxon:2646444 name: unclassified Mycosphaerella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41254 ! Mycosphaerella [Term] id: NCBITaxon:2646915 name: unclassified Leptosphaeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5021 ! Leptosphaeria [Term] id: NCBITaxon:2647315 name: unclassified Aureobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5579 ! Aureobasidium [Term] id: NCBITaxon:2648488 name: unclassified Guignardia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:55180 ! Guignardia [Term] id: NCBITaxon:2648525 name: unclassified Curvularia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia [Term] id: NCBITaxon:2649664 name: unclassified Cylindrocarpon namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:13474 ! Cylindrocarpon [Term] id: NCBITaxon:265355 name: Urocystis agropyri namespace: ncbi_taxonomy synonym: "Uredo agropyri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:63269 ! Urocystis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:265489 name: Phymatotrichopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:44643 ! Rhizinaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:266408 name: Septoria helianthi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:266409 name: Septoria lactucae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2670774 name: unclassified Claviceps namespace: ncbi_taxonomy alt_id: NCBITaxon:2620599 synonym: "unclassified Sphacelia" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5110 ! Claviceps [Term] id: NCBITaxon:267213 name: Ipomoeeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4118 ! Convolvulaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:267559 name: Cuscuta indecora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824903 ! Cuscuta sect. Indecorae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2676692 name: unclassified Dahlia (in: eudicots) namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41562 ! Dahlia [Term] id: NCBITaxon:2683659 name: Chytridiomycota incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4761 ! Chytridiomycota [Term] id: NCBITaxon:2683660 name: Blastocladiomycota incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451459 ! Blastocladiomycota [Term] id: NCBITaxon:2684926 name: unclassified Acidovorax namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:12916 ! Acidovorax [Term] id: NCBITaxon:2684947 name: unclassified Phellinus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40470 ! Phellinus [Term] id: NCBITaxon:2689066 name: unclassified Graphium (in: ascomycete fungi) namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1503932 ! Graphium [Term] id: NCBITaxon:2689091 name: unclassified Acremonium namespace: ncbi_taxonomy alt_id: NCBITaxon:2689090 xref: GC_ID:1 is_a: NCBITaxon:159075 ! Acremonium [Term] id: NCBITaxon:269363 name: Ascochyta medicaginicola var. medicaginicola namespace: ncbi_taxonomy alt_id: NCBITaxon:2040517 synonym: "Phoma medicaginis var. medicaginis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:107450 ! Ascochyta medicaginicola property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:2695822 name: Bipolaris gigantea namespace: ncbi_taxonomy alt_id: NCBITaxon:1937655 synonym: "Drechslera gigantea" RELATED synonym [] synonym: "Helminthosporium giganteum Heald & F.A. Wolf, 1911, nom. illegit." EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:269710 name: Bursaphelenchus cocophilus namespace: ncbi_taxonomy synonym: "red ring nematode" EXACT genbank_common_name [] synonym: "Rhadinaphelenchus cocophilus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:6324 ! Bursaphelenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2697495 name: Spiralia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33317 ! Protostomia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:269767 name: Aphelenchoides besseyi namespace: ncbi_taxonomy synonym: "Aphelenchoides oryzae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:90723 ! Aphelenchoides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2698737 name: Sar namespace: ncbi_taxonomy synonym: "SAR supergroup" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2759 ! Eukaryota property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:270279 name: Laricifomes officinalis namespace: ncbi_taxonomy synonym: "Boletus officinalis" RELATED synonym [] synonym: "Fomitopsis officinalis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2983426 ! Laricifomes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:270280 name: Niveoporofomes spraguei namespace: ncbi_taxonomy synonym: "Fomitopsis spraguei" RELATED synonym [] synonym: "Polyporus spraguei" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2911867 ! Niveoporofomes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2706 name: Citrus namespace: ncbi_taxonomy alt_id: NCBITaxon:170990 alt_id: NCBITaxon:76962 alt_id: NCBITaxon:76965 xref: GC_ID:1 is_a: NCBITaxon:1728959 ! Aurantioideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:27065 name: Theaceae namespace: ncbi_taxonomy synonym: "tea family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41945 ! Ericales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2707335 name: Colletotrichum acutatum species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23136458 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2707338 name: Colletotrichum gloeosporioides species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23136459 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2707339 name: Colletotrichum truncatum species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2707348 name: Colletotrichum graminicola species complex namespace: ncbi_taxonomy alt_id: NCBITaxon:2707347 xref: GC_ID:1 xref: PMID:25083403 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2707350 name: Colletotrichum destructivum species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:25492986 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2707353 name: Colletotrichum dematium species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2707354 name: Colletotrichum orbiculare species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum [Term] id: NCBITaxon:2713052 name: Gonatobotrys namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:72984 ! Ceratostomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2713053 name: Gonatobotrys simplex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2713052 ! Gonatobotrys property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:271835 name: Acarosporina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:56757 ! Stictidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:271836 name: Acarosporina microspora namespace: ncbi_taxonomy synonym: "Schizoxylon microsporum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:271835 ! Acarosporina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2720871 name: Aspergillus subgen. Circumdati namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:28082760 is_a: NCBITaxon:5052 ! Aspergillus property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:2720872 name: Aspergillus subgen. Fumigati namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:28082760 is_a: NCBITaxon:5052 ! Aspergillus property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:2720874 name: Aspergillus subgen. Aspergillus namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:28082760 is_a: NCBITaxon:5052 ! Aspergillus property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:27219 name: Arceuthobium namespace: ncbi_taxonomy synonym: "dwarf mistletoes" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1003255 ! Viscaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2726946 name: Cladosporiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451867 ! Dothideomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2726947 name: Mycosphaerellales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451867 ! Dothideomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:273035 name: Spiroplasma kunkelii CR2-3x namespace: ncbi_taxonomy synonym: "Spiroplasma kunkelii str. CR2-3x" EXACT equivalent_name [] synonym: "Spiroplasma kunkelii strain CR2-3x" EXACT equivalent_name [] xref: GC_ID:4 is_a: NCBITaxon:47834 ! Spiroplasma kunkelii property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:2731341 name: Duplodnaviria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10239 ! Viruses property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2731342 name: Monodnaviria namespace: ncbi_taxonomy synonym: "single-stranded DNA viruses" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:10239 ! Viruses property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2731360 name: Heunggongvirae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2731341 ! Duplodnaviria property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:2731618 name: Uroviricota namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2731360 ! Heunggongvirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2731619 name: Caudoviricetes namespace: ncbi_taxonomy alt_id: NCBITaxon:10662 alt_id: NCBITaxon:10699 alt_id: NCBITaxon:10744 alt_id: NCBITaxon:145370 alt_id: NCBITaxon:28883 synonym: "bacterial and archaeal viruses with head-tail morphology" EXACT genbank_common_name [] synonym: "bacterial virus" RELATED in_part [] synonym: "phages with contractile tails" EXACT common_name [] synonym: "phages with long non-contractile tails" EXACT common_name [] synonym: "phages with short tails" EXACT common_name [] synonym: "prokaryotic virus" RELATED in_part [] synonym: "Styloviridae" EXACT equivalent_name [] synonym: "Tailed phages" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:18555669 is_a: NCBITaxon:2731618 ! Uroviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732004 name: Varidnaviria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10239 ! Viruses property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2732005 name: Bamfordvirae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732004 ! Varidnaviria property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:2732008 name: Preplasmiviricota namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732005 ! Bamfordvirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2732092 name: Shotokuvirae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2731342 ! Monodnaviria property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:2732396 name: Orthornavirae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2559587 ! Riboviria property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:2732397 name: Pararnavirae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2559587 ! Riboviria property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:2732405 name: Duplornaviricota namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732396 ! Orthornavirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2732406 name: Kitrinoviricota namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732396 ! Orthornavirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2732408 name: Pisuviricota namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732396 ! Orthornavirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2732409 name: Artverviricota namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732397 ! Pararnavirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2732416 name: Cressdnaviricota namespace: ncbi_taxonomy synonym: "eukaryotic Rep-encoding ssDNA viruses" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:2732092 ! Shotokuvirae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:2732424 name: Repensiviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732416 ! Cressdnaviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732459 name: Resentoviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732405 ! Duplornaviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732461 name: Alsuviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732406 ! Kitrinoviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732463 name: Tolucaviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732406 ! Kitrinoviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732505 name: Duplopiviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732408 ! Pisuviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732506 name: Pisoniviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732408 ! Pisuviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732507 name: Stelpaviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732408 ! Pisuviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732514 name: Revtraviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732409 ! Artverviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732529 name: Tectiliviricetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732008 ! Preplasmiviricota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2732539 name: Geplafuvirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732424 ! Repensiviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732541 name: Reovirales namespace: ncbi_taxonomy alt_id: NCBITaxon:10880 synonym: "Reoviridae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2732459 ! Resentoviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732543 name: Hepelivirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732461 ! Alsuviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732544 name: Martellivirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732461 ! Alsuviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732548 name: Tolivirales namespace: ncbi_taxonomy alt_id: NCBITaxon:119163 xref: GC_ID:1 is_a: NCBITaxon:2732463 ! Tolucaviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732549 name: Durnavirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732505 ! Duplopiviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732550 name: Patatavirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732507 ! Stelpaviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732553 name: Sobelivirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732506 ! Pisoniviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732559 name: Rowavirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732529 ! Tectiliviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2732890 name: Mayoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732544 ! Martellivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2733245 name: Alphanucleorhabdovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2842408 ! Betarhabdovirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:27334 name: Penicillium expansum namespace: ncbi_taxonomy alt_id: NCBITaxon:1112175 xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27335 name: Verticillium albo-atrum namespace: ncbi_taxonomy synonym: "Acremonium apii" RELATED synonym [] synonym: "Verticillium alboatrum" RELATED synonym [] xref: GC_ID:1 xref: PMID:22174791 is_a: NCBITaxon:1036719 ! Verticillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27337 name: Verticillium dahliae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:22174791 is_a: NCBITaxon:1036719 ! Verticillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27344 name: Puccinia coronata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27345 name: Puccinia hordei namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2734650 name: Piptoporellus baudonii namespace: ncbi_taxonomy synonym: "Laetiporus baudonii (Pat.) Ryvarden, 1991" RELATED synonym [] synonym: "Polyporus baudonii Pat., 1991" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2100475 ! Piptoporellus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27348 name: Puccinia recondita namespace: ncbi_taxonomy alt_id: NCBITaxon:1349990 xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27349 name: Puccinia sorghi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27350 name: Puccinia striiformis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27357 name: Colletotrichum acutatum namespace: ncbi_taxonomy alt_id: NCBITaxon:135490 alt_id: NCBITaxon:442686 alt_id: NCBITaxon:442687 alt_id: NCBITaxon:442688 alt_id: NCBITaxon:442689 alt_id: NCBITaxon:476220 alt_id: NCBITaxon:476221 alt_id: NCBITaxon:476222 alt_id: NCBITaxon:476223 alt_id: NCBITaxon:476224 alt_id: NCBITaxon:476225 alt_id: NCBITaxon:476226 alt_id: NCBITaxon:476227 alt_id: NCBITaxon:476228 alt_id: NCBITaxon:476229 alt_id: NCBITaxon:476230 alt_id: NCBITaxon:476231 alt_id: NCBITaxon:476232 alt_id: NCBITaxon:476233 alt_id: NCBITaxon:476234 alt_id: NCBITaxon:476235 alt_id: NCBITaxon:476236 alt_id: NCBITaxon:476237 alt_id: NCBITaxon:476238 alt_id: NCBITaxon:476257 synonym: "Colletotrichum acutatum f. pineum" RELATED synonym [] synonym: "Colletotrichum acutatum f. pineum (nom. inval.)" EXACT equivalent_name [] synonym: "Glomerella acutata" RELATED synonym [] xref: GC_ID:1 xref: PMID:23136458 is_a: NCBITaxon:2707335 ! Colletotrichum acutatum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27358 name: Colletotrichum coccodes namespace: ncbi_taxonomy synonym: "Chaetomium coccodes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:274471 name: Carangoides malabaricus namespace: ncbi_taxonomy synonym: "Caranx malabaricus" RELATED synonym [] synonym: "Malabar trevally" EXACT genbank_common_name [] synonym: "Scomber malabaricus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:179360 ! Carangoides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2750216 name: unclassified Fusarium oxysporum species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:171631 ! Fusarium oxysporum species complex [Term] id: NCBITaxon:2751833 name: unclassified Fusarium fujikuroi species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex [Term] id: NCBITaxon:2752537 name: Talaromyces sect. Talaromyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5094 ! Talaromyces property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:2759 name: Eukaryota namespace: ncbi_taxonomy synonym: "Eucarya" RELATED synonym [] synonym: "Eucaryotae" RELATED synonym [] synonym: "eucaryotes" EXACT genbank_common_name [] synonym: "Eukarya" RELATED synonym [] synonym: "Eukaryotae" RELATED synonym [] synonym: "eukaryotes" EXACT common_name [] synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 xref: PMID:30257078 is_a: NCBITaxon:131567 ! cellular organisms property_value: has_rank NCBITaxon:superkingdom [Term] id: NCBITaxon:276832 name: Dothiorella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:276838 name: Physoderma maydis namespace: ncbi_taxonomy synonym: "Cladochytrium maydis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:109874 ! Physoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:27770 name: Trichiuridae namespace: ncbi_taxonomy synonym: "cutlassfishes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1489894 ! Scombriformes property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2779495 name: Calonectria cylindrospora species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:57138 ! Calonectria [Term] id: NCBITaxon:2779501 name: Calonectria pteridis species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:57138 ! Calonectria [Term] id: NCBITaxon:2779503 name: Calonectria kyotensis species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:57138 ! Calonectria [Term] id: NCBITaxon:2779609 name: Phytomyxea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2604748 ! Endomyxa property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2785011 name: Autobranchia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6544 ! Bivalvia property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:2787823 name: unclassified entries namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1 ! root [Term] id: NCBITaxon:2788865 name: unclassified Reovirales namespace: ncbi_taxonomy alt_id: NCBITaxon:36446 synonym: "unclassified Reoviridae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2732541 ! Reovirales [Term] id: NCBITaxon:279129 name: Phragmidium mucronatum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:190610 ! Phragmidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2792465 name: Zaghouaniaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:367869 synonym: "Mikronegeriaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2792468 name: Gymnosporangiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:279361 name: Sclerotinia spermophila namespace: ncbi_taxonomy synonym: "Botrytis anthophila" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5179 ! Sclerotinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2793945 name: Drepanopezizaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5178 ! Helotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2794007 name: Chaetomellales namespace: ncbi_taxonomy alt_id: NCBITaxon:2793943 synonym: "Marthamycetales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:147548 ! Leotiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:2800373 name: Priestia namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:186817 ! Bacillaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:280323 name: Libertella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189359 ! Xylariales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:280324 name: Libertella blepharis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:280323 ! Libertella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:28092 name: Robbsia andropogonis namespace: ncbi_taxonomy alt_id: NCBITaxon:86194 synonym: "Aplanobacter stizolobii" RELATED synonym [] synonym: "Bacterium andropogoni" RELATED synonym [] synonym: "Bacterium woodsii" RELATED synonym [] synonym: "Burkholderia andropogonis" RELATED synonym [] synonym: "Paraburkholderia andropogonis" RELATED synonym [] synonym: "Pseudomonas andropogonis" RELATED synonym [] synonym: "Pseudomonas stizolobii" RELATED synonym [] synonym: "Pseudomonas woodsii" RELATED synonym [] xref: GC_ID:11 xref: PMID:10939664 xref: PMID:11211258 xref: PMID:25566316 xref: PMID:28190154 is_a: NCBITaxon:2038280 ! Robbsia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:28094 name: Trinickia caryophylli namespace: ncbi_taxonomy synonym: "Burkholderia caryophylli" RELATED synonym [] synonym: "Paraburkholderia caryophylli" RELATED synonym [] synonym: "Phytomonas caryophylli" RELATED synonym [] synonym: "Pseudomonas caryophylli" RELATED synonym [] xref: GC_ID:11 xref: PMID:1283774 xref: PMID:25566316 is_a: NCBITaxon:2571160 ! Trinickia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:28095 name: Burkholderia gladioli namespace: ncbi_taxonomy alt_id: NCBITaxon:40517 alt_id: NCBITaxon:86178 synonym: "Burkholderia cocovenenans" RELATED synonym [] synonym: "Pseudomonas antimicrobica" RELATED synonym [] synonym: "Pseudomonas cocovenenans" RELATED synonym [] synonym: "Pseudomonas gladioli" RELATED synonym [] xref: GC_ID:11 xref: PMID:10028245 xref: PMID:10939664 xref: PMID:11155989 xref: PMID:1283774 xref: PMID:16627650 xref: PMID:8590691 is_a: NCBITaxon:32008 ! Burkholderia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2810418 name: unclassified Alternaria sect. Ulocladium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119947 ! Alternaria sect. Ulocladium [Term] id: NCBITaxon:281124 name: Corynesporascaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:92860 ! Pleosporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:281250 name: Schizothyriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2726947 ! Mycosphaerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:28211 name: Alphaproteobacteria namespace: ncbi_taxonomy synonym: "a-proteobacteria" RELATED blast_name [] synonym: "alpha proteobacteria" RELATED synonym [] synonym: "alpha subdivision" RELATED synonym [] synonym: "alpha subgroup" RELATED synonym [] synonym: "Alphabacteria" RELATED synonym [] synonym: "Proteobacteria alpha subdivision" RELATED synonym [] synonym: "Purple bacteria, alpha subdivision" RELATED synonym [] xref: GC_ID:11 xref: PMID:11541974 xref: PMID:11837318 xref: PMID:16166687 xref: PMID:16403855 xref: PMID:19060069 is_a: NCBITaxon:1224 ! Proteobacteria property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:2821352 name: Conifers I namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:19761858 is_a: NCBITaxon:3313 ! Pinidae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:28216 name: Betaproteobacteria namespace: ncbi_taxonomy synonym: "b-proteobacteria" RELATED blast_name [] synonym: "beta proteobacteria" RELATED synonym [] synonym: "beta subdivision" RELATED synonym [] synonym: "beta subgroup" RELATED synonym [] synonym: "Proteobacteria beta subdivision" RELATED synonym [] synonym: "Purple bacteria, beta subdivision" RELATED synonym [] xref: GC_ID:11 xref: PMID:16403855 xref: PMID:28581923 is_a: NCBITaxon:1224 ! Proteobacteria property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:283358 name: Alternaria cucumerina namespace: ncbi_taxonomy synonym: "Macrosporium cucumerinum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499262 ! Alternaria sect. Porri property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:283360 name: Alternaria sonchi namespace: ncbi_taxonomy alt_id: NCBITaxon:2776182 xref: GC_ID:1 is_a: NCBITaxon:2499265 ! Alternaria sect. Sonchi property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:283363 name: Alternaria euphorbiicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2499269 ! Alternaria sect. Euphorbiicola property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:28347 name: Apple stem grooving virus namespace: ncbi_taxonomy synonym: "apple stem grooving virus ASGV" EXACT equivalent_name [] synonym: "ASGV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12174 ! Capillovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:28351 name: Strawberry latent ringspot virus namespace: ncbi_taxonomy synonym: "Strawberry latent ringspot nepovirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:3052753 ! Stralarivirus fragariae [Term] id: NCBITaxon:28353 name: Peanut stripe virus namespace: ncbi_taxonomy synonym: "Bean common mosaic virus strain peanut stripe" EXACT equivalent_name [] synonym: "peanut stripe virus PStV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12196 ! Bean common mosaic virus [Term] id: NCBITaxon:2835904 name: Ajugoideae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:33419433 is_a: NCBITaxon:4136 ! Lamiaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:2835920 name: Clerodendreae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:33419433 is_a: NCBITaxon:2835904 ! Ajugoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:2836337 name: Menthinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:216718 ! Mentheae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:28375 name: Soil-borne wheat mosaic virus namespace: ncbi_taxonomy alt_id: NCBITaxon:49965 xref: GC_ID:1 is_a: NCBITaxon:12291 ! Furovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:284134 name: Sarocladium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2502719 ! Sarocladiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:284135 name: Sarocladium oryzae namespace: ncbi_taxonomy synonym: "Acrocylindrium oryzae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:284134 ! Sarocladium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2841720 name: Asterinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:886583 ! Australasian lineages property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:2841736 name: Symphiotrichinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:877976 ! North American clade property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:2842408 name: Betarhabdovirinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:11270 ! Rhabdoviridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:2843479 name: Acarallexivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:140568 ! Allexivirus property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:28447 name: Clavibacter michiganensis namespace: ncbi_taxonomy synonym: "Aplanobacter michiganense" RELATED synonym [] synonym: "Clavibacter michiganense" RELATED synonym [] synonym: "Clavibacter michiganensis corrig. (Smith 1910) Davis et al. 1984" RELATED synonym [] synonym: "Corynebacterium michiganense (Smith 1910) Jensen 1934 (Approved Lists 1980)" RELATED synonym [] synonym: "Mycobacterium flavum subsp. michiganense" RELATED synonym [] synonym: "Phytomonas michiganensis" RELATED synonym [] synonym: "Pseudomonas michiganensis" RELATED synonym [] xref: GC_ID:11 xref: PMID:30533634 is_a: NCBITaxon:1573 ! Clavibacter property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:284609 name: Strigula namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:714593 ! Strigulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:28548 name: Sclerotinia trifoliorum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5179 ! Sclerotinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:28556 name: Pleosporaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:117568 synonym: "Pyrenophoraceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:715340 ! Pleosporineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:28557 name: Pleospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:28568 name: Trichocomaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:34380 synonym: "Eurotiaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5042 ! Eurotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:28572 name: Talaromyces funiculosus namespace: ncbi_taxonomy alt_id: NCBITaxon:1390067 alt_id: NCBITaxon:1541422 synonym: "Penicillium funiculosum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2752537 ! Talaromyces sect. Talaromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:285810 name: Pyrenochaeta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:221670 ! Cucurbitariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:286 name: Pseudomonas namespace: ncbi_taxonomy alt_id: NCBITaxon:212745 synonym: "\"Chlorobacterium\" Guillebeau 1890, nom. rejic. Opin. 6 (not \"Chlorobacterium\" Lauterborn 1916)" RELATED synonym [] synonym: "Liquidomonas" RELATED synonym [] synonym: "Loefflerella" RELATED synonym [] synonym: "RNA similarity group I" RELATED synonym [] xref: GC_ID:11 xref: PMID:10758879 xref: PMID:10939664 xref: PMID:15950132 xref: PMID:18048745 xref: PMID:23918787 xref: PMID:7727274 xref: PMID:9103607 is_a: NCBITaxon:135621 ! Pseudomonadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:286113 name: Synchytriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2231171 ! Synchytriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:286114 name: Synchytrium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:286113 ! Synchytriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:286115 name: Synchytrium endobioticum namespace: ncbi_taxonomy synonym: "Chrysophlyctis endobiotica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:286114 ! Synchytrium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:286616 name: Schizothyrium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:281250 ! Schizothyriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:286617 name: Schizothyrium pomi namespace: ncbi_taxonomy alt_id: NCBITaxon:286624 synonym: "Labrella pomi" RELATED synonym [] synonym: "Zygophiala jamaicensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:286616 ! Schizothyrium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:286660 name: Peltaster namespace: ncbi_taxonomy synonym: "Peltaster" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:286661 name: Peltaster fructicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:286660 ! Peltaster property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2867405 name: Blumeria hordei namespace: ncbi_taxonomy alt_id: NCBITaxon:5123 alt_id: NCBITaxon:62688 synonym: "Blumeria graminis f. sp. hordei" EXACT equivalent_name [] synonym: "Erysiphe graminis (subsp. hordei)" EXACT equivalent_name [] synonym: "Erysiphe graminis f. sp. hordei" EXACT equivalent_name [] synonym: "grass mildew" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:34372 ! Blumeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:287 name: Pseudomonas aeruginosa namespace: ncbi_taxonomy alt_id: NCBITaxon:1224290 alt_id: NCBITaxon:1437768 alt_id: NCBITaxon:1437769 alt_id: NCBITaxon:1437770 alt_id: NCBITaxon:1508364 alt_id: NCBITaxon:1607811 alt_id: NCBITaxon:1607813 alt_id: NCBITaxon:1683559 alt_id: NCBITaxon:1683561 alt_id: NCBITaxon:1851858 alt_id: NCBITaxon:1851865 alt_id: NCBITaxon:1860124 alt_id: NCBITaxon:665948 alt_id: NCBITaxon:912077 alt_id: NCBITaxon:931955 alt_id: NCBITaxon:931956 alt_id: NCBITaxon:931957 alt_id: NCBITaxon:931958 alt_id: NCBITaxon:932477 synonym: "Bacillus aeruginosus" RELATED synonym [] synonym: "Bacillus pyocyaneus" RELATED synonym [] synonym: "Bacterium aeruginosum" RELATED synonym [] synonym: "Bacterium pyocyaneum" RELATED synonym [] synonym: "Micrococcus pyocyaneus" RELATED synonym [] synonym: "probable synonym or variety: \"Pseudomonas polycolor\" Clara 1930" RELATED synonym [] synonym: "Pseudomonas polycolor" RELATED synonym [] synonym: "Pseudomonas pyocyanea" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:136841 ! Pseudomonas aeruginosa group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:288490 name: Rotylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211162 ! Rotylenchulinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:288492 name: Meloidogyne ardenensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:288494 name: Tylenchorhynchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211154 ! Telotylenchidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:288498 name: Telotylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211154 ! Telotylenchidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:289323 name: Rigidoporus ulmarius namespace: ncbi_taxonomy synonym: "Boletus ulmarius" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:81053 ! Rigidoporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:289615 name: Pythium scleroteichum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2897311 name: Fulvia namespace: ncbi_taxonomy synonym: "Fulvia" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:28983 name: Sclerotiniaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:117566 xref: GC_ID:1 is_a: NCBITaxon:5178 ! Helotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:289951 name: Physarum cinereum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5790 ! Physarum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29000 name: Pucciniomycotina namespace: ncbi_taxonomy synonym: "Urediniomycetes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5204 ! Basidiomycota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:29001 name: Alternaria brassicicola namespace: ncbi_taxonomy alt_id: NCBITaxon:1245772 synonym: "Helminthosporium brassicicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499238 ! Alternaria sect. Brassicicola property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29002 name: Cercospora namespace: ncbi_taxonomy alt_id: NCBITaxon:2081260 xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:29003 name: Cercospora nicotianae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:290154 name: Bactericera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:38124 ! Triozidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:290155 name: Bactericera cockerelli namespace: ncbi_taxonomy alt_id: NCBITaxon:38126 synonym: "Bactericera (Paratrioza) cockerelli" RELATED synonym [] synonym: "Paratrioza cockerelli" RELATED synonym [] synonym: "potato psyllid" EXACT common_name [] synonym: "potato/tomato psyllid" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:290154 ! Bactericera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:290576 name: Colletotrichum lindemuthianum namespace: ncbi_taxonomy alt_id: NCBITaxon:5458 synonym: "Gloeosporium lindemuthianum" RELATED synonym [] synonym: "Glomerella lindemuthiana Shear, 1913" RELATED synonym [] synonym: "Glomerella lindermuthiana" RELATED synonym [] xref: GC_ID:1 xref: PMID:16457349 xref: PMID:23449079 is_a: NCBITaxon:2707354 ! Colletotrichum orbiculare species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:290582 name: Puccinia dioicae namespace: ncbi_taxonomy alt_id: NCBITaxon:462772 synonym: "Dicaeoma dioicae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2907087 name: Leptodontidiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5178 ! Helotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:290882 name: Massarinaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:420482 xref: GC_ID:1 is_a: NCBITaxon:1255046 ! Massarineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:291027 name: unclassified Begomovirus namespace: ncbi_taxonomy synonym: "unclassified begomoviruses" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus [Term] id: NCBITaxon:291058 name: Diaporthe perseae namespace: ncbi_taxonomy synonym: "Phomopsis perseae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2911867 name: Niveoporofomes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1769247 ! Fomitopsidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:291622 name: Pseudoperonospora cannabina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:143452 ! Pseudoperonospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:291631 name: Phacidiopycnis namespace: ncbi_taxonomy synonym: "mitosporic Rhytismataceae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:66516 ! Phacidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2916678 name: CUG-Ser1 clade namespace: ncbi_taxonomy synonym: "CTG clade" EXACT equivalent_name [] xref: GC_ID:12 xref: PMID:29760453 xref: PMID:33607033 is_a: NCBITaxon:4892 ! Saccharomycetales property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:2918219 name: Pyrrhulomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40562 ! Strophariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2918375 name: unclassified Phialophora namespace: ncbi_taxonomy alt_id: NCBITaxon:2688807 synonym: "unclassified Phialophora (in: Eurotiomycetes)" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5600 ! Phialophora [Term] id: NCBITaxon:292 name: Burkholderia cepacia namespace: ncbi_taxonomy alt_id: NCBITaxon:146787 alt_id: NCBITaxon:146800 alt_id: NCBITaxon:1628202 alt_id: NCBITaxon:1637870 alt_id: NCBITaxon:1637872 alt_id: NCBITaxon:1637873 alt_id: NCBITaxon:1637881 alt_id: NCBITaxon:1637902 alt_id: NCBITaxon:1683533 synonym: "Burkholderia cepacia genomovar I" EXACT equivalent_name [] synonym: "Pseudomonas cepacia" RELATED synonym [] synonym: "Pseudomonas kingii" RELATED synonym [] synonym: "Pseudomonas multivorans" RELATED synonym [] xref: GC_ID:11 xref: PMID:1283774 xref: PMID:5963505 xref: PMID:7526797 is_a: NCBITaxon:87882 ! Burkholderia cepacia complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:292919 name: Cuscuteae namespace: ncbi_taxonomy alt_id: NCBITaxon:4127 synonym: "Cuscutoideae" RELATED synonym [] synonym: "dodders" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4118 ! Convolvulaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:293573 name: Merlinius brevidens namespace: ncbi_taxonomy alt_id: NCBITaxon:2583955 synonym: "Geocenamus brevidens" RELATED synonym [] synonym: "Merlinius sp. P36" RELATED synonym [] synonym: "Tylenchorhynchus brevidens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:211155 ! Merlinius property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:293577 name: Bitylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211154 ! Telotylenchidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:293578 name: Bitylenchus dubius namespace: ncbi_taxonomy alt_id: NCBITaxon:364559 synonym: "Tylenchorhynchus dubius" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:293577 ! Bitylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:293581 name: Helicotylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211161 ! Hoplolaiminae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:293583 name: Helicotylenchus pseudorobustus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:293581 ! Helicotylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:293588 name: Pratylenchus pratensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:293594 name: Hemicriconemoides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211169 ! Criconematinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:293596 name: Hemicycliophoridae namespace: ncbi_taxonomy alt_id: NCBITaxon:859259 synonym: "Caloosiidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:211167 ! Criconematoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:293600 name: Paratylenchinae namespace: ncbi_taxonomy synonym: "Paratylenchidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:211172 ! Tylenchulidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:293601 name: Paratylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:293600 ! Paratylenchinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:294 name: Pseudomonas fluorescens namespace: ncbi_taxonomy alt_id: NCBITaxon:1041111 alt_id: NCBITaxon:1092647 alt_id: NCBITaxon:1622272 alt_id: NCBITaxon:1851859 alt_id: NCBITaxon:1851860 alt_id: NCBITaxon:1851862 alt_id: NCBITaxon:258710 alt_id: NCBITaxon:397415 alt_id: NCBITaxon:397420 alt_id: NCBITaxon:450638 alt_id: NCBITaxon:577534 alt_id: NCBITaxon:930403 alt_id: NCBITaxon:936021 synonym: "Bacillus fluorescens" RELATED synonym [] synonym: "Bacillus fluorescens liquefaciens" RELATED synonym [] synonym: "Bacterium fluorescen" RELATED synonym [] synonym: "Liquidomonas fluorescens" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:136843 ! Pseudomonas fluorescens group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2942676 name: Kirjokansivirales namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2731619 ! Caudoviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:29438 name: Pseudomonas savastanoi namespace: ncbi_taxonomy synonym: "Pseudomonas syringae (PV. SAVASTANOI)" RELATED synonym [] synonym: "Pseudomonas syringae pv. savastanoi" RELATED synonym [] synonym: "Pseudomonas syringae subsp. savastanoi" RELATED synonym [] xref: GC_ID:11 xref: PMID:10319466 xref: PMID:29270162 is_a: NCBITaxon:251698 ! Pseudomonas syringae group genomosp. 2 property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29447 name: Xanthomonas albilineans namespace: ncbi_taxonomy synonym: "Agrobacterium albilineans" RELATED synonym [] synonym: "Bacterium albilineans" RELATED synonym [] synonym: "Phytomonas albilineans" RELATED synonym [] synonym: "Pseudomonas albilineans" RELATED synonym [] synonym: "Xanthomonas albilineans var. paspali" RELATED synonym [] xref: GC_ID:11 xref: PMID:2275852 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2946180 name: Haloferuviridae namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2942676 ! Kirjokansivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2946186 name: Sedoreoviridae namespace: ncbi_taxonomy alt_id: NCBITaxon:689832 synonym: "Sedoreovirinae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2732541 ! Reovirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2946187 name: Spinareoviridae namespace: ncbi_taxonomy alt_id: NCBITaxon:689831 synonym: "Spinareovirinae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2732541 ! Reovirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:294621 name: Puccinia tanaceti namespace: ncbi_taxonomy synonym: "Puccinia absinthii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2948915 name: Stralarivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675072 ! Secoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:295094 name: Albugo ipomoeae-panduratae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:65356 ! Albugo property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2953674 name: Alphanucleorhabdovirus oryzae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2733245 ! Alphanucleorhabdovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2954887 name: Fusarium redolens species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5506 ! Fusarium [Term] id: NCBITaxon:2955987 name: Idaeovirus rubi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39760 ! Idaeovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2960393 name: unclassified Haloferuviridae namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2946180 ! Haloferuviridae [Term] id: NCBITaxon:297020 name: Juxtiphoma eupyrena namespace: ncbi_taxonomy alt_id: NCBITaxon:319166 synonym: "Phoma eupyrena" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2078541 ! Juxtiphoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2972384 name: Diaporthe eres species complex namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe [Term] id: NCBITaxon:2975570 name: Pseudospongipellis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2028206 ! Cerrenaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:29780 name: Mangifera indica namespace: ncbi_taxonomy synonym: "mango" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:23461 ! Mangifera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:298 name: Pseudomonas marginalis namespace: ncbi_taxonomy alt_id: NCBITaxon:307251 synonym: "Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)" RELATED synonym [] synonym: "Pseudomonas panacis" RELATED synonym [] xref: GC_ID:11 xref: PMID:35507398 is_a: NCBITaxon:136843 ! Pseudomonas fluorescens group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2982303 name: Tricholomatineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5338 ! Agaricales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:2982305 name: Agaricineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5338 ! Agaricales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:2982316 name: Marasmiineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5338 ! Agaricales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:2983306 name: Piptoporellaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2983313 name: Postiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2983425 name: Laricifomitaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2983426 name: Laricifomes namespace: ncbi_taxonomy synonym: "Laricifomes Kotl. & Pouzar, 1957" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2983425 ! Laricifomitaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:2983429 name: Phaeolaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:2983527 name: Pleurotineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5338 ! Agaricales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:298378 name: Fusarium incarnatum namespace: ncbi_taxonomy alt_id: NCBITaxon:100904 alt_id: NCBITaxon:1501449 alt_id: NCBITaxon:1501450 alt_id: NCBITaxon:2109338 alt_id: NCBITaxon:451900 alt_id: NCBITaxon:679404 alt_id: NCBITaxon:679405 alt_id: NCBITaxon:875413 synonym: "Fusarium pallidoroseum" RELATED synonym [] synonym: "Fusarium semitectum" RELATED synonym [] synonym: "Fusisporium incarnatum" RELATED synonym [] xref: GC_ID:1 xref: PMID:32214500 is_a: NCBITaxon:450425 ! Fusarium incarnatum-equiseti species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29849 name: Gaeumannomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:81093 ! Magnaporthaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:29850 name: Gaeumannomyces graminis namespace: ncbi_taxonomy alt_id: NCBITaxon:36780 synonym: "Gaeumannomyces graminis var. graminis" RELATED synonym [] synonym: "Ophiobolus graminis" RELATED synonym [] synonym: "Ophiochaeta graminis" RELATED synonym [] synonym: "Rhaphidophora graminis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:29849 ! Gaeumannomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:2985477 name: Schizophyllineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5338 ! Agaricales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:29855 name: Nectria cinnabarina namespace: ncbi_taxonomy synonym: "Sphaeria cinnabarina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5133 ! Nectria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29856 name: Clonostachys rosea namespace: ncbi_taxonomy alt_id: NCBITaxon:110566 alt_id: NCBITaxon:2741099 alt_id: NCBITaxon:2741106 alt_id: NCBITaxon:29854 alt_id: NCBITaxon:29858 synonym: "Bionectria aureofulva" RELATED synonym [] synonym: "Bionectria aureofulva (Cooke & Ellis) Schroers & Samuels, 1997" RELATED synonym [] synonym: "Bionectria ochroleuca" RELATED synonym [] synonym: "Gliocladium roseum" RELATED synonym [] synonym: "Nectria aureofulva" RELATED synonym [] synonym: "Nectria congesta" RELATED synonym [] synonym: "Nectria gliocladioides" RELATED synonym [] synonym: "Nectria ochroleuca (Schwein.) Berk., 1875" RELATED synonym [] synonym: "Nectria phyllostachydis" RELATED synonym [] synonym: "Penicillium roseum" RELATED synonym [] synonym: "Sphaeria ochroleuca" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:110564 ! Clonostachys property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29876 name: Tubercularia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162454 ! Hypocreales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:29877 name: Tubercularia vulgaris namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29876 ! Tubercularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29884 name: Ganoderma applanatum namespace: ncbi_taxonomy alt_id: NCBITaxon:27340 synonym: "Boletus applanatus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29907 name: Sporothrix namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5152 ! Ophiostomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:29911 name: Alternaria brassicae namespace: ncbi_taxonomy synonym: "Macrosporium brassicae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29916 name: Fusarium sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:1755426 alt_id: NCBITaxon:2040670 alt_id: NCBITaxon:2904684 synonym: "Albonectria sp." EXACT equivalent_name [] synonym: "Bisifusarium sp." EXACT equivalent_name [] synonym: "Cyanonectria sp." EXACT equivalent_name [] synonym: "Gibberella sp." EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2593666 ! unclassified Fusarium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29917 name: Cladosporium cladosporioides namespace: ncbi_taxonomy alt_id: NCBITaxon:1420880 alt_id: NCBITaxon:1701678 alt_id: NCBITaxon:1701679 alt_id: NCBITaxon:2081379 alt_id: NCBITaxon:361750 alt_id: NCBITaxon:857002 synonym: "Hormodendron cladosporioides" RELATED synonym [] synonym: "Hormodendrum cladosporioides" RELATED synonym [] synonym: "Penicillium cladosporioides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5498 ! Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29918 name: Cladosporium herbarum namespace: ncbi_taxonomy alt_id: NCBITaxon:33207 alt_id: NCBITaxon:470167 alt_id: NCBITaxon:470168 alt_id: NCBITaxon:93035 synonym: "Byssus herbarum" RELATED synonym [] synonym: "Davidiella tassiana" RELATED synonym [] synonym: "Dematium herbarum" RELATED synonym [] synonym: "Dematium vulgare" EXACT equivalent_name [] synonym: "Dematium vulgare (nom. illeg.)" EXACT equivalent_name [] synonym: "Mycosphaerella tassiana" RELATED synonym [] synonym: "Mycosphaerella tulasnei" RELATED synonym [] synonym: "Sphaerella tassiana" RELATED synonym [] synonym: "Sphaerella tulasnei" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5498 ! Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29919 name: Cladosporium oxysporum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5498 ! Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29920 name: Phytophthora cactorum namespace: ncbi_taxonomy alt_id: NCBITaxon:266094 alt_id: NCBITaxon:482634 alt_id: NCBITaxon:482635 alt_id: NCBITaxon:482638 alt_id: NCBITaxon:482653 alt_id: NCBITaxon:482656 alt_id: NCBITaxon:482657 xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:29922 name: Mucor mucedo namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4830 ! Mucor property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:299385 name: Wheat yellow head virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:327263 ! unclassified Tenuivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:299504 name: Phlebia sp. olrim964 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2645834 ! unclassified Phlebia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:299516 name: Ophiostoma sp. olrim972 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2614596 ! unclassified Ophiostoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:30073 name: Ephemeroptera namespace: ncbi_taxonomy synonym: "mayflies" EXACT genbank_common_name [] synonym: "mayflies" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:33339 ! Palaeoptera property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:30080 name: Diaspididae namespace: ncbi_taxonomy synonym: "armored scale insects" EXACT common_name [] synonym: "armored scales" EXACT genbank_common_name [] synonym: "Diaspidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33381 ! Coccoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:301 name: Pseudomonas oleovorans namespace: ncbi_taxonomy alt_id: NCBITaxon:1437760 alt_id: NCBITaxon:1472039 alt_id: NCBITaxon:32041 alt_id: NCBITaxon:330 synonym: "Pseudomonas pseudoalcaligenes" RELATED synonym [] xref: GC_ID:11 xref: PMID:16560407 xref: PMID:19936829 is_a: NCBITaxon:1232139 ! Pseudomonas oleovorans/pseudoalcaligenes group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:30102 name: Cicadellidae namespace: ncbi_taxonomy synonym: "Jassidae" RELATED synonym [] synonym: "leafhoppers" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:33368 ! Membracoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:301097 name: Capnodium sp. olrim506 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2627123 ! unclassified Capnodium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:301117 name: Hypoxylon serpens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:42308 ! Hypoxylon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:301153 name: Hypocreales sp. olrim199 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:85996 ! unclassified Hypocreales property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:301394 name: Chalara sp. olrim396 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2628266 ! unclassified Chalara property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:301414 name: Postia tephroleuca namespace: ncbi_taxonomy alt_id: NCBITaxon:157707 synonym: "Oligoporus tephroleucus" RELATED synonym [] synonym: "Polyporus tephroleucus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:83235 ! Postia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:301713 name: Plenodomus lindquistii namespace: ncbi_taxonomy synonym: "Leptosphaeria lindquistii" RELATED synonym [] synonym: "Phoma macdonaldii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:118259 ! Plenodomus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:30190 name: Pseudococcidae namespace: ncbi_taxonomy synonym: "mealybugs" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:33381 ! Coccoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:302062 name: Pemphredonini namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:253723 ! Pemphredoninae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:30262 name: Thysanoptera namespace: ncbi_taxonomy synonym: "thrips" EXACT genbank_common_name [] synonym: "thrips" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:33342 ! Paraneoptera property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:302913 name: Elsinoe ampelina namespace: ncbi_taxonomy alt_id: NCBITaxon:1077431 synonym: "Gloeosporium ampelophagum" RELATED synonym [] synonym: "Manginia ampelina" RELATED synonym [] synonym: "Ramularia ampelophaga" RELATED synonym [] synonym: "Sphaceloma ampelinum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40996 ! Elsinoe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:303181 name: Exaceae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:12927134 is_a: NCBITaxon:21472 ! Gentianaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:303182 name: Chironieae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:15288069 is_a: NCBITaxon:21472 ! Gentianaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:3041 name: Chlorophyta namespace: ncbi_taxonomy synonym: "algae" RELATED in_part [] synonym: "Chlorophycota" RELATED synonym [] synonym: "Chlorophyta sensu Bremer 1985" RELATED synonym [] synonym: "green algae" EXACT genbank_common_name [] synonym: "green algae" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 is_a: NCBITaxon:33090 ! Viridiplantae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:3042590 name: 16SrI (Aster yellows group) namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:33926 ! Candidatus Phytoplasma property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:304637 name: Trichoderma cf. viride D namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5543 ! Trichoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047360 name: Tymovirus latandigenum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12148 ! Tymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047362 name: Comovirus andesense namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12258 ! Comovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047374 name: Nepovirus arabis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047379 name: Nepovirus italiaense namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047676 name: Luteovirus phaseoli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12036 ! Luteovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047677 name: Comovirus siliquae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12258 ! Comovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047678 name: Comovirus rugomusivum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12258 ! Comovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047699 name: Comovirus viciae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12258 ! Comovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047726 name: Caulimovirus incidianthi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10639 ! Caulimovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047728 name: Alphacarmovirus dianthi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1911599 ! Alphacarmovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047729 name: Dianthovirus dianthi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12266 ! Dianthovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047735 name: Nepovirus manihotis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047736 name: Cavemovirus venamanihotis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186533 ! Cavemovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047738 name: Caulimovirus tessellobrassicae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10639 ! Caulimovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047741 name: Nepovirus avii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047742 name: Cheravirus avii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:310684 ! Cheravirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047773 name: Comovirus severum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12258 ! Comovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047789 name: Caulimovirus tessellodahliae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10639 ! Caulimovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3047852 name: Nepovirus foliumflabelli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048226 name: Marafivirus avenae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12051 ! Marafivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048245 name: Tymovirus passiflorae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12148 ! Tymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048282 name: Nepovirus solani namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048290 name: Comovirus raphani namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12258 ! Comovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048292 name: Nepovirus rubi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048322 name: Luteovirus glycinis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12036 ! Luteovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048370 name: Nepovirus nicotianae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048372 name: Nepovirus nigranuli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048374 name: Tombusvirus lycopersici namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12141 ! Tombusvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048377 name: Nepovirus lycopersici namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12270 ! Nepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3048437 name: Betacarmovirus brassicae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1911600 ! Betacarmovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:305 name: Ralstonia solanacearum namespace: ncbi_taxonomy synonym: "Bacillus solanacearum" RELATED synonym [] synonym: "Burkholderia solanacearum" RELATED synonym [] synonym: "Pseudomonas solanacearum" RELATED synonym [] xref: GC_ID:11 xref: PMID:11594628 xref: PMID:1283774 xref: PMID:24944341 xref: PMID:8573483 xref: PMID:8657018 is_a: NCBITaxon:48736 ! Ralstonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3051137 name: Paracidovorax namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:80864 ! Comamonadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3052576 name: Orthotospovirus impatiensnecromaculae namespace: ncbi_taxonomy alt_id: NCBITaxon:1933294 synonym: "Impatiens necrotic spot orthotospovirus" EXACT equivalent_name [] synonym: "Impatiens necrotic spot tospovirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2560196 ! Orthotospovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3052577 name: Orthotospovirus iridimaculaflavi namespace: ncbi_taxonomy alt_id: NCBITaxon:1933295 synonym: "Iris yellow spot orthotospovirus" EXACT equivalent_name [] synonym: "Iris yellow spot tospovirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2560196 ! Orthotospovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3052753 name: Stralarivirus fragariae namespace: ncbi_taxonomy alt_id: NCBITaxon:2956472 synonym: "Stralarivirus SLRSV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2948915 ! Stralarivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3072477 name: Agroathelia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:721957 ! Amylocorticiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:31013 name: Bagridae namespace: ncbi_taxonomy alt_id: NCBITaxon:30999 synonym: "bagrid catfishes" EXACT genbank_common_name [] synonym: "Olyridae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1489793 ! Siluroidei property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:310684 name: Cheravirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675072 ! Secoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:31089 name: Osteoglossomorpha namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1489343 ! Osteoglossocephala property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:31092 name: Mormyridae namespace: ncbi_taxonomy synonym: "elephantfishes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:41712 ! Osteoglossiformes property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:311473 name: unclassified Saccharomycetales namespace: ncbi_taxonomy alt_id: NCBITaxon:2689088 synonym: "unclassified Candida (in: Saccharomycetales)" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4892 ! Saccharomycetales [Term] id: NCBITaxon:31242 name: Globodera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33286 ! Heteroderinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:31243 name: Globodera rostochiensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:31242 ! Globodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:312642 name: Criconema namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211169 ! Criconematinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:312687 name: Sphaerularioidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33283 ! Tylenchomorpha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:312701 name: Hoplolaimus columbus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211159 ! Hoplolaimus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:313686 name: Hemicycliophora namespace: ncbi_taxonomy alt_id: NCBITaxon:293598 synonym: "Loofia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:293596 ! Hemicycliophoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:313688 name: Criconemoides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:619225 ! Macroposthoniinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:313692 name: Tylenchulus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211173 ! Tylenchulinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:313693 name: Tylenchulus semipenetrans namespace: ncbi_taxonomy synonym: "citrus nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:313692 ! Tylenchulus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:313709 name: Criconema mutabile namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:312642 ! Criconema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:313711 name: Hemicriconemoides strictathecatus namespace: ncbi_taxonomy alt_id: NCBITaxon:664663 alt_id: NCBITaxon:664664 synonym: "Hemicriconemoides mangiferae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:293594 ! Hemicriconemoides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:313720 name: Hemicycliophora thienemanni namespace: ncbi_taxonomy alt_id: NCBITaxon:293599 synonym: "Loofia thienemanni" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:313686 ! Hemicycliophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:314146 name: Euarchontoglires namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:11214319 xref: PMID:12082125 xref: PMID:12878460 xref: PMID:15522813 is_a: NCBITaxon:1437010 ! Boreoeutheria property_value: has_rank NCBITaxon:superorder [Term] id: NCBITaxon:314147 name: Glires namespace: ncbi_taxonomy synonym: "Rodents and rabbits" EXACT genbank_common_name [] xref: GC_ID:1 xref: PMID:11214319 xref: PMID:12082125 xref: PMID:15522813 is_a: NCBITaxon:314146 ! Euarchontoglires property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:314565 name: Xanthomonas campestris pv. campestris str. 8004 namespace: ncbi_taxonomy synonym: "Xanthomonas campestris pv. campestris 8004" EXACT equivalent_name [] synonym: "Xanthomonas campestris pv. campestris strain 8004" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:340 ! Xanthomonas campestris pv. campestris property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:315429 name: Meloidogynidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:31600 name: Indian cassava mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:31602 name: Bean calico mosaic virus namespace: ncbi_taxonomy alt_id: NCBITaxon:31772 synonym: "BCaMV" BROAD acronym [] synonym: "Bean calico mosaic geminivirus" EXACT equivalent_name [] synonym: "Phaseolus vulgaris calico mosaic virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:317 name: Pseudomonas syringae namespace: ncbi_taxonomy alt_id: NCBITaxon:936736 synonym: "Pseudomonas syringae subsp. syringae" RELATED synonym [] xref: GC_ID:11 xref: PMID:10319466 xref: PMID:10552044 xref: PMID:1805313 is_a: NCBITaxon:251695 ! Pseudomonas syringae group genomosp. 1 property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:31713 name: Lettuce infectious yellows virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:67753 ! Crinivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:31721 name: Beet necrotic yellow vein virus namespace: ncbi_taxonomy alt_id: NCBITaxon:12255 alt_id: NCBITaxon:31774 synonym: "Beet necrotic yellow vein mosaic virus" EXACT equivalent_name [] synonym: "beet necrotic yellow vein virus BNYVV" EXACT equivalent_name [] synonym: "BYNVV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:143901 ! Benyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:31732 name: Passion fruit woodiness virus namespace: ncbi_taxonomy synonym: "Passion fruit woodiness potyvirus" EXACT equivalent_name [] synonym: "Passionfruit woodiness virus" EXACT equivalent_name [] synonym: "PWV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:31741 name: Wheat streak mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:156207 ! Tritimovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:31744 name: Rice yellow mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12137 ! Sobemovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:31770 name: Shallot virus X namespace: ncbi_taxonomy synonym: "shallot virus X ShVX" EXACT equivalent_name [] synonym: "ShVX" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:2843479 ! Acarallexivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:318548 name: Cichlinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:319056 ! New World cichlids property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:31870 name: Colletotrichum graminicola namespace: ncbi_taxonomy alt_id: NCBITaxon:5459 synonym: "Colletotrichopsis graminicola" RELATED synonym [] synonym: "Dicladium graminicola" RELATED synonym [] synonym: "Dicladium graminicolum" RELATED synonym [] synonym: "Glomerella graminicola" RELATED synonym [] synonym: "Steirochaete graminicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2707348 ! Colletotrichum graminicola species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:318706 name: Curvularia pallescens namespace: ncbi_taxonomy alt_id: NCBITaxon:491261 synonym: "Cochliobolus pallescens" RELATED synonym [] synonym: "Curvularia pallescens Boedijn, 1933" RELATED synonym [] synonym: "Pseudocochliobolus pallescens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:318708 name: Leptosphaeria coniothyrium namespace: ncbi_taxonomy synonym: "Sphaeria coniothyrium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5021 ! Leptosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:318829 name: Pyricularia oryzae namespace: ncbi_taxonomy synonym: "Magnaporthe oryzae" RELATED synonym [] synonym: "Magnaporthe oryzae B.C. Couch, 2002" RELATED synonym [] synonym: "rice blast fungus" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:48558 ! Pyricularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:318855 name: Dicarpella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2041450 ! Melanconiellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:318884 name: Rhododendron aff. alternans GKB-2005 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4346 ! Rhododendron property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:319 name: Pseudomonas savastanoi pv. phaseolicola namespace: ncbi_taxonomy alt_id: NCBITaxon:251732 synonym: "Pseudomonas syringae (PV. PHASEOLICOLA)" EXACT equivalent_name [] synonym: "Pseudomonas syringae phaseolicola" RELATED synonym [] synonym: "Pseudomonas syringae pv. phaseolicola" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:29438 ! Pseudomonas savastanoi [Term] id: NCBITaxon:319056 name: New World cichlids namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:8113 ! Cichlidae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:319086 name: Crenicichlini namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:318548 ! Cichlinae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:3193 name: Embryophyta namespace: ncbi_taxonomy synonym: "higher plants" EXACT common_name [] synonym: "land plants" EXACT common_name [] synonym: "land plants" RELATED blast_name [] synonym: "plants" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:131221 ! Streptophytina property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:31963 name: Clavibacter michiganensis subsp. nebraskensis namespace: ncbi_taxonomy synonym: "Clavibacter michiganense nebraskense" RELATED synonym [] synonym: "Clavibacter michiganensis nebraskensis" EXACT equivalent_name [] synonym: "Clavibacter nebraskensis nom. illegit." RELATED synonym [] synonym: "Corynebacterium michiganense subsp. nebraskense" RELATED synonym [] synonym: "Corynebacterium nebraskense" RELATED synonym [] xref: GC_ID:11 xref: PMID:29160202 is_a: NCBITaxon:28447 ! Clavibacter michiganensis property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:31964 name: Clavibacter michiganensis subsp. sepedonicus namespace: ncbi_taxonomy alt_id: NCBITaxon:59598 synonym: "Aplanobacter sepedonicum" RELATED synonym [] synonym: "Bacterium sepedonicum" RELATED synonym [] synonym: "Clavibacter michiganense sepedonicum" RELATED synonym [] synonym: "Clavibacter michiganensis sepedonicum" EXACT equivalent_name [] synonym: "Clavibacter sepedonicus nom. illegit." RELATED synonym [] synonym: "Corynebacterium michiganense subsp. sepedonicum" RELATED synonym [] synonym: "Corynebacterium sepedonicum" RELATED synonym [] synonym: "Mycobacterium sepedonicum" RELATED synonym [] synonym: "Phytomonas sepedonica" RELATED synonym [] synonym: "Pseudobacterium sepedonicum" RELATED synonym [] xref: GC_ID:11 xref: PMID:29160202 is_a: NCBITaxon:28447 ! Clavibacter michiganensis property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:31969 name: Mollicutes namespace: ncbi_taxonomy synonym: "Mollicutes Edward and Freundt 1967 (Approved Lists 1980)" RELATED synonym [] synonym: "mycoplasmas" RELATED blast_name [] synonym: "Mycoplasmas and walled relatives" RELATED synonym [] synonym: "Paramycetes" RELATED synonym [] xref: GC_ID:11 xref: PMID:11321122 xref: PMID:15143038 xref: PMID:17978244 xref: PMID:23606477 xref: PMID:2592342 xref: PMID:31385780 xref: PMID:31971499 xref: PMID:35947640 xref: PMID:8123554 xref: PMID:8863413 xref: PMID:8863414 is_a: NCBITaxon:544448 ! Mycoplasmatota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:32008 name: Burkholderia namespace: ncbi_taxonomy synonym: "Pseudomonas RNA homology group II" RELATED synonym [] xref: GC_ID:11 xref: PMID:10555347 xref: PMID:1283774 xref: PMID:25566316 is_a: NCBITaxon:119060 ! Burkholderiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:32033 name: Xanthomonadaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:67 synonym: "Lysobacteraceae" RELATED synonym [] synonym: "Xanthomonas group" EXACT common_name [] xref: GC_ID:11 xref: PMID:16559821 xref: PMID:24408949 xref: PMID:25481407 is_a: NCBITaxon:135614 ! Xanthomonadales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:320805 name: Phelipanche namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:216770 ! Orobancheae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:321 name: Pseudomonas syringae pv. syringae namespace: ncbi_taxonomy alt_id: NCBITaxon:1230467 synonym: "Pseudomonas syringae (PV. SYRINGAE)" RELATED synonym [] synonym: "Pseudomonas syringae syringae" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:317 ! Pseudomonas syringae [Term] id: NCBITaxon:321174 name: Cercosporella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:321813 name: Mauginiella namespace: ncbi_taxonomy synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:129384 ! Ascomycota incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:321814 name: Mauginiella scaettae namespace: ncbi_taxonomy alt_id: NCBITaxon:1707791 alt_id: NCBITaxon:1707792 alt_id: NCBITaxon:1707793 alt_id: NCBITaxon:1707794 alt_id: NCBITaxon:1707795 alt_id: NCBITaxon:1707796 alt_id: NCBITaxon:1707797 alt_id: NCBITaxon:1707798 alt_id: NCBITaxon:1707799 alt_id: NCBITaxon:1707800 alt_id: NCBITaxon:2082001 xref: GC_ID:1 is_a: NCBITaxon:321813 ! Mauginiella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:32201 name: Carya illinoinensis namespace: ncbi_taxonomy synonym: "Carya illinoensis" RELATED synonym [] synonym: "pecan" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:13402 ! Carya property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:32247 name: Rubus idaeus namespace: ncbi_taxonomy synonym: "European raspberry" EXACT common_name [] synonym: "red raspberry" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:23216 ! Rubus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:32262 name: Tetranychidae namespace: ncbi_taxonomy synonym: "spider mites" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:83146 ! Tetranychoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:32443 name: Teleostei namespace: ncbi_taxonomy synonym: "teleost fishes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:41665 ! Neopterygii property_value: has_rank NCBITaxon:infraclass [Term] id: NCBITaxon:324776 name: Coniothyrium wernsdorffiae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:78388 ! Coniothyrium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:324777 name: Marssonina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:76657 ! Dermateaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:32519 name: Ostariophysi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186634 ! Otomorpha property_value: has_rank NCBITaxon:subcohort [Term] id: NCBITaxon:32523 name: Tetrapoda namespace: ncbi_taxonomy synonym: "tetrapods" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1338369 ! Dipnotetrapodomorpha property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:32524 name: Amniota namespace: ncbi_taxonomy synonym: "amniotes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:32523 ! Tetrapoda property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:32525 name: Theria namespace: ncbi_taxonomy synonym: "Theria" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:40674 ! Mammalia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:325452 name: Phytophthora kernoviae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:32561 name: Sauria namespace: ncbi_taxonomy synonym: "Diapsida" RELATED synonym [] synonym: "diapsids" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:8457 ! Sauropsida property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:32644 name: unidentified namespace: ncbi_taxonomy alt_id: NCBITaxon:1780429 synonym: "miscellaneous nucleic acid" RELATED synonym [] synonym: "none" RELATED synonym [] synonym: "not shown" RELATED synonym [] synonym: "not specified" RELATED synonym [] synonym: "other" RELATED synonym [] synonym: "sonstige nucleic acid" RELATED synonym [] synonym: "unclassified sequence" RELATED synonym [] synonym: "unidentified organism" RELATED synonym [] synonym: "unidentified root endophyte" RELATED synonym [] synonym: "unknown" RELATED synonym [] synonym: "unknown organism" RELATED synonym [] synonym: "unspecified" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:12908 ! unclassified sequences property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:327263 name: unclassified Tenuivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12329 ! Tenuivirus [Term] id: NCBITaxon:328061 name: Radish mosaic virus namespace: ncbi_taxonomy synonym: "RaMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3048290 ! Comovirus raphani [Term] id: NCBITaxon:329010 name: Meruliopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1931355 ! Irpicaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:329018 name: Gloeoporus dichrous namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:81065 ! Gloeoporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33069 name: Pseudomonas viridiflava namespace: ncbi_taxonomy alt_id: NCBITaxon:1705700 synonym: "Phytomonas viridiflava" RELATED synonym [] synonym: "Pseudomonas syringae group genomosp. 6" RELATED synonym [] xref: GC_ID:11 xref: PMID:10319466 is_a: NCBITaxon:136849 ! Pseudomonas syringae group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33090 name: Viridiplantae namespace: ncbi_taxonomy synonym: "Chlorobionta" RELATED synonym [] synonym: "Chlorophyta/Embryophyta group" EXACT equivalent_name [] synonym: "chlorophyte/embryophyte group" EXACT equivalent_name [] synonym: "Chloroplastida" RELATED synonym [] synonym: "green plants" EXACT common_name [] synonym: "green plants" RELATED blast_name [] xref: GC_ID:1 xref: PMID:16248873 xref: PMID:30257078 is_a: NCBITaxon:2759 ! Eukaryota property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:33103 name: Ulvophyceae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23020233 is_a: NCBITaxon:3041 ! Chlorophyta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:33122 name: Schizanthus pinnatus namespace: ncbi_taxonomy alt_id: NCBITaxon:120075 alt_id: NCBITaxon:87009 synonym: "butterfly flower" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:24674 ! Schizanthus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3313 name: Pinidae namespace: ncbi_taxonomy alt_id: NCBITaxon:1445965 synonym: "Coniferales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:58019 ! Pinopsida property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:331356 name: Triticum aestivum/Phaeosphaeria nodorum mixed EST library namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119167 ! mixed EST libraries property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:331381 name: Puccinia recondita f. sp. secalis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:27348 ! Puccinia recondita property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:331382 name: Puccinia horiana namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33154 name: Opisthokonta namespace: ncbi_taxonomy synonym: "Fungi/Metazoa group" RELATED synonym [] synonym: "opisthokonts" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2759 ! Eukaryota property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:33169 name: Eremothecium gossypii namespace: ncbi_taxonomy synonym: "Ashbya gossypii (S.F. Ashby & W. Nowell) Guillierm., 1928" RELATED synonym [] synonym: "Nematospora gossypii" RELATED synonym [] xref: GC_ID:1 xref: PMID:12748053 xref: PMID:7662294 xref: PMID:9271109 is_a: NCBITaxon:33170 ! Eremothecium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33170 name: Eremothecium namespace: ncbi_taxonomy alt_id: NCBITaxon:1348568 alt_id: NCBITaxon:217889 alt_id: NCBITaxon:244058 alt_id: NCBITaxon:244059 alt_id: NCBITaxon:33168 alt_id: NCBITaxon:33172 alt_id: NCBITaxon:46675 synonym: "Ashbya" RELATED synonym [] synonym: "Holleya" RELATED synonym [] synonym: "Nematospora" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4893 ! Saccharomycetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33173 name: Eremothecium coryli namespace: ncbi_taxonomy synonym: "Nematospora coryli" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33170 ! Eremothecium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33174 name: Ophiosphaerella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5020 ! Phaeosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33175 name: Ophiosphaerella herpotricha namespace: ncbi_taxonomy alt_id: NCBITaxon:45295 synonym: "Ophiobolus herpotrichus" RELATED synonym [] synonym: "Phaeosphaeria herpotricha" RELATED synonym [] synonym: "Rhaphidophora herpotricha" RELATED synonym [] synonym: "Sphaeria herpotricha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33174 ! Ophiosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3318 name: Pinaceae namespace: ncbi_taxonomy synonym: "pine family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1446380 ! Pinales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:33194 name: Bipolaris namespace: ncbi_taxonomy alt_id: NCBITaxon:5015 synonym: "Cochliobolus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33196 name: Botrytis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33198 name: Drechslera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33199 name: Drechslera avenae namespace: ncbi_taxonomy synonym: "Helminthosporium avenae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33198 ! Drechslera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33202 name: Paecilomyces namespace: ncbi_taxonomy alt_id: NCBITaxon:311780 alt_id: NCBITaxon:5092 synonym: "Byssochlamys" RELATED synonym [] xref: GC_ID:1 xref: PMID:20198134 xref: PMID:27990336 is_a: NCBITaxon:1131624 ! Thermoascaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33208 name: Metazoa namespace: ncbi_taxonomy synonym: "Animalia" RELATED synonym [] synonym: "animals" RELATED blast_name [] synonym: "metazoans" EXACT genbank_common_name [] synonym: "multicellular animals" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:33213 name: Bilateria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6072 ! Eumetazoa property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:33218 name: Enoplia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119088 ! Enoplea property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:332405 name: Coniella diplodiella namespace: ncbi_taxonomy alt_id: NCBITaxon:251300 alt_id: NCBITaxon:509218 synonym: "Charrinia diplodiella" RELATED synonym [] synonym: "Coniothyrium diplodiella" RELATED synonym [] synonym: "Pilidiella diplodiella" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:172190 ! Coniella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:332470 name: unclassified Potyvirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus [Term] id: NCBITaxon:332690 name: Quinisulcius namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211154 ! Telotylenchidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:332691 name: Quinisulcius acutus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:332690 ! Quinisulcius property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:332715 name: Tylenchorhynchus nudus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:288494 ! Tylenchorhynchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33283 name: Tylenchomorpha namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6300 ! Tylenchina property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:33284 name: Tylenchoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33283 ! Tylenchomorpha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:33285 name: Meloidogyninae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:315429 ! Meloidogynidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:33286 name: Heteroderinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6301 ! Heteroderidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:333108 name: Septoria ostryae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33317 name: Protostomia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:33339 name: Palaeoptera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7496 ! Pterygota property_value: has_rank NCBITaxon:infraclass [Term] id: NCBITaxon:33340 name: Neoptera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7496 ! Pterygota property_value: has_rank NCBITaxon:infraclass [Term] id: NCBITaxon:33341 name: Polyneoptera namespace: ncbi_taxonomy alt_id: NCBITaxon:1955245 synonym: "Orthopteroidea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33340 ! Neoptera property_value: has_rank NCBITaxon:cohort [Term] id: NCBITaxon:33342 name: Paraneoptera namespace: ncbi_taxonomy synonym: "hemipteroid assemblage" RELATED synonym [] synonym: "Hemipteroidea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33340 ! Neoptera property_value: has_rank NCBITaxon:cohort [Term] id: NCBITaxon:333523 name: Puccinia arachidis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33365 name: Cicadomorpha namespace: ncbi_taxonomy synonym: "Clypeorrhyncha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1955247 ! Auchenorrhyncha property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:33368 name: Membracoidea namespace: ncbi_taxonomy synonym: "Cicadelloidea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33365 ! Cicadomorpha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:33373 name: Sternorrhyncha namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7524 ! Hemiptera property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:33375 name: Psylloidea namespace: ncbi_taxonomy alt_id: NCBITaxon:33374 synonym: "jumping plant lice" EXACT genbank_common_name [] synonym: "psyllids" EXACT common_name [] synonym: "psyllids" RELATED blast_name [] synonym: "Psylliformes" RELATED synonym [] synonym: "Psyllomorpha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33373 ! Sternorrhyncha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:33377 name: Aleyrodoidea namespace: ncbi_taxonomy alt_id: NCBITaxon:33376 synonym: "Aleyrodiformes" RELATED synonym [] synonym: "whiteflies" EXACT genbank_common_name [] synonym: "whiteflies" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:33373 ! Sternorrhyncha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:33379 name: Aleyrodinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7036 ! Aleyrodidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:33381 name: Coccoidea namespace: ncbi_taxonomy synonym: "scale insects" EXACT genbank_common_name [] synonym: "scale insects" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:33373 ! Sternorrhyncha property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:33392 name: Endopterygota namespace: ncbi_taxonomy synonym: "Holometabola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33340 ! Neoptera property_value: has_rank NCBITaxon:cohort [Term] id: NCBITaxon:33511 name: Deuterostomia namespace: ncbi_taxonomy synonym: "deuterostomes" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:33213 ! Bilateria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:3356 name: Pseudotsuga namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3318 ! Pinaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3357 name: Pseudotsuga menziesii namespace: ncbi_taxonomy synonym: "Abies menziesii" RELATED synonym [] synonym: "Abies menziesii Mirb., 1825" RELATED synonym [] synonym: "Douglas-fir" EXACT genbank_common_name [] synonym: "Pseudotsuga douglasii" RELATED synonym [] synonym: "Pseudotsuga taxifolia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3356 ! Pseudotsuga property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:335852 name: Apiospora arundinis namespace: ncbi_taxonomy alt_id: NCBITaxon:1671125 synonym: "Arthrinium arundinis" RELATED synonym [] synonym: "Gymnosporium arundinis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1811811 ! Apiospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:335854 name: Nigrospora oryzae namespace: ncbi_taxonomy alt_id: NCBITaxon:1551522 alt_id: NCBITaxon:631443 alt_id: NCBITaxon:668251 synonym: "Khuskia oryzae" RELATED synonym [] synonym: "Monotospora oryzae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:114230 ! Nigrospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33634 name: Stramenopiles namespace: ncbi_taxonomy synonym: "Chromophyta" RELATED in_part [] synonym: "Heterokonta" RELATED synonym [] synonym: "heterokonts" EXACT genbank_common_name [] synonym: "Straminipila" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2698737 ! Sar property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:33680 name: Myxogastria namespace: ncbi_taxonomy synonym: "myxomycete" RELATED synonym [] synonym: "Myxomycetes" RELATED synonym [] synonym: "Myxomycota" RELATED synonym [] synonym: "plasmodial slime molds" EXACT genbank_common_name [] synonym: "plasmodial slime molds" RELATED blast_name [] xref: GC_ID:1 xref: PMID:11062127 xref: PMID:9342353 is_a: NCBITaxon:142796 ! Eumycetozoa property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:336991 name: Pucciniastrum coryli namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:60204 ! Pucciniastrum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:337 name: Burkholderia glumae namespace: ncbi_taxonomy synonym: "Pseudomonas glumae" RELATED synonym [] xref: GC_ID:11 xref: PMID:16627650 is_a: NCBITaxon:32008 ! Burkholderia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:337343 name: California namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4027 ! Geraniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33760 name: Prune dwarf virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33763 name: Peanut mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:338 name: Xanthomonas namespace: ncbi_taxonomy synonym: "\"Phytomonas\" Bergey et al. 1923" RELATED synonym [] xref: GC_ID:11 xref: PMID:10758874 xref: PMID:11931143 xref: PMID:18048743 xref: PMID:21984675 xref: PMID:2275852 xref: PMID:9103617 is_a: NCBITaxon:32033 ! Xanthomonadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33823 name: Aphelenchoididae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:120862 ! Aphelenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:33886 name: Rathayibacter namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:85023 ! Microbacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:33888 name: Rathayibacter tritici namespace: ncbi_taxonomy synonym: "Clavibacter tritici" RELATED synonym [] synonym: "Corynebacterium tritici" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:33886 ! Rathayibacter property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:339 name: Xanthomonas campestris namespace: ncbi_taxonomy synonym: "Achromobacter lunatus" RELATED synonym [] synonym: "Bacillus campestris" RELATED synonym [] synonym: "Bacterium campestre" RELATED synonym [] synonym: "Phytomonas campestris" RELATED synonym [] synonym: "Pseudomonas campestris" RELATED synonym [] synonym: "Xanthomonas campestris var. aberrans" RELATED synonym [] synonym: "Xanthomonas campestris var. armoraceae" RELATED synonym [] xref: GC_ID:11 xref: PMID:10758892 xref: PMID:2275852 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:33926 name: Candidatus Phytoplasma namespace: ncbi_taxonomy alt_id: NCBITaxon:44062 synonym: "MLOs" BROAD acronym [] synonym: "Mycoplasma-like organisms" RELATED synonym [] synonym: "Phytoplasma" EXACT equivalent_name [] synonym: "plant yellows agents" EXACT genbank_common_name [] xref: GC_ID:11 xref: PMID:15280299 xref: PMID:17766869 xref: PMID:18676464 xref: PMID:20097798 xref: PMID:24097832 xref: PMID:25574038 xref: PMID:26928977 xref: PMID:27667728 xref: PMID:7520735 xref: PMID:7857801 xref: PMID:8123559 xref: PMID:8347505 is_a: NCBITaxon:2146 ! Acholeplasmataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:339419 name: unclassified Ilarvirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus [Term] id: NCBITaxon:3398 name: Magnoliopsida namespace: ncbi_taxonomy synonym: "Angiospermae" RELATED synonym [] synonym: "angiosperms" EXACT common_name [] synonym: "flowering plants" EXACT genbank_common_name [] synonym: "flowering plants" RELATED blast_name [] synonym: "Magnoliophyta" RELATED synonym [] xref: GC_ID:1 xref: PMID:25249442 is_a: NCBITaxon:58024 ! Spermatophyta property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:340 name: Xanthomonas campestris pv. campestris namespace: ncbi_taxonomy synonym: "Xanthomonas campestris (pv. campestris)" EXACT equivalent_name [] synonym: "Xanthomonas campestris campestris" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:339 ! Xanthomonas campestris [Term] id: NCBITaxon:340519 name: Aonidomytilus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:30080 ! Diaspididae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:342770 name: Pesotum aff. fragrans C1496 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:88710 ! Pesotum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:343 name: Xanthomonas translucens namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3432 name: Laurales namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24055602 is_a: NCBITaxon:232347 ! Magnoliidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:3433 name: Lauraceae namespace: ncbi_taxonomy synonym: "laurel family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3432 ! Laurales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3434 name: Persea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3433 ! Lauraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3435 name: Persea americana namespace: ncbi_taxonomy alt_id: NCBITaxon:1303660 alt_id: NCBITaxon:702085 synonym: "avocado" EXACT genbank_common_name [] synonym: "Laurus persea" RELATED synonym [] synonym: "Persea americana var. tolimanensis" RELATED synonym [] synonym: "Persea gratissima" RELATED synonym [] synonym: "Persea tolimanensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3434 ! Persea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34353 name: Dipodascaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:118261 synonym: "anamorphic Dipodascaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4892 ! Saccharomycetales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:34371 name: Erysiphaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:62702 xref: GC_ID:1 is_a: NCBITaxon:5120 ! Erysiphales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:34372 name: Blumeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:34373 name: Blumeria graminis namespace: ncbi_taxonomy alt_id: NCBITaxon:1961886 alt_id: NCBITaxon:5122 synonym: "Erysiphe graminis" RELATED synonym [] synonym: "grass mildew" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:34372 ! Blumeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34374 name: Leptosphaeriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:34375 synonym: "anamorphic Leptosphaeriaceae" RELATED synonym [] synonym: "Leptosphaeriaceae anamorphs" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:715340 ! Pleosporineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:34395 name: Chaetothyriales namespace: ncbi_taxonomy synonym: "black yeasts" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:451870 ! Chaetothyriomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:34397 name: Clavicipitaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:34398 xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:34399 name: Phomopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5117 ! Valsaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3440 name: Ranunculaceae namespace: ncbi_taxonomy synonym: "buttercup family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41768 ! Ranunculales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:34405 name: Colletotrichum dematium namespace: ncbi_taxonomy synonym: "Exosporium dematium" RELATED synonym [] synonym: "Lasiella dematium" RELATED synonym [] synonym: "Sphaeria dematium" RELATED synonym [] synonym: "Vermicularia dematium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2707353 ! Colletotrichum dematium species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34406 name: Colletotrichum destructivum namespace: ncbi_taxonomy alt_id: NCBITaxon:1585822 alt_id: NCBITaxon:1585823 alt_id: NCBITaxon:1585824 alt_id: NCBITaxon:1585825 alt_id: NCBITaxon:1585826 alt_id: NCBITaxon:1585828 alt_id: NCBITaxon:1585829 alt_id: NCBITaxon:1585830 alt_id: NCBITaxon:1585831 alt_id: NCBITaxon:1585832 alt_id: NCBITaxon:1585833 alt_id: NCBITaxon:1585834 alt_id: NCBITaxon:1585835 alt_id: NCBITaxon:1585836 xref: GC_ID:1 xref: PMID:25492986 is_a: NCBITaxon:2707350 ! Colletotrichum destructivum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34407 name: Colletotrichum kahawae namespace: ncbi_taxonomy alt_id: NCBITaxon:1215362 alt_id: NCBITaxon:1664325 synonym: "Colletotrichum kahawae subsp. kahawae" RELATED synonym [] xref: GC_ID:1 xref: PMID:23136459 is_a: NCBITaxon:2707338 ! Colletotrichum gloeosporioides species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34409 name: Colletotrichum sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:1981606 alt_id: NCBITaxon:2046632 synonym: "Glomerella sp." EXACT equivalent_name [] synonym: "Glomerella sp. (Glomerellaceae)" EXACT equivalent_name [] synonym: "Glomerella sp. (in: Fungi)" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2604346 ! unclassified Colletotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:344380 name: Ditylenchus angustus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:166009 ! Ditylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:344381 name: Helicotylenchus dihystera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:293581 ! Helicotylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:344392 name: Pratylenchus goodeyi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:344394 name: Rotylenchus robustus namespace: ncbi_taxonomy alt_id: NCBITaxon:288491 synonym: "Rotylenchus fallorobustus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:288490 ! Rotylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34446 name: Crinipellis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:654128 ! Marasmiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:34448 name: Marasmius namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:654128 ! Marasmiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:34458 name: Ganoderma boninense namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34461 name: Ganoderma lobatum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34474 name: Fomitopsis namespace: ncbi_taxonomy alt_id: NCBITaxon:40449 synonym: "Piptoporus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1769247 ! Fomitopsidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:34475 name: Rhodofomes roseus namespace: ncbi_taxonomy synonym: "Boletus roseus" RELATED synonym [] synonym: "Fomitopsis rosea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2066992 ! Rhodofomes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:344866 name: Helicobasidium mompa partitivirus V70 namespace: ncbi_taxonomy synonym: "Helicobasidium mompa virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1511808 ! Alphapartitivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34489 name: Mucoraceae namespace: ncbi_taxonomy alt_id: NCBITaxon:60183 synonym: "Thamnidiaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1344963 ! Mucorineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:344905 name: Cassava frogskin virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2788865 ! unclassified Reovirales property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34509 name: Heterodera namespace: ncbi_taxonomy alt_id: NCBITaxon:283889 synonym: "Afenestrata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33286 ! Heteroderinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:34510 name: Heterodera avenae namespace: ncbi_taxonomy synonym: "cereal cyst nematode" EXACT common_name [] synonym: "oat cyst nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:346 name: Xanthomonas citri namespace: ncbi_taxonomy alt_id: NCBITaxon:92829 synonym: "Xanthomonas axonopodis pv. citri" RELATED synonym [] synonym: "Xanthomonas campestris (pv. citri)" RELATED synonym [] xref: GC_ID:11 xref: PMID:16104350 xref: PMID:17183629 xref: PMID:17625160 xref: PMID:19196770 is_a: NCBITaxon:643453 ! Xanthomonas citri group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:347 name: Xanthomonas oryzae namespace: ncbi_taxonomy synonym: "\"Pseudomonas oryzae\" Uyeda and Ishiyama in Ishiyama 1926" RELATED synonym [] xref: GC_ID:11 xref: PMID:2275852 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:34735 name: Apoidea namespace: ncbi_taxonomy synonym: "bee" EXACT common_name [] synonym: "bees" EXACT genbank_common_name [] synonym: "bees" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:7434 ! Aculeata property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:3474 name: Ulmaceae namespace: ncbi_taxonomy synonym: "elm family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3744 ! Rosales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3481 name: Cannabaceae namespace: ncbi_taxonomy synonym: "Cannabidaceae" EXACT equivalent_name [] synonym: "Cannabinaceae" EXACT equivalent_name [] synonym: "hemp family" EXACT common_name [] synonym: "hop family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3744 ! Rosales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3482 name: Cannabis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3481 ! Cannabaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3483 name: Cannabis sativa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3482 ! Cannabis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3484 name: Humulus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3481 ! Cannabaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3485 name: Humulus japonicus namespace: ncbi_taxonomy alt_id: NCBITaxon:66388 synonym: "Humulus scandens auct." RELATED synonym [] synonym: "Japanese hop" EXACT genbank_common_name [] synonym: "kana-mugura" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3484 ! Humulus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3486 name: Humulus lupulus namespace: ncbi_taxonomy synonym: "common hop" EXACT common_name [] synonym: "European hop" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3484 ! Humulus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3502 name: Fagales namespace: ncbi_taxonomy alt_id: NCBITaxon:16713 alt_id: NCBITaxon:29741 alt_id: NCBITaxon:3519 xref: GC_ID:1 is_a: NCBITaxon:91835 ! fabids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:350796 name: Oidium mangiferae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62703 ! Oidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3514 name: Betulaceae namespace: ncbi_taxonomy synonym: "birch family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3502 ! Fagales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:351609 name: Cytospora aff. austromontana PPRI5926 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:117544 ! Cytospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3524 name: Caryophyllales namespace: ncbi_taxonomy alt_id: NCBITaxon:3614 alt_id: NCBITaxon:4352 alt_id: NCBITaxon:63764 synonym: "Centrospermae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1437201 ! Pentapetalae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:35285 name: Wheat spindle streak mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39731 ! Bymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:35290 name: Beet yellow stunt virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12160 ! Closterovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:352925 name: unclassified Fabavirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12269 ! Fabavirus [Term] id: NCBITaxon:353495 name: Bipolaris sp. bs55 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2619002 ! unclassified Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:354276 name: Enterobacter cloacae complex namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:12957918 xref: PMID:18716657 is_a: NCBITaxon:547 ! Enterobacter property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:35443 name: Trentepohliales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2546214 ! TCBD clade property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:35445 name: Trentepohliaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:35444 xref: GC_ID:1 is_a: NCBITaxon:35443 ! Trentepohliales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:35493 name: Streptophyta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33090 ! Viridiplantae property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:3554 name: Beta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1804621 ! Betoideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:355688 name: Agaricomycetes incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:155619 ! Agaricomycetes [Term] id: NCBITaxon:356 name: Hyphomicrobiales namespace: ncbi_taxonomy synonym: "alpha-2 proteobacteria" RELATED in_part [] synonym: "rhizobacteria" RELATED synonym [] synonym: "Rhizobiaceae group" RELATED synonym [] synonym: "Rhizobiales" RELATED synonym [] xref: GC_ID:11 xref: PMID:1854635 is_a: NCBITaxon:28211 ! Alphaproteobacteria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:3561 name: Spinacia namespace: ncbi_taxonomy synonym: "Spinacea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1307775 ! Anserineae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3562 name: Spinacia oleracea namespace: ncbi_taxonomy synonym: "Spinacea oleracea" EXACT equivalent_name [] synonym: "spinach" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3561 ! Spinacia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3568 name: Caryophyllaceae namespace: ncbi_taxonomy synonym: "pink family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3524 ! Caryophyllales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3569 name: Dianthus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1141493 ! Caryophylleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:357 name: Agrobacterium namespace: ncbi_taxonomy synonym: "Polymonas" RELATED synonym [] xref: GC_ID:11 xref: PMID:10758890 xref: PMID:11211278 xref: PMID:11760945 xref: PMID:13130068 xref: PMID:13130069 xref: PMID:16560572 xref: PMID:31818496 xref: PMID:8240952 xref: PMID:8494742 is_a: NCBITaxon:227290 ! Rhizobium/Agrobacterium group property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3570 name: Dianthus caryophyllus namespace: ncbi_taxonomy synonym: "carnation" EXACT common_name [] synonym: "clove pink" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3569 ! Dianthus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:357018 name: Septobasidium pilosum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5246 ! Septobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:357020 name: Septobasidium pseudopedicellatum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5246 ! Septobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:35718 name: Chaetomiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5139 ! Sordariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:35724 name: Macrophomina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:35725 name: Macrophomina phaseolina namespace: ncbi_taxonomy alt_id: NCBITaxon:348105 synonym: "charcoal rot" EXACT common_name [] synonym: "Macrophoma phaseolina" RELATED synonym [] synonym: "Microphomina phaseolina" RELATED synonym [] synonym: "Rhizoctonia bataticola" RELATED synonym [] synonym: "Sclerotium bataticola" RELATED synonym [] synonym: "Tiarosporella phaseolina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:35724 ! Macrophomina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:358 name: Agrobacterium tumefaciens namespace: ncbi_taxonomy alt_id: NCBITaxon:33048 alt_id: NCBITaxon:362 alt_id: NCBITaxon:363 alt_id: NCBITaxon:364 alt_id: NCBITaxon:365 alt_id: NCBITaxon:366 alt_id: NCBITaxon:367 alt_id: NCBITaxon:368 alt_id: NCBITaxon:369 alt_id: NCBITaxon:450636 alt_id: NCBITaxon:450640 alt_id: NCBITaxon:513651 alt_id: NCBITaxon:515156 synonym: "Achromobacter radiobacter" RELATED synonym [] synonym: "Agrobacterium genomic group 4" RELATED synonym [] synonym: "Agrobacterium genomosp. 4" RELATED synonym [] synonym: "Agrobacterium genomovar 4" RELATED synonym [] synonym: "Agrobacterium genomovar G4" RELATED synonym [] synonym: "Agrobacterium radiobacter" RELATED synonym [] synonym: "Alcaligenes radiobacter" RELATED synonym [] synonym: "Bacillus radiobacter" RELATED synonym [] synonym: "Bacterium radiobacter" RELATED synonym [] synonym: "Bacterium tumefaciens" RELATED synonym [] synonym: "Beijerinckia fluminensis" RELATED synonym [] synonym: "Phytomonas tumefaciens" RELATED synonym [] synonym: "Polymonas tumefaciens" RELATED synonym [] synonym: "Pseudomonas radiobacter" RELATED synonym [] synonym: "Pseudomonas tumefaciens" RELATED synonym [] synonym: "Rhizobium radiobacter" RELATED synonym [] xref: GC_ID:11 xref: PMID:11211278 xref: PMID:11760945 xref: PMID:11931171 xref: PMID:13130068 xref: PMID:16449463 xref: PMID:16560572 xref: PMID:19620377 xref: PMID:21515702 xref: PMID:25197445 xref: PMID:25288664 xref: PMID:32915125 xref: PMID:8240952 is_a: NCBITaxon:1183400 ! Agrobacterium tumefaciens complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:358223 name: Sarcostroma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1812776 ! Sporocadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:35886 name: Cuscuta gronovii namespace: ncbi_taxonomy synonym: "swamp dodder" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1824904 ! Cuscuta sect. Oxycarpae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:359109 name: Pistillaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:68808 ! Typhulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:359160 name: BOP clade namespace: ncbi_taxonomy synonym: "BEP clade" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:4479 ! Poaceae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:3593 name: Cactaceae namespace: ncbi_taxonomy synonym: "cactus family" EXACT common_name [] xref: GC_ID:1 xref: PMID:21613084 is_a: NCBITaxon:866800 ! Cactineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:35939 name: Impatiens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:25692 ! Balsaminaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3594 name: Schlumbergera namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:21236350 is_a: NCBITaxon:186276 ! Rhipsalideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:35982 name: Arceuthobium douglasii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:27219 ! Arceuthobium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:360141 name: Spiroplasma sp. ad204 namespace: ncbi_taxonomy xref: GC_ID:4 is_a: NCBITaxon:2637901 ! unclassified Spiroplasma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3602 name: Vitaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:39206 synonym: "grape family" EXACT common_name [] synonym: "Vitidaceae" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:403667 ! Vitales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3603 name: Vitis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2304100 ! Viteae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:36044 name: Erysiphe pisi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5121 ! Erysiphe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36050 name: Fusarium poae namespace: ncbi_taxonomy alt_id: NCBITaxon:2081993 synonym: "Sporotrichum poae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:569360 ! Fusarium sambucinum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36064 name: Cantharellales namespace: ncbi_taxonomy alt_id: NCBITaxon:28998 alt_id: NCBITaxon:34424 alt_id: NCBITaxon:411557 alt_id: NCBITaxon:411562 synonym: "Ceratobasidiales" RELATED synonym [] synonym: "Tulasnellales" RELATED synonym [] xref: GC_ID:1 xref: PMID:17572334 is_a: NCBITaxon:355688 ! Agaricomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:36080 name: Mucor circinelloides namespace: ncbi_taxonomy alt_id: NCBITaxon:101506 alt_id: NCBITaxon:1618004 alt_id: NCBITaxon:342806 alt_id: NCBITaxon:70416 synonym: "Circinomucor circinelloides" RELATED synonym [] synonym: "Mucor circinelloides f. circinelloides" RELATED synonym [] synonym: "Mucor circinelloides Tiegh., 1875" RELATED synonym [] synonym: "Rhizomucor circinelloides" RELATED synonym [] synonym: "Rhizomucor circinelloides f. circinelloides" RELATED synonym [] synonym: "Rhizomucor regularior" RELATED synonym [] synonym: "Rhizomucor regularior (R.Y. Zheng & G.Q. Chen) R.Y. Zheng, X.Y. Liu & R.Y. Li, 2009" RELATED synonym [] synonym: "Rhizomucor variabilis var. regularior" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4830 ! Mucor property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36090 name: Globodera pallida namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:31242 ! Globodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:362338 name: Hirschmanniella oryzae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46009 ! Hirschmanniella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3629 name: Malvaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:3639 alt_id: NCBITaxon:45192 alt_id: NCBITaxon:45323 synonym: "mallow family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41938 ! Malvales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3633 name: Gossypium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:214907 ! Malvoideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:36331 name: Globisporangium irregulare namespace: ncbi_taxonomy alt_id: NCBITaxon:482709 alt_id: NCBITaxon:482718 synonym: "Pythium irregulare" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3635 name: Gossypium hirsutum namespace: ncbi_taxonomy synonym: "American cotton" EXACT common_name [] synonym: "American upland cotton" EXACT common_name [] synonym: "cotton" EXACT genbank_common_name [] synonym: "Gossypium hirsutum subsp. mexicanum" RELATED synonym [] synonym: "Gossypium lanceolatum" RELATED synonym [] synonym: "Gossypium purpurascens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3633 ! Gossypium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:363723 name: Scutellonema brachyurum namespace: ncbi_taxonomy alt_id: NCBITaxon:364631 synonym: "Rotylenchus brachyurus Steiner, 1938" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:229470 ! Scutellonema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3640 name: Theobroma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:214909 ! Byttnerioideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:36403 name: Potato virus T namespace: ncbi_taxonomy synonym: "Potato trichovirus T" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1232754 ! Tepovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3641 name: Theobroma cacao namespace: ncbi_taxonomy synonym: "cacao" EXACT genbank_common_name [] synonym: "chocolate" EXACT common_name [] synonym: "cocoa" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3640 ! Theobroma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:364270 name: Apiineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4036 ! Apiales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:36453 name: Coconut cadang-cadang viroid namespace: ncbi_taxonomy alt_id: NCBITaxon:12891 synonym: "Cadang-cadang coconut viroid" EXACT equivalent_name [] synonym: "Coconut cadang cadang viroid" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:185754 ! Cocadviroid property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3646 name: Malpighiales namespace: ncbi_taxonomy alt_id: NCBITaxon:3976 alt_id: NCBITaxon:40028 alt_id: NCBITaxon:4003 alt_id: NCBITaxon:4333 alt_id: NCBITaxon:4385 synonym: "Violales" RELATED in_part [] synonym: "Violanae" RELATED in_part [] xref: GC_ID:1 xref: PMID:23045684 is_a: NCBITaxon:91835 ! fabids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:364625 name: Aorolaimus namespace: ncbi_taxonomy synonym: "Nectopelta" RELATED synonym [] synonym: "Peltamigratus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:211161 ! Hoplolaiminae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:364627 name: Helicotylenchus multicinctus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:293581 ! Helicotylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3647 name: Caricaceae namespace: ncbi_taxonomy synonym: "papaya family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3699 ! Brassicales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3648 name: Carica namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3647 ! Caricaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3649 name: Carica papaya namespace: ncbi_taxonomy synonym: "mamon" EXACT common_name [] synonym: "papaya" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3648 ! Carica property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3650 name: Cucurbitaceae namespace: ncbi_taxonomy synonym: "cucumber family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:71239 ! Cucurbitales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3653 name: Citrullus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003877 ! Benincaseae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:36534 name: Chalara sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:5497 synonym: "Chalaropsis sp." RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2628266 ! unclassified Chalara property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3654 name: Citrullus lanatus namespace: ncbi_taxonomy synonym: "Citrullus battich" RELATED synonym [] synonym: "wild melon" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3653 ! Citrullus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3655 name: Cucumis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003877 ! Benincaseae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3656 name: Cucumis melo namespace: ncbi_taxonomy alt_id: NCBITaxon:69309 synonym: "muskmelon" EXACT genbank_common_name [] synonym: "Oriental melon" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3655 ! Cucumis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3659 name: Cucumis sativus namespace: ncbi_taxonomy synonym: "cucumber" EXACT genbank_common_name [] synonym: "cucumbers" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3655 ! Cucumis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36596 name: Prunus armeniaca namespace: ncbi_taxonomy alt_id: NCBITaxon:262400 synonym: "apricot" EXACT genbank_common_name [] synonym: "Armeniaca vulgaris" RELATED synonym [] synonym: "Armeniaca vulgaris var. glabra" RELATED synonym [] synonym: "Armeniaca vulgaris var. vulgaris" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3754 ! Prunus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3660 name: Cucurbita namespace: ncbi_taxonomy synonym: "marrows" EXACT genbank_common_name [] synonym: "pumpkins" EXACT common_name [] synonym: "squashes" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1003878 ! Cucurbiteae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3663 name: Cucurbita pepo namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:11782554 is_a: NCBITaxon:3660 ! Cucurbita property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3664 name: Cucurbita pepo subsp. pepo namespace: ncbi_taxonomy alt_id: NCBITaxon:184144 synonym: "Cucurbita pepo var. medullosa" RELATED synonym [] synonym: "Cucurbita pepo var. pepo" RELATED synonym [] synonym: "field pumpkin" EXACT common_name [] synonym: "vegetable marrow" EXACT genbank_common_name [] xref: GC_ID:1 xref: PMID:11782554 is_a: NCBITaxon:3663 ! Cucurbita pepo property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:36648 name: Penicillium hirsutum namespace: ncbi_taxonomy alt_id: NCBITaxon:60179 synonym: "Penicillium corymbiferum" RELATED synonym [] synonym: "Penicillium hirsutum var. hirsutum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3665 name: Cucurbita pepo var. melopepo namespace: ncbi_taxonomy synonym: "Cucurbita pepo subsp. pepo var. melopepo" RELATED synonym [] synonym: "zucchini" EXACT genbank_common_name [] xref: GC_ID:1 xref: PMID:11782554 is_a: NCBITaxon:3664 ! Cucurbita pepo subsp. pepo property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:36651 name: Penicillium digitatum namespace: ncbi_taxonomy synonym: "Monilia digitata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36655 name: Penicillium aurantiogriseum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:366650 name: Xanthomonas alfalfae namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:16104350 xref: PMID:17183629 xref: PMID:17473228 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36746 name: Pseudomonas cichorii namespace: ncbi_taxonomy synonym: "Bacterium cichorii" RELATED synonym [] synonym: "Bacterium formosanum" RELATED synonym [] synonym: "Chlorobacter cichorii" RELATED synonym [] synonym: "Phytomonas cichorii" RELATED synonym [] synonym: "probable synonym: \"Pseudomonas papaveris\" Lelliott and Wallace 1955" RELATED synonym [] synonym: "Pseudomonas endiviae" RELATED synonym [] synonym: "Pseudomonas papaveris" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:136849 ! Pseudomonas syringae group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36747 name: Orobanche namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:216770 ! Orobancheae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:367877 name: Raveneliaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:145792 alt_id: NCBITaxon:190594 synonym: "Chaconiaceae" RELATED synonym [] synonym: "Uropyxidaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:367878 name: Sphenospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5262 ! Pucciniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:367881 name: Sphenospora kevorkianii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:367878 ! Sphenospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3683 name: Passifloraceae namespace: ncbi_taxonomy synonym: "passionflower famly" EXACT common_name [] xref: GC_ID:1 xref: PMID:23045684 is_a: NCBITaxon:3646 ! Malpighiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3684 name: Passiflora namespace: ncbi_taxonomy alt_id: NCBITaxon:231189 alt_id: NCBITaxon:298514 alt_id: NCBITaxon:340648 synonym: "Hollrungia" RELATED synonym [] synonym: "passionflowers" EXACT genbank_common_name [] synonym: "Tetrapathea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3683 ! Passifloraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:368617 name: unclassified Luteovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12036 ! Luteovirus [Term] id: NCBITaxon:36902 name: Medicago sativa subsp. x varia namespace: ncbi_taxonomy alt_id: NCBITaxon:604341 synonym: "Medicago sativa nothosubsp. hemicycla" RELATED synonym [] synonym: "Medicago sativa nothosubsp. varia" EXACT equivalent_name [] synonym: "Medicago sativa subsp. caerulea x Medicago falcata" RELATED synonym [] synonym: "Medicago sativa subsp. falcata x Medicago sativa subsp. sativa" EXACT equivalent_name [] synonym: "Medicago sativa subsp. hemicycla" RELATED synonym [] synonym: "Medicago sativa subsp. sativa x Medicago sativa subsp. falcata" RELATED synonym [] synonym: "Medicago sativa subsp. varia" EXACT equivalent_name [] synonym: "Medicago sativa subsp. x hemicycla" RELATED synonym [] synonym: "Medicago sativa x Medicago falcata" EXACT equivalent_name [] synonym: "Medicago x varia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3879 ! Medicago sativa property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:36922 name: Diaporthe namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:767018 ! Diaporthaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:36923 name: Diaporthe phaseolorum namespace: ncbi_taxonomy alt_id: NCBITaxon:1115739 alt_id: NCBITaxon:2172585 alt_id: NCBITaxon:2211208 synonym: "Sphaeria phaseolorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:36937 name: Mononychellus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:32262 ! Tetranychidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:369781 name: Plasmoverna namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:369782 name: Plasmoverna pygmaea namespace: ncbi_taxonomy alt_id: NCBITaxon:120414 synonym: "Botrytis pygmaea" RELATED synonym [] synonym: "Plasmopara pygmaea" RELATED synonym [] synonym: "Plasmoverna pygmea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:369781 ! Plasmoverna property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3699 name: Brassicales namespace: ncbi_taxonomy synonym: "Capparales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:91836 ! malvids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:3700 name: Brassicaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:25773 synonym: "Cruciferae" EXACT equivalent_name [] synonym: "mustard family" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3699 ! Brassicales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:370421 name: Albuginales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4762 ! Oomycota property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:3705 name: Brassica namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:981071 ! Brassiceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:370644 name: Primula aff. denticulata Mast s.n. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:49647 ! Primula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3707 name: Brassica juncea namespace: ncbi_taxonomy synonym: "brown mustard" EXACT common_name [] synonym: "Indian mustard" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3705 ! Brassica property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3708 name: Brassica napus namespace: ncbi_taxonomy alt_id: NCBITaxon:36503 synonym: "oilseed rape" EXACT common_name [] synonym: "rape" EXACT genbank_common_name [] synonym: "rapeseeds" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3705 ! Brassica property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3711 name: Brassica rapa namespace: ncbi_taxonomy alt_id: NCBITaxon:3706 synonym: "field mustard" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3705 ! Brassica property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:371110 name: Camarosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1582909 ! Pleosporineae incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:371119 name: Physalospora zeicola namespace: ncbi_taxonomy synonym: "Diplodia frumenti" RELATED synonym [] synonym: "Diplodia frumenti Ellis & Everh." RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:186525 ! Physalospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:371126 name: Stenocarpella macrospora namespace: ncbi_taxonomy synonym: "Stenocarpella zeae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:238244 ! Stenocarpella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:37128 name: Potato mop-top virus namespace: ncbi_taxonomy synonym: "PMTV" BROAD genbank_acronym [] synonym: "Potato mop top virus" EXACT equivalent_name [] synonym: "potato mop-top furovirus PMTV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:186886 ! Pomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:372025 name: Ascochyta fabae namespace: ncbi_taxonomy alt_id: NCBITaxon:547105 synonym: "Didymella fabae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3725 name: Raphanus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:981071 ! Brassiceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:373114 name: Blumeriella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2793945 ! Drepanopezizaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:373115 name: Blumeriella jaapii namespace: ncbi_taxonomy synonym: "Higginsia jaapii" RELATED synonym [] synonym: "Pseudopeziza jaapii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:373114 ! Blumeriella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:37357 name: Plasmodiophorida namespace: ncbi_taxonomy synonym: "Plasmodiophorales" RELATED synonym [] synonym: "Plasmodiophoromycetes" RELATED synonym [] synonym: "Plasmodiophoromycota" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2779609 ! Phytomyxea property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:37358 name: Plasmodiophoridae namespace: ncbi_taxonomy synonym: "Plasmodiophoraceae" RELATED synonym [] synonym: "plasmodiophorids" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:37357 ! Plasmodiophorida property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:37359 name: Plasmodiophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37358 ! Plasmodiophoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:37360 name: Plasmodiophora brassicae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37359 ! Plasmodiophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3744 name: Rosales namespace: ncbi_taxonomy alt_id: NCBITaxon:3473 alt_id: NCBITaxon:3601 alt_id: NCBITaxon:4266 xref: GC_ID:1 is_a: NCBITaxon:91835 ! fabids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:3745 name: Rosaceae namespace: ncbi_taxonomy synonym: "Malaceae" RELATED synonym [] synonym: "rose family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3744 ! Rosales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3746 name: Fragaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1184124 ! Fragariinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:37463 name: Phoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3747 name: Fragaria x ananassa namespace: ncbi_taxonomy alt_id: NCBITaxon:3748 synonym: "Fragaria ananassa" RELATED synonym [] synonym: "Fragaria chiloensis x Fragaria virginiana" RELATED synonym [] synonym: "Fragaria virginiana x Fragaria chiloensis" RELATED synonym [] synonym: "strawberry" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3746 ! Fragaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3749 name: Malus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:721813 ! Maleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:37495 name: Euphorbia pulcherrima namespace: ncbi_taxonomy synonym: "poinsettia" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1335588 ! Euphorbia subsect. Stormieae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3750 name: Malus domestica namespace: ncbi_taxonomy synonym: "apple" EXACT genbank_common_name [] synonym: "apple tree" EXACT common_name [] synonym: "cultivated apple" EXACT common_name [] synonym: "Malus communis" RELATED synonym [] synonym: "Malus pumila auct." RELATED synonym [] synonym: "Malus pumila var. domestica" RELATED synonym [] synonym: "Malus sylvestris var. domestica" RELATED synonym [] synonym: "Malus x domestica" RELATED synonym [] synonym: "Pyrus malus" RELATED synonym [] synonym: "Pyrus malus var. domestica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3749 ! Malus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3754 name: Prunus namespace: ncbi_taxonomy alt_id: NCBITaxon:140650 alt_id: NCBITaxon:203800 synonym: "Amygdalus" RELATED synonym [] synonym: "Armeniaca" RELATED synonym [] synonym: "Cerasus" RELATED synonym [] synonym: "Maddenia" RELATED synonym [] synonym: "Prunus subg. Amygdalus" RELATED synonym [] synonym: "Prunus subg. Armeniaca" RELATED synonym [] xref: GC_ID:1 xref: PMID:24631854 is_a: NCBITaxon:721805 ! Amygdaleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3755 name: Prunus dulcis namespace: ncbi_taxonomy alt_id: NCBITaxon:3757 synonym: "almond" EXACT genbank_common_name [] synonym: "Amygdalus communis" RELATED synonym [] synonym: "Amygdalus dulcis" RELATED synonym [] synonym: "Prunus amygdalus" RELATED synonym [] synonym: "Prunus communis" RELATED synonym [] synonym: "Prunus dulcis var. sativa" RELATED synonym [] synonym: "sweet almond" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3754 ! Prunus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:37567 name: Ditrysia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41197 ! Heteroneura property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:37570 name: Noctuoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:104431 ! Obtectomera property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:37572 name: Papilionoidea namespace: ncbi_taxonomy synonym: "butterflies" EXACT genbank_common_name [] synonym: "butterflies" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:104431 ! Obtectomera property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:3760 name: Prunus persica namespace: ncbi_taxonomy alt_id: NCBITaxon:203801 synonym: "Amygdalus persica" RELATED synonym [] synonym: "peach" EXACT genbank_common_name [] synonym: "Persica vulgaris" RELATED synonym [] synonym: "Prunus persica var. densa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3754 ! Prunus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3764 name: Rosa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1176516 ! Rosoideae incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3766 name: Pyrus namespace: ncbi_taxonomy synonym: "pears" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:721813 ! Maleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:37733 name: Prunus necrotic ringspot virus namespace: ncbi_taxonomy synonym: "PNRSV" BROAD acronym [] synonym: "Prunus necrotic ring spot virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3781 name: Crassulaceae namespace: ncbi_taxonomy synonym: "stonecrop family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41946 ! Saxifragales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:378266 name: Meripilaceae namespace: ncbi_taxonomy synonym: "Rigidoporaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:37840 name: Pestalotiopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1812776 ! Sporocadaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:378833 name: Sowbane mosaic virus namespace: ncbi_taxonomy alt_id: NCBITaxon:502178 synonym: "Rubus chlorotic mottle virus" EXACT equivalent_name [] synonym: "SoMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12137 ! Sobemovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:379 name: Rhizobium namespace: ncbi_taxonomy synonym: "Phytomyxa" RELATED synonym [] synonym: "Rhizobacterium" RELATED synonym [] xref: GC_ID:11 xref: PMID:10758890 xref: PMID:11211278 xref: PMID:13130068 xref: PMID:13130069 xref: PMID:1371066 xref: PMID:8240956 xref: PMID:8494742 xref: PMID:8573502 is_a: NCBITaxon:227290 ! Rhizobium/Agrobacterium group property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:37937 name: Ramichloridium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:744530 ! Dissoconiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:37960 name: unclassified Partitiviridae namespace: ncbi_taxonomy alt_id: NCBITaxon:1211778 alt_id: NCBITaxon:1511838 alt_id: NCBITaxon:344865 synonym: "unassigned Partitiviridae" EXACT equivalent_name [] synonym: "unclassified Alphacryptovirus" EXACT equivalent_name [] synonym: "unclassified Partitivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:11012 ! Partitiviridae [Term] id: NCBITaxon:37989 name: Xylariales namespace: ncbi_taxonomy synonym: "Sphaeriales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:222545 ! Xylariomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:37990 name: Xylariaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:397190 synonym: "Sphaeriaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:37991 name: Xylaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37990 ! Xylariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3803 name: Fabaceae namespace: ncbi_taxonomy synonym: "Leguminosae" RELATED synonym [] synonym: "pea family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:72025 ! Fabales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:380354 name: Puccinia coronata f. sp. lolii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:219187 ! Puccinia coronata var. lolii property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:380358 name: Xanthomonas albilineans GPE PC73 namespace: ncbi_taxonomy synonym: "Xanthomonas albilineans str. GPE PC73" EXACT equivalent_name [] synonym: "Xanthomonas albilineans strain GPE PC73" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:20017926 is_a: NCBITaxon:29447 ! Xanthomonas albilineans property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:38037 name: Rhynchosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2316155 ! Ploettnerulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:38038 name: Rhynchosporium secalis namespace: ncbi_taxonomy synonym: "leaf blotch of barley" EXACT genbank_common_name [] synonym: "Marssonia secalis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:38037 ! Rhynchosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38062 name: Cassava vein mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3047736 ! Cavemovirus venamanihotis [Term] id: NCBITaxon:38074 name: Ostropales namespace: ncbi_taxonomy alt_id: NCBITaxon:146303 alt_id: NCBITaxon:88633 synonym: "Gyalectales" RELATED synonym [] synonym: "Trichotheliales" RELATED synonym [] xref: GC_ID:1 xref: PMID:15120381 xref: PMID:17572334 is_a: NCBITaxon:388283 ! Ostropomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:38124 name: Triozidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33375 ! Psylloidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:38130 name: Terebrantia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:30262 ! Thysanoptera property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:3814 name: Papilionoideae namespace: ncbi_taxonomy alt_id: NCBITaxon:24958 synonym: "Faboideae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3803 ! Fabaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:3817 name: Arachis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2231390 ! Pterocarpus clade property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3818 name: Arachis hypogaea namespace: ncbi_taxonomy synonym: "goober" EXACT common_name [] synonym: "ground-nut" EXACT common_name [] synonym: "peanut" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3817 ! Arachis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:381993 name: Eucephalus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2841736 ! Symphiotrichinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:381994 name: Eucephalus glabratus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:381993 ! Eucephalus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3820 name: Cajanus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:163735 ! Phaseoleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3821 name: Cajanus cajan namespace: ncbi_taxonomy synonym: "pigeon pea" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3820 ! Cajanus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38236 name: Cattleya namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:158408 ! Laeliinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3826 name: Cicer namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:163722 ! Cicereae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3827 name: Cicer arietinum namespace: ncbi_taxonomy synonym: "chickpea" EXACT genbank_common_name [] synonym: "garbanzo" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3826 ! Cicer property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:383679 name: Fomitopsis meliae namespace: ncbi_taxonomy alt_id: NCBITaxon:1333634 synonym: "Fomes meliae" RELATED synonym [] synonym: "Polyporus meliae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34474 ! Fomitopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38447 name: Monilinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:38448 name: Monilinia fructicola namespace: ncbi_taxonomy synonym: "Ciboria fructicola" RELATED synonym [] synonym: "Monilia fructicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:38447 ! Monilinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38449 name: Cristulariella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:38451 name: Sclerotinia minor namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5179 ! Sclerotinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38457 name: Monilinia fructigena namespace: ncbi_taxonomy synonym: "Torula fructigena" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:38447 ! Monilinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3846 name: Glycine namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:163735 ! Phaseoleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3847 name: Glycine max namespace: ncbi_taxonomy synonym: "Phaseolus max" RELATED synonym [] synonym: "soybean" EXACT genbank_common_name [] synonym: "soybeans" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1462606 ! Glycine subgen. Soja property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38492 name: Stromatinia cepivora namespace: ncbi_taxonomy synonym: "Sclerotium cepivorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:66101 ! Stromatinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:385256 name: Gekkoninae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:8561 ! Gekkonidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:3863 name: Lens namespace: ncbi_taxonomy synonym: "Lens" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:163743 ! Fabeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3864 name: Lens culinaris namespace: ncbi_taxonomy alt_id: NCBITaxon:129391 alt_id: NCBITaxon:36511 alt_id: NCBITaxon:397259 synonym: "Lens esculenta" RELATED synonym [] synonym: "lentil" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3863 ! Lens property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3877 name: Medicago namespace: ncbi_taxonomy synonym: "medics" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:163742 ! Trifolieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3879 name: Medicago sativa namespace: ncbi_taxonomy alt_id: NCBITaxon:56147 synonym: "alfalfa" EXACT common_name [] synonym: "lucerne" EXACT common_name [] synonym: "Medicago sativa subsp. sativa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3877 ! Medicago property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38820 name: Poales namespace: ncbi_taxonomy alt_id: NCBITaxon:4478 alt_id: NCBITaxon:4727 xref: GC_ID:1 xref: PMID:26350789 is_a: NCBITaxon:4734 ! commelinids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:388283 name: Ostropomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1520881 ! OSLEUM clade property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:3883 name: Phaseolus namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:21980163 is_a: NCBITaxon:163735 ! Phaseoleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3885 name: Phaseolus vulgaris namespace: ncbi_taxonomy synonym: "French bean" EXACT common_name [] synonym: "kidney bean" EXACT common_name [] synonym: "string bean" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3883 ! Phaseolus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3887 name: Pisum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:163743 ! Fabeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3888 name: Pisum sativum namespace: ncbi_taxonomy alt_id: NCBITaxon:169178 synonym: "garden pea" EXACT genbank_common_name [] synonym: "pea" EXACT common_name [] synonym: "peas" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3887 ! Pisum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38902 name: Curvularia inaequalis namespace: ncbi_taxonomy alt_id: NCBITaxon:2082011 synonym: "Helminthosporium inaequale" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:38944 name: Flammulina namespace: ncbi_taxonomy synonym: "Flammulina" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:862241 ! Physalacriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:38945 name: Flammulina velutipes namespace: ncbi_taxonomy synonym: "Agaricus velutipes" RELATED synonym [] synonym: "Collybia velutipes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:38944 ! Flammulina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:389487 name: Acrophialophora namespace: ncbi_taxonomy synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:35718 ! Chaetomiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3898 name: Trifolium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:163742 ! Trifolieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:39046 name: Cassava common mosaic virus namespace: ncbi_taxonomy synonym: "Cassava common mosaic virus (CsCMV)" EXACT equivalent_name [] synonym: "CsCMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12176 ! Potexvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:39058 name: Garlic mite-borne mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12431 ! Garlic virus C [Term] id: NCBITaxon:390850 name: Meloidogyne enterolobii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:391091 name: Acrophialophora fusispora namespace: ncbi_taxonomy synonym: "Paecilomyces fusisporus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:389487 ! Acrophialophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:391228 name: Beet curly top Iran virus namespace: ncbi_taxonomy synonym: "Iranian beet curly top curtovirus" EXACT equivalent_name [] synonym: "Iranian beet curly top virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1298630 ! Becurtovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3913 name: Vigna namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:21980163 is_a: NCBITaxon:163735 ! Phaseoleae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:39180 name: Corticium namespace: ncbi_taxonomy synonym: "Corticium" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:5304 ! Corticiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:391912 name: Sweet potato leaf speckling virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2169577 ! Solemoviridae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:39291 name: Agroathelia rolfsii name: Athelia rolfsii namespace: ncbi_taxonomy alt_id: NCBITaxon:109385 synonym: "Athelia rolfsii" RELATED synonym [] synonym: "Corticium rolfsii" RELATED synonym [] synonym: "Sclerotium rolfsii" RELATED anamorph [] synonym: "Sclerotium rolfsii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3072477 ! Agroathelia is_a: NCBITaxon:5309 ! Athelia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3934 name: Onagraceae namespace: ncbi_taxonomy synonym: "evening-primrose family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41944 ! Myrtales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:395590 name: Zasmidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3963 name: Loranthaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:26753 synonym: "catkin mistletoe family" EXACT common_name [] synonym: "showy mistletoe family" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:41947 ! Santalales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:396331 name: Phanerochaetaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:202691 synonym: "Bjerkanderaceae" RELATED synonym [] synonym: "Hapalopilaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3967 name: Phoradendron namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003255 ! Viscaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:39681 name: Asparagus virus 2 namespace: ncbi_taxonomy synonym: "AV-2" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3970 name: Phoradendron leucarpum namespace: ncbi_taxonomy synonym: "American mistletoe" EXACT genbank_common_name [] synonym: "Phoradendron serotinum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3967 ! Phoradendron property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:39702 name: Septoria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:39703 name: Septoria lycopersici namespace: ncbi_taxonomy synonym: "tomato leaf spot fungus" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:3971 name: Viscum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003255 ! Viscaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3972 name: Viscum album namespace: ncbi_taxonomy synonym: "European mistletoe" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3971 ! Viscum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:39729 name: Potyviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732550 ! Patatavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:39730 name: Rymovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39729 ! Potyviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:39731 name: Bymovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39729 ! Potyviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:39738 name: Tombusviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732548 ! Tolivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:39740 name: Bromoviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732544 ! Martellivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:39760 name: Idaeovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732890 ! Mayoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3977 name: Euphorbiaceae namespace: ncbi_taxonomy synonym: "spurge family" EXACT common_name [] xref: GC_ID:1 xref: PMID:23045684 is_a: NCBITaxon:3646 ! Malpighiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:3982 name: Manihot namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:235883 ! Manihoteae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3983 name: Manihot esculenta namespace: ncbi_taxonomy alt_id: NCBITaxon:109657 synonym: "cassava" EXACT genbank_common_name [] synonym: "Manihot utilissima" RELATED synonym [] synonym: "manioc" EXACT common_name [] synonym: "tapioca" EXACT common_name [] synonym: "yuca" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3982 ! Manihot property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:398385 name: Physalospora obtusa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186525 ! Physalospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:398403 name: Dolichodoridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:398404 name: Dolichodorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:398403 ! Dolichodoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:3990 name: Euphorbia namespace: ncbi_taxonomy alt_id: NCBITaxon:212285 synonym: "spurges" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:235895 ! Euphorbieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:399129 name: Cryphonectriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:39953 name: Exserohilum prolatum namespace: ncbi_taxonomy alt_id: NCBITaxon:1702027 synonym: "Setosphaeria prolata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:91493 ! Exserohilum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4004 name: Linaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:124918 synonym: "flax family" EXACT common_name [] xref: GC_ID:1 xref: PMID:23045684 is_a: NCBITaxon:3646 ! Malpighiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4005 name: Linum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4004 ! Linaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4006 name: Linum usitatissimum namespace: ncbi_taxonomy synonym: "flax" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4005 ! Linum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4011 name: Anacardiaceae namespace: ncbi_taxonomy synonym: "sumac family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41937 ! Sapindales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40125 name: Bipolaris victoriae namespace: ncbi_taxonomy alt_id: NCBITaxon:74423 synonym: "Cochliobolus victoriae" RELATED synonym [] synonym: "Drechslera victoriae" RELATED synonym [] synonym: "Helminthosporium victoriae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40199 name: Fusarium avenaceum namespace: ncbi_taxonomy alt_id: NCBITaxon:1565509 alt_id: NCBITaxon:1582856 alt_id: NCBITaxon:502706 alt_id: NCBITaxon:502707 alt_id: NCBITaxon:502708 alt_id: NCBITaxon:502709 alt_id: NCBITaxon:502715 alt_id: NCBITaxon:502741 synonym: "Fusisporium avenaceum" RELATED synonym [] synonym: "Gibberella avenacea" RELATED synonym [] synonym: "Gibberella avenacea R.J. Cook, 1967" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:679429 ! Fusarium tricinctum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40263 name: Endothia gyrosa namespace: ncbi_taxonomy synonym: "Sphaeria gyrosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:73124 ! Endothia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40266 name: Cylindrocladium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40267 name: Calonectria pteridis namespace: ncbi_taxonomy synonym: "Cylindrocladium pteridis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2779501 ! Calonectria pteridis species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4027 name: Geraniaceae namespace: ncbi_taxonomy synonym: "geranium family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41943 ! Geraniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:402708 name: Sperata namespace: ncbi_taxonomy alt_id: NCBITaxon:209113 synonym: "Aorichthys" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:31013 ! Bagridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40276 name: Trichovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1914298 ! Trivirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40296 name: Penicillium italicum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4030 name: Pelargonium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4027 ! Geraniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4036 name: Apiales namespace: ncbi_taxonomy synonym: "Araliales" RELATED synonym [] xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:91882 ! campanulids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:403667 name: Vitales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:91834 ! rosids incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:403677 name: Phytophthora infestans T30-4 namespace: ncbi_taxonomy synonym: "Phytophthora infestans strain T30-4" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4787 ! Phytophthora infestans property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:4037 name: Apiaceae namespace: ncbi_taxonomy synonym: "carrot family" EXACT common_name [] synonym: "Umbelliferae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:364270 ! Apiineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40374 name: Scopulariopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5593 ! Microascaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40376 name: Scopulariopsis brumptii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40374 ! Scopulariopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4038 name: Daucus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:241799 ! Daucinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4039 name: Daucus carota namespace: ncbi_taxonomy synonym: "carrot" EXACT genbank_common_name [] synonym: "carrots" EXACT common_name [] synonym: "Queen Anne's lace" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1873447 ! Daucus sect. Daucus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40415 name: Antrodia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1769247 ! Fomitopsidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40420 name: Bondarzewiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452342 ! Russulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40424 name: Hymenochaetaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:139380 ! Hymenochaetales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40427 name: Ceriporia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1931355 ! Irpicaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40430 name: Cryptoporus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40431 name: Cryptoporus volvatus namespace: ncbi_taxonomy synonym: "Polyporus volvatus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40430 ! Cryptoporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40432 name: Daedaleopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40433 name: Daedaleopsis confragosa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40432 ! Daedaleopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40438 name: Echinodontiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452342 ! Russulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40439 name: Echinodontium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40438 ! Echinodontiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4044 name: Apium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:241793 ! Apieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40440 name: Echinodontium tinctorium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40439 ! Echinodontium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40441 name: Fomes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40442 name: Fomes fomentarius namespace: ncbi_taxonomy synonym: "Boletus fomentarius" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40441 ! Fomes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40443 name: Gloeophyllum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452340 ! Gloeophyllaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40444 name: Gloeophyllum sepiarium namespace: ncbi_taxonomy synonym: "Agaricus sepiarius" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40443 ! Gloeophyllum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4045 name: Apium graveolens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4044 ! Apium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40451 name: Trichaptum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:227323 ! Hymenochaetales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40452 name: Trichaptum abietinum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40451 ! Trichaptum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40458 name: Hericiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452342 ! Russulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40459 name: Hericium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40458 ! Hericiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40463 name: Peniophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:103393 ! Peniophoraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40468 name: Inonotus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40424 ! Hymenochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40469 name: Inonotus hispidus namespace: ncbi_taxonomy synonym: "Boletus hispidus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40468 ! Inonotus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40470 name: Phellinus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40424 ! Hymenochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40471 name: Fuscoporia gilva namespace: ncbi_taxonomy synonym: "Boletus gilvus" RELATED synonym [] synonym: "Phellinus gilvus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:175855 ! Fuscoporia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40472 name: Phellinus igniarius namespace: ncbi_taxonomy alt_id: NCBITaxon:1349030 synonym: "Boletus igniarius" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40470 ! Phellinus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40475 name: Phaeolus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2983429 ! Phaeolaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40476 name: Phaeolus schweinitzii namespace: ncbi_taxonomy synonym: "Polyporus schweinitzii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40475 ! Phaeolus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40483 name: Fomitopsis pinicola namespace: ncbi_taxonomy alt_id: NCBITaxon:178456 synonym: "Boletus pinicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34474 ! Fomitopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40492 name: Stereum hirsutum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5644 ! Stereum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4055 name: Gentianales namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:12144762 xref: PMID:34254285 is_a: NCBITaxon:91888 ! lamiids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:40551 name: Arecales namespace: ncbi_taxonomy alt_id: NCBITaxon:4709 synonym: "Areciflorae" RELATED in_part [] xref: GC_ID:1 xref: PMID:26350789 is_a: NCBITaxon:4734 ! commelinids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:40552 name: Asparagaceae namespace: ncbi_taxonomy synonym: "asparagus family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:73496 ! Asparagales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40553 name: Allioideae namespace: ncbi_taxonomy synonym: "Alliaceae" RELATED synonym [] synonym: "onion famly" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4668 ! Amaryllidaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:40558 name: Botryotinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40559 name: Botrytis cinerea namespace: ncbi_taxonomy alt_id: NCBITaxon:1138823 alt_id: NCBITaxon:1138824 alt_id: NCBITaxon:1671128 synonym: "Botryotinia fuckeliana" RELATED synonym [] synonym: "Sclerotinia fuckeliana" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33196 ! Botrytis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40562 name: Strophariaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2982305 ! Agaricineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40568 name: Campanula namespace: ncbi_taxonomy alt_id: NCBITaxon:239429 alt_id: NCBITaxon:239437 alt_id: NCBITaxon:239442 synonym: "Campanulastrum" RELATED synonym [] synonym: "Campanulastrum Small, 1903" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4381 ! Campanulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40607 name: Nectria pseudotrichia namespace: ncbi_taxonomy alt_id: NCBITaxon:2717538 synonym: "Murinectria pseudotrichia" EXACT equivalent_name [] synonym: "Tubercularia lateritia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5133 ! Nectria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40615 name: Melanospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:72984 ! Ceratostomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40623 name: Calonectria kyotensis namespace: ncbi_taxonomy alt_id: NCBITaxon:2728088 synonym: "Calonectra uniseptata" RELATED synonym [] synonym: "Calonectria floridana" RELATED synonym [] synonym: "Cylindrocladium floridanum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2779503 ! Calonectria kyotensis species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40624 name: Calonectria cylindrospora namespace: ncbi_taxonomy synonym: "Calonectria morganii" RELATED synonym [] synonym: "Cylindrocladium scoparium" RELATED synonym [] synonym: "Diplocladium cylindrosporum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2779495 ! Calonectria cylindrospora species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40640 name: Potato virus V namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40657 name: Plectosphaerella namespace: ncbi_taxonomy synonym: "Plectosporium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1033978 ! Plectosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:40658 name: Plectosphaerella cucumerina namespace: ncbi_taxonomy synonym: "Fusarium tabacinum" RELATED synonym [] synonym: "Microdochium tabacinum" RELATED synonym [] synonym: "Monographella cucumerina" RELATED synonym [] synonym: "Plectosporium tabacinum" RELATED synonym [] synonym: "Venturia cucumerina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40657 ! Plectosphaerella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40674 name: Mammalia namespace: ncbi_taxonomy synonym: "mammals" EXACT genbank_common_name [] synonym: "mammals" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:32524 ! Amniota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:4069 name: Solanales namespace: ncbi_taxonomy alt_id: NCBITaxon:41936 synonym: "Solananae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:91888 ! lamiids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:4070 name: Solanaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:40319 synonym: "nightshade family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4069 ! Solanales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4071 name: Capsicum namespace: ncbi_taxonomy synonym: "peppers" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:424564 ! Capsiceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:407262 name: Apiognomonia veneta namespace: ncbi_taxonomy synonym: "Diaporthe veneta" RELATED synonym [] synonym: "Laestadia veneta" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:148322 ! Apiognomonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:407951 name: Neofusicoccum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4081 name: Solanum lycopersicum namespace: ncbi_taxonomy alt_id: NCBITaxon:195582 synonym: "Lycopersicon esculentum" RELATED synonym [] synonym: "Lycopersicon esculentum var. esculentum" RELATED synonym [] synonym: "Solanum esculentum" RELATED synonym [] synonym: "Solanum lycopersicum var. humboldtii" RELATED synonym [] synonym: "tomato" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:49274 ! Solanum subgen. Lycopersicon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4085 name: Nicotiana namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:424562 ! Nicotianeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:409189 name: Diapheromeridae namespace: ncbi_taxonomy alt_id: NCBITaxon:262165 xref: GC_ID:1 is_a: NCBITaxon:523720 ! Anareolatae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:409223 name: Cordana namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:252199 ! Sordariomycetidae incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:409281 name: unclassified Allium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4678 ! Allium [Term] id: NCBITaxon:409282 name: Allium fistulosum/Allium cepa monosomic addition line namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:409281 ! unclassified Allium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:409481 name: Aphelenchoides ritzemabosi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:90723 ! Aphelenchoides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4097 name: Nicotiana tabacum namespace: ncbi_taxonomy synonym: "American tobacco" EXACT common_name [] synonym: "common tobacco" EXACT genbank_common_name [] synonym: "tobacco" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4085 ! Nicotiana property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40979 name: Cocksfoot mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12137 ! Sobemovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:40995 name: Elsinoaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:280978 xref: GC_ID:1 is_a: NCBITaxon:45676 ! Myriangiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:40996 name: Elsinoe namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:28373739 is_a: NCBITaxon:40995 ! Elsinoaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4101 name: Petunia namespace: ncbi_taxonomy synonym: "petunia" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:424555 ! Petunioideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:410612 name: Fuligo leviderma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159719 ! Fuligo property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4107 name: Solanum namespace: ncbi_taxonomy alt_id: NCBITaxon:4080 alt_id: NCBITaxon:49275 xref: GC_ID:1 is_a: NCBITaxon:424574 ! Solaneae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4113 name: Solanum tuberosum namespace: ncbi_taxonomy alt_id: NCBITaxon:90692 synonym: "potato" EXACT genbank_common_name [] synonym: "potatoes" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4107 ! Solanum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4118 name: Convolvulaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:41802 synonym: "morning-glory family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4069 ! Solanales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4119 name: Ipomoea namespace: ncbi_taxonomy synonym: "Pharbitis" RELATED synonym [] xref: GC_ID:1 xref: PMID:31712754 is_a: NCBITaxon:267213 ! Ipomoeeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:41191 name: Glossata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7088 ! Lepidoptera property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:41196 name: Neolepidoptera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41191 ! Glossata property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:41197 name: Heteroneura namespace: ncbi_taxonomy alt_id: NCBITaxon:37583 xref: GC_ID:1 is_a: NCBITaxon:41196 ! Neolepidoptera property_value: has_rank NCBITaxon:parvorder [Term] id: NCBITaxon:4120 name: Ipomoea batatas namespace: ncbi_taxonomy synonym: "batate" EXACT common_name [] synonym: "Ipomoea batatas var. edulis" RELATED synonym [] synonym: "Ipomoea tiliacea auct. non (Willd.) Choisy" RELATED synonym [] synonym: "sweet potato" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4119 ! Ipomoea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:41247 name: Mycena namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:2024004 ! Mycenaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:412481 name: Asteromella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:412494 name: Idriella namespace: ncbi_taxonomy alt_id: NCBITaxon:1682407 xref: GC_ID:1 is_a: NCBITaxon:1682405 ! Microdochiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:41254 name: Mycosphaerella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4128 name: Cuscuta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:292919 ! Cuscuteae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:41297 name: Sphingomonadaceae namespace: ncbi_taxonomy synonym: "alpha-4 proteobacteria" RELATED synonym [] synonym: "Sphingomonas group" RELATED synonym [] synonym: "Zymomonas group" RELATED synonym [] xref: GC_ID:11 xref: PMID:10981829 is_a: NCBITaxon:204457 ! Sphingomonadales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4136 name: Lamiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:41379 synonym: "Labiatae" RELATED synonym [] synonym: "mint family" EXACT common_name [] xref: GC_ID:1 xref: PMID:33419433 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:413616 name: Puccinia calcitrapae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:413641 name: Uromyces trifolii-repentis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5263 ! Uromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:413970 name: Anulavirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39740 ! Bromoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:41399 name: Phrymaceae namespace: ncbi_taxonomy synonym: "Phrymataceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:41413 name: Aspergillus glaucus namespace: ncbi_taxonomy alt_id: NCBITaxon:1563338 alt_id: NCBITaxon:40379 synonym: "Aspergillus herbariorum" RELATED synonym [] synonym: "Eurotium herbariorum" RELATED synonym [] synonym: "Mucor glaucus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2720874 ! Aspergillus subgen. Aspergillus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4143 name: Lamiales namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:91888 ! lamiids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41455 name: Polymyxa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37358 ! Plasmodiophoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:41456 name: Polymyxa betae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41455 ! Polymyxa property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:414582 name: Diplodina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:218102 ! Gnomoniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:41459 name: Sweet potato mild mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:137757 ! Ipomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:41479 name: Aster namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2841720 ! Asterinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4149 name: Scrophulariaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:34271 alt_id: NCBITaxon:4175 alt_id: NCBITaxon:57114 alt_id: NCBITaxon:69064 synonym: "figwort family" EXACT common_name [] xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4154 name: Mimulus namespace: ncbi_taxonomy synonym: "Mimulus" EXACT scientific_name [] synonym: "monkey flowers" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:41399 ! Phrymaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:415593 name: Venturia pyrina namespace: ncbi_taxonomy alt_id: NCBITaxon:86260 synonym: "Venturia pirina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5024 ! Venturia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:41562 name: Dahlia namespace: ncbi_taxonomy synonym: "Dahlia" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:219134 ! Coreopsideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:415853 name: Northern Aplomado falcon adenovirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:692069 ! Falcon aviadenovirus A [Term] id: NCBITaxon:41665 name: Neopterygii namespace: ncbi_taxonomy synonym: "Neopterygi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:186623 ! Actinopteri property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:4169 name: Striga namespace: ncbi_taxonomy synonym: "witchweeds" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:216769 ! Buchnereae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4170 name: Striga asiatica namespace: ncbi_taxonomy synonym: "witchweed" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4169 ! Striga property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:41712 name: Osteoglossiformes namespace: ncbi_taxonomy synonym: "bonytongues" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:31089 ! Osteoglossomorpha property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41763 name: Agropyron mosaic virus namespace: ncbi_taxonomy synonym: "AgMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:39730 ! Rymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:41764 name: Hordeum mosaic virus namespace: ncbi_taxonomy synonym: "HoMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:39730 ! Rymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:41768 name: Ranunculales namespace: ncbi_taxonomy alt_id: NCBITaxon:3439 xref: GC_ID:1 xref: PMID:26724406 is_a: NCBITaxon:1437183 ! Mesangiospermae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:417896 name: Roesleria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159639 ! Helotiales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:417897 name: Roesleria subterranea namespace: ncbi_taxonomy synonym: "Pilacre subterranea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:417896 ! Roesleria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:41803 name: Cuscuta europaea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824621 ! Cuscuta subgen. Cuscuta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:418125 name: Curvularia eragrostidis namespace: ncbi_taxonomy alt_id: NCBITaxon:131382 synonym: "Brachysporium eragrostidis" RELATED synonym [] synonym: "Cochliobolus eragrostidis" RELATED synonym [] synonym: "Pseudocochliobolus eragrostidis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4185 name: Acanthaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:41376 xref: GC_ID:1 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:41934 name: Cornales namespace: ncbi_taxonomy alt_id: NCBITaxon:41941 alt_id: NCBITaxon:42222 alt_id: NCBITaxon:4279 xref: GC_ID:1 xref: PMID:12144762 xref: PMID:21300164 xref: PMID:34263456 is_a: NCBITaxon:71274 ! asterids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41937 name: Sapindales namespace: ncbi_taxonomy alt_id: NCBITaxon:4010 synonym: "Rutanae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:91836 ! malvids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41938 name: Malvales namespace: ncbi_taxonomy alt_id: NCBITaxon:3628 synonym: "Malvanae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:91836 ! malvids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41943 name: Geraniales namespace: ncbi_taxonomy alt_id: NCBITaxon:4017 synonym: "Geranianae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:91836 ! malvids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41944 name: Myrtales namespace: ncbi_taxonomy alt_id: NCBITaxon:3927 synonym: "Myrtanae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:91836 ! malvids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41945 name: Ericales namespace: ncbi_taxonomy alt_id: NCBITaxon:125051 alt_id: NCBITaxon:3622 alt_id: NCBITaxon:3736 alt_id: NCBITaxon:4334 alt_id: NCBITaxon:4338 xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:71274 ! asterids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41946 name: Saxifragales namespace: ncbi_taxonomy alt_id: NCBITaxon:4393 synonym: "Hamamelidales" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:1437201 ! Pentapetalae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:41947 name: Santalales namespace: ncbi_taxonomy alt_id: NCBITaxon:3957 synonym: "Santalanae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1437201 ! Pentapetalae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:42004 name: Leek yellow stripe virus namespace: ncbi_taxonomy synonym: "Leek yellow stripe potyvirus" EXACT equivalent_name [] synonym: "LYSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:420778 name: Diplodia seriata namespace: ncbi_taxonomy alt_id: NCBITaxon:66732 synonym: "Botryosphaeria obtusa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:66735 ! Diplodia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4209 name: Asterales namespace: ncbi_taxonomy alt_id: NCBITaxon:4380 xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:91882 ! campanulids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:4210 name: Asteraceae namespace: ncbi_taxonomy synonym: "Compositae" EXACT equivalent_name [] synonym: "daisy family" EXACT common_name [] xref: GC_ID:1 xref: PMID:18375151 is_a: NCBITaxon:4209 ! Asterales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:421394 name: Stigmina namespace: ncbi_taxonomy synonym: "Stigmina" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:302062 ! Pemphredonini property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:4221 name: Carthamus namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:31059792 is_a: NCBITaxon:742011 ! Centaureinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4222 name: Carthamus tinctorius namespace: ncbi_taxonomy synonym: "safflower" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4221 ! Carthamus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42229 name: Prunus avium namespace: ncbi_taxonomy synonym: "Cerasus avium" RELATED synonym [] synonym: "gean" EXACT common_name [] synonym: "mazzard" EXACT common_name [] synonym: "Prunus cerasus var. avium" RELATED synonym [] synonym: "sweet cherry" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:3754 ! Prunus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42234 name: Streptomyces acidiscabies namespace: ncbi_taxonomy synonym: "Streptomyces acidiscabiei" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:21112986 xref: PMID:36322614 is_a: NCBITaxon:1883 ! Streptomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42289 name: Papilioninae namespace: ncbi_taxonomy alt_id: NCBITaxon:76255 synonym: "swallowtails" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:7143 ! Papilionidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:42308 name: Hypoxylon namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2033035 ! Hypoxylaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4231 name: Helianthus namespace: ncbi_taxonomy alt_id: NCBITaxon:36497 synonym: "sunflowers" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:102814 ! Heliantheae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4232 name: Helianthus annuus namespace: ncbi_taxonomy synonym: "common sunflower" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4231 ! Helianthus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4233 name: Helianthus tuberosus namespace: ncbi_taxonomy synonym: "Jerusalem artichoke" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4231 ! Helianthus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42345 name: Phoenix dactylifera namespace: ncbi_taxonomy synonym: "date palm" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4719 ! Phoenix property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4235 name: Lactuca namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:745062 ! Lactucinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4236 name: Lactuca sativa namespace: ncbi_taxonomy synonym: "cultivated lettuce" EXACT common_name [] synonym: "garden lettuce" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4235 ! Lactuca property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42364 name: Diatrypaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:531861 xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:42426 name: Meloidogyne artiellia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42452 name: unclassified eukaryotes namespace: ncbi_taxonomy alt_id: NCBITaxon:1126367 synonym: "unclassified Eukaryota" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2759 ! Eukaryota [Term] id: NCBITaxon:424551 name: Solanoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4070 ! Solanaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:424552 name: Cestroideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4070 ! Solanaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:424554 name: Nicotianoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4070 ! Solanaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:424555 name: Petunioideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4070 ! Solanaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:424556 name: Schizanthoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4070 ! Solanaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:424558 name: Browallieae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:424552 ! Cestroideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:424562 name: Nicotianeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:424554 ! Nicotianoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:424564 name: Capsiceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:424551 ! Solanoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:424574 name: Solaneae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:424551 ! Solanoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:42475 name: Rice ragged stunt virus namespace: ncbi_taxonomy synonym: "rice ragged stunt oryzavirus" EXACT equivalent_name [] synonym: "RRSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10992 ! Oryzavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42580 name: Rhaphiodontinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7992 ! Characidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:426501 name: Phyllocoptinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70320 ! Eriophyidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:426517 name: Phyllocoptini namespace: ncbi_taxonomy synonym: "Criotacinae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:426501 ! Phyllocoptinae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:42676 name: Fusarium sacchari namespace: ncbi_taxonomy alt_id: NCBITaxon:186439 alt_id: NCBITaxon:2773097 alt_id: NCBITaxon:48494 synonym: "Cephalosporium sacchari" RELATED synonym [] synonym: "Fusarium neoceras" RELATED synonym [] synonym: "Gibberella sacchari" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:42677 name: Fusarium subglutinans namespace: ncbi_taxonomy alt_id: NCBITaxon:142643 alt_id: NCBITaxon:509225 synonym: "Fusarium fujikuroi var. subglutinans" RELATED synonym [] synonym: "Fusarium moniliforme var. subglutinans" RELATED synonym [] synonym: "Gibberella fujikuroi var. subglutinans" RELATED synonym [] synonym: "Gibberella subglutinans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:428391 name: Asteridiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:66276 ! Meliolaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:43049 name: Tilletia indica namespace: ncbi_taxonomy synonym: "Karnal bunt" EXACT common_name [] synonym: "Neovossia indica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:13289 ! Tilletia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:430997 name: Torula namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1667020 ! Torulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:43130 name: Onion yellow dwarf virus namespace: ncbi_taxonomy synonym: "onion yellow dwarf potyvirus" EXACT equivalent_name [] synonym: "OYDV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:431595 name: Globisporangium ultimum DAOM BR144 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2052682 ! Globisporangium ultimum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:432027 name: Helicobasidiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162484 ! Pucciniomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:43215 name: Ramularia endophylla namespace: ncbi_taxonomy synonym: "Sphaeria punctiformis" RELATED synonym [] synonym: "Sphaeria punctiformis Pers., 1794" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:112497 ! Ramularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:43219 name: Herpotrichiellaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:82104 xref: GC_ID:1 is_a: NCBITaxon:34395 ! Chaetothyriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:43240 name: Bean common mosaic necrosis virus namespace: ncbi_taxonomy synonym: "BCMNV" BROAD acronym [] synonym: "serotype A of BCMV" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:433357 name: Bidens mottle virus namespace: ncbi_taxonomy alt_id: NCBITaxon:213033 synonym: "Sunflower chlorotic spot virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4335 name: Primulaceae namespace: ncbi_taxonomy synonym: "primrose family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41945 ! Ericales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:43353 name: Xanthomonas phaseoli pv. manihotis namespace: ncbi_taxonomy synonym: "Xanthomonas axonopodis pv. manihotis" RELATED synonym [] synonym: "Xanthomonas campestris pv. manihotis" RELATED synonym [] synonym: "Xanthomonas manihotis" RELATED synonym [] xref: GC_ID:11 xref: PMID:21018684 is_a: NCBITaxon:1985254 ! Xanthomonas phaseoli [Term] id: NCBITaxon:4345 name: Ericaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:16487 alt_id: NCBITaxon:16613 alt_id: NCBITaxon:4342 alt_id: NCBITaxon:71242 synonym: "heath family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:41945 ! Ericales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4346 name: Rhododendron namespace: ncbi_taxonomy alt_id: NCBITaxon:46248 alt_id: NCBITaxon:49604 synonym: "Tsusiophyllum" RELATED synonym [] xref: GC_ID:1 xref: PMID:20193767 is_a: NCBITaxon:217046 ! Rhodoreae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:435161 name: Lepturacanthus savala namespace: ncbi_taxonomy synonym: "Savalani hairtail" EXACT genbank_common_name [] synonym: "Trichiurus savala" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:255300 ! Lepturacanthus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:436486 name: Dinosauria namespace: ncbi_taxonomy synonym: "dinosaur" EXACT common_name [] synonym: "dinosaurs" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:8492 ! Archosauria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:436489 name: Saurischia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:436486 ! Dinosauria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:436491 name: Theropoda namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:436489 ! Saurischia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:436492 name: Coelurosauria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:436491 ! Theropoda property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:437236 name: Cuscuta tinctoria aff. var. floribunda King & Soderstrom 5053 namespace: ncbi_taxonomy synonym: "Cuscuta aff. floribunda King & Soderstrom 5053" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:437309 ! Cuscuta tinctoria property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:437267 name: Cuscuta hyalina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824899 ! Cuscuta sect. Umbellatae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:437309 name: Cuscuta tinctoria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824908 ! Cuscuta sect. Lobostigmae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4381 name: Campanulaceae namespace: ncbi_taxonomy synonym: "bellflower family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4209 ! Asterales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:438341 name: Cercospora capsici namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:438383 name: Septoria campanulae namespace: ncbi_taxonomy synonym: "Ascospora campanulae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:39702 ! Septoria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4398 name: Liquidambar namespace: ncbi_taxonomy synonym: "sweet gum trees" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:91829 ! Altingiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:43987 name: Geotrichum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34353 ! Dipodascaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4401 name: Platanaceae namespace: ncbi_taxonomy synonym: "plane-tree family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:232378 ! Proteales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4402 name: Platanus namespace: ncbi_taxonomy synonym: "plane trees" EXACT common_name [] synonym: "sycamores" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4401 ! Platanaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:441973 name: Phialophora sp. kz41 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2918375 ! unclassified Phialophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4441 name: Camellia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:27065 ! Theaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4442 name: Camellia sinensis namespace: ncbi_taxonomy alt_id: NCBITaxon:238974 synonym: "black tea" EXACT common_name [] synonym: "Thea sinensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4441 ! Camellia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4447 name: Liliopsida namespace: ncbi_taxonomy synonym: "monocots" EXACT common_name [] synonym: "monocots" RELATED blast_name [] synonym: "Monocotyledoneae" RELATED synonym [] synonym: "monocotyledons" EXACT genbank_common_name [] xref: GC_ID:1 xref: PMID:25249442 is_a: NCBITaxon:1437183 ! Mesangiospermae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:44643 name: Rhizinaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:442000 xref: GC_ID:1 is_a: NCBITaxon:5185 ! Pezizales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:44644 name: Rhizina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:44643 ! Rhizinaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:44645 name: Rhizina undulata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:44644 ! Rhizina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:446925 name: Cylindrosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:159639 ! Helotiales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:446931 name: Gloeosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:205932 ! Pezizomycotina incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:446948 name: Diplocarpon namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2793945 ! Drepanopezizaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:446949 name: Diplocarpon mespili namespace: ncbi_taxonomy synonym: "Entomosporium mespili" RELATED synonym [] synonym: "Entomosporium mespili (DC.) Sacc." RELATED synonym [] synonym: "Stigmatea mespili" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:446948 ! Diplocarpon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4479 name: Poaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1661618 synonym: "Bambusaceae" RELATED synonym [] synonym: "Gramineae" RELATED synonym [] synonym: "grass family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:38820 ! Poales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:448052 name: Cytospora terebinthi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:117544 ! Cytospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4496 name: Avena namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:640623 ! Aveninae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4498 name: Avena sativa namespace: ncbi_taxonomy synonym: "cultivated oat" EXACT common_name [] synonym: "cultivated oats" EXACT common_name [] synonym: "oats" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4496 ! Avena property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4501 name: Bromus namespace: ncbi_taxonomy alt_id: NCBITaxon:52136 synonym: "Anisantha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:147388 ! Bromeae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:450425 name: Fusarium incarnatum-equiseti species complex namespace: ncbi_taxonomy synonym: "FIESC" EXACT equivalent_name [] xref: GC_ID:1 xref: PMID:19828752 xref: PMID:23379853 xref: PMID:32214500 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:45049 name: Thripoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:38130 ! Terebrantia property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:45053 name: Thripidae namespace: ncbi_taxonomy synonym: "true thrips" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:45049 ! Thripoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4512 name: Hordeum namespace: ncbi_taxonomy synonym: "barleys" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1648017 ! Hordeinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4513 name: Hordeum vulgare namespace: ncbi_taxonomy alt_id: NCBITaxon:36528 synonym: "barley" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4512 ! Hordeum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45130 name: Bipolaris sorokiniana namespace: ncbi_taxonomy alt_id: NCBITaxon:74420 synonym: "Cochliobolus sativus" RELATED synonym [] synonym: "Helminthosporium sorokinianum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45131 name: Botryosphaeriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:66734 xref: GC_ID:1 is_a: NCBITaxon:451869 ! Botryosphaeriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:45132 name: Botryosphaeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:45133 name: Lasiodiplodia theobromae namespace: ncbi_taxonomy alt_id: NCBITaxon:1620406 alt_id: NCBITaxon:2906518 alt_id: NCBITaxon:502207 alt_id: NCBITaxon:66740 synonym: "Botryodiplodia theobromae" RELATED synonym [] synonym: "Botryosphaeria rhodina" RELATED synonym [] synonym: "Diplodia gossypina" RELATED synonym [] synonym: "Physalospora rhodina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:66739 ! Lasiodiplodia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45134 name: Neofusicoccum ribis namespace: ncbi_taxonomy alt_id: NCBITaxon:528155 synonym: "anamorph of Botryosphaeria ribis" RELATED synonym [] synonym: "Botryosphaeria ribis" RELATED synonym [] synonym: "Fusicoccum ribis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:407951 ! Neofusicoccum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:451435 name: Chytridiomycetes namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:12684019 xref: PMID:17051209 xref: PMID:17486963 is_a: NCBITaxon:2683659 ! Chytridiomycota incertae sedis property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:451442 name: Rhizophydiales namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:16919432 xref: PMID:17051209 is_a: NCBITaxon:451435 ! Chytridiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:451449 name: Rhizophydiaceae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:16919432 is_a: NCBITaxon:451442 ! Rhizophydiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:451459 name: Blastocladiomycota namespace: ncbi_taxonomy synonym: "Allomycota" RELATED synonym [] xref: GC_ID:1 xref: PMID:17010206 xref: PMID:17486963 is_a: NCBITaxon:112252 ! Fungi incertae sedis property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:451460 name: Blastocladiomycetes namespace: ncbi_taxonomy synonym: "Allomycetes" RELATED synonym [] synonym: "blastocladiomycetes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:17010206 xref: PMID:17486963 is_a: NCBITaxon:2683660 ! Blastocladiomycota incertae sedis property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:451507 name: Mucoromycotina namespace: ncbi_taxonomy synonym: "Zygomycota" RELATED in_part [] xref: GC_ID:1 xref: PMID:14715234 xref: PMID:17010206 xref: PMID:17051209 xref: PMID:17572334 xref: PMID:27738200 is_a: NCBITaxon:1913637 ! Mucoromycota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:45151 name: Pyrenophora tritici-repentis namespace: ncbi_taxonomy alt_id: NCBITaxon:132100 alt_id: NCBITaxon:469969 alt_id: NCBITaxon:475175 synonym: "Drechslera tritici-repentis" RELATED synonym [] synonym: "Helminthosporium tritici-repentis" RELATED synonym [] synonym: "Pleospora tritici-repentis" RELATED synonym [] synonym: "Pyrenophora triticirepentis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5027 ! Pyrenophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:451864 name: Dikarya namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:15689432 xref: PMID:16151185 xref: PMID:17010206 xref: PMID:17051209 xref: PMID:17572334 is_a: NCBITaxon:4751 ! Fungi property_value: has_rank NCBITaxon:subkingdom [Term] id: NCBITaxon:451866 name: Taphrinomycotina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4890 ! Ascomycota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:451867 name: Dothideomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:17486979 is_a: NCBITaxon:147541 ! Dothideomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:451868 name: Pleosporomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:17486979 is_a: NCBITaxon:147541 ! Dothideomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:451869 name: Botryosphaeriales namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:17486979 is_a: NCBITaxon:159987 ! Dothideomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:451870 name: Chaetothyriomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147545 ! Eurotiomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:451871 name: Eurotiomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147545 ! Eurotiomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:45214 name: Phragmidiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:45215 name: Gymnoconia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45214 ! Phragmidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:45216 name: Gymnoconia nitens namespace: ncbi_taxonomy synonym: "Aecidium nitens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:45215 ! Gymnoconia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45217 name: Gymnosporangium clavipes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5265 ! Gymnosporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:452283 name: Exobasidiomycetes namespace: ncbi_taxonomy alt_id: NCBITaxon:62908 synonym: "Exobasidiomycetidae" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:452284 ! Ustilaginomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:452284 name: Ustilaginomycotina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5204 ! Basidiomycota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:452333 name: Agaricomycetidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:155619 ! Agaricomycetes property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:452334 name: Atheliales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452333 ! Agaricomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:452338 name: Corticiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:355688 ! Agaricomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:452339 name: Gloeophyllales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:355688 ! Agaricomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:45234 name: Cordyceps namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:474943 ! Cordycipitaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:452340 name: Gloeophyllaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452339 ! Gloeophyllales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:452342 name: Russulales namespace: ncbi_taxonomy alt_id: NCBITaxon:68796 alt_id: NCBITaxon:68799 synonym: "Hericiales" RELATED synonym [] synonym: "Stereales" RELATED synonym [] xref: GC_ID:1 xref: PMID:17572334 is_a: NCBITaxon:355688 ! Agaricomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:452343 name: Trechisporales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:355688 ! Agaricomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:452563 name: Cladosporiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:452564 synonym: "Davidiellaceae" RELATED synonym [] xref: GC_ID:1 xref: PMID:17486979 is_a: NCBITaxon:2726946 ! Cladosporiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4527 name: Oryza namespace: ncbi_taxonomy alt_id: NCBITaxon:77587 xref: GC_ID:1 is_a: NCBITaxon:1648021 ! Oryzinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:45294 name: Ophiobolus namespace: ncbi_taxonomy alt_id: NCBITaxon:1778783 synonym: "Premilcurensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5020 ! Phaeosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:45299 name: Clathrospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:221669 ! Diademaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4530 name: Oryza sativa namespace: ncbi_taxonomy alt_id: NCBITaxon:389215 synonym: "Asian cultivated rice" EXACT genbank_common_name [] synonym: "red rice" EXACT common_name [] synonym: "rice" EXACT common_name [] xref: GC_ID:1 xref: PMID:15654106 xref: PMID:17617555 xref: PMID:17907810 xref: PMID:19706531 is_a: NCBITaxon:4527 ! Oryza property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45306 name: Elsinoe veneta namespace: ncbi_taxonomy synonym: "Plectodiscella veneta" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40996 ! Elsinoe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:453155 name: Hyaloperonospora parasitica species group namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:184462 ! Hyaloperonospora property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:45339 name: Kalanchoe blossfeldiana namespace: ncbi_taxonomy alt_id: NCBITaxon:84210 synonym: "Kalanchoe blossfeldiana Poelln., 1934" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:23012 ! Kalanchoe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4543 name: Cenchrus americanus namespace: ncbi_taxonomy alt_id: NCBITaxon:4542 synonym: "bulrush millet" EXACT common_name [] synonym: "cattail millet" EXACT common_name [] synonym: "pearl millet" EXACT common_name [] synonym: "Pennisetum americanum" RELATED synonym [] synonym: "Pennisetum glaucum" RELATED synonym [] synonym: "Pennisetum typhoides" RELATED synonym [] synonym: "Pennisetum typhoideum" RELATED synonym [] synonym: "Setaria glauca" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4583 ! Cenchrus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4546 name: Saccharum namespace: ncbi_taxonomy alt_id: NCBITaxon:154762 alt_id: NCBITaxon:1709385 alt_id: NCBITaxon:50345 alt_id: NCBITaxon:66026 synonym: "Erianthus" RELATED synonym [] synonym: "Narenga" RELATED synonym [] xref: GC_ID:1 xref: PMID:25667078 is_a: NCBITaxon:1648026 ! Saccharinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4549 name: Secale namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1648017 ! Hordeinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4550 name: Secale cereale namespace: ncbi_taxonomy alt_id: NCBITaxon:155092 synonym: "rye" EXACT genbank_common_name [] synonym: "Secale cereale subsp. cereale" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4549 ! Secale property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4557 name: Sorghum namespace: ncbi_taxonomy alt_id: NCBITaxon:1699109 synonym: "Hemisorghum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1648028 ! Sorghinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4558 name: Sorghum bicolor namespace: ncbi_taxonomy synonym: "Andropogon sorghum" RELATED synonym [] synonym: "broomcorn" EXACT common_name [] synonym: "milo" EXACT common_name [] synonym: "sorghum" EXACT genbank_common_name [] synonym: "Sorghum bicolor subsp. bicolor" RELATED synonym [] synonym: "Sorghum nervosum" RELATED synonym [] synonym: "Sorghum saccharatum" RELATED synonym [] synonym: "Sorghum vulgare" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4557 ! Sorghum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4564 name: Triticum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1648030 ! Triticinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4565 name: Triticum aestivum namespace: ncbi_taxonomy alt_id: NCBITaxon:235075 alt_id: NCBITaxon:39424 synonym: "bread wheat" EXACT genbank_common_name [] synonym: "Canadian hard winter wheat" EXACT common_name [] synonym: "common wheat" EXACT common_name [] synonym: "Triticum aestivum subsp. aestivum" RELATED synonym [] synonym: "Triticum vulgare" RELATED synonym [] synonym: "wheat" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4564 ! Triticum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45676 name: Myriangiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451867 ! Dothideomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:456999 name: Rhizoctonia solani namespace: ncbi_taxonomy synonym: "Rhizoctonia praticola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1322061 ! Rhizoctonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4575 name: Zea namespace: ncbi_taxonomy synonym: "Euchlaena" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1648029 ! Tripsacinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4577 name: Zea mays namespace: ncbi_taxonomy alt_id: NCBITaxon:4578 synonym: "maize" EXACT common_name [] synonym: "Zea mays var. japonica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4575 ! Zea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4583 name: Cenchrus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1293361 ! Cenchrinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:45837 name: Solanum pseudocapsicum namespace: ncbi_taxonomy synonym: "Jerusalem cherry" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4107 ! Solanum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45926 name: Pratylenchidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:45927 name: Pratylenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46005 ! Pratylenchinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:45929 name: Pratylenchus penetrans namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:459305 name: Anemone mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:332470 ! unclassified Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45931 name: Pratylenchus vulnus namespace: ncbi_taxonomy synonym: "walnut meadow nematode" EXACT genbank_common_name [] synonym: "walnut root-lesion nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45934 name: Pratylenchus crenatus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45935 name: Pratylenchus thornei namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45936 name: Pratylenchus scribneri namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45937 name: Pratylenchus coffeae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:45938 name: Pratylenchus brachyurus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:46000 name: Dorylaimida namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1457286 ! Dorylaimia property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:46001 name: Longidoridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211224 ! Longidoroidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:46002 name: Xiphinema namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46001 ! Longidoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:46003 name: Xiphinema index namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46002 ! Xiphinema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:46005 name: Pratylenchinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45926 ! Pratylenchidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:46006 name: Nacobbinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45926 ! Pratylenchidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:46007 name: Nacobbus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46006 ! Nacobbinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:46008 name: Nacobbus aberrans namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46007 ! Nacobbus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:46009 name: Hirschmanniella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46005 ! Pratylenchinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:46011 name: Radopholus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:47473 ! Radopholinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:46012 name: Radopholus similis namespace: ncbi_taxonomy synonym: "banana-root nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:46011 ! Radopholus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:46022 name: Pratylenchus hexincisus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:46029 name: Striga gesnerioides namespace: ncbi_taxonomy alt_id: NCBITaxon:374733 synonym: "indigo witchweed" EXACT common_name [] synonym: "Striga orobanchoides" RELATED synonym [] synonym: "tobacco witchweed" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4169 ! Striga property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:460369 name: Phakopsora euvitis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:169998 ! Phakopsora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:46066 name: Phelipanche ramosa namespace: ncbi_taxonomy alt_id: NCBITaxon:362389 synonym: "Orobanche ramosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:320805 ! Phelipanche property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:46075 name: Artichoke Italian latent virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3047379 ! Nepovirus italiaense [Term] id: NCBITaxon:461148 name: Acrostalagmus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1033978 ! Plectosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4613 name: Bromeliaceae namespace: ncbi_taxonomy synonym: "bromeliad family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:38820 ! Poales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4614 name: Ananas namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1909378 ! Bromelioideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4615 name: Ananas comosus namespace: ncbi_taxonomy alt_id: NCBITaxon:1797123 synonym: "Ananas comosus var. comosus" RELATED synonym [] synonym: "Ananas lucidus" RELATED synonym [] synonym: "Bromelia comosa" RELATED synonym [] synonym: "pineapple" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4614 ! Ananas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4618 name: Zingiberales namespace: ncbi_taxonomy alt_id: NCBITaxon:40513 synonym: "Scitamineae" RELATED synonym [] synonym: "Zingiberiflorae" RELATED in_part [] xref: GC_ID:1 xref: PMID:26350789 is_a: NCBITaxon:4734 ! commelinids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:463686 name: Neofusicoccum mangiferae namespace: ncbi_taxonomy alt_id: NCBITaxon:2172587 alt_id: NCBITaxon:230090 synonym: "Dothiorella mangiferae" RELATED synonym [] synonym: "Fusicoccum mangiferae" RELATED synonym [] synonym: "Fusicoccum mangiferum" RELATED synonym [] synonym: "Nattrassia mangiferae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:407951 ! Neofusicoccum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4637 name: Musaceae namespace: ncbi_taxonomy synonym: "banana family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4618 ! Zingiberales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4640 name: Musa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4637 ! Musaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:464095 name: Picornavirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732506 ! Pisoniviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:4642 name: Zingiberaceae namespace: ncbi_taxonomy synonym: "ginger family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4618 ! Zingiberales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4668 name: Amaryllidaceae namespace: ncbi_taxonomy synonym: "amaryllis family" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:73496 ! Asparagales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:467161 name: Peronosclerospora sacchari namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:230838 ! Peronosclerospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:467175 name: Sclerophthora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:467176 name: Sclerophthora macrospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:467175 ! Sclerophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4678 name: Allium namespace: ncbi_taxonomy alt_id: NCBITaxon:51462 xref: GC_ID:1 is_a: NCBITaxon:703248 ! Allieae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4679 name: Allium cepa namespace: ncbi_taxonomy synonym: "onion" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4678 ! Allium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:467950 name: Hyphodermella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:396331 ! Phanerochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:467951 name: Hyphodermella corrugata namespace: ncbi_taxonomy synonym: "Grandinia corrugata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:467950 ! Hyphodermella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:467990 name: Capnodiales incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:470017 xref: GC_ID:1 is_a: NCBITaxon:134362 ! Capnodiales [Term] id: NCBITaxon:4682 name: Allium sativum namespace: ncbi_taxonomy synonym: "Allium longicuspis" RELATED synonym [] synonym: "garlic" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4678 ! Allium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4685 name: Asparagus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:703533 ! Asparagoideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4686 name: Asparagus officinalis namespace: ncbi_taxonomy synonym: "garden asparagus" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4685 ! Asparagus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:470077 name: Periconiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:470477 name: Polyscytalum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189359 ! Xylariales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4710 name: Arecaceae namespace: ncbi_taxonomy synonym: "palm family" EXACT common_name [] synonym: "Palmae" EXACT equivalent_name [] synonym: "palms" EXACT common_name [] xref: GC_ID:1 xref: PMID:26350789 is_a: NCBITaxon:40551 ! Arecales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4719 name: Phoenix namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:169748 ! Phoeniceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:47278 name: Trichothecium roseum namespace: ncbi_taxonomy synonym: "Trichoderma roseum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:231006 ! Trichothecium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:472988 name: Pileolaria terebinthi namespace: ncbi_taxonomy synonym: "Uredo terebinthi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:198673 ! Pileolaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4734 name: commelinids namespace: ncbi_taxonomy synonym: "Commelinidae" RELATED synonym [] synonym: "Commeliniflorae" RELATED synonym [] xref: GC_ID:1 xref: PMID:26350789 is_a: NCBITaxon:1437197 ! Petrosaviidae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:47424 name: Armillaria namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:862241 ! Physalacriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:47427 name: Armillaria gallica namespace: ncbi_taxonomy alt_id: NCBITaxon:566061 alt_id: NCBITaxon:64371 synonym: "Armillaria bulbosa" RELATED synonym [] synonym: "Armillaria lutea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:47424 ! Armillaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:47428 name: Armillaria ostoyae namespace: ncbi_taxonomy alt_id: NCBITaxon:139079 alt_id: NCBITaxon:181916 synonym: "Armillariella ostoyae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:47424 ! Armillaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:47429 name: Armillaria mellea namespace: ncbi_taxonomy alt_id: NCBITaxon:621134 synonym: "Agaricus melleus" RELATED synonym [] synonym: "Armillaria montagnei" RELATED synonym [] synonym: "Armillariella mellea" RELATED synonym [] synonym: "Clitocybe mellea" RELATED synonym [] synonym: "Lepiota mellea" RELATED synonym [] synonym: "Omphalia mellea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:47424 ! Armillaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:47431 name: Armillaria tabescens namespace: ncbi_taxonomy alt_id: NCBITaxon:245881 synonym: "Armillariella tabescens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:47424 ! Armillaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4747 name: Orchidaceae namespace: ncbi_taxonomy synonym: "orchid family" EXACT common_name [] xref: GC_ID:1 xref: PMID:20546585 is_a: NCBITaxon:73496 ! Asparagales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:47473 name: Radopholinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45926 ! Pratylenchidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:474922 name: Colletotrichum gloeosporioides namespace: ncbi_taxonomy alt_id: NCBITaxon:105394 alt_id: NCBITaxon:129313 alt_id: NCBITaxon:1470808 alt_id: NCBITaxon:1551510 alt_id: NCBITaxon:1551511 alt_id: NCBITaxon:1551512 alt_id: NCBITaxon:2082000 alt_id: NCBITaxon:2283415 alt_id: NCBITaxon:5457 synonym: "Colletotrichum gloeosporioides (Penz.) Penz. & Sacc., 1884" RELATED synonym [] synonym: "Glomerella cingulata" RELATED synonym [] synonym: "Glomerella rufomaculans-vaccinii" RELATED synonym [] synonym: "Gnomoniopsis cingulata" RELATED synonym [] synonym: "Vermicularia gloeosporioides" RELATED synonym [] xref: GC_ID:1 xref: PMID:23136459 is_a: NCBITaxon:2707338 ! Colletotrichum gloeosporioides species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:474943 name: Cordycipitaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:475074 xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4751 name: Fungi namespace: ncbi_taxonomy synonym: "fungi" RELATED in_part [] synonym: "fungi" RELATED blast_name [] synonym: "Mycota" RELATED synonym [] synonym: "Mycota" RELATED genbank_synonym [] xref: GC_ID:1 xref: PMID:11062127 xref: PMID:12684019 is_a: NCBITaxon:33154 ! Opisthokonta property_value: has_rank NCBITaxon:kingdom [Term] id: NCBITaxon:4761 name: Chytridiomycota namespace: ncbi_taxonomy alt_id: NCBITaxon:1400050 alt_id: NCBITaxon:4804 synonym: "chytrids" RELATED blast_name [] synonym: "Mastigomycotina" RELATED synonym [] synonym: "Monoblepharidomycota" RELATED synonym [] xref: GC_ID:1 xref: PMID:15689432 xref: PMID:17486963 xref: PMID:17572334 is_a: NCBITaxon:112252 ! Fungi incertae sedis property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:4762 name: Oomycota namespace: ncbi_taxonomy synonym: "Oomycetes" RELATED synonym [] synonym: "oomycetes" RELATED blast_name [] synonym: "Peronosporomycetes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33634 ! Stramenopiles property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:4763 name: Saprolegniales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4762 ! Oomycota property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:4764 name: Saprolegniaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4763 ! Saprolegniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4765 name: Achlya namespace: ncbi_taxonomy synonym: "Achlya" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:4764 ! Saprolegniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4767 name: Achlya klebsiana namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4765 ! Achlya property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4776 name: Peronosporales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4762 ! Oomycota property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:4777 name: Peronosporaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:162144 synonym: "downy mildews" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:4776 ! Peronosporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4778 name: Bremia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4779 name: Bremia lactucae namespace: ncbi_taxonomy synonym: "lettuce downy mildew" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4778 ! Bremia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4780 name: Plasmopara namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4781 name: Plasmopara halstedii namespace: ncbi_taxonomy synonym: "Peronospora halstedii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4780 ! Plasmopara property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4782 name: Pythiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:121069 ! Pythiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4783 name: Phytophthora namespace: ncbi_taxonomy alt_id: NCBITaxon:100869 xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:47834 name: Spiroplasma kunkelii namespace: ncbi_taxonomy xref: GC_ID:4 xref: PMID:16166721 is_a: NCBITaxon:2132 ! Spiroplasma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:47838 name: Chino del tomate virus namespace: ncbi_taxonomy alt_id: NCBITaxon:32609 synonym: "CdTV" BROAD acronym [] synonym: "Chino del tomate geminivirus" EXACT equivalent_name [] synonym: "Tomato leaf crumple geminivirus" EXACT equivalent_name [] synonym: "Tomato leaf crumple virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4784 name: Phytophthora capsici namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4785 name: Phytophthora cinnamomi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4786 name: Phytophthora cryptogea namespace: ncbi_taxonomy synonym: "Halophytophthora cryptogea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4787 name: Phytophthora infestans namespace: ncbi_taxonomy synonym: "Botrytis infestans" RELATED synonym [] synonym: "potato late blight" EXACT common_name [] synonym: "potato late blight agent" EXACT genbank_common_name [] synonym: "potato late blight fungus" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4788 name: Phytophthora megasperma namespace: ncbi_taxonomy synonym: "Phytophthora x megasperma" RELATED synonym [] synonym: "potato pink rot agent" EXACT common_name [] synonym: "potato pink rot fungus" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4790 name: Phytophthora nicotianae namespace: ncbi_taxonomy synonym: "buckeye rot agent" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:47900 name: Garlic common latent virus namespace: ncbi_taxonomy synonym: "GCLV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4792 name: Phytophthora parasitica namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4793 name: Phytophthora citrophthora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4794 name: Phytophthora drechsleri namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4795 name: Phytophthora megakarya namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4796 name: Phytophthora palmivora namespace: ncbi_taxonomy synonym: "Phytophthora palmovora" RELATED synonym [] synonym: "Pythium palmivorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4797 name: Pythium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4782 ! Pythiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4799 name: Pythium torulosum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4805 name: Blastocladiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451460 ! Blastocladiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:48095 name: Alternaria dauci namespace: ncbi_taxonomy synonym: "Alternaria brassicae var. dauci" RELATED synonym [] synonym: "Macrosporium dauci" RELATED synonym [] synonym: "Sporidesmium exitiosum var. dauci" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499262 ! Alternaria sect. Porri property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:48096 name: Alternaria dianthi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:48098 name: Alternaria porri namespace: ncbi_taxonomy alt_id: NCBITaxon:1245771 alt_id: NCBITaxon:1245773 alt_id: NCBITaxon:1245775 alt_id: NCBITaxon:1245776 alt_id: NCBITaxon:1245778 alt_id: NCBITaxon:1245779 alt_id: NCBITaxon:1245782 alt_id: NCBITaxon:1245783 alt_id: NCBITaxon:1245784 synonym: "Macrosporium porri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2499262 ! Alternaria sect. Porri property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4810 name: Chytridiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:451435 ! Chytridiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:48100 name: Alternaria solani namespace: ncbi_taxonomy synonym: "Alternaria viciae-fabae" RELATED synonym [] xref: GC_ID:1 xref: PMID:25492985 is_a: NCBITaxon:2499262 ! Alternaria sect. Porri property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4812 name: Chytridiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4810 ! Chytridiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:48120 name: Helicobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1670439 ! Helicobasidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4813 name: Chytridium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4812 ! Chytridiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4827 name: Mucorales namespace: ncbi_taxonomy synonym: "pin molds" EXACT genbank_common_name [] xref: GC_ID:1 xref: PMID:12684019 xref: PMID:14715234 xref: PMID:17051209 xref: PMID:17486964 xref: PMID:17572334 is_a: NCBITaxon:2212703 ! Mucoromycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:4830 name: Mucor namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34489 ! Mucoraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:483259 name: Phenacoccus manihoti namespace: ncbi_taxonomy synonym: "cassava mealybug" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:249510 ! Phenacoccus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4841 name: Mucor racemosus namespace: ncbi_taxonomy alt_id: NCBITaxon:463691 synonym: "Rhizomucor racemosus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4830 ! Mucor property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4842 name: Rhizopus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1344955 ! Rhizopodaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4846 name: Rhizopus stolonifer namespace: ncbi_taxonomy synonym: "Mucor stolonifer" RELATED synonym [] synonym: "Rhizopus nigricans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4842 ! Rhizopus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:48507 name: Fusarium denticulatum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4851 name: Cunninghamellaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4827 ! Mucorales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:4852 name: Cunninghamella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4851 ! Cunninghamellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:485396 name: Musa ABBB Group namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:89151 ! Musa x paradisiaca property_value: has_rank NCBITaxon:genotype [Term] id: NCBITaxon:48557 name: Aphyllon ludovicianum namespace: ncbi_taxonomy synonym: "Orobanche ludoviciana" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2249430 ! Aphyllon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:48558 name: Pyricularia namespace: ncbi_taxonomy alt_id: NCBITaxon:5137 xref: GC_ID:1 is_a: NCBITaxon:2528436 ! Pyriculariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:48696 name: Bipolaris sacchari namespace: ncbi_taxonomy synonym: "Cercospora sacchari" RELATED synonym [] synonym: "Drechslera sacchari" RELATED synonym [] synonym: "Helminthosporium sacchari" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:48736 name: Ralstonia namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:8657018 is_a: NCBITaxon:119060 ! Burkholderiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:487613 name: Cymadothea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:487614 name: Cymadothea trifolii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:487613 ! Cymadothea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:487631 name: Neoascochyta exitialis namespace: ncbi_taxonomy synonym: "Didymella exitialis" RELATED synonym [] synonym: "Sphaerella exitialis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1770170 ! Neoascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:487649 name: Asteroma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147551 ! Sordariomycetes incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:487867 name: Xanthomonas arboricola pv. guizotiae namespace: ncbi_taxonomy synonym: "Xanthomonas campestris pv. guizotiae" RELATED synonym [] xref: GC_ID:11 xref: PMID:25934623 is_a: NCBITaxon:56448 ! Xanthomonas arboricola [Term] id: NCBITaxon:48792 name: Streptocarpus sect. Saintpaulia namespace: ncbi_taxonomy synonym: "Saintpaulia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1844578 ! Streptocarpus subgen. Streptocarpella property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:48865 name: Fusarium redolens namespace: ncbi_taxonomy alt_id: NCBITaxon:1133677 alt_id: NCBITaxon:56678 synonym: "Fusarium oxysporum var. redolens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2954887 ! Fusarium redolens species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4890 name: Ascomycota namespace: ncbi_taxonomy synonym: "ascomycete fungi" RELATED blast_name [] synonym: "ascomycetes" EXACT genbank_common_name [] synonym: "ascomycetes" RELATED blast_name [] synonym: "sac fungi" EXACT common_name [] xref: GC_ID:1 xref: PMID:17572334 is_a: NCBITaxon:451864 ! Dikarya property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:4891 name: Saccharomycetes namespace: ncbi_taxonomy synonym: "Hemiascomycetes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:147537 ! Saccharomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:4892 name: Saccharomycetales namespace: ncbi_taxonomy synonym: "budding yeasts" RELATED blast_name [] synonym: "Endomycetales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4891 ! Saccharomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:4893 name: Saccharomycetaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:221665 alt_id: NCBITaxon:44280 xref: GC_ID:1 is_a: NCBITaxon:4892 ! Saccharomycetales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:48982 name: Sweet potato mild speckling virus namespace: ncbi_taxonomy synonym: "Sweet potato mild speckling potyvirus" EXACT equivalent_name [] synonym: "sweet potato V virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4910 name: Kluyveromyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4893 ! Saccharomycetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4911 name: Kluyveromyces marxianus namespace: ncbi_taxonomy alt_id: NCBITaxon:1219278 alt_id: NCBITaxon:1859946 alt_id: NCBITaxon:39396 synonym: "Candida kefyr" RELATED synonym [] synonym: "Candida pseudotropicalis" RELATED synonym [] synonym: "Dekkeromyces marxianus" RELATED synonym [] synonym: "Guilliermondella marxiana" RELATED synonym [] synonym: "Kluyveromyces cicerisporus" RELATED synonym [] synonym: "Kluyveromyces fragilis" RELATED synonym [] synonym: "Saccharomyces kefyr" RELATED synonym [] synonym: "Saccharomyces marxianus" RELATED synonym [] synonym: "Zygofabospora marxiana" RELATED synonym [] synonym: "Zygorenospora marxiana" RELATED synonym [] synonym: "Zygosaccharomyces marxianus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4910 ! Kluyveromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4919 name: Pichia namespace: ncbi_taxonomy alt_id: NCBITaxon:34359 alt_id: NCBITaxon:4908 synonym: "Hansenula" RELATED synonym [] synonym: "Issatchenkia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1156497 ! Pichiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:49222 name: Sphaceloma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40995 ! Elsinoaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:49223 name: Sphaceloma manihoticola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:49222 ! Sphaceloma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:49274 name: Solanum subgen. Lycopersicon namespace: ncbi_taxonomy synonym: "Lycopersicon" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4107 ! Solanum property_value: has_rank NCBITaxon:subgenus [Term] id: NCBITaxon:493204 name: Polyscytalum pustulans namespace: ncbi_taxonomy synonym: "Oospora pustulans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:470477 ! Polyscytalum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:49390 name: Coffea canephora namespace: ncbi_taxonomy synonym: "Coffea canephora var. robusta" RELATED synonym [] synonym: "Coffea robusta" RELATED synonym [] synonym: "robusta coffee" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:13442 ! Coffea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:494041 name: Ophiognomonia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:218102 ! Gnomoniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:495088 name: Mamianiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:152655 ! Diaporthales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:495089 name: Mamianiella coryli namespace: ncbi_taxonomy synonym: "Sphaeria coryli" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:495088 ! Mamianiella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:4953 name: Zygosaccharomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4893 ! Saccharomycetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:4954 name: Zygosaccharomyces bailii namespace: ncbi_taxonomy synonym: "Saccharomyces bailii" RELATED synonym [] synonym: "Saccharomyces bailii var. bailii" RELATED synonym [] synonym: "Torulaspora bailii" RELATED synonym [] synonym: "Zygosaccharomyces bailii var. bailii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4953 ! Zygosaccharomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:49647 name: Primula namespace: ncbi_taxonomy synonym: "primroses" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:4335 ! Primulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:49745 name: Dahlia sp. (in: eudicots) namespace: ncbi_taxonomy synonym: "Dahlia sp." EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2676692 ! unclassified Dahlia (in: eudicots) property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:497719 name: Pratylenchus lentis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45927 ! Pratylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:49818 name: Genista namespace: ncbi_taxonomy synonym: "woadwaxen" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:163729 ! Genisteae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:498732 name: Pestalotiopsis guepinii namespace: ncbi_taxonomy alt_id: NCBITaxon:1484606 synonym: "Pestalotia guepinii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37840 ! Pestalotiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:500171 name: Colletotrichum lini namespace: ncbi_taxonomy alt_id: NCBITaxon:34408 synonym: "Colletotrichum linicola" RELATED synonym [] synonym: "Gloeosporium lini" RELATED synonym [] xref: GC_ID:1 xref: PMID:25492986 is_a: NCBITaxon:2707350 ! Colletotrichum destructivum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:50018 name: Oligonychus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:32262 ! Tetranychidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5008 name: Taphrinales namespace: ncbi_taxonomy alt_id: NCBITaxon:27329 synonym: "Protomycetales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:147555 ! Taphrinomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5009 name: Taphrinaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5008 ! Taphrinales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5010 name: Taphrina namespace: ncbi_taxonomy alt_id: NCBITaxon:231967 alt_id: NCBITaxon:231969 synonym: "Lalaria" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5009 ! Taphrinaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5011 name: Taphrina deformans namespace: ncbi_taxonomy synonym: "Ascomyces deformans" RELATED synonym [] synonym: "Lalaria deformans" RELATED synonym [] synonym: "peach leaf curl fungus" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:5010 ! Taphrina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5012 name: Taphrina wiesneri namespace: ncbi_taxonomy synonym: "Exoascus wiesneri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5010 ! Taphrina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5014 name: Dothideales namespace: ncbi_taxonomy synonym: "Pyrenomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:451867 ! Dothideomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:50141 name: Loranthus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003274 ! Loranthinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:50156 name: Oryctanthus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003272 ! Psittacanthinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:50158 name: Phthirusa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1003272 ! Psittacanthinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5016 name: Bipolaris maydis namespace: ncbi_taxonomy alt_id: NCBITaxon:509226 synonym: "Cochliobolus heterostrophus" RELATED synonym [] synonym: "Drechslera maydis" RELATED synonym [] synonym: "Heliminthosporium maydis" RELATED synonym [] synonym: "Helminthosporium maydis" RELATED synonym [] synonym: "Ophiobolus heterostrophus" RELATED synonym [] synonym: "southern corn leaf blight pathogen" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5017 name: Bipolaris zeicola namespace: ncbi_taxonomy alt_id: NCBITaxon:74425 synonym: "Cochliobolus carbonum" RELATED synonym [] synonym: "Drechslera carbonum" RELATED synonym [] synonym: "Helminthosporium carbonum" RELATED synonym [] synonym: "Helminthosporium zeicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33194 ! Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5020 name: Phaeosphaeriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:378064 xref: GC_ID:1 is_a: NCBITaxon:715340 ! Pleosporineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5021 name: Leptosphaeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34374 ! Leptosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5022 name: Plenodomus lingam namespace: ncbi_taxonomy alt_id: NCBITaxon:1077373 synonym: "blackleg of canola fungus" EXACT common_name [] synonym: "blackleg of crucifers fungus" EXACT common_name [] synonym: "blackleg of rapeseed fungus" EXACT genbank_common_name [] synonym: "Leptosphaeria maculans" RELATED synonym [] synonym: "Phoma lingam" RELATED synonym [] synonym: "Plenodomus rabenhorstii" RELATED synonym [] synonym: "Sphaeria lingam" RELATED synonym [] xref: GC_ID:1 xref: PMID:24014897 is_a: NCBITaxon:220671 ! Plenodomus lingam/Leptosphaeria maculans species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5023 name: Venturiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:155170 xref: GC_ID:1 is_a: NCBITaxon:1111111 ! Venturiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5024 name: Venturia namespace: ncbi_taxonomy synonym: "Venturia" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:5023 ! Venturiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5025 name: Venturia inaequalis namespace: ncbi_taxonomy alt_id: NCBITaxon:501330 synonym: "Fusicladium pomi" RELATED synonym [] synonym: "Sphaerella inaequalis" RELATED synonym [] synonym: "Spilocaea pomi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5024 ! Venturia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5027 name: Pyrenophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5028 name: Pyrenophora graminea namespace: ncbi_taxonomy alt_id: NCBITaxon:33200 synonym: "Drechslera graminea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5027 ! Pyrenophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5033 name: Pseudomicrostroma juglandis namespace: ncbi_taxonomy synonym: "Ascomyces juglandis" RELATED synonym [] synonym: "Fusidium juglandis" RELATED synonym [] synonym: "Microstroma juglandis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1981958 ! Pseudomicrostroma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:50340 name: Pseudomonas fuscovaginae namespace: ncbi_taxonomy synonym: "Pseudomonas fuscivaginae" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:136849 ! Pseudomonas syringae group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:50375 name: Fusicladium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1111112 ! Sympoventuriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:50381 name: Trichaptum biforme namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40451 ! Trichaptum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5042 name: Eurotiales namespace: ncbi_taxonomy alt_id: NCBITaxon:36045 synonym: "Elaphomycetales" RELATED synonym [] synonym: "green and blue molds" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:451871 ! Eurotiomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5044 name: Hapsidospora chrysogena namespace: ncbi_taxonomy alt_id: NCBITaxon:3003027 synonym: "Cephalosporium acremonium" RELATED synonym [] synonym: "Cephalosporium chrysogenum" RELATED synonym [] synonym: "Hapsidospora sp. LH-2022a" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:95323 ! Hapsidospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:50451 name: Arabis namespace: ncbi_taxonomy synonym: "rockcress" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:981070 ! Arabideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5046 name: Sarocladium strictum namespace: ncbi_taxonomy alt_id: NCBITaxon:1452525 synonym: "Acremonium strictum" RELATED synonym [] synonym: "Sarocladium strictum (W. Gams) Summerbell 2011" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:284134 ! Sarocladium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5052 name: Aspergillus namespace: ncbi_taxonomy alt_id: NCBITaxon:1131475 alt_id: NCBITaxon:36632 alt_id: NCBITaxon:36634 alt_id: NCBITaxon:37503 alt_id: NCBITaxon:5071 alt_id: NCBITaxon:743109 synonym: "Chaetosartorya" RELATED synonym [] synonym: "Emericella" RELATED synonym [] synonym: "Petromyces" RELATED synonym [] synonym: "Phialosimplex" RELATED synonym [] synonym: "Polypaecilum" RELATED synonym [] xref: GC_ID:1 xref: PMID:20141373 xref: PMID:28082760 is_a: NCBITaxon:1131492 ! Aspergillaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:50557 name: Insecta namespace: ncbi_taxonomy synonym: "insects" RELATED blast_name [] synonym: "true insects" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:6960 ! Hexapoda property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:5059 name: Aspergillus flavus namespace: ncbi_taxonomy alt_id: NCBITaxon:422207 synonym: "Aspergillus flavus var. parvisclerotigenus" RELATED synonym [] synonym: "Aspergillus parvisclerotigenus" RELATED synonym [] synonym: "Petromyces flavus" RELATED synonym [] xref: GC_ID:1 xref: PMID:16094871 xref: PMID:30108412 is_a: NCBITaxon:2720871 ! Aspergillus subgen. Circumdati property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5061 name: Aspergillus niger namespace: ncbi_taxonomy alt_id: NCBITaxon:319628 synonym: "Aspergillus lacticoffeatus" RELATED synonym [] synonym: "Aspergillus lacticoffeatus Frisvad & Samson, 2004" RELATED synonym [] xref: GC_ID:1 xref: PMID:21892240 is_a: NCBITaxon:2720871 ! Aspergillus subgen. Circumdati property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5067 name: Aspergillus parasiticus namespace: ncbi_taxonomy alt_id: NCBITaxon:1521359 alt_id: NCBITaxon:1521360 alt_id: NCBITaxon:1521361 alt_id: NCBITaxon:1521362 alt_id: NCBITaxon:1521363 alt_id: NCBITaxon:1521364 alt_id: NCBITaxon:1521365 alt_id: NCBITaxon:1521366 alt_id: NCBITaxon:1521367 xref: GC_ID:1 is_a: NCBITaxon:5052 ! Aspergillus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5073 name: Penicillium namespace: ncbi_taxonomy alt_id: NCBITaxon:28577 synonym: "Eupenicillium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1131492 ! Aspergillaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:50736 name: Crenicichla namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:319086 ! Crenicichlini property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5076 name: Penicillium chrysogenum namespace: ncbi_taxonomy alt_id: NCBITaxon:115827 alt_id: NCBITaxon:1452524 alt_id: NCBITaxon:1846263 alt_id: NCBITaxon:1846264 alt_id: NCBITaxon:5080 alt_id: NCBITaxon:947850 alt_id: NCBITaxon:947851 synonym: "Penicillium chrysogeum" RELATED synonym [] synonym: "Penicillium notatum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:254878 ! Penicillium chrysogenum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5077 name: Penicillium citrinum namespace: ncbi_taxonomy alt_id: NCBITaxon:2211329 alt_id: NCBITaxon:60176 xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5081 name: Penicillium sp. namespace: ncbi_taxonomy alt_id: NCBITaxon:1955093 synonym: "Eupenicillium sp." EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2593313 ! unclassified Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:509222 name: Dothiorella gregaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:276832 ! Dothiorella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:509239 name: Septogloeum namespace: ncbi_taxonomy synonym: "mitosporic Ascomycota" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:129384 ! Ascomycota incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:509241 name: Mariannaea elegans namespace: ncbi_taxonomy synonym: "Penicillium elegans" RELATED synonym [] synonym: "Spicaria elegans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:64630 ! Mariannaea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5094 name: Talaromyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28568 ! Trichocomaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5097 name: Monascus namespace: ncbi_taxonomy synonym: "Monascus" EXACT scientific_name [] xref: GC_ID:1 xref: PMID:28539687 is_a: NCBITaxon:1131492 ! Aspergillaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5098 name: Monascus purpureus namespace: ncbi_taxonomy alt_id: NCBITaxon:184207 alt_id: NCBITaxon:296184 alt_id: NCBITaxon:46690 alt_id: NCBITaxon:64613 synonym: "Monascus albidus" RELATED synonym [] synonym: "Monascus anka" RELATED synonym [] synonym: "Monascus araneosus" RELATED synonym [] synonym: "Monascus purpurea" RELATED synonym [] synonym: "Monascus rubiginosus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5097 ! Monascus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:509922 name: Tylenchorhynchus claytoni namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:288494 ! Tylenchorhynchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:510258 name: Fusarium aff. sacchari P05.8.153 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2751833 ! unclassified Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:51029 name: Heterodera glycines namespace: ncbi_taxonomy synonym: "soybean cyst nematode" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5110 name: Claviceps namespace: ncbi_taxonomy alt_id: NCBITaxon:121535 synonym: "Sphacelia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34397 ! Clavicipitaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5111 name: Claviceps purpurea namespace: ncbi_taxonomy synonym: "ergot fungus" EXACT genbank_common_name [] synonym: "Sphacelia segetum" RELATED synonym [] synonym: "Sphaeria purpurea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5110 ! Claviceps property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5114 name: Diaporthales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:222544 ! Sordariomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5117 name: Valsaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:218101 alt_id: NCBITaxon:218104 alt_id: NCBITaxon:54898 xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5118 name: Leucostoma namespace: ncbi_taxonomy synonym: "Leucostoma" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:5117 ! Valsaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5120 name: Erysiphales namespace: ncbi_taxonomy synonym: "Plectomycetes" RELATED in_part [] synonym: "powdery mildews" RELATED blast_name [] synonym: "Pyrenomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:147548 ! Leotiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5121 name: Erysiphe namespace: ncbi_taxonomy alt_id: NCBITaxon:52585 synonym: "Uncinula" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:51240 name: Juglans regia namespace: ncbi_taxonomy synonym: "English walnut" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:16718 ! Juglans property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5125 name: Hypocreales namespace: ncbi_taxonomy synonym: "Pyrenomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:222543 ! Hypocreomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5127 name: Fusarium fujikuroi namespace: ncbi_taxonomy alt_id: NCBITaxon:146992 alt_id: NCBITaxon:1516068 alt_id: NCBITaxon:171628 alt_id: NCBITaxon:42670 synonym: "Gibberella fujikuroi" RELATED synonym [] synonym: "Lisea fujikuroi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5128 name: Fusarium sambucinum namespace: ncbi_taxonomy alt_id: NCBITaxon:2081995 alt_id: NCBITaxon:5521 synonym: "Fusarium roseum" RELATED synonym [] synonym: "Fusarium sambucinum var. sambucinum" RELATED synonym [] synonym: "Gibberella pulicaris" RELATED synonym [] synonym: "Sphaeria pulicaris" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:569360 ! Fusarium sambucinum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5129 name: Hypocreaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:118023 alt_id: NCBITaxon:34401 alt_id: NCBITaxon:45848 synonym: "anamorphic Hypocreaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5133 name: Nectria namespace: ncbi_taxonomy alt_id: NCBITaxon:108888 alt_id: NCBITaxon:140104 synonym: "Nectria" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5135 name: Phyllachorales namespace: ncbi_taxonomy alt_id: NCBITaxon:264598 synonym: "Polystigmatales" RELATED synonym [] synonym: "Pyrenomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:222544 ! Sordariomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5136 name: Phyllachoraceae namespace: ncbi_taxonomy alt_id: NCBITaxon:34404 synonym: "Phyllachoraceae anamorphs" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5135 ! Phyllachorales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5139 name: Sordariales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:222544 ! Sordariomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5151 name: Ophiostomatales namespace: ncbi_taxonomy synonym: "Pyrenomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:222544 ! Sordariomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5152 name: Ophiostomataceae namespace: ncbi_taxonomy alt_id: NCBITaxon:117573 xref: GC_ID:1 is_a: NCBITaxon:5151 ! Ophiostomatales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5157 name: Ceratocystis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1028423 ! Ceratocystidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5158 name: Ceratocystis fimbriata namespace: ncbi_taxonomy alt_id: NCBITaxon:1608159 xref: GC_ID:1 is_a: NCBITaxon:5157 ! Ceratocystis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5159 name: Ophiostoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5152 ! Ophiostomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:516942 name: Epialtidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6804 ! Majoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5174 name: Ophiostoma ulmi namespace: ncbi_taxonomy synonym: "Ceratostomella ulmi" RELATED synonym [] synonym: "Dutch elm disease fungus" EXACT common_name [] synonym: "Graphium ulmi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5159 ! Ophiostoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5178 name: Helotiales namespace: ncbi_taxonomy alt_id: NCBITaxon:186570 xref: GC_ID:1 xref: PMID:32647610 is_a: NCBITaxon:147548 ! Leotiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5179 name: Sclerotinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5180 name: Sclerotinia sclerotiorum namespace: ncbi_taxonomy alt_id: NCBITaxon:2100106 synonym: "Peziza sclerotiorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5179 ! Sclerotinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5185 name: Pezizales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147549 ! Pezizomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5204 name: Basidiomycota namespace: ncbi_taxonomy synonym: "basidiomycete fungi" RELATED blast_name [] synonym: "basidiomycetes" EXACT genbank_common_name [] synonym: "basidiomycetes" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:451864 ! Dikarya property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:522266 name: Melanconium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:148311 ! Melanconidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:523720 name: Anareolatae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:213547 ! Verophasmatodea property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:5238 name: Thanatephorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5250 ! Ceratobasidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:524135 name: Diapheromerinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:409189 ! Diapheromeridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:524136 name: Diapheromerini namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:524135 ! Diapheromerinae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:5244 name: Septobasidiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162484 ! Pucciniomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5245 name: Septobasidiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5244 ! Septobasidiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5246 name: Septobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5245 ! Septobasidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5250 name: Ceratobasidiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:34425 xref: GC_ID:1 is_a: NCBITaxon:36064 ! Cantharellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5251 name: Ceratobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5250 ! Ceratobasidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:52517 name: Eustoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2546012 ! Chironiinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:52518 name: Eustoma grandiflorum namespace: ncbi_taxonomy synonym: "Bilamista grandiflora" RELATED synonym [] synonym: "bluebells" EXACT common_name [] synonym: "Eustoma exaltatum subsp. russellianum" RELATED synonym [] synonym: "Eustoma grandiflorum (Raf.) Shinners, 1957" RELATED synonym [] synonym: "Eustoma russellianum" RELATED synonym [] synonym: "Lisianthius russellianus" RELATED synonym [] synonym: "prairie gentian" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:52517 ! Eustoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5252 name: Ceratobasidium cornigerum namespace: ncbi_taxonomy synonym: "Corticium cornigerum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5251 ! Ceratobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5257 name: Ustilaginomycetes namespace: ncbi_taxonomy alt_id: NCBITaxon:62909 synonym: "Ustilaginomycetidae" EXACT equivalent_name [] xref: GC_ID:1 xref: PMID:17486967 xref: PMID:17572334 is_a: NCBITaxon:452284 ! Ustilaginomycotina property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:5258 name: Pucciniales namespace: ncbi_taxonomy synonym: "rust fungi" RELATED blast_name [] synonym: "rusts" EXACT genbank_common_name [] synonym: "Uredinales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:162484 ! Pucciniomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5259 name: Melampsoraceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5260 name: Melampsora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5259 ! Melampsoraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5261 name: Melampsora lini namespace: ncbi_taxonomy synonym: "flax rust" EXACT genbank_common_name [] synonym: "Hypodermium lini" RELATED synonym [] synonym: "Uredo lini" RELATED synonym [] synonym: "Xyloma lini" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5260 ! Melampsora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5262 name: Pucciniaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:203926 synonym: "Pucciniosiraceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:526244 name: Trametes elegans namespace: ncbi_taxonomy alt_id: NCBITaxon:252818 synonym: "Artolenzites elegans" RELATED synonym [] synonym: "Daedalea elegans" RELATED synonym [] synonym: "Lenzites elegans" RELATED synonym [] synonym: "Whitfordia elegans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5263 name: Uromyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5262 ! Pucciniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5264 name: Uromyces appendiculatus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5263 ! Uromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5265 name: Gymnosporangium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2792468 ! Gymnosporangiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5267 name: Ustilaginales namespace: ncbi_taxonomy alt_id: NCBITaxon:266789 synonym: "smut fungi" RELATED blast_name [] synonym: "smuts" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:5257 ! Ustilaginomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5268 name: Ustilaginaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:62926 alt_id: NCBITaxon:85578 synonym: "Mycosyringaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5267 ! Ustilaginales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5269 name: Ustilago namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5268 ! Ustilaginaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5270 name: Ustilago maydis namespace: ncbi_taxonomy synonym: "Uredo maydis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5269 ! Ustilago property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5274 name: Graphiolaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5404 ! Exobasidiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5275 name: Graphiola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5274 ! Graphiolaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5276 name: Graphiola phoenicis namespace: ncbi_taxonomy synonym: "Phacidium phoenicis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5275 ! Graphiola property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5279 name: Tilletiaceae namespace: ncbi_taxonomy synonym: "bunts" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:62916 ! Tilletiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:529477 name: Anisogramma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5117 ! Valsaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:529478 name: Anisogramma anomala namespace: ncbi_taxonomy synonym: "Diatrype anomala" RELATED synonym [] synonym: "eastern filbert blight pathogen" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:529477 ! Anisogramma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:529492 name: Sydowiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:716656 ! Sydowiellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:529493 name: Sydowiella depressula namespace: ncbi_taxonomy synonym: "Gnomonia depressula" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:529492 ! Sydowiella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5296 name: Puccinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5262 ! Pucciniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5297 name: Puccinia graminis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5300 name: Coleosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:106328 ! Coleosporiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5301 name: Coleosporium tussilaginis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5300 ! Coleosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:53010 name: Cotton leaf curl virus namespace: ncbi_taxonomy synonym: "CLCuV" BROAD acronym [] synonym: "Cotton leaf curl geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:291027 ! unclassified Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5302 name: Agaricomycotina namespace: ncbi_taxonomy synonym: "Hymenomycetes" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5204 ! Basidiomycota property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:5303 name: Polyporales namespace: ncbi_taxonomy alt_id: NCBITaxon:77131 synonym: "Aphyllophorales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:355688 ! Agaricomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5304 name: Corticiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:56744 xref: GC_ID:1 is_a: NCBITaxon:452338 ! Corticiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5305 name: Phanerochaete namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:396331 ! Phanerochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5307 name: Phlebia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:81064 ! Meruliaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5309 name: Athelia namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:80628 ! Atheliaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5314 name: Ganoderma namespace: ncbi_taxonomy alt_id: NCBITaxon:2683736 synonym: "Magoderna" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5315 name: Ganoderma lucidum namespace: ncbi_taxonomy alt_id: NCBITaxon:5316 synonym: "Boletus lucidus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5314 ! Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5317 name: Polyporaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1195528 alt_id: NCBITaxon:5313 alt_id: NCBITaxon:83233 alt_id: NCBITaxon:83234 synonym: "bracket fungi" EXACT genbank_common_name [] synonym: "Coriolaceae" RELATED synonym [] synonym: "Cryptoporaceae" RELATED synonym [] synonym: "Echinochaetaceae" RELATED synonym [] synonym: "Fomitaceae" RELATED synonym [] synonym: "Ganodermataceae" RELATED synonym [] synonym: "Grammotheleaceae" RELATED synonym [] synonym: "Haddowiaceae" RELATED synonym [] synonym: "Lentinaceae" RELATED synonym [] synonym: "Lentinaceae Julich" RELATED synonym [] synonym: "Lophariaceae" RELATED synonym [] synonym: "Microporaceae" RELATED synonym [] synonym: "Pachykytosporaceae" RELATED synonym [] synonym: "Perenniporiaceae" RELATED synonym [] synonym: "Sparsitubaceae" RELATED synonym [] synonym: "Trametaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5318 name: Irpex namespace: ncbi_taxonomy alt_id: NCBITaxon:1931353 alt_id: NCBITaxon:378267 synonym: "Emmia" RELATED synonym [] synonym: "Flavodontia" RELATED synonym [] synonym: "Hydnopolyporus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1931355 ! Irpicaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5319 name: Irpex lacteus namespace: ncbi_taxonomy alt_id: NCBITaxon:1351710 alt_id: NCBITaxon:29885 synonym: "Polyporus tulipiferae" RELATED synonym [] synonym: "Sistotrema lacteum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5318 ! Irpex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5320 name: Pleurotus namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:104366 ! Pleurotaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5322 name: Pleurotus ostreatus namespace: ncbi_taxonomy synonym: "Agaricus ostreatus" RELATED synonym [] synonym: "oyster mushroom" EXACT genbank_common_name [] synonym: "shimeji" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:5320 ! Pleurotus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5324 name: Trametes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5325 name: Trametes versicolor namespace: ncbi_taxonomy alt_id: NCBITaxon:57466 synonym: "Bjerkandera versicolor" RELATED synonym [] synonym: "Boletus versicolor" RELATED synonym [] synonym: "Coriolus versicolor" RELATED synonym [] synonym: "Microporus versicolor" RELATED synonym [] synonym: "Poria versicolor" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5327 name: Trametes hirsuta namespace: ncbi_taxonomy alt_id: NCBITaxon:659437 alt_id: NCBITaxon:76129 synonym: "Coriolus hirsutus" RELATED synonym [] synonym: "Hansenia hirsuta" RELATED synonym [] synonym: "Polyporus hirsutus" RELATED synonym [] synonym: "Polystictoides hirsutus" RELATED synonym [] synonym: "Polystictus hirsutus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5329 name: Pseudospongipellis unicolor namespace: ncbi_taxonomy synonym: "Polyporus unicolor" RELATED synonym [] synonym: "Sarcodontia unicolor" RELATED synonym [] synonym: "Spongipellis unicolor" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2975570 ! Pseudospongipellis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5330 name: Bjerkandera namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:396331 ! Phanerochaetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5332 name: Schizophyllaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2985477 ! Schizophyllineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5333 name: Schizophyllum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5332 ! Schizophyllaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:53335 name: Pantoea namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:19946052 xref: PMID:26296376 is_a: NCBITaxon:1903409 ! Erwiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5334 name: Schizophyllum commune namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5333 ! Schizophyllum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5338 name: Agaricales namespace: ncbi_taxonomy alt_id: NCBITaxon:34455 alt_id: NCBITaxon:48594 alt_id: NCBITaxon:5425 alt_id: NCBITaxon:68772 alt_id: NCBITaxon:68811 synonym: "Agaricales anamorphs" RELATED synonym [] synonym: "anamorphic Agaricales" RELATED synonym [] synonym: "gill mushrooms" EXACT genbank_common_name [] synonym: "Hymenogastrales" RELATED synonym [] synonym: "Lycoperdales" RELATED synonym [] synonym: "Nidulariales" RELATED synonym [] synonym: "Tulostomatales" RELATED synonym [] xref: GC_ID:1 xref: PMID:17572334 is_a: NCBITaxon:452333 ! Agaricomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5339 name: Agaricaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:107855 alt_id: NCBITaxon:5344 alt_id: NCBITaxon:56189 alt_id: NCBITaxon:68812 synonym: "Battarreaceae" RELATED synonym [] synonym: "Podaxaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2982305 ! Agaricineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:53409 name: Pseudomonas coronafaciens namespace: ncbi_taxonomy synonym: "Pseudomonas syringae group genomosp. 4" RELATED synonym [] xref: GC_ID:11 xref: PMID:10319466 xref: PMID:29270162 xref: PMID:30521563 is_a: NCBITaxon:136849 ! Pseudomonas syringae group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:53413 name: Xanthomonas axonopodis namespace: ncbi_taxonomy synonym: "Xanthomonas axonoperis" RELATED synonym [] xref: GC_ID:11 xref: PMID:10758892 xref: PMID:2275852 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5345 name: Coprinus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5339 ! Agaricaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:53484 name: Pyrenophora avenae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5027 ! Pyrenophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:53485 name: Pyrenophora teres namespace: ncbi_taxonomy alt_id: NCBITaxon:2074965 alt_id: NCBITaxon:33201 synonym: "barley net-spot blotch disease agent" EXACT common_name [] synonym: "Drechslera teres" RELATED synonym [] synonym: "Helminthosporium teres Sacc., 1886" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5027 ! Pyrenophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5357 name: Lentinus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:535817 name: Cryptosporiopsis tarraconensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:108533 ! Cryptosporiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:53590 name: Orobanche cernua namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36747 ! Orobanche property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5365 name: Lentinus tigrinus namespace: ncbi_taxonomy alt_id: NCBITaxon:313356 synonym: "Agaricus tigrinus" RELATED synonym [] synonym: "Panus tigrinus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5357 ! Lentinus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:538190 name: Pseudopeziza namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2793945 ! Drepanopezizaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:538191 name: Pseudopeziza medicaginis namespace: ncbi_taxonomy synonym: "Phacidium medicaginis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:538190 ! Pseudopeziza property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:538540 name: Phyllosticta sojicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:121621 ! Phyllosticta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:53983 name: Phytophthora cambivora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:53984 name: Phytophthora citricola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:53985 name: Phytophthora fragariae namespace: ncbi_taxonomy alt_id: NCBITaxon:129363 synonym: "Phytophthora fragariae var. fragariae" RELATED synonym [] xref: GC_ID:1 xref: PMID:17682774 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:54038 name: Sphaerodothis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5136 ! Phyllachoraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5404 name: Exobasidiales namespace: ncbi_taxonomy alt_id: NCBITaxon:63258 xref: GC_ID:1 is_a: NCBITaxon:452283 ! Exobasidiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5405 name: Exobasidiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5404 ! Exobasidiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:5406 name: Exobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5405 ! Exobasidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:54066 name: Xylophilus namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:224471 ! Burkholderiales genera incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:54067 name: Xylophilus ampelinus namespace: ncbi_taxonomy synonym: "Xanthomonas ampelina" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:54066 ! Xylophilus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5407 name: Exobasidium vaccinii namespace: ncbi_taxonomy synonym: "Fusidium vaccinii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5406 ! Exobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5422 name: Kabatiella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1570301 ! Saccotheciaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:54239 name: Clerodendrum aff. humbertii namespace: ncbi_taxonomy synonym: "Clerodendrum sp. aff. humbertii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:13432 ! Clerodendrum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:542832 name: Peronospora effusa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5429 name: Sporobolomyces namespace: ncbi_taxonomy alt_id: NCBITaxon:165793 alt_id: NCBITaxon:4985 alt_id: NCBITaxon:5001 synonym: "Sporidiobolus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1799696 ! Sporidiobolaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:543 name: Enterobacteriaceae namespace: ncbi_taxonomy synonym: "Enterobacteraceae" RELATED synonym [] synonym: "enterobacteria" RELATED blast_name [] synonym: "gamma-3 proteobacteria" RELATED in_part [] xref: GC_ID:11 xref: PMID:10555323 xref: PMID:10555334 xref: PMID:16166704 xref: PMID:27620848 is_a: NCBITaxon:91347 ! Enterobacterales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:543769 name: Rhizaria namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:30257078 is_a: NCBITaxon:2698737 ! Sar property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:54444 name: Helicobasidium mompa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:48120 ! Helicobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:544448 name: Mycoplasmatota namespace: ncbi_taxonomy synonym: "\"Mollicutaeota\" Oren et al. 2015" RELATED synonym [] synonym: "\"Tenericutes\" Murray 1984" RELATED synonym [] synonym: "Mollicutota" RELATED synonym [] synonym: "Tenericutes" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:1783272 ! Terrabacteria group property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:54510 name: Phytophthora medicaginis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5453 name: Ascochyta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5454 name: Ascochyta rabiei namespace: ncbi_taxonomy alt_id: NCBITaxon:547106 synonym: "Didymella rabiei" RELATED synonym [] synonym: "Mycosphaerella rabiei" RELATED synonym [] synonym: "Phoma rabiei" RELATED synonym [] synonym: "Zythia rabiei" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5455 name: Colletotrichum namespace: ncbi_taxonomy alt_id: NCBITaxon:13548 synonym: "Glomerella" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:681950 ! Glomerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5462 name: Colletotrichum lagenaria namespace: ncbi_taxonomy alt_id: NCBITaxon:145965 synonym: "Colletotrichum lagenaria (Pass.) Ellis & Halst., 1893" RELATED synonym [] synonym: "Fusarium lagenaria" RELATED synonym [] synonym: "Glomerella lagenaria (Pass.) F. Stevens, 1931" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5455 ! Colletotrichum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5464 name: Colletotrichum musae namespace: ncbi_taxonomy alt_id: NCBITaxon:61285 synonym: "Myxosporium musae" RELATED synonym [] xref: GC_ID:1 xref: PMID:23136459 is_a: NCBITaxon:2707338 ! Colletotrichum gloeosporioides species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5465 name: Colletotrichum orbiculare namespace: ncbi_taxonomy alt_id: NCBITaxon:1288462 synonym: "Glomerella cingulata var. orbiculare" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2707354 ! Colletotrichum orbiculare species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5466 name: Colletotrichum trifolii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2707354 ! Colletotrichum orbiculare species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5467 name: Colletotrichum truncatum namespace: ncbi_taxonomy alt_id: NCBITaxon:1365447 alt_id: NCBITaxon:1365448 alt_id: NCBITaxon:51633 alt_id: NCBITaxon:5456 synonym: "Colletotrichum capsici" RELATED synonym [] synonym: "Colletotrichum dematium f. truncatum (Schwein.) Arx, 1957" RELATED synonym [] synonym: "Glomerella glycines" RELATED synonym [] synonym: "Vermicularia capsici" RELATED synonym [] synonym: "Vermicularia truncata" RELATED synonym [] xref: GC_ID:1 xref: PMID:16895753 is_a: NCBITaxon:2707339 ! Colletotrichum truncatum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:54681 name: Grovesinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:54682 name: Grovesinia pyramidalis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:54681 ! Grovesinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:547 name: Enterobacter namespace: ncbi_taxonomy synonym: "\"Aerobacter\" Hormaeche and Edwards 1958" RELATED synonym [] synonym: "Cloaca" RELATED synonym [] xref: GC_ID:11 xref: PMID:23632228 is_a: NCBITaxon:543 ! Enterobacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5473 name: Leptoxyphium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62133 ! Capnodiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5474 name: Leptoxyphium fumago namespace: ncbi_taxonomy synonym: "Caldariomyces fumago" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5473 ! Leptoxyphium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5475 name: Candida namespace: ncbi_taxonomy alt_id: NCBITaxon:1535326 synonym: "Torulopsis" RELATED synonym [] xref: GC_ID:12 is_a: NCBITaxon:1535325 ! Candida/Lodderomyces clade property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5476 name: Candida albicans namespace: ncbi_taxonomy alt_id: NCBITaxon:226999 alt_id: NCBITaxon:300021 alt_id: NCBITaxon:39399 synonym: "Candida albicans var. stellatoidea" RELATED synonym [] synonym: "Candida stellatoidea" RELATED synonym [] synonym: "Dematium albicans" RELATED synonym [] synonym: "Endomyces albicans" RELATED synonym [] synonym: "Monilia albicans" RELATED synonym [] synonym: "Monilia stellatoidea" RELATED synonym [] synonym: "Myceloblastanon albicans" RELATED synonym [] synonym: "Mycotorula albicans" RELATED synonym [] synonym: "Oidium albicans" RELATED synonym [] synonym: "Parasaccharomyces albicans" RELATED synonym [] synonym: "Procandida albicans" RELATED synonym [] synonym: "Procandida stellatoidea" RELATED synonym [] synonym: "Saccharomyces albicans" RELATED synonym [] synonym: "Syringospora albicans" RELATED synonym [] xref: GC_ID:12 is_a: NCBITaxon:5475 ! Candida property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:54788 name: Stagonospora namespace: ncbi_taxonomy alt_id: NCBITaxon:178128 alt_id: NCBITaxon:389638 synonym: "Saccharicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:290882 ! Massarinaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:54790 name: Parastagonospora avenae f. sp. tritici namespace: ncbi_taxonomy synonym: "Leptosphaeria avenaria f. sp. triticea" RELATED synonym [] synonym: "Parastagonospora avenaria f. sp. tritici" RELATED synonym [] synonym: "Phaeosphaeria avenaria f. sp. triticae" EXACT equivalent_name [] synonym: "Phaeosphaeria avenaria f. sp. triticea" EXACT equivalent_name [] synonym: "Phaeosphaeria avenaria f. sp. tritici" EXACT equivalent_name [] synonym: "Phaeosphaeria avenaria f.sp. tritici" RELATED synonym [] synonym: "Septoria avenae f. sp. triticea" EXACT equivalent_name [] synonym: "Stagonospora avenae f.sp. tritici" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1351752 ! Parastagonospora avenae property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:549 name: Pantoea agglomerans namespace: ncbi_taxonomy alt_id: NCBITaxon:547011 alt_id: NCBITaxon:55073 alt_id: NCBITaxon:557 alt_id: NCBITaxon:593110 alt_id: NCBITaxon:697871 alt_id: NCBITaxon:87879 synonym: "Bacillus milletiae" RELATED synonym [] synonym: "Bacterium herbicola" RELATED synonym [] synonym: "Enterobacter agglomerans" RELATED synonym [] synonym: "Erwinia herbicola" RELATED synonym [] synonym: "Erwinia milletiae" RELATED synonym [] synonym: "Pantoea herbicola" RELATED synonym [] synonym: "Pseudomonas herbicola" RELATED synonym [] xref: GC_ID:11 xref: PMID:15545493 xref: PMID:25288660 is_a: NCBITaxon:1654067 ! Pantoea agglomerans group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:54958 name: Amphisphaeriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:190202 alt_id: NCBITaxon:97129 xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:54961 name: Phyllachora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5136 ! Phyllachoraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5498 name: Cladosporium namespace: ncbi_taxonomy alt_id: NCBITaxon:1685474 xref: GC_ID:1 is_a: NCBITaxon:452563 ! Cladosporiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5499 name: Fulvia fulva namespace: ncbi_taxonomy alt_id: NCBITaxon:237551 synonym: "Cladosporium fulvum" RELATED synonym [] synonym: "Mycovellosiella fulva" RELATED synonym [] synonym: "Passalora fulva" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2897311 ! Fulvia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:550 name: Enterobacter cloacae namespace: ncbi_taxonomy alt_id: NCBITaxon:1270202 alt_id: NCBITaxon:1291476 alt_id: NCBITaxon:1616790 alt_id: NCBITaxon:1683540 alt_id: NCBITaxon:175534 alt_id: NCBITaxon:175535 alt_id: NCBITaxon:1806483 alt_id: NCBITaxon:631315 alt_id: NCBITaxon:671748 alt_id: NCBITaxon:671756 alt_id: NCBITaxon:671757 synonym: "Aerobacter cloacae" RELATED synonym [] synonym: "Bacillus cloacae" RELATED synonym [] synonym: "Bacterium cloacae" RELATED synonym [] synonym: "Cloaca cloacae" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:354276 ! Enterobacter cloacae complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5502 name: Curvularia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5503 name: Curvularia lunata namespace: ncbi_taxonomy alt_id: NCBITaxon:1486084 alt_id: NCBITaxon:162308 alt_id: NCBITaxon:757469 synonym: "Acrothecium lunatum" RELATED synonym [] synonym: "Cochliobolus lunata" RELATED synonym [] synonym: "Cochliobolus lunatus" RELATED synonym [] synonym: "Pseudocochliobolus lunatus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5506 name: Fusarium namespace: ncbi_taxonomy alt_id: NCBITaxon:140105 alt_id: NCBITaxon:1634940 alt_id: NCBITaxon:342329 alt_id: NCBITaxon:40620 alt_id: NCBITaxon:5126 synonym: "Albonectria" RELATED synonym [] synonym: "Bisifusarium" RELATED synonym [] synonym: "Cyanonectria" RELATED synonym [] synonym: "Fusarium sect. Setofusarium" RELATED synonym [] synonym: "Geejayessia" RELATED synonym [] synonym: "Gibberella" RELATED synonym [] synonym: "Haematonectria" RELATED synonym [] synonym: "Luteonectria" RELATED synonym [] synonym: "Luteonectria Sand.-Den., L. Lombard, Schroers & Rossman, 2021" RELATED synonym [] synonym: "Neocosmospora" RELATED synonym [] synonym: "Nothofusarium" RELATED synonym [] synonym: "Rectifusarium" RELATED synonym [] synonym: "Setofusarium" RELATED synonym [] xref: GC_ID:1 xref: PMID:23379853 xref: PMID:30728601 xref: PMID:31226019 xref: PMID:33200960 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:55067 name: Phaeosphaeria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5020 ! Phaeosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5507 name: Fusarium oxysporum namespace: ncbi_taxonomy alt_id: NCBITaxon:1471553 alt_id: NCBITaxon:1501447 alt_id: NCBITaxon:1501448 alt_id: NCBITaxon:480706 alt_id: NCBITaxon:685562 alt_id: NCBITaxon:696219 alt_id: NCBITaxon:697218 alt_id: NCBITaxon:697221 synonym: "Fusarium oxysporum Schltdl., 1824" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:171631 ! Fusarium oxysporum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:551 name: Erwinia namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:11155980 xref: PMID:26296376 xref: PMID:9336906 xref: PMID:9779605 is_a: NCBITaxon:1903409 ! Erwiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5514 name: Fusarium sporotrichioides namespace: ncbi_taxonomy alt_id: NCBITaxon:2203386 synonym: "Fusarium sporotrichiella var. sporotrichioides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:569360 ! Fusarium sambucinum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:551454 name: Carnation necrotic fleck virus namespace: ncbi_taxonomy synonym: "NOT Carnation yellow fleck virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:12160 ! Closterovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5515 name: Fusarium acuminatum namespace: ncbi_taxonomy alt_id: NCBITaxon:1501443 alt_id: NCBITaxon:1501444 alt_id: NCBITaxon:1769966 alt_id: NCBITaxon:2056093 alt_id: NCBITaxon:502705 alt_id: NCBITaxon:56687 synonym: "Gibberella acuminata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:679429 ! Fusarium tricinctum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5516 name: Fusarium culmorum namespace: ncbi_taxonomy alt_id: NCBITaxon:1501446 synonym: "Fusisporium culmorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:569360 ! Fusarium sambucinum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55169 name: Botryosphaeria dothidea namespace: ncbi_taxonomy synonym: "Caumadothis dothidea" RELATED synonym [] synonym: "Dothiorella berengeriana" RELATED synonym [] synonym: "Fusicoccum aesculi" RELATED synonym [] synonym: "Sphaeria dothidea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:45132 ! Botryosphaeria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55170 name: Didymella namespace: ncbi_taxonomy alt_id: NCBITaxon:749588 synonym: "Peyronellaea" RELATED synonym [] xref: GC_ID:1 xref: PMID:26955202 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:55172 name: Leptosphaerulina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:55174 name: Leptosphaerulina crassiasca namespace: ncbi_taxonomy synonym: "Pleospora crassiasca" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55172 ! Leptosphaerulina property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5518 name: Fusarium graminearum namespace: ncbi_taxonomy synonym: "Gibberella zeae" RELATED synonym [] synonym: "Gibberella zeae" RELATED genbank_synonym [] synonym: "Gibberella zeae (Schwein.) Petch, 1936" RELATED synonym [] synonym: "Sphaeria zeae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:569360 ! Fusarium sambucinum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55180 name: Guignardia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1424649 ! Phyllostictaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:55181 name: Phyllosticta citricarpa namespace: ncbi_taxonomy synonym: "Guignardia citricarpa" RELATED synonym [] synonym: "Phoma citricarpa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:121621 ! Phyllosticta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:552 name: Erwinia amylovora namespace: ncbi_taxonomy synonym: "Bacillus amylovorus" RELATED synonym [] synonym: "Bacterium amylovorus" RELATED synonym [] synonym: "Micrococcus amylovorus" RELATED synonym [] xref: GC_ID:11 xref: PMID:9779605 is_a: NCBITaxon:551 ! Erwinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5520 name: Microdochium nivale namespace: ncbi_taxonomy alt_id: NCBITaxon:67609 synonym: "Fusarium nivale" RELATED synonym [] synonym: "Lanosa nivalis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:67608 ! Microdochium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55209 name: Pantoea cypripedii namespace: ncbi_taxonomy synonym: "Bacillus cypripedii" RELATED synonym [] synonym: "Erwinia carotovora var. cypripedii" RELATED synonym [] synonym: "Erwinia cypripedii" RELATED synonym [] synonym: "Erwinia cyrpipedii" RELATED synonym [] synonym: "Pectobacterium cypripedii" RELATED synonym [] xref: GC_ID:11 xref: PMID:19946052 xref: PMID:9779605 is_a: NCBITaxon:53335 ! Pantoea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55210 name: Brenneria nigrifluens namespace: ncbi_taxonomy synonym: "Erwinia amylovora var. nigrifluens" RELATED synonym [] synonym: "Erwinia nigrifluens" RELATED synonym [] xref: GC_ID:11 xref: PMID:9779605 is_a: NCBITaxon:71655 ! Brenneria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55212 name: Erwinia rhapontici namespace: ncbi_taxonomy synonym: "Aplanobacter rhaponticum" RELATED synonym [] synonym: "Bacterium rhaponticum" RELATED synonym [] synonym: "Erwinia carotovora var. rhapontici" RELATED synonym [] synonym: "Pectobacterium rhapontici" RELATED synonym [] synonym: "Phytomonas rhapontica" RELATED synonym [] synonym: "Pseudobacterium rhapontici" RELATED synonym [] synonym: "Xanthomonas rhapontica" RELATED synonym [] xref: GC_ID:11 xref: PMID:9779605 is_a: NCBITaxon:551 ! Erwinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55213 name: Brenneria rubrifaciens namespace: ncbi_taxonomy synonym: "Erwinia rubrifaciens" RELATED synonym [] xref: GC_ID:11 xref: PMID:9779605 is_a: NCBITaxon:71655 ! Brenneria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5523 name: Fusarium lateritium namespace: ncbi_taxonomy synonym: "Gibberella baccata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1328926 ! Fusarium lateritium species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:553 name: Pantoea ananatis namespace: ncbi_taxonomy alt_id: NCBITaxon:1853830 alt_id: NCBITaxon:560 synonym: "Bacillus ananas" RELATED synonym [] synonym: "Bacterium ananas" RELATED synonym [] synonym: "Erwinia ananas" RELATED synonym [] synonym: "Erwinia ananatis" RELATED synonym [] synonym: "Erwinia ananus" RELATED synonym [] synonym: "Erwinia herbicola var. ananas" RELATED synonym [] synonym: "Erwinia uredovora" RELATED synonym [] synonym: "Pantoea ananas" RELATED synonym [] synonym: "Pectobacterium ananas" RELATED synonym [] synonym: "Xanthomonas uredovorus" RELATED synonym [] xref: GC_ID:11 xref: PMID:11321121 xref: PMID:18523205 is_a: NCBITaxon:53335 ! Pantoea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:553005 name: Mimulus namespace: ncbi_taxonomy synonym: "Mimulus" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:516942 ! Epialtidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5531 name: Myrothecium namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:27616791 is_a: NCBITaxon:1667166 ! Stachybotryaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:55348 name: Peniophora cinerea namespace: ncbi_taxonomy alt_id: NCBITaxon:1635071 xref: GC_ID:1 is_a: NCBITaxon:40463 ! Peniophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5538 name: Scytalidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:221903 ! Leotiomycetes incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:554 name: Pectobacterium carotovorum namespace: ncbi_taxonomy synonym: "Bacillus carotovorus" RELATED synonym [] synonym: "Bacterium carotovorum" RELATED synonym [] synonym: "Erwinia carotovora" RELATED synonym [] xref: GC_ID:11 xref: PMID:12710602 xref: PMID:31343401 xref: PMID:9779605 is_a: NCBITaxon:122277 ! Pectobacterium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5543 name: Trichoderma namespace: ncbi_taxonomy alt_id: NCBITaxon:1929497 alt_id: NCBITaxon:29859 alt_id: NCBITaxon:40047 alt_id: NCBITaxon:42334 synonym: "Aphysiostroma" RELATED synonym [] synonym: "Chromocrea" RELATED synonym [] synonym: "Creopus" RELATED synonym [] synonym: "Hypocrea" RELATED synonym [] synonym: "Pseudohypocrea" RELATED synonym [] synonym: "Sarawakus" RELATED synonym [] xref: GC_ID:1 xref: PMID:26734542 is_a: NCBITaxon:5129 ! Hypocreaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:554373 name: Moniliophthora perniciosa FA553 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:153609 ! Moniliophthora perniciosa property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:5544 name: Trichoderma harzianum namespace: ncbi_taxonomy alt_id: NCBITaxon:1082954 alt_id: NCBITaxon:194532 alt_id: NCBITaxon:64503 alt_id: NCBITaxon:929689 xref: GC_ID:1 is_a: NCBITaxon:5543 ! Trichoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5547 name: Trichoderma viride namespace: ncbi_taxonomy alt_id: NCBITaxon:303616 alt_id: NCBITaxon:362035 alt_id: NCBITaxon:482421 alt_id: NCBITaxon:65470 alt_id: NCBITaxon:79661 alt_id: NCBITaxon:79662 synonym: "Hypocrea rufa" RELATED synonym [] synonym: "Sphaeria rufa" RELATED synonym [] synonym: "Trichoderma lignorum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5543 ! Trichoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:554915 name: Amoebozoa namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23020233 xref: PMID:30257078 is_a: NCBITaxon:2759 ! Eukaryota property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:555 name: Pectobacterium carotovorum subsp. carotovorum namespace: ncbi_taxonomy synonym: "Erwinia aroideae" RELATED synonym [] synonym: "Erwinia carotovora carotovora" RELATED synonym [] synonym: "Erwinia carotovora subsp. carotovora" RELATED synonym [] xref: GC_ID:11 xref: PMID:12710602 xref: PMID:27130313 xref: PMID:9779605 is_a: NCBITaxon:554 ! Pectobacterium carotovorum property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:55512 name: Pistacia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4011 ! Anacardiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:55513 name: Pistacia vera namespace: ncbi_taxonomy synonym: "pistachio" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:55512 ! Pistacia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55588 name: Uromyces viciae-fabae namespace: ncbi_taxonomy synonym: "Uredo viciae-fabae" RELATED synonym [] synonym: "Uromyces fabae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5263 ! Uromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:556 name: Dickeya chrysanthemi namespace: ncbi_taxonomy alt_id: NCBITaxon:1566027 alt_id: NCBITaxon:882332 alt_id: NCBITaxon:882334 alt_id: NCBITaxon:882343 alt_id: NCBITaxon:882345 synonym: "Erwinia carotovora var. chrysanthemi" RELATED synonym [] synonym: "Erwinia chrysanhemi" RELATED synonym [] synonym: "Erwinia chrysanthemi" RELATED synonym [] synonym: "Pectobacterium carotovorum var. chrysanthemi" RELATED synonym [] synonym: "Pectobacterium cartovorum f. sp. chrysanthemi" RELATED synonym [] synonym: "Pectobacterium chrysanthemi" RELATED synonym [] synonym: "Pectobacterium chrysanthemi = Erwinia chrysanthemi" RELATED genbank_synonym [] synonym: "Pectobacterium parthenii" RELATED synonym [] synonym: "Pectobacterium parthenii var. chrysanthemi" RELATED synonym [] synonym: "Pectobacterium parthenii var. dianthicola" RELATED synonym [] xref: GC_ID:11 xref: PMID:16014461 xref: PMID:9779605 is_a: NCBITaxon:204037 ! Dickeya property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5566 name: Sclerotium hydrophilum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:109384 ! Sclerotium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5574 name: Helicobasidium purpureum namespace: ncbi_taxonomy alt_id: NCBITaxon:128103 alt_id: NCBITaxon:48121 synonym: "Helicobasidium brebissonii" RELATED synonym [] synonym: "Hypochnus purpureus" RELATED synonym [] synonym: "Rhizoctonia crocorum" RELATED synonym [] synonym: "Rhizoctonia violacea" RELATED synonym [] synonym: "Thanatophytum crocorum" RELATED synonym [] synonym: "violet root rot" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:48120 ! Helicobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:55771 name: Bromus japonicus namespace: ncbi_taxonomy synonym: "Japanese brome" EXACT common_name [] synonym: "Japanese chess" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4501 ! Bromus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5579 name: Aureobasidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1570301 ! Saccotheciaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:558 name: Erwinia sp. namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2622719 ! unclassified Erwinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5580 name: Aureobasidium pullulans namespace: ncbi_taxonomy alt_id: NCBITaxon:1229722 alt_id: NCBITaxon:178873 alt_id: NCBITaxon:559562 synonym: "Aureobasidium pullulans (de Bary & Lowenthal) G. Arnaud, 1918" RELATED synonym [] synonym: "Aureobasidium pullulans subsp. pullulans" RELATED synonym [] synonym: "Aureobasidium pullulans var. pullulans" RELATED synonym [] synonym: "Dematium pullulans" RELATED synonym [] xref: GC_ID:1 xref: PMID:24984952 is_a: NCBITaxon:5579 ! Aureobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5592 name: Microascales namespace: ncbi_taxonomy alt_id: NCBITaxon:45490 synonym: "Plectomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:222543 ! Hypocreomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5593 name: Microascaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:34396 xref: GC_ID:1 is_a: NCBITaxon:5592 ! Microascales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:559639 name: Pseudocercospora purpurea namespace: ncbi_taxonomy alt_id: NCBITaxon:874506 synonym: "Cercospora purpurea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131324 ! Pseudocercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5598 name: Alternaria namespace: ncbi_taxonomy alt_id: NCBITaxon:645883 xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5599 name: Alternaria alternata namespace: ncbi_taxonomy alt_id: NCBITaxon:1245777 alt_id: NCBITaxon:1245780 alt_id: NCBITaxon:1532209 alt_id: NCBITaxon:447528 alt_id: NCBITaxon:509205 alt_id: NCBITaxon:631441 alt_id: NCBITaxon:650477 synonym: "Alternaria tenuis" RELATED synonym [] synonym: "Torula alternata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:187734 ! Alternaria alternata complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5600 name: Phialophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:43219 ! Herpotrichiellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:561152 name: Scopulariopsis brevicaulis namespace: ncbi_taxonomy alt_id: NCBITaxon:40375 synonym: "arsenic fungus" EXACT genbank_common_name [] synonym: "Microascus brevicaulis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40374 ! Scopulariopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:561285 name: Geastrumia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:93133 ! Mycosphaerellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:561286 name: Geastrumia polystigmatis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:561285 ! Geastrumia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5629 name: Laetiporus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2028212 ! Laetiporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5630 name: Laetiporus sulphureus namespace: ncbi_taxonomy synonym: "chicken-of-the-woods" EXACT common_name [] synonym: "Laetiporus sulfureus" RELATED synonym [] synonym: "Sporotrichum versisporum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5629 ! Laetiporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5631 name: Lenzites namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:5632 name: Lenzites betulinus namespace: ncbi_taxonomy synonym: "Agaricus betulinus" RELATED synonym [] synonym: "Lenzites betulinus (L.) Fr., 1838" RELATED synonym [] synonym: "Trametes betulina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5631 ! Lenzites property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5643 name: Trametes cinnabarina namespace: ncbi_taxonomy synonym: "Pycnoporus cinnabarinus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5324 ! Trametes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:5644 name: Stereum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:103376 ! Stereaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:56448 name: Xanthomonas arboricola namespace: ncbi_taxonomy alt_id: NCBITaxon:1226785 alt_id: NCBITaxon:517754 alt_id: NCBITaxon:857959 xref: GC_ID:11 xref: PMID:25934623 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:56450 name: Xanthomonas cassavae namespace: ncbi_taxonomy synonym: "Xanthomonas campestris pv. Cassavae" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:56459 name: Xanthomonas vasicola namespace: ncbi_taxonomy alt_id: NCBITaxon:133782 synonym: "Xanthomonas campestris pv. holcicola" RELATED synonym [] synonym: "Xanthomonas holcicola" RELATED synonym [] synonym: "Xanthomonas vasicola pv. holcicola" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:56486 name: Elm mottle virus namespace: ncbi_taxonomy synonym: "EMoV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:565396 name: Chaetodiplodia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147498 ! Pleosporales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:565405 name: Pseudodiplodia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147498 ! Pleosporales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:565414 name: Ascochyta hordei namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:565424 name: Dothiorella ulmi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:276832 ! Dothiorella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:565434 name: Selenophoma linicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:242511 ! Selenophoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:56615 name: Puccinia graminis f. sp. tritici namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5297 ! Puccinia graminis property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis [Term] id: NCBITaxon:56641 name: Fusarium cerealis namespace: ncbi_taxonomy alt_id: NCBITaxon:33204 alt_id: NCBITaxon:490060 synonym: "Fusarium crookwellense" RELATED synonym [] synonym: "Fusisporium cerealis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:569360 ! Fusarium sambucinum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:56674 name: Neonectria galligena namespace: ncbi_taxonomy alt_id: NCBITaxon:13475 alt_id: NCBITaxon:140059 synonym: "Cylindrocarpon heteronema" RELATED synonym [] synonym: "Cylindrocarpon mali" RELATED synonym [] synonym: "Cylindrocarpon mali var. flavum" RELATED synonym [] synonym: "Nectria galligena" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:140106 ! Neonectria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:56753 name: Butlerelfia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5304 ! Corticiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:56754 name: Butlerelfia eustacei namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:56753 ! Butlerelfia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:56757 name: Stictidaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:38074 ! Ostropales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:56879 name: Oat blue dwarf virus namespace: ncbi_taxonomy synonym: "OBDV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3048226 ! Marafivirus avenae [Term] id: NCBITaxon:569360 name: Fusarium sambucinum species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23379853 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:57119 name: Bean yellow dwarf virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10812 ! Mastrevirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57138 name: Calonectria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:57142 name: Fusarium arthrosporioides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57147 name: Fusarium merismoides namespace: ncbi_taxonomy synonym: "Fusicolla merismoides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57150 name: Fusarium stilboides namespace: ncbi_taxonomy alt_id: NCBITaxon:2773084 alt_id: NCBITaxon:57318 alt_id: NCBITaxon:57319 synonym: "Gibberella stilboides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1328926 ! Fusarium lateritium species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57161 name: Fusarium decemcellulare namespace: ncbi_taxonomy alt_id: NCBITaxon:5517 alt_id: NCBITaxon:715507 synonym: "Albonectria rigidiuscula" RELATED synonym [] synonym: "Nectria rigidiuscula" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1329916 ! Fusarium decemcellulare species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:572138 name: Pustula namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:65355 ! Albuginaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:572139 name: Pustula tragopogonis namespace: ncbi_taxonomy alt_id: NCBITaxon:136152 synonym: "Albugo tragopogonis" RELATED synonym [] synonym: "Puccinia tragopogonis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:572138 ! Pustula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:572922 name: Xyleninae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:7100 ! Noctuidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:572928 name: Phytophthora citricola III namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:573689 name: Coleosporium ipomoeae namespace: ncbi_taxonomy synonym: "Uredo ipomoeae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5300 ! Coleosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:573697 name: Puccinia pittieriana namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:574096 name: Pantoea allii namespace: ncbi_taxonomy alt_id: NCBITaxon:574095 alt_id: NCBITaxon:574097 alt_id: NCBITaxon:574098 alt_id: NCBITaxon:574099 xref: GC_ID:11 xref: PMID:20495023 is_a: NCBITaxon:53335 ! Pantoea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57459 name: Phyllactinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:574890 name: Sweet potato leaf curl Lanzarote virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:291027 ! unclassified Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:574935 name: Schizoporaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:139380 ! Hymenochaetales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:57557 name: Heterodera goettingiana namespace: ncbi_taxonomy synonym: "pea cyst nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57558 name: Heterodera zeae namespace: ncbi_taxonomy synonym: "corn cyst nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57559 name: Belonolaimidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:57560 name: Belonolaiminae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:57559 ! Belonolaimidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:57561 name: Belonolaimus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:57560 ! Belonolaiminae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:57562 name: Belonolaimus longicaudatus namespace: ncbi_taxonomy synonym: "sting nematode" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:57561 ! Belonolaimus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57577 name: Trifolium pratense namespace: ncbi_taxonomy synonym: "peavine clover" EXACT common_name [] synonym: "purple clover" EXACT common_name [] synonym: "red clover" EXACT common_name [] synonym: "rotklee" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:3898 ! Trifolium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:57729 name: Alternaria sect. Embellisia namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:24014900 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:section [Term] id: NCBITaxon:5789 name: Physariida namespace: ncbi_taxonomy synonym: "Physarales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:137627 ! Myxogastromycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:5790 name: Physarum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1115744 ! Physaraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:58019 name: Pinopsida namespace: ncbi_taxonomy synonym: "Coniferopsida" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1437180 ! Acrogymnospermae property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:58023 name: Tracheophyta namespace: ncbi_taxonomy synonym: "vascular plants" EXACT common_name [] synonym: "vascular plants" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:3193 ! Embryophyta property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:58024 name: Spermatophyta namespace: ncbi_taxonomy synonym: "seed plants" EXACT common_name [] synonym: "seed plants" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:78536 ! Euphyllophyta property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:58127 name: Helminthosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:290882 ! Massarinaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:58128 name: Helminthosporium solani namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:58127 ! Helminthosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:58291 name: Rhizopus microsporus namespace: ncbi_taxonomy alt_id: NCBITaxon:86633 synonym: "Rhizopus rhizopodiformis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4842 ! Rhizopus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:58368 name: Chondrostereum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:139264 ! Cyphellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:58369 name: Chondrostereum purpureum namespace: ncbi_taxonomy synonym: "Stereum purpureum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:58368 ! Chondrostereum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:590091 name: Ganoderma lucidum/Ganoderma lucidum fusant namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2624939 ! unclassified Ganoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:590403 name: Red clover vein mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:591395 name: Dianthus sp. cdK73 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2635461 ! unclassified Dianthus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:593266 name: Monilochaetes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1028385 ! Australiascaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:593267 name: Monilochaetes infuscans namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:593266 ! Monilochaetes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:593572 name: Broad bean stain virus namespace: ncbi_taxonomy synonym: "BBSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:3047699 ! Comovirus viciae [Term] id: NCBITaxon:59380 name: Rice yellow stunt nucleorhabdovirus namespace: ncbi_taxonomy alt_id: NCBITaxon:31720 alt_id: NCBITaxon:46013 synonym: "rice transitory yellowing virus" EXACT equivalent_name [] synonym: "rice yellow stunt rhabdovirus" EXACT equivalent_name [] synonym: "Rice yellow stunt virus" EXACT equivalent_name [] synonym: "RTYV" BROAD acronym [] synonym: "RYSV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:2953674 ! Alphanucleorhabdovirus oryzae [Term] id: NCBITaxon:594596 name: Monographella nivalis var. nivalis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:101483 ! Monographella nivalis property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:59500 name: Rice necrosis mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39731 ! Bymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:59585 name: Corynespora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:281124 ! Corynesporascaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:59586 name: Corynespora cassiicola namespace: ncbi_taxonomy alt_id: NCBITaxon:1962294 synonym: "Helminthosporium cassiicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:59585 ! Corynespora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:59737 name: Rathayibacter iranicus namespace: ncbi_taxonomy synonym: "Clavibacter iranicum" RELATED synonym [] synonym: "Clavibacter iranicus" RELATED synonym [] synonym: "Corynebacterium iranicum" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:33886 ! Rathayibacter property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:59747 name: Meloidogyne chitwoodi namespace: ncbi_taxonomy alt_id: NCBITaxon:188752 xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:59973 name: Cyclamen namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4335 ! Primulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:599737 name: Wickerhamomyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:115784 ! Phaffomycetaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:60186 name: Rhizophydium namespace: ncbi_taxonomy alt_id: NCBITaxon:117823 xref: GC_ID:1 xref: PMID:16919432 is_a: NCBITaxon:451449 ! Rhizophydiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:60201 name: Chrysomyxa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:106328 ! Coleosporiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:60204 name: Pucciniastrum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:73249 ! Pucciniastraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:603839 name: Crinipellis aff. iopus JFK-2009a namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34446 ! Crinipellis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:60456 name: Iris yellow spot virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3052577 ! Orthotospovirus iridimaculaflavi [Term] id: NCBITaxon:60494 name: Mycoleptodiscus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1866852 ! Muyocopronaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:60495 name: Mycoleptodiscus terrestris namespace: ncbi_taxonomy synonym: "Leptodiscus terrestris" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:60494 ! Mycoleptodiscus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:60496 name: Thielaviopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1028423 ! Ceratocystidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:6072 name: Eumetazoa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33208 ! Metazoa property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:611301 name: Xanthomonas citri pv. citri namespace: ncbi_taxonomy alt_id: NCBITaxon:434928 synonym: "Xanthomonas campestris pv. citri" RELATED in_part [] synonym: "Xanthomonas campestris pv. Citri (A group)" RELATED synonym [] synonym: "Xanthomonas citri subsp. citri" RELATED synonym [] synonym: "Xanthomonas smithii subsp. citri" RELATED synonym [] synonym: "Xanthomonas smithii subsp. citri pv. citri" RELATED synonym [] xref: GC_ID:11 xref: PMID:16104350 xref: PMID:17183629 xref: PMID:17473228 is_a: NCBITaxon:346 ! Xanthomonas citri [Term] id: NCBITaxon:61186 name: Monilinia laxa namespace: ncbi_taxonomy synonym: "Monilia laxa" RELATED synonym [] synonym: "Oidium laxum" RELATED synonym [] synonym: "Sclerotinia laxa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:38447 ! Monilinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:61214 name: Monilinia azaleae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:38447 ! Monilinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:61235 name: Fusarium equiseti namespace: ncbi_taxonomy alt_id: NCBITaxon:1755128 alt_id: NCBITaxon:2057813 alt_id: NCBITaxon:453796 alt_id: NCBITaxon:473845 alt_id: NCBITaxon:473846 alt_id: NCBITaxon:473847 alt_id: NCBITaxon:5522 alt_id: NCBITaxon:709517 synonym: "Gibberella intricans" RELATED synonym [] synonym: "Selenosporium equiseti" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:450425 ! Fusarium incarnatum-equiseti species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:61284 name: Fusarium tricinctum namespace: ncbi_taxonomy alt_id: NCBITaxon:1116837 alt_id: NCBITaxon:1354371 alt_id: NCBITaxon:388089 alt_id: NCBITaxon:502710 alt_id: NCBITaxon:502711 alt_id: NCBITaxon:502712 alt_id: NCBITaxon:502713 alt_id: NCBITaxon:502714 synonym: "Gibberella tricincta" RELATED synonym [] synonym: "Selenosporium tricinctum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:679429 ! Fusarium tricinctum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:619225 name: Macroposthoniinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211168 ! Criconematidae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:61985 name: Myriapoda namespace: ncbi_taxonomy synonym: "Atelocerata" RELATED in_part [] synonym: "myriapods" EXACT common_name [] synonym: "Tracheata" RELATED in_part [] synonym: "Uniramia" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:197563 ! Mandibulata property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:62004 name: Glomerida namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:118560 ! Pentazonia property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:62133 name: Capnodiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:91371 xref: GC_ID:1 is_a: NCBITaxon:134362 ! Capnodiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:62134 name: Capnodium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62133 ! Capnodiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:6231 name: Nematoda namespace: ncbi_taxonomy synonym: "Nemata" RELATED synonym [] synonym: "nematode" EXACT common_name [] synonym: "nematodes" EXACT common_name [] synonym: "nematodes" RELATED blast_name [] synonym: "roundworm" EXACT common_name [] synonym: "roundworms" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1206794 ! Ecdysozoa property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:623139 name: Zygotylenchus guevarai namespace: ncbi_taxonomy alt_id: NCBITaxon:191641 xref: GC_ID:1 is_a: NCBITaxon:191640 ! Zygotylenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6236 name: Rhabditida namespace: ncbi_taxonomy alt_id: NCBITaxon:33251 xref: GC_ID:1 is_a: NCBITaxon:119089 ! Chromadorea property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:62635 name: Entylomataceae namespace: ncbi_taxonomy alt_id: NCBITaxon:85576 xref: GC_ID:1 is_a: NCBITaxon:62914 ! Entylomatales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:62636 name: Entyloma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62635 ! Entylomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:62700 name: Leveillula namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:62701 name: Podosphaera namespace: ncbi_taxonomy alt_id: NCBITaxon:57463 synonym: "Sphaerotheca" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:62703 name: Oidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:62706 name: Erysiphe betae namespace: ncbi_taxonomy synonym: "Microsphaera betae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5121 ! Erysiphe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:62708 name: Golovinomyces cichoracearum namespace: ncbi_taxonomy synonym: "Erysiphe cichoracearum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:184027 ! Golovinomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:62716 name: Erysiphe polygoni namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5121 ! Erysiphe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:62718 name: Leveillula taurica namespace: ncbi_taxonomy synonym: "Erysiphe taurica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62700 ! Leveillula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:62724 name: Phyllactinia guttata namespace: ncbi_taxonomy synonym: "Alphitomorpha guttata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:57459 ! Phyllactinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:62725 name: Podosphaera clandestina namespace: ncbi_taxonomy synonym: "Alphitomorpha clandestina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62701 ! Podosphaera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:62728 name: Podosphaera pannosa namespace: ncbi_taxonomy alt_id: NCBITaxon:1961904 alt_id: NCBITaxon:1961905 alt_id: NCBITaxon:1961906 synonym: "Alphitomorpha pannosa" RELATED synonym [] synonym: "Sphaerotheca pannosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62701 ! Podosphaera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:627605 name: Xanthomonas translucens pv. pistacia namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:343 ! Xanthomonas translucens [Term] id: NCBITaxon:62913 name: Georgefischeriales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452283 ! Exobasidiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:62914 name: Entylomatales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452283 ! Exobasidiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:62916 name: Tilletiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452283 ! Exobasidiomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:62921 name: Urocystidales namespace: ncbi_taxonomy synonym: "Urocystales" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5257 ! Ustilaginomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:62924 name: Urocystidaceae namespace: ncbi_taxonomy synonym: "Urocystaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62921 ! Urocystidales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:62925 name: Glomosporiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62921 ! Urocystidales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:629395 name: Bacteria Latreille et al. 1825 namespace: ncbi_taxonomy synonym: "Bacteria" RELATED synonym [] synonym: "Bacteria stick insect" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:524136 ! Diapheromerini property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:6300 name: Tylenchina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6236 ! Rhabditida property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:6301 name: Heteroderidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33284 ! Tylenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:6303 name: Meloidogyne javanica namespace: ncbi_taxonomy synonym: "root-knot nematode" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:654580 ! Meloidogyne incognita group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6304 name: Meloidogyne arenaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:654580 ! Meloidogyne incognita group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6305 name: Meloidogyne hapla namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6306 name: Meloidogyne incognita namespace: ncbi_taxonomy alt_id: NCBITaxon:1154579 alt_id: NCBITaxon:2259537 alt_id: NCBITaxon:2259538 alt_id: NCBITaxon:493909 synonym: "Meloidogyne incognita acrita" RELATED synonym [] synonym: "southern root-knot nematode" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:654580 ! Meloidogyne incognita group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:63189 name: Ceratorhiza oryzae-sativae namespace: ncbi_taxonomy synonym: "Ceratobasidium oryzae-sativae" RELATED synonym [] synonym: "Ceratobasidium sativae" RELATED synonym [] synonym: "Ceratobasidium sativae" RELATED teleomorph [] synonym: "Rhizoctonia oryzae-sativae" RELATED synonym [] synonym: "Sclerotium oryzae-sativae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:125628 ! Ceratorhiza property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:63190 name: Waitea circinata namespace: ncbi_taxonomy alt_id: NCBITaxon:459363 alt_id: NCBITaxon:459364 alt_id: NCBITaxon:49569 alt_id: NCBITaxon:531829 synonym: "Rhizoctonia oryzae Ryker & Gooch, 1938" RELATED synonym [] synonym: "Rhizoctonia zeae" RELATED synonym [] synonym: "Waitea circinata var. circinata" RELATED synonym [] synonym: "Waitea circinata var. oryzae Toda, Mushika, T. Hayak., Tanaka, Tani & Hyakum., 2005" EXACT equivalent_name [] synonym: "Waitea circinata var. zeae Toda, Mushika, T. Hayak., Tanaka, Tani & Hyakum., 2005" EXACT equivalent_name [] xref: GC_ID:1 xref: PMID:28410009 is_a: NCBITaxon:63236 ! Waitea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:63196 name: Lepteutypa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:54958 ! Amphisphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:63205 name: Pestalotia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:54958 ! Amphisphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:63236 name: Waitea namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:5304 ! Corticiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:6324 name: Bursaphelenchus namespace: ncbi_taxonomy synonym: "pine wood nematodes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:33823 ! Aphelenchoididae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:63265 name: Sporisorium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5268 ! Ustilaginaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:63266 name: Thecaphora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:62925 ! Glomosporiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:63269 name: Urocystis namespace: ncbi_taxonomy synonym: "Urocystis" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:62924 ! Urocystidaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:63393 name: Urocystis colchici namespace: ncbi_taxonomy synonym: "Caeoma colchici" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:63269 ! Urocystis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:634054 name: Scutellonema cavenessi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:229470 ! Scutellonema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:639021 name: Magnaporthales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:222544 ! Sordariomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:640623 name: Aveninae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1652080 ! Poeae Chloroplast Group 1 (Aveneae type) property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:640742 name: Pestalotiopsis aff. palmarum PP81 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37840 ! Pestalotiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:64187 name: Xanthomonas oryzae pv. oryzae namespace: ncbi_taxonomy synonym: "Xanthomonas campestris pv. oryza" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:347 ! Xanthomonas oryzae [Term] id: NCBITaxon:643453 name: Xanthomonas citri group namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:338 ! Xanthomonas property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:644614 name: Stemphylium sp. dzdj5 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2645090 ! unclassified Stemphylium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6447 name: Mollusca namespace: ncbi_taxonomy synonym: "molluscs" EXACT common_name [] synonym: "molluscs" RELATED blast_name [] synonym: "mollusks" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1206795 ! Lophotrochozoa property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:6448 name: Gastropoda namespace: ncbi_taxonomy synonym: "gastropods" EXACT genbank_common_name [] synonym: "gastropods" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:6447 ! Mollusca property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:64493 name: Mucor hiemalis namespace: ncbi_taxonomy alt_id: NCBITaxon:1081915 alt_id: NCBITaxon:319164 synonym: "Mucor sp. heimalis" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:4830 ! Mucor property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:64495 name: Rhizopus arrhizus namespace: ncbi_taxonomy alt_id: NCBITaxon:126589 alt_id: NCBITaxon:1810496 alt_id: NCBITaxon:2072830 alt_id: NCBITaxon:29925 alt_id: NCBITaxon:4845 synonym: "Rhizopus arrhizus var. arrhizus" RELATED synonym [] synonym: "Rhizopus arrhizus var. tonkinensis" RELATED synonym [] synonym: "Rhizopus chiuniang" RELATED synonym [] synonym: "Rhizopus formosaensis" RELATED synonym [] synonym: "Rhizopus hangchow" RELATED synonym [] synonym: "Rhizopus hangchow M. Yamaz., 1918" RELATED synonym [] synonym: "Rhizopus javanicus" RELATED synonym [] synonym: "Rhizopus liquefaciens" RELATED synonym [] synonym: "Rhizopus oryzae" RELATED synonym [] synonym: "Rhizopus oryzae Went & Prins. Geerl., 1895" RELATED synonym [] synonym: "Rhizopus peka" RELATED synonym [] synonym: "Rhizopus pseudochinensis" RELATED synonym [] synonym: "Rhizopus suinus" RELATED synonym [] synonym: "Rhizopus tamari" RELATED synonym [] synonym: "Rhizopus thermosus" RELATED synonym [] synonym: "Rhizopus tonkinensis" RELATED synonym [] synonym: "Rhizopus tritici" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4842 ! Rhizopus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:64497 name: Sydowia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:64899 ! Dothioraceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:64498 name: Choanephora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1344962 ! Choanephoroideae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:64499 name: Sydowia polyspora namespace: ncbi_taxonomy alt_id: NCBITaxon:184810 alt_id: NCBITaxon:46636 alt_id: NCBITaxon:93471 synonym: "Dothichiza pityophila" RELATED synonym [] synonym: "Dothidea polyspora" RELATED synonym [] synonym: "Hormonema dematioides" RELATED synonym [] synonym: "Hormonema dematioides (synanamorph)" RELATED synonym [] synonym: "Sclerophoma pityophila" RELATED synonym [] synonym: "Sclerophoma pityophila (synanamorph)" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:64497 ! Sydowia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:64609 name: Ilyonectria destructans namespace: ncbi_taxonomy alt_id: NCBITaxon:147875 alt_id: NCBITaxon:1576467 alt_id: NCBITaxon:1955097 alt_id: NCBITaxon:40608 alt_id: NCBITaxon:416318 alt_id: NCBITaxon:70744 synonym: "Cylindrocarpon destructans" RELATED synonym [] synonym: "Cylindrocarpon destructans var. destructans" RELATED synonym [] synonym: "Cylindrocarpon radicicola" RELATED synonym [] synonym: "Cylindrocarpon radicicola Wollenw., 1924" RELATED synonym [] synonym: "Ilyonectria radicicola" RELATED synonym [] synonym: "Nectria radicicola" RELATED synonym [] synonym: "Neonectria radicicola" RELATED synonym [] synonym: "Neonectria radicicola var. radicicola" RELATED synonym [] synonym: "Ramularia destructans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1079112 ! Ilyonectria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:64630 name: Mariannaea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:110618 ! Nectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:646503 name: Marasmius aff. leoninus TYS 423 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34448 ! Marasmius property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:64899 name: Dothioraceae namespace: ncbi_taxonomy alt_id: NCBITaxon:125204 synonym: "anamorphic Dothioraceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5014 ! Dothideales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:64948 name: Ilarvirus subgroup 1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:64950 name: Ilarvirus subgroup 3 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12316 ! Ilarvirus property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:65069 name: Pythium acanthicum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:65070 name: Pythium aphanidermatum namespace: ncbi_taxonomy synonym: "Rheosporangium aphanidermatum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:652030 name: Uromyces ciceris-arietini namespace: ncbi_taxonomy synonym: "Caeomurus ciceris-arientini" RELATED synonym [] synonym: "Uredo ciceris-arietini" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5263 ! Uromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6527 name: Stylommatophora namespace: ncbi_taxonomy synonym: "land snails" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:120490 ! Eupulmonata property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:652717 name: Sweet potato leaf curl Spain virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:291027 ! unclassified Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:652718 name: Sweet potato leaf curl Canary virus namespace: ncbi_taxonomy alt_id: NCBITaxon:575536 synonym: "Sweet potato leaf curl Canary Island virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:65355 name: Albuginaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:370421 ! Albuginales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:65356 name: Albugo namespace: ncbi_taxonomy alt_id: NCBITaxon:1154644 xref: GC_ID:1 is_a: NCBITaxon:65355 ! Albuginaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:65357 name: Albugo candida namespace: ncbi_taxonomy synonym: "Aecidium candidum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:65356 ! Albugo property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:653685 name: Bacillus subtilis group namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:17684269 xref: PMID:19622642 xref: PMID:23475340 is_a: NCBITaxon:1386 ! Bacillus property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:654128 name: Marasmiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:654221 xref: GC_ID:1 is_a: NCBITaxon:2982316 ! Marasmiineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:6544 name: Bivalvia namespace: ncbi_taxonomy synonym: "bivalves" EXACT genbank_common_name [] synonym: "bivalves" RELATED blast_name [] synonym: "Lamellibranchiata" RELATED synonym [] synonym: "Pelecypoda" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:6447 ! Mollusca property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:654435 name: Armillaria aff. mellea 386-102 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:47424 ! Armillaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:654482 name: Neofavolus aff. alveolaris 249-539 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1260783 ! Neofavolus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:654494 name: Stereum aff. gausapatum 254-285 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5644 ! Stereum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6545 name: Pteriomorphia namespace: ncbi_taxonomy synonym: "Pteriomorpha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2785011 ! Autobranchia property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:654580 name: Meloidogyne incognita group namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:65467 name: Cherry green ring mottle virus namespace: ncbi_taxonomy synonym: "CGRMV" BROAD acronym [] synonym: "cherry green ring mottle foveavirus" EXACT equivalent_name [] synonym: "sour cherry green ring mottle virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1914299 ! Robigovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:65700 name: Erwinia tracheiphila namespace: ncbi_taxonomy synonym: "Bacillus tracheiphilus" RELATED synonym [] synonym: "Bacterium tracheiphilus" RELATED synonym [] synonym: "Erwinia amylovora var. tracheiphila" RELATED synonym [] xref: GC_ID:11 xref: PMID:9779605 is_a: NCBITaxon:551 ! Erwinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:65954 name: Globodera tabacum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:31242 ! Globodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:660128 name: Calceolaria crenatiflora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:86658 ! Calceolaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:660627 name: Brassica rapa (Nippo-oleifera Group) namespace: ncbi_taxonomy synonym: "Brassica rapa var. nippo-oleifera" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:145471 ! Brassica rapa subsp. oleifera [Term] id: NCBITaxon:66099 name: Ovulinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:66100 name: Ovulinia azaleae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:66099 ! Ovulinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:66101 name: Stromatinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28983 ! Sclerotiniaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:66266 name: Rice grassy stunt tenuivirus synonym: "RGSV" BROAD acronym [] synonym: "Rice grassy stunt virus" EXACT equivalent_name [] is_a: NCBITaxon:12329 ! Tenuivirus [Term] id: NCBITaxon:66269 name: Pantoea stewartii namespace: ncbi_taxonomy alt_id: NCBITaxon:1411611 alt_id: NCBITaxon:1411616 xref: GC_ID:11 is_a: NCBITaxon:53335 ! Pantoea property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:66271 name: Pantoea stewartii subsp. stewartii namespace: ncbi_taxonomy alt_id: NCBITaxon:559 synonym: "Aplanobacter stawarti" RELATED synonym [] synonym: "Bacterium stewarti" RELATED synonym [] synonym: "Erwinia stewartii" RELATED synonym [] synonym: "Phytomonas stewarti" RELATED synonym [] synonym: "Pseudobacterium stewarti" RELATED synonym [] synonym: "Pseudomonas stewarti" RELATED synonym [] synonym: "Xanthomonas stewarti" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:66269 ! Pantoea stewartii property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:66275 name: Meliolales namespace: ncbi_taxonomy synonym: "Plectomycetes" RELATED in_part [] synonym: "Pyrenomycetes" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:147551 ! Sordariomycetes incertae sedis property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:66276 name: Meliolaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:66275 ! Meliolales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:66277 name: Meliola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:66276 ! Meliolaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:66503 name: Rhabdocline namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1971362 ! Cenangiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:66505 name: Rhabdocline pseudotsugae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:66503 ! Rhabdocline property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:665078 name: Sclerotinia minor W1 UF-93 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:38451 ! Sclerotinia minor property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:66508 name: Rhabdocline weirii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:66503 ! Rhabdocline property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:66516 name: Phacidiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:221899 synonym: "Bulgariaceae" RELATED synonym [] xref: GC_ID:1 xref: PMID:25734027 is_a: NCBITaxon:1484953 ! Phacidiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:6656 name: Arthropoda namespace: ncbi_taxonomy synonym: "arthropods" EXACT genbank_common_name [] synonym: "arthropods" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:88770 ! Panarthropoda property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:6657 name: Crustacea namespace: ncbi_taxonomy synonym: "crustaceans" EXACT genbank_common_name [] synonym: "crustaceans" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:197562 ! Pancrustacea property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:666804 name: Melampsora sp. hyb24-2-1 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2629660 ! unclassified Melampsora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:66735 name: Diplodia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:66737 name: Sphaeropsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:66739 name: Lasiodiplodia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:6681 name: Malacostraca namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2172821 ! Multicrustacea property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:6682 name: Eucarida namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:72041 ! Eumalacostraca property_value: has_rank NCBITaxon:superorder [Term] id: NCBITaxon:668250 name: Hypoxylon sp. agrAR132 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2614581 ! unclassified Hypoxylon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:668254 name: Rosellinia sp. agrAR164 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2646176 ! unclassified Rosellinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:668271 name: Cladosporium sp. agrAR204 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2614628 ! unclassified Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:668273 name: Xylaria sp. agrAR229 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2604348 ! unclassified Xylaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6683 name: Decapoda namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6682 ! Eucarida property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:668547 name: Teratosphaeriaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1034721 xref: GC_ID:1 is_a: NCBITaxon:2726947 ! Mycosphaerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:6692 name: Pleocyemata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6683 ! Decapoda property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:675063 name: Tymovirales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732461 ! Alsuviricetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:675064 name: Alphaflexiviridae namespace: ncbi_taxonomy synonym: "Flexiviridae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:675063 ! Tymovirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:675068 name: Betaflexiviridae namespace: ncbi_taxonomy synonym: "Flexiviridae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:675063 ! Tymovirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:675071 name: Virgaviridae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2732544 ! Martellivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:675072 name: Secoviridae namespace: ncbi_taxonomy alt_id: NCBITaxon:39728 xref: GC_ID:1 is_a: NCBITaxon:464095 ! Picornavirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:675075 name: Comovirinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:675072 ! Secoviridae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:6752 name: Brachyura namespace: ncbi_taxonomy synonym: "short-tailed crabs" EXACT genbank_common_name [] synonym: "true crabs" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:6692 ! Pleocyemata property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:675845 name: Emaravirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1980412 ! Fimoviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:67594 name: Phytophthora syringae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4783 ! Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:67606 name: Drechslera sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2634127 ! unclassified Drechslera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:67608 name: Microdochium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1682405 ! Microdochiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:67620 name: Graphium penicillioides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1503932 ! Graphium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:67753 name: Crinivirus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:69973 ! Closteroviridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:67761 name: Cowpea mild mottle virus namespace: ncbi_taxonomy synonym: "CPMMV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:12163 ! Carlavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:67762 name: Tobacco leaf curl virus namespace: ncbi_taxonomy synonym: "TbLCV" BROAD acronym [] synonym: "tobacco leaf curl geminivirus" EXACT equivalent_name [] synonym: "tobacco leafcurl virus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:291027 ! unclassified Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:679429 name: Fusarium tricinctum species complex namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:23379853 is_a: NCBITaxon:5506 ! Fusarium property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:680198 name: Streptomyces scabiei 87.22 namespace: ncbi_taxonomy synonym: "Streptomyces scabiei str. 87.22" EXACT equivalent_name [] synonym: "Streptomyces scabiei strain 87.22" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:1930 ! Streptomyces scabiei property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:6804 name: Majoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:116706 ! Heterotremata property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:681950 name: Glomerellaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:681951 xref: GC_ID:1 is_a: NCBITaxon:1028384 ! Glomerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:683158 name: Didymellaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1069084 xref: GC_ID:1 is_a: NCBITaxon:715340 ! Pleosporineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:683375 name: Podosphaera macularis namespace: ncbi_taxonomy alt_id: NCBITaxon:180121 synonym: "Alphitomorpha macularis" RELATED synonym [] synonym: "Erysiphe humuli" RELATED synonym [] synonym: "Sphaerotheca humuli" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62701 ! Podosphaera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6843 name: Chelicerata namespace: ncbi_taxonomy synonym: "chelicerates" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:6656 ! Arthropoda property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:684837 name: Puccinia polysora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6854 name: Arachnida namespace: ncbi_taxonomy synonym: "arachnids" EXACT genbank_common_name [] synonym: "arachnids" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:6843 ! Chelicerata property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:68767 name: Gloeocystidiellaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452342 ! Russulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:68768 name: Gloeocystidiellum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:68767 ! Gloeocystidiellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:68781 name: Lachnocladiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452342 ! Russulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:687958 name: Passalora vaginae namespace: ncbi_taxonomy alt_id: NCBITaxon:131315 synonym: "Cercospora vaginae" RELATED synonym [] synonym: "Mycovellosiella vaginae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131316 ! Passalora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:68802 name: Hyphodontia namespace: ncbi_taxonomy alt_id: NCBITaxon:27341 xref: GC_ID:1 is_a: NCBITaxon:574935 ! Schizoporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:68808 name: Typhulaceae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:2983527 ! Pleurotineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:68809 name: Typhula namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:68808 ! Typhulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:68872 name: Striga hermonthica namespace: ncbi_taxonomy synonym: "purple witchweed" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:4169 ! Striga property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:689831 name: Spinareovirinae is_a: NCBITaxon:10880 ! Reoviridae [Term] id: NCBITaxon:689832 name: Sedoreovirinae is_a: NCBITaxon:10880 ! Reoviridae [Term] id: NCBITaxon:690354 name: Tyromyces aff. chioneus 248-847 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:83249 ! Tyromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:692069 name: Falcon aviadenovirus A namespace: ncbi_taxonomy synonym: "Falcon adenovirus A" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10552 ! Aviadenovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:69219 name: Enterobacter cloacae subsp. dissolvens namespace: ncbi_taxonomy alt_id: NCBITaxon:1659712 synonym: "Aerobacter dissolvens" RELATED synonym [] synonym: "Aplanobacter dissolvens" RELATED synonym [] synonym: "Bacterium dissolvens" RELATED synonym [] synonym: "Enterobacter dissolvens" RELATED synonym [] synonym: "Erwinia dissolvens" RELATED synonym [] synonym: "Phytomonas dissolvens" RELATED synonym [] synonym: "Pseudomonas dissolvens" RELATED synonym [] xref: GC_ID:11 xref: PMID:15900966 xref: PMID:16014455 xref: PMID:3711302 is_a: NCBITaxon:550 ! Enterobacter cloacae property_value: has_rank NCBITaxon:subspecies [Term] id: NCBITaxon:69220 name: Lelliottia nimipressuralis namespace: ncbi_taxonomy synonym: "Enterobacter nimipressuralis" RELATED synonym [] synonym: "Erwinia nimipressuralis" RELATED synonym [] xref: GC_ID:11 xref: PMID:23632228 xref: PMID:3711302 is_a: NCBITaxon:1330545 ! Lelliottia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:69324 name: Gossypium hirsutum/Verticillium dahliae mixed EST library namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119167 ! mixed EST libraries property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6933 name: Acari namespace: ncbi_taxonomy synonym: "Acarina" RELATED synonym [] synonym: "mites & ticks" RELATED blast_name [] synonym: "mites and ticks" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:6854 ! Arachnida property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:69361 name: Typhula ishikariensis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:68809 ! Typhula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6946 name: Acariformes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6933 ! Acari property_value: has_rank NCBITaxon:superorder [Term] id: NCBITaxon:6947 name: Prostigmata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:83136 ! Trombidiformes property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:69478 name: Erysiphe cruciferarum namespace: ncbi_taxonomy alt_id: NCBITaxon:1571588 xref: GC_ID:1 is_a: NCBITaxon:5121 ! Erysiphe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:6960 name: Hexapoda namespace: ncbi_taxonomy synonym: "Atelocerata" RELATED in_part [] synonym: "hexapods" RELATED blast_name [] synonym: "insects" EXACT genbank_common_name [] synonym: "insects" RELATED blast_name [] synonym: "Tracheata" RELATED in_part [] synonym: "Uniramia" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:197562 ! Pancrustacea property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:69781 name: Penicillium oxalicum namespace: ncbi_taxonomy alt_id: NCBITaxon:1506159 alt_id: NCBITaxon:1661384 synonym: "Penicillium asturianum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5073 ! Penicillium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:697945 name: Cercospora beticola 303B namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:122368 ! Cercospora beticola property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:698759 name: Streptomyces ipomoeae 91-03 namespace: ncbi_taxonomy synonym: "Streptomyces ipomoeae str. 91-03" EXACT equivalent_name [] synonym: "Streptomyces ipomoeae strain 91-03" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:103232 ! Streptomyces ipomoeae property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:698760 name: Streptomyces turgidiscabies Car8 namespace: ncbi_taxonomy synonym: "Streptomyces turgidiscabies str. Car8" EXACT equivalent_name [] synonym: "Streptomyces turgidiscabies strain Car8" EXACT equivalent_name [] xref: GC_ID:11 is_a: NCBITaxon:85558 ! Streptomyces turgidiscabies property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:69973 name: Closteroviridae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:11701845 is_a: NCBITaxon:2732544 ! Martellivirales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:701155 name: Chaetosphaeriales incertae sedis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:261460 ! Chaetosphaeriales [Term] id: NCBITaxon:70185 name: Spongospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37358 ! Plasmodiophoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:70186 name: Spongospora subterranea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70185 ! Spongospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:70187 name: Olpidiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2202808 ! Olpidiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:70188 name: Olpidium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70187 ! Olpidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:70189 name: Olpidium brassicae namespace: ncbi_taxonomy synonym: "Chytridium brassicae" RELATED synonym [] synonym: "Olpidiaster brassicae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:70188 ! Olpidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7020 name: Phasmatodea namespace: ncbi_taxonomy synonym: "Phasmida" RELATED synonym [] synonym: "stick insects" EXACT common_name [] synonym: "walking sticks" EXACT genbank_common_name [] synonym: "walking sticks" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:33341 ! Polyneoptera property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:70223 name: Xiphinema rivesi namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46002 ! Xiphinema property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:70224 name: Aphelenchidae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:120862 ! Aphelenchoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:70225 name: Aphelenchus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70224 ! Aphelenchidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:70226 name: Aphelenchus avenae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70225 ! Aphelenchus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:70230 name: Longidorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:46001 ! Longidoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:70236 name: Paratrichodorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211187 ! Trichodoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:70243 name: Trichodorus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211187 ! Trichodoridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:70320 name: Eriophyidae namespace: ncbi_taxonomy synonym: "gall mites" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:70332 ! Eriophyoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:703248 name: Allieae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40553 ! Allioideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:70332 name: Eriophyoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:83139 ! Eupodina property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:703533 name: Asparagoideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40552 ! Asparagaceae property_value: has_rank NCBITaxon:subfamily [Term] id: NCBITaxon:7036 name: Aleyrodidae namespace: ncbi_taxonomy synonym: "whiteflies" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:33377 ! Aleyrodoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:7037 name: Bemisia namespace: ncbi_taxonomy alt_id: NCBITaxon:398008 synonym: "Lipaleyrodes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33379 ! Aleyrodinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:7038 name: Bemisia tabaci namespace: ncbi_taxonomy synonym: "Aleurodes tabaci" RELATED synonym [] synonym: "Aleyrodes tabaci" RELATED synonym [] synonym: "sweet potato whitefly" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:7037 ! Bemisia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:706553 name: Cercospora janseana name: Passalora janseana namespace: ncbi_taxonomy alt_id: NCBITaxon:237189 synonym: "Cercospora janseana" RELATED synonym [] synonym: "Cercospora oryzae" RELATED genbank_synonym [] synonym: "Cercospora oryzae" RELATED synonym [] synonym: "Napicladium janseanum" RELATED synonym [] synonym: "Passalora janseana" RELATED synonym [] synonym: "Sphaerulina oryzina" RELATED synonym [] synonym: "Sphaerulina oryzina" RELATED teleomorph [] xref: GC_ID:1 is_a: NCBITaxon:131316 ! Passalora is_a: NCBITaxon:29002 ! Cercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:70735 name: Wheat mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1086556 ! unclassified Emaravirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:70742 name: Peronospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4777 ! Peronosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:70743 name: Peronospora sparsa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:707628 name: Tripospermum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1508183 ! Neodevriesiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:7088 name: Lepidoptera namespace: ncbi_taxonomy synonym: "butterflies and moths" EXACT genbank_common_name [] synonym: "moths" EXACT common_name [] synonym: "moths" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:85604 ! Amphiesmenoptera property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:70973 name: Medicago ruthenica namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3877 ! Medicago property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:709942 name: Phaseolus vulgaris/Colletotrichum lindemuthianum mixed EST library namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119167 ! mixed EST libraries property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7100 name: Noctuidae namespace: ncbi_taxonomy synonym: "noctuid moths" EXACT common_name [] synonym: "owlet moths" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:37570 ! Noctuoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:71186 name: Tomato leaf curl Sinaloa virus namespace: ncbi_taxonomy synonym: "Sinaloa tomato leaf curl geminivirus" EXACT equivalent_name [] synonym: "Sinaloa tomato leaf curl virus" EXACT equivalent_name [] synonym: "STLCV" BROAD acronym [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:71239 name: Cucurbitales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:91835 ! fabids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:71240 name: eudicotyledons namespace: ncbi_taxonomy alt_id: NCBITaxon:3399 synonym: "dicots" RELATED in_part [] synonym: "Dicotyledoneae" RELATED in_part [] synonym: "dicotyledons" RELATED in_part [] synonym: "eudicots" RELATED blast_name [] xref: GC_ID:1 xref: PMID:25249442 xref: PMID:26724406 is_a: NCBITaxon:1437183 ! Mesangiospermae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:71274 name: asterids namespace: ncbi_taxonomy synonym: "Asteridae" EXACT equivalent_name [] xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:1437201 ! Pentapetalae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:71275 name: rosids namespace: ncbi_taxonomy synonym: "Rosidae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:1437201 ! Pentapetalae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:7143 name: Papilionidae namespace: ncbi_taxonomy synonym: "swallowtail butterflies" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:37572 ! Papilionoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:714593 name: Strigulaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1824641 ! Strigulales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:714880 name: Alternaria padwickii namespace: ncbi_taxonomy synonym: "Trichoconis padwickii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5598 ! Alternaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:715340 name: Pleosporineae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:92860 ! Pleosporales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:715496 name: Morosphaeriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1255046 ! Massarineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:715962 name: dothideomyceta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:716546 ! leotiomyceta property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:715989 name: sordariomyceta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:716546 ! leotiomyceta property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:716545 name: saccharomyceta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4890 ! Ascomycota property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:716546 name: leotiomyceta namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:147538 ! Pezizomycotina property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:71655 name: Brenneria namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:11155980 xref: PMID:21890733 xref: PMID:24917366 xref: PMID:9779605 is_a: NCBITaxon:1903410 ! Pectobacteriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:716656 name: Sydowiellaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:71801 name: Meloidogyne fallax namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:189290 ! Meloidogyne property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:71896 name: Marasmiellus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:72117 ! Omphalotaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:71922 name: Xeromphalina namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:230759 ! Agaricales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:71934 name: Entolomataceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2982303 ! Tricholomatineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:71935 name: Clitopilus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:71934 ! Entolomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:71936 name: Clitopilus prunulus namespace: ncbi_taxonomy synonym: "Agaricus prunulus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:71935 ! Clitopilus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:72025 name: Fabales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:91835 ! fabids property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:72041 name: Eumalacostraca namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6681 ! Malacostraca property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:72117 name: Omphalotaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2982316 ! Marasmiineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:721789 name: Potentilleae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:171638 ! Rosoideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:721805 name: Amygdaleae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:171637 ! Amygdaloideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:721813 name: Maleae namespace: ncbi_taxonomy alt_id: NCBITaxon:721812 synonym: "Pyreae" RELATED synonym [] synonym: "Pyrodae" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:171637 ! Amygdaloideae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:721947 name: Amylocorticiales namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:452333 ! Agaricomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:721957 name: Amylocorticiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:721947 ! Amylocorticiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:72274 name: Pseudomonadales namespace: ncbi_taxonomy synonym: "gamma-3 proteobacteria" RELATED in_part [] synonym: "Pseudomonaceae/Moraxellaceae group" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:1236 ! Gammaproteobacteria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:72558 name: Sporisorium reilianum namespace: ncbi_taxonomy alt_id: NCBITaxon:2072835 synonym: "Cintractia reiliana" RELATED synonym [] synonym: "Sorosporium reilianum" RELATED synonym [] synonym: "Sphacelotheca reiliana" RELATED synonym [] synonym: "Ustilago reiliana" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:63265 ! Sporisorium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:72984 name: Ceratostomataceae namespace: ncbi_taxonomy alt_id: NCBITaxon:152791 alt_id: NCBITaxon:40614 xref: GC_ID:1 is_a: NCBITaxon:252166 ! Coronophorales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:72997 name: Xenodidymella applanata namespace: ncbi_taxonomy synonym: "Didymella applanata" RELATED synonym [] synonym: "Didymosphaeria applanata" RELATED synonym [] synonym: "Phoma argillacea" RELATED synonym [] synonym: "Phyllosticta argillacea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1770253 ! Xenodidymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:73001 name: Phoma herbarum namespace: ncbi_taxonomy alt_id: NCBITaxon:1339691 alt_id: NCBITaxon:1770247 alt_id: NCBITaxon:1772000 alt_id: NCBITaxon:1858584 alt_id: NCBITaxon:573127 synonym: "Atradidymella muscivora" RELATED synonym [] synonym: "Phoma dutchum" RELATED synonym [] synonym: "Phoma muscivora" RELATED synonym [] synonym: "Phoma neerlandica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37463 ! Phoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:73002 name: Didymella macrostoma namespace: ncbi_taxonomy alt_id: NCBITaxon:1770259 alt_id: NCBITaxon:381709 alt_id: NCBITaxon:381710 synonym: "Phoma macrostoma" RELATED synonym [] synonym: "Phoma macrostoma var. incolorata" RELATED synonym [] synonym: "Phoma macrostoma var. macrostoma" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:73004 name: Phomatodes nebulosa namespace: ncbi_taxonomy synonym: "Phoma nebulosa" RELATED synonym [] synonym: "Sphaeria nebulosa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1770251 ! Phomatodes property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:73124 name: Endothia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:218105 ! Cryphonectria-Endothia species complex property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:73147 name: Oat sterile dwarf virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10988 ! Fijivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:73163 name: Aecidium namespace: ncbi_taxonomy synonym: "mitosporic Pucciniales" RELATED in_part [] xref: GC_ID:1 is_a: NCBITaxon:190595 ! Pucciniales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:73169 name: Physopella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:190595 ! Pucciniales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:73249 name: Pucciniastraceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5258 ! Pucciniales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:73496 name: Asparagales namespace: ncbi_taxonomy alt_id: NCBITaxon:4745 synonym: "Liliales/Asparagales group" RELATED in_part [] synonym: "Liliiflorae" RELATED in_part [] xref: GC_ID:1 xref: PMID:26350789 is_a: NCBITaxon:1437197 ! Petrosaviidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:73819 name: Andean potato latent virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3047360 ! Tymovirus latandigenum [Term] id: NCBITaxon:7399 name: Hymenoptera namespace: ncbi_taxonomy alt_id: NCBITaxon:27522 alt_id: NCBITaxon:27527 alt_id: NCBITaxon:27531 synonym: "hymenopterans" EXACT common_name [] synonym: "hymenopterans" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:33392 ! Endopterygota property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:7400 name: Apocrita namespace: ncbi_taxonomy synonym: "wasps, ants & bees" EXACT genbank_common_name [] synonym: "wasps, ants & bees" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:7399 ! Hymenoptera property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:742011 name: Centaureinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102818 ! Cardueae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:742164 name: Physarum nudum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5790 ! Physarum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7434 name: Aculeata namespace: ncbi_taxonomy synonym: "Aculeata" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:7400 ! Apocrita property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:744530 name: Dissoconiaceae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:20169022 is_a: NCBITaxon:2726947 ! Mycosphaerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:745062 name: Lactucinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:219121 ! Cichorieae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:745316 name: Phomopsis mangiferae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34399 ! Phomopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:748119 name: Diaporthe destruens namespace: ncbi_taxonomy synonym: "Phomopsis destruens" RELATED synonym [] synonym: "Plenodomus destruens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:748176 name: Pestalotiopsis mangiferae namespace: ncbi_taxonomy synonym: "Pestalotia mangiferae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37840 ! Pestalotiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749461 name: Boeremia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:749464 name: Boeremia diversispora namespace: ncbi_taxonomy alt_id: NCBITaxon:302842 synonym: "Phoma diversispora" RELATED synonym [] synonym: "Phoma exigua var. diversispora" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749461 ! Boeremia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749465 name: Boeremia exigua namespace: ncbi_taxonomy alt_id: NCBITaxon:73000 synonym: "Phoma exigua" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749461 ! Boeremia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749486 name: Boeremia exigua var. coffeae namespace: ncbi_taxonomy synonym: "Ascochyta coffeae" RELATED synonym [] synonym: "Ascochyta tarda" RELATED synonym [] synonym: "Phoma tarda" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749465 ! Boeremia exigua property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:749552 name: Boeremia foveata namespace: ncbi_taxonomy alt_id: NCBITaxon:73006 alt_id: NCBITaxon:79597 synonym: "Phoma exigua var. foveata" RELATED synonym [] synonym: "Phoma foveata" RELATED synonym [] synonym: "Phoma solanicola f. foveata" RELATED synonym [] synonym: "potato gangrene" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:749461 ! Boeremia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749586 name: Ascochyta pisi namespace: ncbi_taxonomy alt_id: NCBITaxon:47971 alt_id: NCBITaxon:487625 synonym: "Ascochyta pisi var. pisi" RELATED synonym [] synonym: "Didymella pisi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5453 ! Ascochyta property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749589 name: Didymella pinodes namespace: ncbi_taxonomy alt_id: NCBITaxon:213093 alt_id: NCBITaxon:213094 alt_id: NCBITaxon:214535 alt_id: NCBITaxon:372028 alt_id: NCBITaxon:41255 synonym: "anamorph of Mycosphaerella pinodes" RELATED synonym [] synonym: "Ascochyta pinodes" RELATED synonym [] synonym: "Mycosphaerella pinodes" RELATED synonym [] synonym: "pea foot rot fungus" EXACT genbank_common_name [] synonym: "Peyronellaea pinodes" RELATED synonym [] synonym: "Sphaeria pinodes" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749593 name: Epicoccum sorghinum namespace: ncbi_taxonomy alt_id: NCBITaxon:73005 alt_id: NCBITaxon:913589 synonym: "Epicoccum sorghi" RELATED synonym [] synonym: "Phoma sorghina" RELATED synonym [] synonym: "Phoma sorghina var. sacchari Z.Y. Lin, Jing J. Wei, Mu Q. Zhang, Shi Q. Xu, Q. Guo, Xin Wang, Ji H. Wang, B.S. Chen, Y.X. Que, Z.H. Deng, R.K. Chen & C.A. Powell, 2015" RELATED synonym [] synonym: "Phyllosticta sorghina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:104397 ! Epicoccum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749596 name: Didymella americana namespace: ncbi_taxonomy alt_id: NCBITaxon:1766647 alt_id: NCBITaxon:72999 synonym: "Peyronellaea americana" RELATED synonym [] synonym: "Phoma americana" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749598 name: Didymella arachidicola namespace: ncbi_taxonomy alt_id: NCBITaxon:1086542 synonym: "Didymosphaeria arachidicola" RELATED synonym [] synonym: "Mycosphaerella arachidicola" RELATED synonym [] synonym: "Peyronellaea arachidicola" RELATED synonym [] synonym: "Phoma arachidicola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7496 name: Pterygota namespace: ncbi_taxonomy synonym: "Pterygota" EXACT scientific_name [] synonym: "winged insects" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:85512 ! Dicondylia property_value: has_rank NCBITaxon:subclass [Term] id: NCBITaxon:749621 name: Didymella glomerata namespace: ncbi_taxonomy alt_id: NCBITaxon:1325476 alt_id: NCBITaxon:93145 synonym: "Peyronellaea glomerata" RELATED synonym [] synonym: "Phoma glomerata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749633 name: Didymella pinodella namespace: ncbi_taxonomy alt_id: NCBITaxon:205687 alt_id: NCBITaxon:507360 synonym: "Ascochyta pinodella" RELATED synonym [] synonym: "Peyronellaea pinodella" RELATED synonym [] synonym: "Phoma medicaginis var. pinodella" RELATED synonym [] synonym: "Phoma pinodella" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749640 name: Didymella subglomerata namespace: ncbi_taxonomy alt_id: NCBITaxon:646072 synonym: "Peyronellaea subglomerata" RELATED synonym [] synonym: "Phoma subglomerata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:55170 ! Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749643 name: Phoma aliena namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37463 ! Phoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749880 name: Stagonosporopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:683158 ! Didymellaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:749883 name: Stagonosporopsis andigena namespace: ncbi_taxonomy synonym: "Phoma andigena" RELATED synonym [] synonym: "Phoma andina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749880 ! Stagonosporopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749886 name: Stagonosporopsis trachelii namespace: ncbi_taxonomy synonym: "Ascochyta bohemica" RELATED synonym [] synonym: "Phoma trachelii" RELATED synonym [] synonym: "Stagonospora bohemica" RELATED synonym [] synonym: "Stagonosporopsis bohemica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749880 ! Stagonosporopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749887 name: Stagonosporopsis caricae namespace: ncbi_taxonomy synonym: "Phoma caricae-papayae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749880 ! Stagonosporopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749889 name: Stagonosporopsis cucurbitacearum namespace: ncbi_taxonomy alt_id: NCBITaxon:55171 alt_id: NCBITaxon:55179 synonym: "Ascochyta cucumis" RELATED synonym [] synonym: "Didymella bryoniae" RELATED synonym [] synonym: "Mycosphaerella citrullina" RELATED synonym [] synonym: "Phoma cucurbitacearum" RELATED synonym [] synonym: "Sphaeria cucurbitacearum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749880 ! Stagonosporopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:749894 name: Stagonosporopsis hortensis namespace: ncbi_taxonomy synonym: "Ascochyta hortensis" RELATED synonym [] synonym: "Hendersonia hortensis" RELATED synonym [] synonym: "Stagonospora hortensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:749880 ! Stagonosporopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:75021 name: Drepane namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:75380 ! Drepaneidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:75022 name: Drepane punctata namespace: ncbi_taxonomy synonym: "Chaetodon punctatus" RELATED synonym [] synonym: "Drepanichthys punctatus" RELATED synonym [] synonym: "Harpochirus punctatus" RELATED synonym [] synonym: "spotted sicklefish" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:75021 ! Drepane property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7524 name: Hemiptera namespace: ncbi_taxonomy synonym: "bugs" RELATED blast_name [] xref: GC_ID:1 xref: PMID:7666451 is_a: NCBITaxon:33342 ! Paraneoptera property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:75319 name: Alternaria linicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2499262 ! Alternaria sect. Porri property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:753482 name: Achlya namespace: ncbi_taxonomy synonym: "Achlya" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:219490 ! Thyatirinae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:75374 name: Leptodontidium namespace: ncbi_taxonomy alt_id: NCBITaxon:286665 synonym: "Leptodontium" EXACT equivalent_name [] synonym: "Leptodontium (nom. illeg.)" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2907087 ! Leptodontidiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:75380 name: Drepaneidae namespace: ncbi_taxonomy synonym: "Drepanidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1489930 ! Ephippiformes property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:7540 name: Chilopoda namespace: ncbi_taxonomy synonym: "centipede" EXACT common_name [] synonym: "centipedes" EXACT genbank_common_name [] synonym: "centipedes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:10087567 is_a: NCBITaxon:61985 ! Myriapoda property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:754269 name: Coniothyrium sp. aurim1156 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2641852 ! unclassified Coniothyrium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7553 name: Diplopoda namespace: ncbi_taxonomy synonym: "millipede" EXACT common_name [] synonym: "millipedes" EXACT genbank_common_name [] synonym: "millipedes" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:61985 ! Myriapoda property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:75572 name: Pepper mild tigre virus namespace: ncbi_taxonomy synonym: "Pepper mild tigre geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:291027 ! unclassified Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:757414 name: Pseudomonas cannabina pv. alisalensis namespace: ncbi_taxonomy alt_id: NCBITaxon:663709 synonym: "Pseudomonas syingae pv. averrhoi" RELATED synonym [] synonym: "Pseudomonas syringae pv. alisalensis" RELATED synonym [] xref: GC_ID:11 xref: PMID:20227217 is_a: NCBITaxon:86840 ! Pseudomonas cannabina [Term] id: NCBITaxon:75746 name: Wheat yellow mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:39731 ! Bymovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:76125 name: Coriolopsis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:76126 name: Coriolopsis gallica namespace: ncbi_taxonomy alt_id: NCBITaxon:1383266 synonym: "Boletus favus" RELATED synonym [] synonym: "Cerrena gallica" RELATED synonym [] synonym: "Funalia gallica" RELATED synonym [] synonym: "Hexagonia gallica" RELATED synonym [] synonym: "Polyporus gallicus" RELATED synonym [] synonym: "Poria vulgaris" RELATED synonym [] synonym: "Trametella gallica" RELATED synonym [] synonym: "Trametes favus" RELATED synonym [] synonym: "Trametes gallica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:76125 ! Coriolopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:761846 name: Pucciniastrum minimum namespace: ncbi_taxonomy alt_id: NCBITaxon:2499809 synonym: "Thekopsora minima" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:60204 ! Pucciniastrum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:76204 name: Graphium namespace: ncbi_taxonomy alt_id: NCBITaxon:393873 synonym: "Arisbe" RELATED synonym [] synonym: "Graphium" EXACT scientific_name [] synonym: "Paranticopsis" RELATED synonym [] synonym: "Pathysa" RELATED synonym [] synonym: "Pazala" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:189314 ! Leptocircini property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:76351 name: Ceratobasidium cereale namespace: ncbi_taxonomy synonym: "Rhizoctonia cerealis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5251 ! Ceratobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:763997 name: Wilsonomyces carpophilus namespace: ncbi_taxonomy synonym: "Clasterosporium carpophilum" RELATED synonym [] synonym: "Coryneum carpophilum" RELATED synonym [] synonym: "Helminthosporium carpophilum" RELATED synonym [] synonym: "Sciniatosporium carpophilum" RELATED synonym [] synonym: "Sporocadus carpophilus" RELATED synonym [] synonym: "Stigmina carpophila" RELATED synonym [] synonym: "Thyrostroma carpophilum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2016219 ! Wilsonomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:76657 name: Dermateaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:108574 alt_id: NCBITaxon:221412 xref: GC_ID:1 is_a: NCBITaxon:5178 ! Helotiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:76658 name: Pyrenopeziza namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2316155 ! Ploettnerulaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:76659 name: Pyrenopeziza brassicae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:76658 ! Pyrenopeziza property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:766764 name: Debaryomycetaceae namespace: ncbi_taxonomy xref: GC_ID:12 is_a: NCBITaxon:2916678 ! CUG-Ser1 clade property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:767018 name: Diaporthaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5114 ! Diaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:76783 name: Puccinia carthami namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5296 ! Puccinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:77043 name: Rosellinia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37990 ! Xylariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:77044 name: Rosellinia necatrix namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:77043 ! Rosellinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:77046 name: Xylaria polymorpha namespace: ncbi_taxonomy synonym: "dead man's fingers" EXACT common_name [] synonym: "Sphaeria polymorpha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:37991 ! Xylaria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:77105 name: Sclerotinia borealis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5179 ! Sclerotinia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7711 name: Chordata namespace: ncbi_taxonomy synonym: "chordates" EXACT genbank_common_name [] synonym: "chordates" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:33511 ! Deuterostomia property_value: has_rank NCBITaxon:phylum [Term] id: NCBITaxon:7742 name: Vertebrata namespace: ncbi_taxonomy synonym: "Vertebrata" EXACT scientific_name [] synonym: "vertebrates" EXACT genbank_common_name [] synonym: "vertebrates" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:89593 ! Craniata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:7776 name: Gnathostomata namespace: ncbi_taxonomy synonym: "Gnathostomata" EXACT scientific_name [] synonym: "jawed vertebrates" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:7742 ! Vertebrata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:77811 name: Euphorbia mosaic virus namespace: ncbi_taxonomy synonym: "Euphorbia mosaic geminivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:78388 name: Coniothyrium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1460697 ! Coniothyriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:78399 name: Cylindrocladium clavatum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:40266 ! Cylindrocladium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:78410 name: Neonectria ditissima namespace: ncbi_taxonomy synonym: "Cylindrocarpon willkommii" RELATED synonym [] synonym: "Nectria ditissima" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:140106 ! Neonectria property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:78536 name: Euphyllophyta namespace: ncbi_taxonomy synonym: "euphyllophytes" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:58023 ! Tracheophyta property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:78542 name: Orobanche cernua var. cumana namespace: ncbi_taxonomy alt_id: NCBITaxon:2730525 synonym: "Orobanche cernua subsp. cumana" RELATED synonym [] synonym: "Orobanche cumana" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:53590 ! Orobanche cernua property_value: has_rank NCBITaxon:varietas [Term] id: NCBITaxon:78867 name: Microsphaera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34371 ! Erysiphaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:7898 name: Actinopterygii namespace: ncbi_taxonomy synonym: "Actinopterygi" RELATED synonym [] synonym: "bony fishes" RELATED blast_name [] synonym: "fish" EXACT common_name [] synonym: "fishes" EXACT common_name [] synonym: "Osteichthyes" RELATED in_part [] synonym: "ray-finned fishes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:117571 ! Euteleostomi property_value: has_rank NCBITaxon:superclass [Term] id: NCBITaxon:79249 name: Podosphaera leucotricha namespace: ncbi_taxonomy synonym: "Sphaerotheca leucotricha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62701 ! Podosphaera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:795077 name: Senecioninae namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:21622451 is_a: NCBITaxon:102812 ! Senecioneae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:795339 name: Phytopythium namespace: ncbi_taxonomy alt_id: NCBITaxon:1448054 synonym: "Ovatisporangium" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4782 ! Pythiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:795796 name: Rhizobium sp. pp2.52 namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:2613769 ! unclassified Rhizobium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:798159 name: Setophoma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5020 ! Phaeosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:798162 name: Setophoma terrestris namespace: ncbi_taxonomy synonym: "Phoma terrestris" RELATED synonym [] synonym: "Pyrenochaeta terrestris" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:798159 ! Setophoma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:7991 name: Characiformes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:186628 ! Characiphysae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:7992 name: Characidae namespace: ncbi_taxonomy synonym: "characins" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1489739 ! Characoidei property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:7995 name: Siluriformes namespace: ncbi_taxonomy synonym: "catfishes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:186628 ! Characiphysae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:80373 name: Magnaporthiopsis maydis namespace: ncbi_taxonomy synonym: "Cephalosporium maydis" RELATED synonym [] synonym: "Harpophora maydis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1491576 ! Magnaporthiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:80628 name: Atheliaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:389722 xref: GC_ID:1 is_a: NCBITaxon:452334 ! Atheliales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:80840 name: Burkholderiales namespace: ncbi_taxonomy synonym: "Burkholderia/Oxalobacter/Ralstonia group" RELATED synonym [] xref: GC_ID:11 xref: PMID:16403855 is_a: NCBITaxon:28216 ! Betaproteobacteria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:80864 name: Comamonadaceae namespace: ncbi_taxonomy synonym: "beta-1 subgroup" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:80840 ! Burkholderiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:80867 name: Acidovorax avenae name: Paracidovorax avenae namespace: ncbi_taxonomy alt_id: NCBITaxon:80870 synonym: "Acidivorax avenae" EXACT equivalent_name [] synonym: "Acidivorax avenae subsp. avenae" EXACT equivalent_name [] synonym: "Acidovorax avenae" RELATED synonym [] synonym: "Acidovorax avenae (Manns 1909) Willems et al. 1992" RELATED synonym [] synonym: "Acidovorax avenae subsp. avenae" RELATED synonym [] synonym: "Phytomonas rubrilineans" RELATED synonym [] synonym: "Pseudomonas avenae" RELATED synonym [] synonym: "Pseudomonas avenae Manns 1909 (Approved Lists 1980)" RELATED synonym [] synonym: "Pseudomonas rubrilineans" RELATED synonym [] synonym: "Pseudomonas rubrilineans (Lee et al. 1925) Stapp 1928 (Approved Lists 1980)" RELATED synonym [] synonym: "Xanthomonas rubrilineans" RELATED synonym [] xref: GC_ID:11 xref: PMID:1371056 xref: PMID:18993005 xref: PMID:19578147 is_a: NCBITaxon:12916 ! Acidovorax is_a: NCBITaxon:3051137 ! Paracidovorax property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:80884 name: Colletotrichum higginsianum namespace: ncbi_taxonomy alt_id: NCBITaxon:1585816 alt_id: NCBITaxon:1585817 alt_id: NCBITaxon:1585818 alt_id: NCBITaxon:1585819 alt_id: NCBITaxon:1585820 alt_id: NCBITaxon:1585821 xref: GC_ID:1 xref: PMID:25492986 is_a: NCBITaxon:2707350 ! Colletotrichum destructivum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:81049 name: Perenniporia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5317 ! Polyporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:81053 name: Rigidoporus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:378266 ! Meripilaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:81054 name: Rigidoporus vinctus namespace: ncbi_taxonomy alt_id: NCBITaxon:2760763 synonym: "Physisporinus vinctus" RELATED synonym [] synonym: "Polyporus vinctus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:81053 ! Rigidoporus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:81059 name: Steccherinaceae namespace: ncbi_taxonomy synonym: "Mycorraphiacaeae" RELATED synonym [] synonym: "Steccherinaceae Parmasto 1968" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:81060 name: Steccherinum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:81059 ! Steccherinaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:81064 name: Meruliaceae namespace: ncbi_taxonomy synonym: "Climacodontaceae" RELATED synonym [] synonym: "Phlebiaceae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5303 ! Polyporales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:81065 name: Gloeoporus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1931355 ! Irpicaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:81093 name: Magnaporthaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:126331 xref: GC_ID:1 is_a: NCBITaxon:639021 ! Magnaporthales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:81097 name: Cephalosporium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162454 ! Hypocreales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:8113 name: Cichlidae namespace: ncbi_taxonomy synonym: "cichlids" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:1489911 ! Cichliformes property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:8157 name: Carangidae namespace: ncbi_taxonomy synonym: "jacks" EXACT genbank_common_name [] synonym: "pompanos" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:1489907 ! Carangiformes property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:81931 name: Sweet potato chlorotic stunt virus namespace: ncbi_taxonomy alt_id: NCBITaxon:125861 synonym: "sweetpotato crinivirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:67753 ! Crinivirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82115 name: Rhizobiaceae namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:356 ! Hyphomicrobiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:82361 name: Cineraria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:795077 ! Senecioninae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:82847 name: Carnation vein mottle virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12195 ! Potyvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:8287 name: Sarcopterygii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:117571 ! Euteleostomi property_value: has_rank NCBITaxon:superclass [Term] id: NCBITaxon:82926 name: Globisporangium splendens namespace: ncbi_taxonomy synonym: "Pythium splendens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82932 name: Pythium arrhenomanes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82934 name: Pythium coloratum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82935 name: Pythium deliense namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82936 name: Pythium dissotocum namespace: ncbi_taxonomy alt_id: NCBITaxon:482727 xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82937 name: Pythium graminicola namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82941 name: Pythium myriotylum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82950 name: Globisporangium sylvaticum namespace: ncbi_taxonomy synonym: "Pythium sylvaticum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:82952 name: Globisporangium violae namespace: ncbi_taxonomy synonym: "Pythium violae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:1448052 ! Globisporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:83136 name: Trombidiformes namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:6946 ! Acariformes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:83139 name: Eupodina namespace: ncbi_taxonomy synonym: "Eupodides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:6947 ! Prostigmata property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:83145 name: Eleutherengona namespace: ncbi_taxonomy synonym: "Eleutherengonides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:6947 ! Prostigmata property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:83146 name: Tetranychoidea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:188550 ! Raphignathae property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:83174 name: Valsa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5117 ! Valsaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:83176 name: Fusicoccum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45131 ! Botryosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:83181 name: Phomopsis asparagi namespace: ncbi_taxonomy synonym: "Phoma asparagi" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:34399 ! Phomopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:83183 name: Diaporthe perniciosa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:36922 ! Diaporthe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:83184 name: Diaporthe eres namespace: ncbi_taxonomy alt_id: NCBITaxon:1006445 alt_id: NCBITaxon:1006446 alt_id: NCBITaxon:1498266 alt_id: NCBITaxon:1498272 alt_id: NCBITaxon:1498273 alt_id: NCBITaxon:1498274 alt_id: NCBITaxon:83179 synonym: "Phoma oblonga" RELATED synonym [] synonym: "Phomopsis oblonga" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2972384 ! Diaporthe eres species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:83226 name: Camaenidae namespace: ncbi_taxonomy alt_id: NCBITaxon:89998 synonym: "Bradybaenidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:87864 ! Camaenoidea property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:83235 name: Postia namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:34380577 is_a: NCBITaxon:2983313 ! Postiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:83249 name: Tyromyces namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2028218 ! Incrustoporiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:83250 name: Tyromyces chioneus namespace: ncbi_taxonomy synonym: "Polyporus chioneus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:83249 ! Tyromyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:83255 name: Antrodia albida namespace: ncbi_taxonomy synonym: "Daedalea albida" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40415 ! Antrodia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:83544 name: Chinese wheat mosaic virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:12291 ! Furovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:84563 name: ant, tsetse, mealybug, aphid, etc. endosymbionts namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:191675 ! Enterobacteriaceae incertae sedis property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:8457 name: Sauropsida namespace: ncbi_taxonomy synonym: "sauropsids" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:32524 ! Amniota property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:84741 name: Itersonilia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1851551 ! Mrakiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:84742 name: Itersonilia perplexans namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:84741 ! Itersonilia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:8492 name: Archosauria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1329799 ! Archelosauria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:85006 name: Micrococcales namespace: ncbi_taxonomy synonym: "Micrococcineae" RELATED synonym [] xref: GC_ID:11 xref: PMID:11837321 xref: PMID:19244447 xref: PMID:19542112 xref: PMID:20190019 xref: PMID:30186281 is_a: NCBITaxon:1760 ! Actinomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:85007 name: Mycobacteriales namespace: ncbi_taxonomy alt_id: NCBITaxon:1761 synonym: "Corynebacteriales" RELATED synonym [] synonym: "Corynebacteriales Goodfellow and Jones 2015" RELATED synonym [] synonym: "Corynebacterineae" RELATED synonym [] synonym: "Mycobacteriales Janke 1924 (Approved Lists 1980)" RELATED synonym [] xref: GC_ID:11 xref: PMID:11837321 xref: PMID:1736962 xref: PMID:19244447 xref: PMID:31157615 is_a: NCBITaxon:1760 ! Actinomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:85011 name: Kitasatosporales namespace: ncbi_taxonomy alt_id: NCBITaxon:1882 synonym: "Streptomycetales" RELATED synonym [] synonym: "Streptomycetes" RELATED synonym [] synonym: "Streptomycineae" RELATED synonym [] synonym: "Streptomycineae Rainey et al. 1997" RELATED synonym [] xref: GC_ID:11 xref: PMID:19244447 is_a: NCBITaxon:1760 ! Actinomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:85023 name: Microbacteriaceae namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:17551787 xref: PMID:19244447 xref: PMID:8085792 is_a: NCBITaxon:85006 ! Micrococcales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:85025 name: Nocardiaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:182102 synonym: "Williamsiaceae" RELATED synonym [] xref: GC_ID:11 xref: PMID:19244447 xref: PMID:30186281 is_a: NCBITaxon:85007 ! Mycobacteriales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:8504 name: Lepidosauria namespace: ncbi_taxonomy synonym: "lepidosaurs" EXACT genbank_common_name [] synonym: "lizards & snakes" RELATED blast_name [] synonym: "reptiles" RELATED in_part [] synonym: "Reptilia" RELATED in_part [] xref: GC_ID:1 xref: PMID:22982760 is_a: NCBITaxon:32561 ! Sauria property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:8509 name: Squamata namespace: ncbi_taxonomy synonym: "squamates" EXACT genbank_common_name [] xref: GC_ID:1 xref: PMID:16286089 xref: PMID:22982760 xref: PMID:23627680 is_a: NCBITaxon:8504 ! Lepidosauria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:85262 name: Streptocarpus ionanthus namespace: ncbi_taxonomy alt_id: NCBITaxon:141814 synonym: "African violet" EXACT common_name [] synonym: "Saintpaulia ionantha" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:48792 ! Streptocarpus sect. Saintpaulia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:85512 name: Dicondylia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:50557 ! Insecta property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:85558 name: Streptomyces turgidiscabies namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:17158976 xref: PMID:21112986 xref: PMID:9731290 is_a: NCBITaxon:1883 ! Streptomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:8560 name: Gekkota namespace: ncbi_taxonomy synonym: "geckos" EXACT genbank_common_name [] synonym: "Lacertilia" RELATED in_part [] xref: GC_ID:1 xref: PMID:22982760 is_a: NCBITaxon:1329961 ! Bifurcata property_value: has_rank NCBITaxon:infraorder [Term] id: NCBITaxon:85604 name: Amphiesmenoptera namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33392 ! Endopterygota property_value: has_rank NCBITaxon:superorder [Term] id: NCBITaxon:8561 name: Gekkonidae namespace: ncbi_taxonomy alt_id: NCBITaxon:35031 synonym: "geckos" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:8560 ! Gekkota property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:85621 name: 16SrII (Peanut WB group) namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:33926 ! Candidatus Phytoplasma property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:85631 name: 16SrXI (Rice yellow dwarf group) namespace: ncbi_taxonomy xref: GC_ID:11 is_a: NCBITaxon:33926 ! Candidatus Phytoplasma property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:85635 name: unclassified phytoplasmas namespace: ncbi_taxonomy alt_id: NCBITaxon:2763255 xref: GC_ID:11 is_a: NCBITaxon:33926 ! Candidatus Phytoplasma [Term] id: NCBITaxon:8565 name: Gekko namespace: ncbi_taxonomy synonym: "Gecko" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:385256 ! Gekkoninae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:858774 name: Pseudocercospora circumscissa namespace: ncbi_taxonomy alt_id: NCBITaxon:1702290 synonym: "Cercospora circumscissa" RELATED synonym [] synonym: "Passalora circumscissa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131324 ! Pseudocercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:858803 name: Pseudocercospora mali namespace: ncbi_taxonomy synonym: "Cercospora mali" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131324 ! Pseudocercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:858821 name: Pseudocercospora subsessilis namespace: ncbi_taxonomy synonym: "Cercospora subsessilis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131324 ! Pseudocercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:858833 name: Pseudocercospora timorensis namespace: ncbi_taxonomy synonym: "Cercospora timorensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:131324 ! Pseudocercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:85927 name: Diplodia mutila namespace: ncbi_taxonomy alt_id: NCBITaxon:502120 synonym: "Botryosphaeria stevensii" RELATED synonym [] synonym: "Diplodia mutila (Fr. : Fr.) Fr., 1849" RELATED synonym [] synonym: "Physalospora mutila" RELATED synonym [] synonym: "Sphaeria mutila" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:66735 ! Diplodia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:85947 name: Didymosphaeria namespace: ncbi_taxonomy synonym: "Didymosphaerella" RELATED synonym [] synonym: "Verruculina" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:221678 ! Didymosphaeriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:859477 name: Pseudocercospora handelii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:131324 ! Pseudocercospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:85996 name: unclassified Hypocreales namespace: ncbi_taxonomy alt_id: NCBITaxon:115136 alt_id: NCBITaxon:2689061 synonym: "unclassified Verticillium (in: Hypocreales)" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5125 ! Hypocreales [Term] id: NCBITaxon:86028 name: Oculimacula yallundae namespace: ncbi_taxonomy alt_id: NCBITaxon:170078 synonym: "Cercosporella herpotrichoides" RELATED synonym [] synonym: "Helgardia herpotrichoides" RELATED synonym [] synonym: "Mollisia yallundae" RELATED synonym [] synonym: "Pseudocercosporella herpotrichoides" RELATED synonym [] synonym: "Ramulispora herpotrichoides" RELATED synonym [] synonym: "Tapesia yallundae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:228665 ! Oculimacula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:862241 name: Physalacriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2982316 ! Marasmiineae property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:86257 name: Venturia carpophila namespace: ncbi_taxonomy alt_id: NCBITaxon:470464 synonym: "Fusicladium carpophilum" RELATED synonym [] synonym: "Fusicladosporium carpophilum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5024 ! Venturia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:86335 name: Peronospora destructor namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:70742 ! Peronospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:86658 name: Calceolaria namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:155890 ! Calceolariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:866800 name: Cactineae namespace: ncbi_taxonomy synonym: "Portulacineae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:3524 ! Caryophyllales property_value: has_rank NCBITaxon:suborder [Term] id: NCBITaxon:86802 name: Ustilago nuda namespace: ncbi_taxonomy synonym: "Ustilago segetum var. nuda" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5269 ! Ustilago property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:86840 name: Pseudomonas cannabina namespace: ncbi_taxonomy alt_id: NCBITaxon:200455 synonym: "Pseudomonas syringae group genomosp. 9" RELATED synonym [] synonym: "Pseudomonas syringae pv. cannabina" RELATED synonym [] xref: GC_ID:11 xref: PMID:10319466 xref: PMID:20227217 is_a: NCBITaxon:136849 ! Pseudomonas syringae group property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:87229 name: Botrytis porri namespace: ncbi_taxonomy synonym: "Botryotinia porri" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:33196 ! Botrytis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:873055 name: Seimatosporium mariae namespace: ncbi_taxonomy synonym: "Pestalotia mariae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:162418 ! Seimatosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:87530 name: Cyclamen persicum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:59973 ! Cyclamen property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:87748 name: Monographella namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:87837 ! Hyponectriaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:877976 name: North American clade namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102809 ! Astereae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:8782 name: Aves namespace: ncbi_taxonomy synonym: "avian" RELATED synonym [] synonym: "birds" EXACT genbank_common_name [] synonym: "birds" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:436492 ! Coelurosauria property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:87837 name: Hyponectriaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37989 ! Xylariales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:87864 name: Camaenoidea namespace: ncbi_taxonomy synonym: "Camaenacea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:216366 ! Helicina property_value: has_rank NCBITaxon:superfamily [Term] id: NCBITaxon:87869 name: Satsuma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:83226 ! Camaenidae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:87882 name: Burkholderia cepacia complex namespace: ncbi_taxonomy xref: GC_ID:11 xref: PMID:7526797 xref: PMID:9336927 is_a: NCBITaxon:32008 ! Burkholderia property_value: has_rank NCBITaxon:species_group [Term] id: NCBITaxon:881653 name: Elsinoe perseae namespace: ncbi_taxonomy synonym: "Sphaceloma perseae" RELATED synonym [] xref: GC_ID:1 xref: PMID:28373739 is_a: NCBITaxon:40996 ! Elsinoe property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:881954 name: Pyrenophora tritici-repentis DW7 race5 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:45151 ! Pyrenophora tritici-repentis property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:886583 name: Australasian lineages namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102809 ! Astereae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:886714 name: Artemisiinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102810 ! Anthemideae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:886948 name: Peronosclerospora philippinensis namespace: ncbi_taxonomy synonym: "Peronosclerospora phillippinensis" RELATED synonym [] synonym: "Sclerospora philippinensis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:230838 ! Peronosclerospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:886949 name: Peronosclerospora maydis namespace: ncbi_taxonomy synonym: "Peronospora maydis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:230838 ! Peronosclerospora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:88710 name: Pesotum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5152 ! Ophiostomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:88770 name: Panarthropoda namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:1206794 ! Ecdysozoa property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:888278 name: Aureobasidium caulivorum namespace: ncbi_taxonomy alt_id: NCBITaxon:93478 synonym: "Exobasidiopsis caulivora" RELATED synonym [] synonym: "Gloeosporium caulivorum" RELATED synonym [] synonym: "Kabatiella caulivora" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5579 ! Aureobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:89137 name: Paecilomyces fulvus namespace: ncbi_taxonomy synonym: "Byssochlamys fulva" RELATED synonym [] xref: GC_ID:1 xref: PMID:20198134 is_a: NCBITaxon:33202 ! Paecilomyces property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:89151 name: Musa x paradisiaca namespace: ncbi_taxonomy alt_id: NCBITaxon:105185 alt_id: NCBITaxon:161647 alt_id: NCBITaxon:174647 alt_id: NCBITaxon:213593 alt_id: NCBITaxon:213594 alt_id: NCBITaxon:214691 alt_id: NCBITaxon:214692 alt_id: NCBITaxon:99297 synonym: "banana" EXACT common_name [] synonym: "Musa acuminata x Musa balbisiana" RELATED synonym [] synonym: "Musa paradisiaca" RELATED synonym [] synonym: "Musa sapientum" RELATED synonym [] synonym: "Musa x sapientum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:4640 ! Musa property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:89175 name: Claviceps gigantea namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5110 ! Claviceps property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:89180 name: Claviceps zizaniae namespace: ncbi_taxonomy synonym: "Spermoedia zizaniae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5110 ! Claviceps property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:89336 name: Phytophthora sp. namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211524 ! unclassified Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:89489 name: Monascus ruber namespace: ncbi_taxonomy alt_id: NCBITaxon:159235 synonym: "Backusia terricola" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5097 ! Monascus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:89593 name: Craniata namespace: ncbi_taxonomy synonym: "Craniata" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:7711 ! Chordata property_value: has_rank NCBITaxon:subphylum [Term] id: NCBITaxon:89798 name: Dendrophora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5304 ! Corticiaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:90311 name: Cerrena namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2028206 ! Cerrenaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:90312 name: Cerrena unicolor namespace: ncbi_taxonomy synonym: "Boletus unicolor" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:90311 ! Cerrena property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:904351 name: Bipolaris sp. wcy02 namespace: ncbi_taxonomy synonym: "Cochliobolus sp. wcy02" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:2619002 ! unclassified Bipolaris property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:90723 name: Aphelenchoides namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:33823 ! Aphelenchoididae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:90724 name: Aphelenchoides fragariae namespace: ncbi_taxonomy alt_id: NCBITaxon:364539 xref: GC_ID:1 is_a: NCBITaxon:90723 ! Aphelenchoides property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:907345 name: Gymnosporangium nelsonii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5265 ! Gymnosporangium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:907947 name: Phytopythium vexans namespace: ncbi_taxonomy alt_id: NCBITaxon:42099 synonym: "Ovatisporangium vexans" RELATED synonym [] synonym: "Phytopythium vexans (de Bary) Abad, De Cock, Bala, Robideau, Lodhi & Lvesque 2015" RELATED synonym [] synonym: "Pythium vexans" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:795339 ! Phytopythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:908225 name: Verbeneae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:21910 ! Verbenaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:908283 name: Blumeria hordei CC146 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2867405 ! Blumeria hordei property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:90883 name: Cystofilobasidiales namespace: ncbi_taxonomy alt_id: NCBITaxon:90885 synonym: "Heterobasidiomycetidae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:155616 ! Tremellomycetes property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:909071 name: Discosia artocreas namespace: ncbi_taxonomy synonym: "Sphaeria artocreas" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:162396 ! Discosia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:909455 name: Fusarium sp. FOSC 3-a namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2750216 ! unclassified Fusarium oxysporum species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:90976 name: Curvularia cymbopogonis namespace: ncbi_taxonomy alt_id: NCBITaxon:131377 synonym: "Cochliobolus cymbopogonis" RELATED synonym [] synonym: "Helminthosporium cymbopogonis" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:910407 name: Brassica juncea/Albugo candida mixed genomic library namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:119167 ! mixed EST libraries property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:91061 name: Bacilli namespace: ncbi_taxonomy synonym: "Bacillus/Lactobacillus/Streptococcus group" RELATED synonym [] synonym: "Firmibacteria" RELATED synonym [] xref: GC_ID:11 is_a: NCBITaxon:1239 ! Bacillota property_value: has_rank NCBITaxon:class [Term] id: NCBITaxon:910611 name: Phytophthora sp. raspberry/TIB-2010 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:211524 ! unclassified Phytophthora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:911341 name: Heliantheae alliance namespace: ncbi_taxonomy xref: GC_ID:1 xref: PMID:18375151 is_a: NCBITaxon:102804 ! Asteroideae property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:911346 name: Tetraneurinae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:102813 ! Helenieae property_value: has_rank NCBITaxon:subtribe [Term] id: NCBITaxon:91347 name: Enterobacterales namespace: ncbi_taxonomy synonym: "enterobacteria" RELATED blast_name [] synonym: "Enterobacteriaceae and related endosymbionts" RELATED synonym [] synonym: "Enterobacteriaceae group" RELATED synonym [] synonym: "Enterobacteriales" RELATED synonym [] synonym: "gamma-3 proteobacteria" RELATED in_part [] xref: GC_ID:11 xref: PMID:27620848 is_a: NCBITaxon:1236 ! Gammaproteobacteria property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:91370 name: Pyrenophora seminiperda namespace: ncbi_taxonomy alt_id: NCBITaxon:318717 synonym: "Angiopoma campanulatum" RELATED synonym [] synonym: "Pleosphaeria semeniperda" RELATED synonym [] synonym: "Pleosphaeria seminiperda" RELATED synonym [] synonym: "Pyrenophora semeniperda" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5027 ! Pyrenophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:91493 name: Exserohilum namespace: ncbi_taxonomy alt_id: NCBITaxon:39952 synonym: "Setosphaeria" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:91728 name: Mormyrops namespace: ncbi_taxonomy synonym: "Mormyrops" EXACT scientific_name [] xref: GC_ID:1 is_a: NCBITaxon:31092 ! Mormyridae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:91729 name: Mormyrops anguilloides namespace: ncbi_taxonomy synonym: "Cornish jack" EXACT genbank_common_name [] synonym: "Mormyrus anguilloides" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:2035134 ! Mormyrops property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:91827 name: Gunneridae namespace: ncbi_taxonomy alt_id: NCBITaxon:1437200 synonym: "core eudicots" EXACT equivalent_name [] synonym: "core eudicotyledons" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:71240 ! eudicotyledons property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:91829 name: Altingiaceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:41946 ! Saxifragales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:91834 name: rosids incertae sedis namespace: ncbi_taxonomy alt_id: NCBITaxon:72024 xref: GC_ID:1 is_a: NCBITaxon:71275 ! rosids [Term] id: NCBITaxon:91835 name: fabids namespace: ncbi_taxonomy alt_id: NCBITaxon:41939 alt_id: NCBITaxon:4293 synonym: "eurosids I" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:71275 ! rosids property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:91836 name: malvids namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:71275 ! rosids property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:91882 name: campanulids namespace: ncbi_taxonomy alt_id: NCBITaxon:41940 alt_id: NCBITaxon:4379 synonym: "euasterids II" RELATED synonym [] xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:71274 ! asterids property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:91888 name: lamiids namespace: ncbi_taxonomy alt_id: NCBITaxon:41935 synonym: "euasterids I" RELATED synonym [] xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:71274 ! asterids property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:91896 name: Orobanchaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:1538028 alt_id: NCBITaxon:216771 alt_id: NCBITaxon:374689 alt_id: NCBITaxon:41382 synonym: "Scrophulariaceae" RELATED in_part [] xref: GC_ID:1 xref: PMID:12144762 is_a: NCBITaxon:4143 ! Lamiales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:91934 name: Phialophora cinerescens namespace: ncbi_taxonomy synonym: "Verticillium cinerescens" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5600 ! Phialophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:92464 name: Cladosporium allii-cepae namespace: ncbi_taxonomy synonym: "Davidiella allii-cepae" RELATED synonym [] synonym: "Heterosporium allii-cepae" RELATED synonym [] synonym: "Mycosphaerella allii-cepae" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5498 ! Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:92473 name: Podosphaera fuliginea namespace: ncbi_taxonomy alt_id: NCBITaxon:1961903 synonym: "Alphitomorpha fuliginea" RELATED synonym [] synonym: "Sphaerotheca fuliginea" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:62701 ! Podosphaera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:92696 name: Steccherinum ochraceum namespace: ncbi_taxonomy synonym: "Hydnum ochraceum" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:81060 ! Steccherinum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:92860 name: Pleosporales namespace: ncbi_taxonomy alt_id: NCBITaxon:134361 alt_id: NCBITaxon:371109 xref: GC_ID:1 is_a: NCBITaxon:451868 ! Pleosporomycetidae property_value: has_rank NCBITaxon:order [Term] id: NCBITaxon:93133 name: Mycosphaerellaceae namespace: ncbi_taxonomy alt_id: NCBITaxon:93134 xref: GC_ID:1 xref: PMID:17486979 is_a: NCBITaxon:2726947 ! Mycosphaerellales property_value: has_rank NCBITaxon:family [Term] id: NCBITaxon:9347 name: Eutheria namespace: ncbi_taxonomy synonym: "eutherian mammals" EXACT common_name [] synonym: "placental mammals" EXACT common_name [] synonym: "Placentalia" RELATED synonym [] synonym: "placentals" EXACT genbank_common_name [] synonym: "placentals" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:32525 ! Theria property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:93488 name: Cladosporium macrocarpum namespace: ncbi_taxonomy synonym: "Davidiella macrocarpa" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5498 ! Cladosporium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:935935 name: Phaeocytostroma namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:767018 ! Diaporthaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:935936 name: Phaeocytostroma ambiguum namespace: ncbi_taxonomy synonym: "Sphaeropsis ambigua" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:935935 ! Phaeocytostroma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:935947 name: Phaeocytostroma sacchari namespace: ncbi_taxonomy synonym: "Melanconium sacchari" RELATED synonym [] synonym: "Pleocyta sacchari" RELATED synonym [] synonym: "Trullula sacchari" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:935935 ! Phaeocytostroma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:936004 name: Potato yellowing virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:339419 ! unclassified Ilarvirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:93612 name: Exserohilum turcicum namespace: ncbi_taxonomy alt_id: NCBITaxon:132101 synonym: "Bipolaris turcica" RELATED synonym [] synonym: "Drechslera turcica" RELATED synonym [] synonym: "Helminthosporium turcicum" RELATED synonym [] synonym: "Luttrellia turcica" RELATED synonym [] synonym: "northern corn leaf blight" EXACT common_name [] synonym: "Setosphaeria turcica" RELATED synonym [] synonym: "Trichometasphaeria turcica" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:91493 ! Exserohilum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:936450 name: Penicillium oxalicum JU-A10-S namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:69781 ! Penicillium oxalicum property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:93998 name: Typhula incarnata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:68809 ! Typhula property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:941525 name: Gloeophyllum mexicanum namespace: ncbi_taxonomy synonym: "Lenzites mexicanus" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:40443 ! Gloeophyllum property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:942734 name: Grapevine associated Partitivirus-2 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37960 ! unclassified Partitiviridae property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:944494 name: Cryptosporiopsis sp. zjqy279 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2644277 ! unclassified Cryptosporiopsis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:944628 name: Pythium aff. volutum namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:944638 name: Pythium tardicrescens namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4797 ! Pythium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:945695 name: Urophlyctis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:109873 ! Physodermataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:945697 name: Urophlyctis trifolii namespace: ncbi_taxonomy synonym: "Olpidium trifolii" RELATED synonym [] synonym: "Physoderma trifolii" RELATED synonym [] synonym: "Synchytrium trifolii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:945695 ! Urophlyctis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:946123 name: Diplocarpon mali namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:446948 ! Diplocarpon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:946125 name: Diplocarpon rosae namespace: ncbi_taxonomy alt_id: NCBITaxon:324778 synonym: "Asteroma rosae" RELATED synonym [] synonym: "Marssonina rosae" RELATED synonym [] synonym: "rose black spot fungus" EXACT common_name [] xref: GC_ID:1 is_a: NCBITaxon:446948 ! Diplocarpon property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:948311 name: Fusarium proliferatum namespace: ncbi_taxonomy alt_id: NCBITaxon:165209 alt_id: NCBITaxon:224913 alt_id: NCBITaxon:42674 synonym: "Cephalosporium proliferatum Matsush., 1971" RELATED synonym [] synonym: "Fusarium proliferatum var. proliferatum" RELATED synonym [] synonym: "Gibberella intermedia" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:171627 ! Fusarium fujikuroi species complex property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:95323 name: Hapsidospora namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:162454 ! Hypocreales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:95525 name: Tomato yellow mosaic virus namespace: ncbi_taxonomy synonym: "tomato yellow mosaic begomovirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:291027 ! unclassified Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:95622 name: Broad bean wilt virus namespace: ncbi_taxonomy synonym: "broad bean wilt fabavirus" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:352925 ! unclassified Fabavirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:95729 name: Stemphylium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:28556 ! Pleosporaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:95735 name: Curvularia intermedia namespace: ncbi_taxonomy alt_id: NCBITaxon:74405 synonym: "Cochliobolus intermedius" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:95739 name: Curvularia ravenelii namespace: ncbi_taxonomy synonym: "Bipolaris ravenelii" RELATED synonym [] synonym: "Cochliobolus ravenelii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:95742 name: Curvularia clavata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5502 ! Curvularia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:96312 name: Leptographium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5152 ! Ophiostomataceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:97005 name: Heterodera schachtii namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:34509 ! Heterodera property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:97093 name: Trichoderma koningii namespace: ncbi_taxonomy alt_id: NCBITaxon:114618 alt_id: NCBITaxon:2050754 synonym: "Hypocrea koningii" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:5543 ! Trichoderma property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:97095 name: Eutypa namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:42364 ! Diatrypaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:97096 name: Eutypa lata namespace: ncbi_taxonomy alt_id: NCBITaxon:140181 synonym: "Eutypa armeniacae" RELATED synonym [] synonym: "Sphaeria lata" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:97095 ! Eutypa property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:97099 name: Rhizopus circinans namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:4842 ! Rhizopus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:97376 name: Biscogniauxia namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:37990 ! Xylariaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:977775 name: Panpulmonata namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:216307 ! Euthyneura property_value: has_rank NCBITaxon:clade [Term] id: NCBITaxon:979248 name: Didymella sp. minfeng12 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2632349 ! unclassified Didymella property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:980815 name: Sclerophora pallida namespace: ncbi_taxonomy synonym: "Calicium pallidum" RELATED synonym [] synonym: "Coniocybe pallida" RELATED synonym [] synonym: "Embolus pallidus" RELATED synonym [] synonym: "Fulgia pallida" RELATED synonym [] synonym: "Pilacre pallida" RELATED synonym [] synonym: "Pseudoconiocybe pallida" RELATED synonym [] synonym: "Roesleria pallida" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:188195 ! Sclerophora property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:981070 name: Arabideae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3700 ! Brassicaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:981071 name: Brassiceae namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:3700 ! Brassicaceae property_value: has_rank NCBITaxon:tribe [Term] id: NCBITaxon:981365 name: Rhinocladium namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5593 ! Microascaceae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:985138 name: Zymoseptoria tritici STIR04 A48b namespace: ncbi_taxonomy synonym: "Mycosphaerella graminicola STIR04 A48b" EXACT equivalent_name [] synonym: "Mycosphaerella graminicola STIR04_A48b" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:1047171 ! Zymoseptoria tritici property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:985895 name: Plenodomus lingam JN3 namespace: ncbi_taxonomy synonym: "Leptosphaeria maculans v23.1.3" EXACT equivalent_name [] xref: GC_ID:1 is_a: NCBITaxon:5022 ! Plenodomus lingam property_value: has_rank NCBITaxon:strain [Term] id: NCBITaxon:98780 name: Resinicium namespace: ncbi_taxonomy synonym: "Resinicium Parmasto 1968" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:227323 ! Hymenochaetales incertae sedis property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:98781 name: Resinicium bicolor namespace: ncbi_taxonomy synonym: "Hydnum bicolor" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:98780 ! Resinicium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:988144 name: Parastichtis namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:572922 ! Xyleninae property_value: has_rank NCBITaxon:genus [Term] id: NCBITaxon:988145 name: Parastichtis suspecta namespace: ncbi_taxonomy synonym: "Noctua suspecta" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:988144 ! Parastichtis property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:990864 name: Arthrinium sp. zzz304 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2643771 ! unclassified Arthrinium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:99112 name: Phelipanche aegyptiaca namespace: ncbi_taxonomy alt_id: NCBITaxon:517215 synonym: "Orobanche aegyptiaca" RELATED synonym [] xref: GC_ID:1 is_a: NCBITaxon:320805 ! Phelipanche property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:992430 name: Rhizoctonia sp. cc43 namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:2645889 ! unclassified Rhizoctonia property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:998434 name: Septobasidium bogoriense namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:5246 ! Septobasidium property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:999288 name: Sweet potato leaf curl South Carolina virus namespace: ncbi_taxonomy xref: GC_ID:1 is_a: NCBITaxon:10814 ! Begomovirus property_value: has_rank NCBITaxon:species [Term] id: NCBITaxon:999541 name: Burkholderia gladioli BSR3 namespace: ncbi_taxonomy synonym: "Burkholderia gladioli str. BSR3" EXACT equivalent_name [] synonym: "Burkholderia gladioli strain BSR3" EXACT equivalent_name [] xref: GC_ID:11 xref: PMID:21478339 is_a: NCBITaxon:28095 ! Burkholderia gladioli property_value: has_rank NCBITaxon:strain [Term] id: OBI:0100026 name: organism def: "A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs." [] is_a: BFO:0000040 ! material entity property_value: IAO:0000111 "organism" xsd:string property_value: IAO:0000112 "animal" xsd:string property_value: IAO:0000112 "fungus" xsd:string property_value: IAO:0000112 "plant" xsd:string property_value: IAO:0000112 "virus" xsd:string property_value: IAO:0000114 IAO:0000122 property_value: IAO:0000116 "10/21/09: This is a placeholder term, that should ideally be imported from the NCBI taxonomy, but the high level hierarchy there does not suit our needs (includes plasmids and 'other organisms')" xsd:string property_value: IAO:0000116 "13-02-2009:\nOBI doesn't take position as to when an organism starts or ends being an organism - e.g. sperm, foetus.\nThis issue is outside the scope of OBI." xsd:string property_value: IAO:0000117 "GROUP: OBI Biomaterial Branch" xsd:string property_value: IAO:0000119 "WEB: http://en.wikipedia.org/wiki/Organism" xsd:string [Term] id: OGMS:0000031 name: disease def: "A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism." [] is_a: BFO:0000016 ! disposition [Term] id: PATO:0000001 name: quality def: "A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities" [PATOC:GVG] is_a: BFO:0000020 ! specifically dependent continuant [Term] id: PECO:0001001 name: plant exposure namespace: plant_experimental_conditions_ontology alt_id: EO:0001001 def: "A plant experimental condition (PECO:0007359) or set of conditions describing the application of an abiotic (PECO:0007191) or biotic plant exposure (PECO:0007357) or the combinatorial application thereof." [PECO:cooperl] synonym: "plant treatment (narrow)" NARROW [] xref: PECO_GIT:48 is_a: PECO:0007359 ! plant experimental condition created_by: cooperl creation_date: 2013-04-10T13:21:11Z [Term] id: PECO:0007359 name: plant experimental condition namespace: plant_experimental_conditions_ontology alt_id: EO:0007359 def: "A plant exposure (PECO:0001001) and/or study type (PECO:0007231) applied to a whole plant (PO:0000003), a plant structure (PO:00090119), and/or a plant population as part of an experiment to evaluate the plant response." [Gramene:pankaj_jaiswal, PECO:cooperl] comment: The Plant Experimental Condition Ontology describes the treatments, growing conditions, and/or study types used in various types of plant biology experiments. The subjects of the studies may also include in vitro plant structures (PO:0000004). The broadest classes are the plant study types (PECO:0007231), where the terms describe the type of growth facility used in an experiment. Each study type such as field study (PECO:0007256), growth chamber study (PECO:0007269), greenhouse study (PECO:0007248), or laboratory study (PECO:0007255) will also involve different growing conditions, and may also include specific biotic (PECO:0007357) and/or abiotic (PECO:0007191) plant treatments. A plant treatment (PECO:0001001) may be a component of a plant experimental condition (PECO:0007359), and the plant study type (PECO:0007231). synonym: "plant treatment ontology (related)" RELATED [] synonym: "treatment ontology (related)" RELATED [] xref: PECO_GIT:4 [Term] id: PO:0000003 name: whole plant namespace: plant_anatomy def: "A plant structure (PO:0005679) which is a whole organism." [POC:curators] comment: Examples include plant embryo (PO:0009009), megagametophyte (PO:0025279) and microgametophyte (PO:0025280). subset: reference subset: TraitNet synonym: "bush (narrow)" NARROW [] synonym: "clonal colony (related)" RELATED [] synonym: "colony (related)" RELATED [] synonym: "frutex (narrow)" NARROW [FNA:e4dde193-57f7-4ab9-9d25-96b4ca0088ba] synonym: "frutices (narrow)" NARROW Plural [FNA:ec8c2064-2a67-43d7-8e14-aecfef5cf33b] synonym: "gametophyte (narrow)" NARROW [] synonym: "genet (broad)" BROAD [] synonym: "herb (narrow)" NARROW [] synonym: "liana (narrow)" NARROW [] synonym: "planta entera (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "prothalli (narrow)" NARROW Plural [FNA:4b610104-1bb0-4c6b-9bb9-e3cc61d11ac0] synonym: "prothallium (narrow)" NARROW [] synonym: "prothallus (narrow)" NARROW [FNA:f8f31520-e4bc-4430-9274-8dd3cee7ffd8] synonym: "ramet (broad)" BROAD [] synonym: "seedling (narrow)" NARROW [] synonym: "shrub (narrow)" NARROW [] synonym: "sporophyte (narrow)" NARROW [] synonym: "suffrutex (narrow)" NARROW [FNA:99508f62-7116-4e2b-90c0-19ff55ebd967] synonym: "suffrutices (narrow)" NARROW Plural [FNA:ba1b1bd5-75bd-4195-b11c-3aba08da08c2] synonym: "tree (narrow)" NARROW [] synonym: "vine (narrow)" NARROW [] synonym: "woody clump (narrow)" NARROW [FNA:c1ccca7d-2a98-4a9d-8603-c34b551935e0] synonym: "植物体全体 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:4b610104-1bb0-4c6b-9bb9-e3cc61d11ac0 xref: FNA:99508f62-7116-4e2b-90c0-19ff55ebd967 xref: FNA:ba1b1bd5-75bd-4195-b11c-3aba08da08c2 xref: FNA:c1ccca7d-2a98-4a9d-8603-c34b551935e0 xref: FNA:e4dde193-57f7-4ab9-9d25-96b4ca0088ba xref: FNA:ec8c2064-2a67-43d7-8e14-aecfef5cf33b xref: FNA:f8f31520-e4bc-4430-9274-8dd3cee7ffd8 xref: PO_GIT:538 xref: PO_GIT:69 is_a: PO:0009011 ! plant structure [Term] id: PO:0000004 name: in vitro plant structure namespace: plant_anatomy def: "A plant structure (PO:0009011) that is grown or maintained in vitro." [POC:curators, POC:Laurel_Cooper] comment: In vitro growth is defined as microbe-free growth in a sterile, culture environment, usually in the laboratory. An example of a sterile culture environment is growth on or in a nutrient medium in a Petri dish, culture flask or test tube. Microbes may be intentionally added to the culture environment, such as in co-culture with Agrobacterium. synonym: "estructura vegetal in vito (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "培養下植物構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:64 is_a: PO:0009011 ! plant structure [Term] id: PO:0000017 name: vascular leaf primordium namespace: plant_anatomy def: "A phyllome primordium (PO:0025128) that develops from a vascular leaf anlagen (PO:0025431) and is part of a vegetative shoot apex (PO:0025223) and is committed to the development of a vascular leaf (PO:0009025)." [POC:curators, POC:Laurel_Cooper] synonym: "leaf primordium (exact)" EXACT [] synonym: "portion of vascular leaf primordium tissue (exact)" EXACT [] synonym: "primordio de hoja (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "vascular leaf primordia (exact, plural)" EXACT [] synonym: "葉原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:466 is_a: PO:0025128 ! phyllome primordium relationship: develops_from PO:0025431 ! vascular leaf anlagen relationship: part_of PO:0025223 ! vegetative shoot apex [Term] id: PO:0000018 name: ovule primordium namespace: plant_anatomy def: "A floral structure primordium (PO:0025477) that is committed to the development of an ovule (PO:0020003)." [ISBN:0471245208, POC:curators] comment: The transition from ovule primordium to ovule occurs when an integument (PO:0020021) begins to develop from the protoderm (PO:0006210). synonym: "portion of ovule primordium tissue (exact)" EXACT [] synonym: "primordio de óvulo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "胚珠原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 is_a: PO:0025477 ! floral organ primordium [Term] id: PO:0000019 name: gynoecium primordium namespace: plant_anatomy def: "A floral structure primordium (PO:0025477) that is committed to the development of a gynoecium (PO:0009062)." [POC:curators] comment: Use carpel primordium (PO:0004703) for the primordium (PO:0025127) of an individual carpel (PO:0009030). synonym: "pistil primordium (exact)" EXACT [] synonym: "portion of gynoecium primordium tissue (exact)" EXACT [] synonym: "primordio de gineceo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "雌蕊原基(可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 is_a: PO:0025477 ! floral organ primordium [Term] id: PO:0000021 name: petal primordium namespace: plant_anatomy def: "A phyllome primordium (PO:0025128) that develops from a petal anlagen (PO:0025484) and is committed to the development of a petal (PO:0009032)." [POC:curators] synonym: "petal primordia (exact, plural)" EXACT [] synonym: "portion of petal primordium tissue (exact)" EXACT [] synonym: "primordio de pétalo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花弁原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 xref: PO_GIT:466 is_a: PO:0025128 ! phyllome primordium is_a: PO:0025477 ! floral organ primordium relationship: develops_from PO:0025484 ! petal anlagen [Term] id: PO:0000037 name: shoot axis apex namespace: plant_anatomy def: "A shoot axis (PO:0025029) that is the most distal part of a shoot system (PO:0009006) and has as parts a shoot apical meristem (PO:0020148) and the youngest primordia (PO:0025127)." [POC:curators] subset: reference synonym: "ápice del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "シュート頂、茎頂 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:234 is_a: PO:0025029 ! shoot axis [Term] id: PO:0000051 name: petiole epidermis namespace: plant_anatomy def: "A portion of leaf epidermis (PO:0006016) that is part of a petiole (PO:0020038)." [POC:Ramona_Walls, TAIR_curator:Katica_Ilic] comment: If you are annotating to this term, please add an additional annotation to vascular leaf (PO:0009025) or non-vascular leaf (PO:0025075), depending on the species. All annotations for angiosperms, gymnosperms, and pteridophytes should go to vascular leaf and all annotations for bryophytes should go to non-vascular leaf. synonym: "epidermis del pecíolo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "葉柄表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0006016 ! leaf epidermis intersection_of: PO:0006016 ! leaf epidermis intersection_of: part_of PO:0020038 ! petiole relationship: part_of PO:0020038 ! petiole [Term] id: PO:0000055 name: bud namespace: plant_anatomy def: "An undeveloped shoot system (PO:0009006)." [POC:curators] subset: TraitNet synonym: "adventitious bud (narrow)" NARROW [FNA:0eed275a-5dae-414a-bf36-81a08e6c6ba9] synonym: "yema (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "芽 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:0eed275a-5dae-414a-bf36-81a08e6c6ba9 xref: PO_GIT:124 is_a: PO:0009006 ! shoot system relationship: participates_in PO:0025528 ! bud development stage [Term] id: PO:0000058 name: vegetative bud namespace: plant_anatomy def: "A bud (PO:0000055) that develops into a vegetative shoot system (PO:0025607)." [POC:curators, POC:Laurel_Cooper] synonym: "yema vegetativa (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "枝芽 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:124 xref: PO_GIT:463 is_a: PO:0000055 ! bud [Term] id: PO:0000112 name: shoot axis epidermis namespace: plant_anatomy def: "A portion of shoot system epidermis (PO:0006035) that is part of a shoot axis (PO:0025029)." [POC:curators, POC:Laurel_Cooper] comment: Can occur on a stem or branch. synonym: "branch epidermis (narrow)" NARROW [] synonym: "epidermis del eje del tallo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "シュート軸表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0006035 ! shoot system epidermis intersection_of: PO:0006035 ! shoot system epidermis intersection_of: part_of PO:0025029 ! shoot axis relationship: part_of PO:0025029 ! shoot axis [Term] id: PO:0000225 name: peripheral zone namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) which is the organogenic region of the meristem, characterized by higher rates of cell division." [ISBN:0521288959, TAIR_curator:Leonore_Reiser] synonym: "peripheral meristem (related)" RELATED [] synonym: "zona periférica (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "周辺帯 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009013 ! portion of meristem tissue relationship: part_of PO:0020148 ! shoot apical meristem [Term] id: PO:0000229 name: flower meristem namespace: plant_anatomy alt_id: PO:0006329 alt_id: PO:0006373 alt_id: PO:0006374 alt_id: PO:0025091 def: "A portion of reproductive shoot apical meristem tissue (PO:0008028) that gives rise to the floral organs (PO:0025395)." [Gramene:Pankaj_Jaiswal, POC:curators] comment: In Zea mays and other grasses, the floret meristem is part of a spikelet and develops into a specific type of floret. If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the spikelet type that the meristem is part of. Choose the most specific term possible from: spikelet (PO:0009051), ear spikelet (PO:0006320), ear pedicellate spikelet (PO:0006348), ear sessile spikelet (PO:0006349), tassel spikelet (PO:0006309), tassel pedicellate spikelet (PO:0006312), tassel sessile spikelet (PO:0006311). synonym: "ear floret meristem (narrow)" NARROW [] synonym: "floral apical meristem (related)" RELATED [] synonym: "floral meristem (exact)" EXACT [] synonym: "floret meristem (narrow)" NARROW [] synonym: "mersitema floral (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "Poaceae floret meristem (narrow)" NARROW [] synonym: "tassel floret meristem (narrow)" NARROW [] synonym: "花芽分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0008028 ! reproductive shoot apical meristem [Term] id: PO:0000282 name: trichome namespace: plant_anatomy alt_id: PO:0004510 def: "A unicellular or multicellular plant structure (PO:0009011) that forms a non-sclerified outgrowth from the epidermis (PO:0005679)." [PMID:19939948, POC:curators] comment: This class is the union of unicellular trichome (PO:0025537) and multicellular trichome (PO:0025162). A trichome can vary in length and shape and may be branched or unbranched. It may be glandular or non-secretory. subset: TraitNet synonym: "barb trichome (broad)" BROAD [FNA:aa191087-e979-486f-ad87-0e050a83090f] synonym: "bristle (broad)" BROAD [FNA:78121d02-e7db-45eb-b1b7-011d5026beae] synonym: "capilli (narrow)" NARROW Plural [FNA:602c5ee8-6634-4093-bd2c-016dde8a350e] synonym: "capillus (narrow)" NARROW [FNA:43d66471-4955-4bc2-a70c-c88e33877c42] synonym: "cilia (narrow)" NARROW Plural [FNA:c358e298-5926-42d6-8d49-a918cdc72406] synonym: "cilium (narrow)" NARROW [FNA:12abd29b-5eae-47a2-baae-4059581e7eaa] synonym: "glochid (narrow)" NARROW [FNA:881fcb45-5dfd-4d06-8d6f-a111ba5e220a] synonym: "glochidia (narrow)" NARROW Plural [FNA:899a83bf-39bb-4128-b472-b0e27dcf5b35] synonym: "glochidium (narrow)" NARROW [FNA:99a6f711-b4da-4231-8dce-9ed171b87e9c] synonym: "hair (narrow)" NARROW [FNA:9ef3a0eb-f8e4-4a7b-911e-92952fc19956] synonym: "lepides (narrow)" NARROW Plural [FNA:e6a34ceb-a3e7-49f7-a4ac-cf0ea1552dc4] synonym: "lepis (narrow)" NARROW [FNA:bb12cad4-db12-4e59-a9fc-1676f2558a0a] synonym: "non-secretory trichome (narrow)" NARROW [] synonym: "scale (narrow)" NARROW [FNA:8c618dea-f3dd-434f-bb13-23273ea6c143] synonym: "seta (related)" RELATED [FNA:c751440c-a7b3-4997-aed8-47f8254fd05f] synonym: "setae (related)" RELATED [FNA:93b95b97-0f1a-4d26-9c86-ebede4157269] synonym: "squama (narrow)" NARROW [FNA:6cb9e7af-32a7-413a-8f80-9e40d3ae462a] synonym: "squamae (narrow)" NARROW Plural [FNA:cbb9ceb5-a404-4b5c-9c8f-4cf0ca6bade2] synonym: "squamella (narrow)" NARROW [FNA:ead20a1b-057b-4008-9466-bdb8e283aa82] synonym: "squamellae (narrow)" NARROW Plural [FNA:c5765385-917c-465e-83f8-b4fe5d693146] synonym: "squamule (narrow)" NARROW [FNA:f18da584-2b0b-4b03-a614-40140a1cb89e] synonym: "tricoma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "毛茸、糸状体、毛 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:12abd29b-5eae-47a2-baae-4059581e7eaa xref: FNA:43d66471-4955-4bc2-a70c-c88e33877c42 xref: FNA:602c5ee8-6634-4093-bd2c-016dde8a350e xref: FNA:6cb9e7af-32a7-413a-8f80-9e40d3ae462a xref: FNA:78121d02-e7db-45eb-b1b7-011d5026beae xref: FNA:881fcb45-5dfd-4d06-8d6f-a111ba5e220a xref: FNA:899a83bf-39bb-4128-b472-b0e27dcf5b35 xref: FNA:8c618dea-f3dd-434f-bb13-23273ea6c143 xref: FNA:93b95b97-0f1a-4d26-9c86-ebede4157269 xref: FNA:99a6f711-b4da-4231-8dce-9ed171b87e9c xref: FNA:9ef3a0eb-f8e4-4a7b-911e-92952fc19956 xref: FNA:aa191087-e979-486f-ad87-0e050a83090f xref: FNA:bb12cad4-db12-4e59-a9fc-1676f2558a0a xref: FNA:c358e298-5926-42d6-8d49-a918cdc72406 xref: FNA:c5765385-917c-465e-83f8-b4fe5d693146 xref: FNA:c751440c-a7b3-4997-aed8-47f8254fd05f xref: FNA:cbb9ceb5-a404-4b5c-9c8f-4cf0ca6bade2 xref: FNA:e6a34ceb-a3e7-49f7-a4ac-cf0ea1552dc4 xref: FNA:ead20a1b-057b-4008-9466-bdb8e283aa82 xref: FNA:f18da584-2b0b-4b03-a614-40140a1cb89e xref: PO_GIT:207 is_a: PO:0009011 ! plant structure relationship: develops_from PO:0000349 ! plant epidermal initial cell relationship: part_of PO:0005679 ! plant epidermis [Term] id: PO:0000349 name: plant epidermal initial cell namespace: plant_anatomy def: "An initial cell (PO:0004011) that is part of an plant epidermis (PO:0005679) and gives rise to specialized cells." [PO:cooperl, TAIR_curator:Leonore_Reiser] subset: CL synonym: "célula inicial de la epidermis (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "epidermal initial (exact)" EXACT [] synonym: "表皮始原細胞 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0004011 ! initial cell relationship: part_of PO:0005679 ! plant epidermis [Term] id: PO:0001081 name: mature plant embryo stage namespace: plant_structure_development_stage def: "A plant embryo development stage (PO:0007631) during the interval between when a plant embryo (PO:0009009) has stopped developmental growth involved in morphogenesis (GO:0060560) and one of the following: the beginning of the seed germination stage (PO:0007057) in seed plants, formation of the first vascular leaf (PO:0009025) in pteridophytes, the beginning of development of a sporangium (PO:0025094) in bryophytes, or the beginning of the formation of a plant organ (PO:0009008) such as a root (PO:0009005), shoot axis (PO:0025029), or vascular leaf (PO:0009025) in a cultured plant embryo (PO:0000010)." [APweb:Glossary, POC:Laurel_Cooper, POC:Ramona_Walls, TAIR_curator:Katica_Ilic] comment: In some seed plants, this occurs some time after the fruit ripening stage (PO:0025502) and after the dispersal of the seed (PO:0009010). This stage may be very short in plants that do not enter a plant embryo dormant stage (PO:0025377). subset: Angiosperm subset: Arabidopsis subset: Maize subset: Poaceae subset: Rice synonym: "embryo stage EM10 (related)" RELATED [GRO:0007177] synonym: "embryo stage EM9 (related)" RELATED [GRO:0007176] synonym: "mature (stage) in Arabidopsis (related)" RELATED [] xref: GRO:0007176 xref: GRO:0007177 xref: PO_GIT:400 is_a: PO:0007631 ! plant embryo development stage [Term] id: PO:0001083 name: inflorescence development stage namespace: plant_structure_development_stage def: "A reproductive shoot system development stage (PO:0025530) that has as primary participant a inflorescence (PO:0009049)." [POC:Laurel_Cooper] synonym: "panicle development (related)" RELATED [GRO:0007157] xref: GRO:0007157 xref: PO_GIT:517 is_a: PO:0025530 ! reproductive shoot system development stage [Term] id: PO:0001097 name: plant zygote stage namespace: plant_structure_development_stage def: "A sporophyte development stage (PO:0007134) that occurs during the interval between fertilization and the first cell division of the plant zygote (PO:0000423)." [POC:curators] comment: Precedes the sporophyte vegetative stage (PO:0007134). Refers to the GO biological process term fertilization (GO:0009566). synonym: "embryo stage EM1 (related)" RELATED [GRO:0007168] synonym: "one cell stage (related)" RELATED [] synonym: "zygote in Arabidopsis (related)" RELATED [] synonym: "zygote stage (broad)" BROAD [] xref: GRO:0007168 xref: PO_GIT:399 is_a: PO:0028002 ! sporophyte development stage [Term] id: PO:0002000 name: stomatal complex namespace: plant_anatomy def: "A portion of shoot system epidermis (PO:0006035) that has as parts two guard cells (PO:0000293) and a stomatal pore (PO:0008032). May also contain subsidiary cells (PO:0000284)." [ISBN:0471245208] subset: TraitNet synonym: "complejo estomático (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "stoma (broad)" BROAD [] synonym: "stomata (broad)" BROAD [] synonym: "stomatal apparatus (exact)" EXACT [FNA:5def9af3-483f-41c5-93e3-fa66839b22f6] synonym: "stomate (exact)" EXACT [FNA:1d7d0bb6-be7e-43e4-8730-6e31b43915b4] synonym: "気孔装置 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:231 is_a: PO:0006035 ! shoot system epidermis [Term] id: PO:0004010 name: meristematic cell namespace: plant_anatomy def: "A native plant cell (PO:0025606) synthesizing protoplasm and producing new cells by division and with only a primary cell wall." [ISBN:0471245208, POC:Laurel_Cooper] subset: CL synonym: "célula meristemática (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "stem cell (exact)" EXACT [] synonym: "分裂組織細胞 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: CL:0000034 xref: PO_GIT:272 is_a: PO:0025606 ! native plant cell [Term] id: PO:0004011 name: initial cell namespace: plant_anatomy alt_id: PO:0000070 def: "A meristematic cell (PO:0004010) that by division gives rise to two cells, one of which remains meristematic, while the other is added to the plant body." [ISBN:0471245208] comment: Initial cells are often part of a portion of tissue that is composed mostly of somewhat older, differentiating cells. The division of an initial cell is often uneven, with the smaller daughter cell remaining meristematic. subset: CL synonym: "célula inicial (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "initial (exact)" EXACT [] synonym: "meristemoid (exact)" EXACT [] synonym: "stem cell (related)" RELATED [] synonym: "始原細胞 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:272 is_a: PO:0004010 ! meristematic cell [Term] id: PO:0004513 name: sapwood namespace: plant_anatomy def: "A portion of secondary xylem (PO:0005848) that has as parts living secondary xylem parenchyma cells (PO:0004525)." [ISBN:0471245208, POC:curators] comment: Sapwood contains reserve materials and may function in the conduction of water and minerals (xylem sap (PO:0025539)). It is generally lighter colored than the heartwood (PO:0004512) and is located between the heartwood and the vascular cambium (PO:0005598) of a shoot axis (PO:0025029) or root (PO:0009005). Sapwood forms during a secondary xylem development stage (PO:0025427). subset: TraitNet synonym: "albura (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "液材、辺材 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0005848 ! secondary xylem relationship: part_of PO:0025004 ! plant axis [Term] id: PO:0004518 name: bark namespace: plant_anatomy def: "A portion of plant tissue (PO:0009007) outside the vascular cambium (PO:0005598) or the xylem (PO:0005352); in older trees may be divided into dead outer bark and living inner bark, which consists of secondary phloem (PO:0005043)." [ISBN:0471245208, POC:curators] subset: TraitNet synonym: "corteza (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "portion of bark tissue (exact)" EXACT [] synonym: "樹皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009007 ! portion of plant tissue relationship: develops_from PO:0005043 ! secondary phloem [Term] id: PO:0004532 name: secondary xylem parenchyma namespace: plant_anatomy def: "A portion of parenchyma (PO:0005421) tissue that is part of a portion of secondary xylem (PO:0005848) and has as parts secondary xylem parenchyma cells (PO:0004525)." [ISBN:0471245194] synonym: "parénquima de la madera (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "wood parenchyma (exact)" EXACT [] synonym: "二次木部柔組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:455 is_a: PO:0005421 ! parenchyma intersection_of: PO:0005421 ! parenchyma intersection_of: part_of PO:0005848 ! secondary xylem relationship: part_of PO:0005848 ! secondary xylem [Term] id: PO:0004542 name: rhizome namespace: plant_anatomy def: "A swollen shoot axis (PO:0025029) that grows horizontally at or below the substrate surface and produces shoots above and roots or rhizoids below." [POC:curators] comment: In ferns and many monocots, a rhizome is a primary axis (stem), while in other species, it is a branch. Usually produces scale-like leaves. subset: reference subset: TraitNet synonym: "rizoma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "rootstock (related)" RELATED [FNA:7a04b02c-8ac5-410a-99cd-b68ba80e8f14] synonym: "根茎=root stock (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:7a04b02c-8ac5-410a-99cd-b68ba80e8f14 xref: PO_GIT:142 is_a: PO:0025029 ! shoot axis [Term] id: PO:0004543 name: shoot axis tuber namespace: plant_anatomy def: "A shoot axis (PO:0025029) that develops from a branch (PO:0025073) and is radially enlarged for storage." [POC:curators, POC:Laurel_Cooper] comment: Functions in storage of photosynthate metabolites. This term should be used for tubers derived from branches, as found in Solanum spp. (e.g. potato) or Dioscorea spp. (e.g. yam) and other species. Use the term tuberous root tuber (PO:0025476) for tubers derived from roots, such as those found in Cassava, Ipomoea, or Hemerocallis. subset: Potato subset: reference subset: TraitNet synonym: "diaspore (broad)" BROAD [] synonym: "shoot axis branch tuber (exact)" EXACT [POC:curators] synonym: "tubérculo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "tuber branch (exact)" EXACT [] synonym: "シュート軸塊茎 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:127 is_a: PO:0025029 ! shoot axis is_a: PO:0025522 ! tuber relationship: develops_from PO:0025073 ! branch [Term] id: PO:0004545 name: shoot-borne shoot system namespace: plant_anatomy def: "A shoot system that is initiated from a shoot." [POC:curators] subset: reference synonym: "branch (related)" RELATED [] synonym: "sistema de epiblasto (epiblastema) que nace en el epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "sucker (broad)" BROAD [] synonym: "turion (broad)" BROAD [FNA:da7c2bd5-34b4-42aa-a036-7b5f71f66d36] synonym: "シュート由来苗条系 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:da7c2bd5-34b4-42aa-a036-7b5f71f66d36 is_a: PO:0009006 ! shoot system [Term] id: PO:0004547 name: subterranean shoot axis tuber namespace: plant_anatomy def: "A shoot axis tuber (PO:0004543) that develops below ground." [POC:curators, POC:Laurel_Cooper] comment: Functions in storage of photosynthate metabolites. This term should be used for tubers derived from branches, as found in Solanum spp. (e.g. potato) or Dioscorea spp. (e.g. yam) and other species. Use the term tuberous root tuber (PO:0025476) for tubers derived from roots, such as those found in Cassava, Ipomoea, or Hemerocallis. subset: Potato synonym: "tubérculo subterráneo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "地下塊茎 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:615 is_a: PO:0004543 ! shoot axis tuber [Term] id: PO:0004703 name: carpel primordium namespace: plant_anatomy def: "A phyllome primordium (PO:0025128) that develops from a carpel anlagen (PO:0006005) and is committed to the development of a carpel (PO:0009030)." [POC:curators] synonym: "carpel primordia (exact, plural)" EXACT [] synonym: "portion of carpel primordium tissue (exact)" EXACT [] synonym: "primordio de carpelo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "心皮原基(可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 xref: PO_GIT:466 is_a: PO:0025128 ! phyllome primordium is_a: PO:0025477 ! floral organ primordium relationship: develops_from PO:0006005 ! carpel anlagen [Term] id: PO:0004705 name: stamen primordium namespace: plant_anatomy def: "A phyllome primordium (PO:0025128) that develops from a stamen anlagen (PO:0025486) and is committed to the development of a stamen (PO:0009029)." [POC:curators] synonym: "portion of stamen primordium tissue (exact)" EXACT [] synonym: "primordio de estambre (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "stamen primordia (exact, plural)" EXACT [] synonym: "雄蕊原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 xref: PO_GIT:466 is_a: PO:0025128 ! phyllome primordium is_a: PO:0025477 ! floral organ primordium relationship: develops_from PO:0025486 ! stamen anlagen [Term] id: PO:0004709 name: axillary bud namespace: plant_anatomy def: "A bud (PO:0000055) that develops from an axillary bud meristem (PO:0000232)." [POC:curators] subset: reference synonym: "yema axilar (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "腋芽 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:124 is_a: PO:0000055 ! bud [Term] id: PO:0004712 name: axillary vegetative bud namespace: plant_anatomy def: "An axillary bud (PO:0004712) that develops into a shoot system (PO:0009006) that has as organ parts only vegetative organs." [POC:curators] synonym: "yema vegetativa axilar (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "腋枝芽 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:124 xref: PO_GIT:128 is_a: PO:0000058 ! vegetative bud is_a: PO:0004709 ! axillary bud [Term] id: PO:0004713 name: terminal bud namespace: plant_anatomy def: "A bud that develops from a shoot apical meristem." [POC:curators] subset: reference synonym: "yema terminal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "頂芽 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:124 is_a: PO:0000055 ! bud [Term] id: PO:0005001 name: basal axillary shoot system namespace: plant_anatomy def: "An axillary shoot system (PO:0006343) that is part of a stem base (PO:0008039)." [Gramene:Anuradha_Pujar, POC:Laurel_Cooper] comment: Called a tiller in the Poaceae. synonym: "basal axillary branch (related)" RELATED [] synonym: "epiblasto (epiblastema) axilar basal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "ratoon (related)" RELATED [] synonym: "tiller (narrow)" NARROW [] synonym: "基底腋枝系 (Japanese, exact) (exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:496 is_a: PO:0006343 ! axillary shoot system [Term] id: PO:0005005 name: shoot axis internode namespace: plant_anatomy def: "A cardinal organ part (PO:0025001) of a shoot axis (PO:0025029) that is between two shoot axis nodes (PO:0005004)." [POC:curators, POC:Laurel_Cooper] subset: Potato subset: reference subset: TraitNet synonym: "internodo del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "シュート節間 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:146 is_a: PO:0025001 ! cardinal organ part relationship: part_of PO:0025029 ! shoot axis [Term] id: PO:0005029 name: root primordium namespace: plant_anatomy def: "A primordium (PO:0025127) that develops from a root anlagen (PO:0025433) and is committed to the development of a root (PO:0009005)." [ISBN:0521288959, POC:curators] comment: A root primordium may arise from cells of a pericycle (PO:0006203) in a root in most seed plant (pericyclic lateral root primordium; PO:0025492), from cells of an endodermis (PO:0000252) in ferns and some seed plants (non-pericyclic lateral root primordium: PO:0025493), or from cells of a shoot axis (PO:0025029), in the case of a basal root primordium (PO:0025479) or shoot-borne root primordium (PO:0025480). Transition from root primordium to root occurs with the formation of a root cap (PO:0020123), shortly after the development of a root apical meristem (PO:0020147). synonym: "portion of root primordium tissue (exact)" EXACT [] synonym: "primordio de raíz (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "root primordia (exact, plural)" EXACT [] synonym: "根原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:467 is_a: PO:0025127 ! primordium relationship: develops_from PO:0025433 ! root anlagen [Term] id: PO:0005043 name: secondary phloem namespace: plant_anatomy def: "A portion of phloem (PO:0005417) tissue that develops from a vascular cambium (PO:0005598)." [ISBN:0471245208] comment: Secondary phloem develops as part of secondary growth (GO:0080117). subset: TraitNet synonym: "floema secundario (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "portion of secondary phloem tissue (exact)" EXACT [] synonym: "二次師部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:433 is_a: PO:0005417 ! phloem is_a: PO:0025409 ! secondary vascular tissue [Term] id: PO:0005352 name: xylem namespace: plant_anatomy def: "A portion of vascular tissue (PO:0009015) that has as part one or more tracheary elements (PO:0000290)." [ISBN:0471245194] comment: Functions in the translocation of water and solutes from roots (PO:0009005) to the shoot system (PO:0009006) and in support. Tracheary elements have lignified cell walls with secondary thickening and are dead at maturity. subset: TraitNet synonym: "portion of xylem tissue (exact)" EXACT [] synonym: "xilema (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "木質部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:434 is_a: PO:0009015 ! portion of vascular tissue [Term] id: PO:0005417 name: phloem namespace: plant_anatomy def: "A portion of vascular tissue (PO:0009015) that has as parts sieve elements (PO:0025406)." [ISBN:0471245208, POC:curators] comment: Functions in the conduction of organic substances in vascular plants. subset: TraitNet synonym: "floema (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "portion of phloem tissue (exact)" EXACT [] synonym: "師部、師管 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:433 is_a: PO:0009015 ! portion of vascular tissue [Term] id: PO:0005421 name: parenchyma namespace: plant_anatomy def: "A portion of ground tissue (PO:0025059) composed of polyhedral cells typically with thin, non-lignified cellulosic cell walls and nucleate, living protoplasts." [POC:curators] comment: Parenchyma contains relatively unspecialized cells. subset: TraitNet synonym: "parénquima (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "portion of parenchyma tissue (exact)" EXACT [] synonym: "portion of parenchymatous tissue (exact)" EXACT [] synonym: "柔組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:107 is_a: PO:0025059 ! portion of ground tissue [Term] id: PO:0005597 name: cambium namespace: plant_anatomy def: "A lateral meristem (PO:0020145) that has as part a single layer of cambial initial cells (PO:0000295) and their derivatives, arranged orderly in radial files." [ISBN:047125208] comment: This term is applied to only two types of meristems: vascular cambium (PO:0005598) and cork cambium/phellogen (PO:0005599). subset: TraitNet synonym: "cambium (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "形成層 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:437 is_a: PO:0020145 ! lateral meristem [Term] id: PO:0005598 name: vascular cambium namespace: plant_anatomy def: "A cambium (PO:0005597) that is located between and gives rise to secondary xylem (PO:0005848) and secondary phloem (PO:0005043)." [ISBN:047125208] comment: A vascular cambium produces cells in both directions, centrifugally and centrifically, leading to an increase in the cross-sectional area of a plant axis (PO:0025004). subset: TraitNet synonym: "cambium vascular (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "維管束形成層 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:437 is_a: PO:0005597 ! cambium [Term] id: PO:0005679 name: plant epidermis namespace: plant_anatomy def: "A portion of plant tissue (PO:0009007) composed of plant epidermal cells (PO:0004013) that develops from the protoderm (PO:0006210) and covers the surface of a plant structure (PO:0009011)." [POC:curators] comment: The epidermis can be composed of one or more layers of cells. In some species of vascular plants, the epidermis, which is a primary tissue, is replaced by periderm, which is secondary tissue, later in development. The epidermis can also include trichomes, stomatal pores, root hairs, and rhizoids. subset: TraitNet synonym: "dermal tissue (exact)" EXACT [] synonym: "epidermal layer (exact)" EXACT [] synonym: "epidermides (exact, plural)" EXACT [FNA:35df04e5-fde5-465e-b79e-ae7d5e1537bb] synonym: "epidermis (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "epidermises (exact, plural)" EXACT [FNA:0d1bd0e6-c039-4de3-a162-68299a2f342a] synonym: "multiseriate epidermis (related)" RELATED [] synonym: "portion of epidermal tissue (exact)" EXACT [] synonym: "表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:109 is_a: PO:0009007 ! portion of plant tissue relationship: develops_from PO:0006210 ! protoderm [Term] id: PO:0005848 name: secondary xylem namespace: plant_anatomy def: "A portion of xylem (PO:0005352) tissue that develops from a vascular cambium (PO:0005598)." [ISBN:0471245194] comment: Secondary xylem develops as part of secondary growth (GO:0080117). Secondary xylem is the wood of gymnosperm and dicot angiosperm trees, shrubs, and lianas. May be organized into axial (PO:0025410) and ray (PO:0025411) systems. Secondary xylem is often part of a shoot axis (PO:0025029) or a root (PO:0009005) but may occur in other organs. Some monocots have a primary thickening meristem (PO:0005039), located near the shoot apical meristem (PO:0020148), that gives the appearance of secondary growth and may produce lignified tissue that appears woody but is not composed of secondary xylem. Tracheary elements in secondary xylem (PO:0000290) have lignified cell walls with secondary thickening and are dead at maturity. subset: TraitNet synonym: "portion of secondary xylem tissue (exact)" EXACT [] synonym: "wood (exact)" EXACT [] synonym: "xilema secundario (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "二次木部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:164 xref: PO_GIT:434 is_a: PO:0005352 ! xylem is_a: PO:0025409 ! secondary vascular tissue [Term] id: PO:0006001 name: phyllome namespace: plant_anatomy def: "A lateral plant organ (PO:0009008) produced by a shoot apical meristem (PO:0020148)." [POC:curators] subset: reference subset: TraitNet synonym: "filoma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "フィロム、葉(的）器官 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009008 ! plant organ relationship: develops_from PO:0025128 ! phyllome primordium relationship: part_of PO:0009006 ! shoot system [Term] id: PO:0006005 name: carpel anlagen namespace: plant_anatomy def: "A phyllome anlagen (PO:0025430) that will give rise to a carpel primordium (PO:0004703) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229)." [PMID:14729915, POC:curators] synonym: "esbozo de carpelo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "心皮原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:427 is_a: PO:0025430 ! phyllome anlagen relationship: part_of PO:0000229 ! flower meristem [Term] id: PO:0006016 name: leaf epidermis namespace: plant_anatomy def: "A portion of phyllome epidermis (PO:0025157) that is part of a leaf (PO:0025034)." [POC:curators] comment: If you are annotating to this term, please add an additional annotation to vascular leaf (PO:0009025) or non-vascular leaf (PO:0025075), depending on the species. All annotations for angiosperms, gymnosperms, and pteridophytes should go to vascular leaf and all annotations for bryophytes should go to non-vascular leaf. synonym: "epidermis de la hoja (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "foliage leaf epidermis (exact)" EXACT [] synonym: "phyllid epidermis (exact)" EXACT [] synonym: "葉表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025157 ! phyllome epidermis intersection_of: PO:0025157 ! phyllome epidermis intersection_of: part_of PO:0025034 ! leaf relationship: part_of PO:0025034 ! leaf [Term] id: PO:0006035 name: shoot system epidermis namespace: plant_anatomy def: "A portion of plant epidermis (PO:0005679) that is part of a shoot system (PO:0009006) and arises from the meristem L1 layer (PO:0009020)." [ISBN:0471245208, POC:curators, POC:Laurel_Cooper] comment: Often interrupted by stomatal complexes (PO:0002000) and other structures. The shoot system epidermis is different from the root epidermis (PO:0006036) in its origin, function and structure. synonym: "epidermis del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "シュート表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:111 is_a: PO:0005679 ! plant epidermis intersection_of: PO:0005679 ! plant epidermis intersection_of: part_of PO:0009006 ! shoot system relationship: develops_from PO:0009020 ! meristem L1 layer relationship: part_of PO:0009006 ! shoot system [Term] id: PO:0006036 name: root epidermis namespace: plant_anatomy alt_id: PO:0006037 def: "A portion of plant epidermis (PO:0005679) that is part of a root (PO:0009005)." [ISBN:0080374913] comment: The root epidermis is different from the shoot epidermis in its origin, function and structure. synonym: "epiblem (related)" RELATED [] synonym: "epidermis de la raíz (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "rhizodermis (related)" RELATED [] synonym: "根表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:111 is_a: PO:0005679 ! plant epidermis intersection_of: PO:0005679 ! plant epidermis intersection_of: part_of PO:0009005 ! root relationship: part_of PO:0009005 ! root [Term] id: PO:0006041 name: petal epidermis namespace: plant_anatomy def: "A portion of phyllome epidermis (PO:0025157) that is part of a petal (PO:0009032)." [POC:curators] synonym: "epidermis del pétalo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花弁表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025157 ! phyllome epidermis intersection_of: PO:0025157 ! phyllome epidermis intersection_of: part_of PO:0009032 ! petal relationship: part_of PO:0009032 ! petal [Term] id: PO:0006048 name: seed coat epidermis namespace: plant_anatomy def: "A portion of plant epidermis (PO:0005679) that is part of a seed coat (PO:0009088)." [POC:Ramona_Walls] synonym: "epidermis de la cubierta de la semilla (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "種子種皮表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:111 is_a: PO:0005679 ! plant epidermis intersection_of: PO:0005679 ! plant epidermis intersection_of: part_of PO:0009088 ! seed coat relationship: part_of PO:0009088 ! seed coat [Term] id: PO:0006079 name: shoot system meristem namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) that is part of a shoot system (PO:0009006)." [Gramene:Pankaj_Jaiswal, POC:Laurel_Cooper] subset: TraitNet synonym: "meristema del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "シュート分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:472 xref: PO_GIT:583 is_a: PO:0009013 ! portion of meristem tissue relationship: part_of PO:0009006 ! shoot system [Term] id: PO:0006089 name: anther primordium namespace: plant_anatomy def: "A floral structure primordium (PO:0025477) that is committed to the development of an anther (PO:0009066)." [POC:curators] synonym: "portion of anther primordium tissue (exact)" EXACT [] synonym: "primordio de la antera (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "葯原基(可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 is_a: PO:0025477 ! floral organ primordium [Term] id: PO:0006109 name: pith namespace: plant_anatomy def: "A maximal portion of parenchyma (PO:0005421) in the center of a shoot axis (PO:0025029) or root (PO:0009005)." [ISBN:0080280307] subset: TraitNet synonym: "médula (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "medulla (exact)" EXACT [ISBN:0471244554] synonym: "髄 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:114 is_a: PO:0005421 ! parenchyma [Term] id: PO:0006210 name: protoderm namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) that is the outer layer of an apical meristem (PO:0020144), or the outer layer of a plant embryo proper (PO:0000001), and gives rise to a portion of epidermis (PO:0005679)." [ISBN:0471245208, POC:Laurel_Cooper] comment: A protoderm may or may not arise from independent initial cells (PO:0004011). Some researchers also refer to it as an epidermis in a meristematic state. synonym: "dermatogen cell (related)" RELATED [] synonym: "portion of protoderm tissue (exact)" EXACT [] synonym: "protodermis (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "前表皮、原表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:125 is_a: PO:0009013 ! portion of meristem tissue [Term] id: PO:0006342 name: infructescence namespace: plant_anatomy def: "A reproductive shoot system (PO:0025082) that develops from an inflorescence (PO:0009049) and has as parts each infructescence axis (PO:0025242) and all of the fruits (PO:0009001) borne by those axes." [NYBG:Brandon_Sinn, POC:Laurel_Cooper, POC:Ramona_Walls] subset: Angiosperm subset: Musa synonym: "banana bunch (narrow)" NARROW [CO_125:0000014] synonym: "fruit bunch (related)" RELATED [] synonym: "infructescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "果序 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:260 xref: PO_GIT:261 xref: PO_GIT:71 is_a: PO:0025082 ! reproductive shoot system is_a: UBERON:0001062 ! anatomical entity relationship: develops_from PO:0009049 ! inflorescence relationship: has_part PO:0009001 ! fruit [Term] id: PO:0006343 name: axillary shoot system namespace: plant_anatomy def: "A shoot-borne shoot system (PO:0004545) that develops from an axillary bud (PO:0004709)." [POC:curators] subset: Musa synonym: "axillary branch (related)" RELATED [] synonym: "Musa sucker (narrow)" NARROW [CO_125:0000042] synonym: "sistema axilar del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "腋苗条系 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:262 xref: PO_GIT:518 is_a: PO:0004545 ! shoot-borne shoot system relationship: develops_from PO:0004709 ! axillary bud [Term] id: PO:0006418 name: ear peduncle namespace: plant_anatomy def: "A peduncle of a maize ear, below the lowest ear node." [Gramene:Pankaj_Jaiswal] subset: Maize synonym: "pedúnculo de la espiga (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "shank (related)" RELATED [] synonym: "Zea lateral branch (related)" RELATED [] synonym: "雌穂花柄 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009053 ! peduncle relationship: part_of PO:0020136 ! ear inflorescence [Term] id: PO:0007033 name: whole plant development stage namespace: plant_structure_development_stage def: "A plant structure development stage (PO:0009012) that has as primary participant a whole plant (PO:0000003)." [POC:curators] subset: TraitNet synonym: "cereal plant growth stage ontology (GRO:0007199) (related)" RELATED [] synonym: "maize growth stage (GRO:0007002) (related)" RELATED [] synonym: "plant growth stages in Arabidopsis (TAIR:0000021) (related)" RELATED [] synonym: "rice growth stage (GRO:0007040) (related)" RELATED [] synonym: "Solanaceae whole plant growth stages (SGN:0000001) (related)" RELATED [] synonym: "sorghum growth stage (GRO:0007124) (related)" RELATED [] synonym: "wheat, barley and oat growth stage (GRO:0007156) (related)" RELATED [] xref: PO_GIT:390 is_a: PO:0009012 ! plant structure development stage relationship: has_participant PO:0000003 ! whole plant [Term] id: PO:0007134 name: sporophyte vegetative stage namespace: plant_structure_development_stage def: "A sporophyte development stage (PO:0028002) that occurs during the interval between the first division of a plant zygote (PO:0000423) and the formation of a sporangium (PO:0025094)." [POC:curators] comment: Succeeds a plant zygote stage (PO:0001097). A sporophyte may begin to senesce or die from other causes before producing sporangia. Developmental vegetative growth (GO:0080186) can also occur during the reproductive stage. synonym: "A vegetative growth in Solanaceae (related)" RELATED [SGN:0000002] synonym: "A-vegetative stage in rice (related)" RELATED [GRO:0007139] synonym: "vegetative in Arabidopsis (related)" RELATED [TAIR:0000305] xref: GRO:0007139 xref: PO_GIT:395 xref: SGN:0000002 xref: TAIR:0000305 is_a: PO:0028002 ! sporophyte development stage relationship: preceded_by PO:0001097 ! plant zygote stage [Term] id: PO:0007631 name: plant embryo development stage namespace: plant_structure_development_stage alt_id: PO:0007020 def: "A sporophyte vegetative stage (PO:0007134) that occurs during the interval between the first cell division of a plant zygote (PO:0000423) and one of the following: the beginning of the seed germination stage (PO:0007057) in seed plants, formation of the first vascular leaf (PO:0009025) in pteridophytes, the beginning of development of a sporangium (PO:0025094) in bryophytes, or the beginning of the formation of a plant organ (PO:0009008) such as a root (PO:0009005), shoot axis (PO:0025029), or vascular leaf (PO:0009025) in a cultured plant embryo (PO:0000010)." [POC:curators, POC:Laurel_Cooper] comment: The plant embryo stage generally starts after the first division of a plant zygote (PO:0000423), but in the case of a nucellar (adventitious) plant embryo (PO:0004537), somatic plant embryo (PO:0025302), microspore-derived cultured plant embryo (PO:0025305), and other embryos that arise through apogamy, it begins after the division of a single cell that is not a zygote. The end of the embryo stage varies among taxa. No plant species undergoes all of the sub-stages of plant embryo development stage listed here. subset: Angiosperm subset: Arabidopsis subset: Maize subset: Rice synonym: "embryo development stage (related)" RELATED [] synonym: "embryo stage (broad)" BROAD [] synonym: "embryonic in Arabidopsis (related)" RELATED [] xref: PO_GIT:400 is_a: PO:0007134 ! sporophyte vegetative stage [Term] id: PO:0008016 name: vegetative shoot apical meristem namespace: plant_anatomy def: "A shoot apical meristem (PO:0020148) that gives rise to the apical growth of vegetative tissues and organs." [Gramene:Chih-Wei_Tung] synonym: "meristema vegetativo apical del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "vegetative meristem (related)" RELATED [] synonym: "栄養シュート頂端分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:36 is_a: PO:0020148 ! shoot apical meristem [Term] id: PO:0008028 name: reproductive shoot apical meristem namespace: plant_anatomy def: "A shoot apical meristem (PO:0020148) that gives rise to the apical growth of reproductive tissues and organs." [Gramene:Chih-Wei_Tung] synonym: "meristema apical reproductivo del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "生殖シュート頂端 分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:36 is_a: PO:0020148 ! shoot apical meristem relationship: part_of PO:0025222 ! reproductive shoot apex [Term] id: PO:0009001 name: fruit namespace: plant_anatomy alt_id: PO:0020067 alt_id: PO:0020068 alt_id: PO:0020069 alt_id: PO:0020070 alt_id: PO:0020071 alt_id: PO:0020072 alt_id: PO:0020073 alt_id: PO:0020074 alt_id: PO:0020076 alt_id: PO:0020077 alt_id: PO:0020078 alt_id: PO:0020079 alt_id: PO:0020080 alt_id: PO:0020082 alt_id: PO:0020083 alt_id: PO:0020087 alt_id: PO:0020107 def: "A multi-tissue plant structure (PO:0025496) that develops from a gynoecium (PO:0009062), or a single carpel (PO:0009030), and at maturity may have as parts one or more seeds (PO:0009010)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, POC:curators, POC:Laurel_Cooper] comment: A fruit (PO:0009001) may contain additional plant structures (PO:0009011) that were part of a flower (PO:0009046) and mature along with the gynoecium, such as a receptacle (PO:0009064). A fruit may develop without fertilization in cases of parthenocarpy, apomixis, or other hormone-induced conditions and may not always contain seeds (PO:0009010). When annotating to fruit (PO:0009001) that are referred to as ‘aggregate’, ‘multiple’, or ‘compound’, please annotate directly to the appropriate plant structure, such as receptacle, hypanthium (PO:0009065) or infructescence (PO:0006342). Fruits only occur in angiosperms. subset: Angiosperm subset: Arabidopsis subset: Maize subset: Poaceae subset: Rice subset: TraitNet synonym: "aggregate fruit (broad)" BROAD [] synonym: "coenocarp (narrow)" NARROW [FNA:c13b1312-1cc5-4ace-98e2-fde12aec09da] synonym: "compound fruit (broad)" BROAD [] synonym: "dehiscent fruit (broad)" BROAD [] synonym: "diaspore (broad)" BROAD [] synonym: "frucht (exact, German)" EXACT German [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere] synonym: "fruto (exact, Spanish)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "indehiscent fruit (broad)" BROAD [] synonym: "multiple fruit (broad)" BROAD [] synonym: "propagule (broad)" BROAD [] synonym: "syncarp (narrow)" NARROW [FNA:67fa41ae-b735-4d89-b5db-7631b873ef7a] synonym: "果実 (exact, Japanese)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:67fa41ae-b735-4d89-b5db-7631b873ef7a xref: FNA:c13b1312-1cc5-4ace-98e2-fde12aec09da xref: PO_GIT:76 is_a: PO:0025496 ! multi-tissue plant structure relationship: develops_from PO:0009062 ! gynoecium [Term] id: PO:0009002 name: plant cell namespace: plant_anatomy def: "A cell which is a plant structure (PO:0009011)." [CL:0000000, POC:curators] comment: Applies to cells that are living or dead at maturity (e.g., fiber cell or tracheid) and includes any external encapsulating structures (if present) such as the plasma membrane and the plant-type cell wall. Definition of cell GO:0005623: "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope". GO:0009505. Definition of plant-type cell wall (GO:0009505): A more or less rigid structure lying outside the cell membrane of a cell and composed of cellulose and pectin and other organic and inorganic substances, synonym; exact: cellulose and pectin-containing cell wall. subset: CL subset: reference subset: TraitNet synonym: "célula vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "cell (broad)" BROAD [] synonym: "植物細胞 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: GO:0005623 xref: PO_GIT:56 is_a: PO:0009011 ! plant structure disjoint_from: PO:0009007 ! portion of plant tissue disjoint_from: PO:0009008 ! plant organ disjoint_from: PO:0025001 ! cardinal organ part disjoint_from: PO:0025007 ! collective plant organ structure [Term] id: PO:0009005 name: root namespace: plant_anatomy alt_id: PO:0003006 def: "A plant axis (PO:0025004) that lacks shoot axis nodes (PO:0005004) and usually grows indeterminately." [ISBN:978-0879015329, ISBN:9780964022157, NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, POC:curators, POC:Laurel_Cooper] comment: Roots function in the absorption of water and inorganic nutrients, anchoring the plant body to the substrate and supporting it, storage of food and nutrients, and vegetative reproduction. The roots of most vascular plant species enter into symbiosis with soil-borne microorganisms. Roots are usually positively geotropic and found underground, although there are many exceptions such as the aerial roots of orchids. Roots often form secondary thickening from the root lateral meristem (PO:0006308). Commonly thought of as one of the three basic parts of the plant body, along with the shoot axis (PO:0025029) and leaves (PO:0025034). subset: Angiosperm subset: Gymnosperms subset: Maize subset: Musa subset: Potato subset: reference subset: Rice subset: Tomato subset: TraitNet synonym: "aerial root (narrow)" NARROW [] synonym: "climbing root (narrow)" NARROW [FNA:bf0ce902-e91c-401a-92a8-26b20142ce5f] synonym: "raíz (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "radices (exact, plural)" EXACT [FNA:3c46e84c-23e4-416b-91cd-2f7c42e4b13d] synonym: "radix (exact)" EXACT [FNA:e6315684-fc99-4976-b39d-b356c4b7e7fd] synonym: "根 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:bf0ce902-e91c-401a-92a8-26b20142ce5f xref: PO_GIT:578 is_a: PO:0025004 ! plant axis relationship: develops_from PO:0005029 ! root primordium relationship: part_of PO:0025025 ! root system [Term] id: PO:0009006 name: shoot system namespace: plant_anatomy def: "A collective plant organ structure (PO:0025007) that produces shoot-borne portions of meristem tissue (PO:0009013) and the plant structures (PO:0009011) that arise from them." [POC:curators, POC:Laurel_Cooper] comment: The shoot system is generally used to refer to the above-ground plant parts, although some plants have parts of their shoot system underground. For example, a rhizome (PO:0004542), bulb (PO:0025356), a corm (PO:0025355) or a subterranean tuber (PO:0004547), as in Solanum tuberosum (potato) or yam, are all part of the shoot system. subset: reference subset: TraitNet synonym: "Poaceae crown (related)" RELATED [] synonym: "shoot (related)" RELATED [] synonym: "sistema de epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "thalli (related)" RELATED Plural [FNA:d1431b5c-7b86-46a0-8d3c-bd426fe12c85] synonym: "thallus (related)" RELATED [FNA:02756ad4-a09c-48d7-8754-903254e557a9] synonym: "tree crown (narrow)" NARROW [] synonym: "シュート系、苗条系 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:02756ad4-a09c-48d7-8754-903254e557a9 xref: FNA:d1431b5c-7b86-46a0-8d3c-bd426fe12c85 xref: PO_GIT:135 is_a: PO:0025007 ! collective plant organ structure disjoint_from: PO:0025025 ! root system [Term] id: PO:0009007 name: portion of plant tissue namespace: plant_anatomy def: "A plant structure (PO:0009011) that consists predominantly of similarly specialized plant cells (PO:0009002) of one or more types." [POC:curators, TAIR_curator:Leonore_Reiser] comment: A portion of plant tissue may contain one or several types of cells that are organized in a specific spatial arrangement into a structural unit (which includes a mass of callus) and may include an intercellular matrix. May include other types of isolated cells, such as idioblasts. subset: reference subset: TraitNet synonym: "plant tissue (related)" RELATED [] synonym: "porción de un tejido vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "portion of tissue (broad)" BROAD [] synonym: "tissue (broad)" BROAD [] synonym: "植物組織の一部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:59 is_a: PO:0009011 ! plant structure disjoint_from: PO:0009008 ! plant organ disjoint_from: PO:0025001 ! cardinal organ part disjoint_from: PO:0025007 ! collective plant organ structure [Term] id: PO:0009008 name: plant organ namespace: plant_anatomy def: "A multi-tissue plant structure (PO:0025496) that is a functional unit, is a proper part of a whole plant (PO:0000003), and includes portions of plant tissue (PO:0009007) of at least two different types that derive from a common developmental path." [POC:curators] comment: Examples include stem (PO:0009047), leaf (PO:0025034), and root (PO:0009005). May include individual plant cells (PO:0009002) that are not part of a portion of plant tissue (e.g., idioblasts, PO:0000283). A plant organ may have one or more different plant organs as parts, such as a sporophyll (PO:0009026) that may have as part a sporangium (PO:0025094) or a carpel (PO:0009030) that may have as part a plant ovule (PO:0020003). subset: TraitNet synonym: "órgano vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "compound plant organ (related)" RELATED [] synonym: "organ (broad)" BROAD [] synonym: "simple plant organ (related)" RELATED [PATO:01503] synonym: "植物 器官 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PATO:01503 xref: PO_GIT:55 is_a: PO:0025496 ! multi-tissue plant structure [Term] id: PO:0009009 name: plant embryo namespace: plant_anatomy def: "A whole plant (PO:0000003) that participates in the plant embryo stage (PO:0007631)." [POC:curators] comment: A plant embryo is generally formed after the first division of a plant zygote (PO:0000423), but in the case of a nucellar (adventitious) plant embryo (PO:0004537), somatic plant embryo (PO:0025302), microspore-derived cultured plant embryo (PO:0025305), and other embryos that arise through apogamy, it begins after the division of a single cell that is not a zygote. The end of the embryo stage varies among taxa; the beginning of a seed germination stage (PO:0007057) in seed plants, formation of the first vascular leaf (PO:0009025) in pteridophytes, the beginning of development of a sporangium (PO:0025094) in bryophytes, or the beginning of the formation of a plant organ (PO:0009008) such as a root (PO:0009005), shoot axis (PO:0025029), or vascular leaf (PO:0009025) in a cultured plant embryo (PO:0000010). synonym: "embrión (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "embryo (broad)" BROAD [] synonym: "germ (related)" RELATED [] synonym: "植物胚 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:92 is_a: PO:0000003 ! whole plant [Term] id: PO:0009010 name: seed namespace: plant_anatomy def: "A multi-tissue plant structure (PO:0025496) that develops from a plant ovule (PO:0020003) and has as parts a plant embryo (PO:0009009) enclosed in a seed coat (PO:0009088)." [POC:curators] comment: A seed generally develops from an ovule (PO:0020003) after fertilization, but may develop without fertilization in the case of apogamy (e.g., adventitious embryos or somatic embryos). A seed is a reproductive unit of seed plants (gymnosperms, angiosperms, and fossil pteridosperms). subset: Angiosperm subset: Arabidopsis subset: Citrus subset: Gymnosperms subset: Maize subset: Poaceae subset: Rice subset: Tomato subset: TraitNet synonym: "diaspore (broad)" BROAD [] synonym: "pyrene (narrow)" NARROW [FNA:f5c50e73-61e3-48ec-b918-6f85b3f40738] synonym: "semilla (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "種子 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:f5c50e73-61e3-48ec-b918-6f85b3f40738 xref: PO_GIT:405 is_a: PO:0025496 ! multi-tissue plant structure relationship: develops_from PO:0020003 ! plant ovule relationship: has_part PO:0009009 ! plant embryo [Term] id: PO:0009011 name: plant structure namespace: plant_anatomy def: "A plant anatomical entity (PO:0025131) that is, or was, part of a plant, or was derived from a part of a plant." [CARO:0000003, PO:cooperl, POC:curators] comment: 'Part' includes both proper parts and the whole plant. CARO:0000003 'connected anatomical structure' is defined as: Material anatomical entity that is a single connected structure with inherent 3D shape, generated by coordinated expression of the organism's own genome. subset: TraitNet synonym: "estructura vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "植物 構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:57 is_a: PO:0025131 ! plant anatomical entity [Term] id: PO:0009012 name: plant structure development stage namespace: plant_structure_development_stage alt_id: PO:0007021 def: "A stage in the life of a plant structure (PO:0009011) during which the plant structure undergoes developmental processes." [BFO:0000003, GO:0032502, POC:curators] comment: Refers to GO:0032502 'developmental process', which includes growth, differentiation, and senescence, and BFO:0000003 'ocurrent'. subset: TraitNet synonym: "Arabidopsis growth (related)" RELATED [TAIR:0000205] synonym: "etapa de desarrollo de estructura vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "plant growth and development stage (exact)" EXACT [] xref: PO_GIT:185 xref: TAIR:0000205 is_a: BFO:0000015 ! process [Term] id: PO:0009013 name: portion of meristem tissue namespace: plant_anatomy def: "A portion of plant tissue (PO:0009007) in which plant cells (PO:0009002) have retained their embryonic characteristics, or have reverted to them secondarily, and that divide to produce new cells that can undergo differentiation to form mature tissues, i.e. they have a capacity for morphogenesis and growth." [APweb:Glossary, Gramene:Pankaj_Jaiswal] subset: TraitNet synonym: "meristem (exact)" EXACT [] synonym: "meristema (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "meristematic tissue (exact)" EXACT [] synonym: "分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:472 is_a: PO:0009007 ! portion of plant tissue relationship: has_part PO:0004010 ! meristematic cell [Term] id: PO:0009015 name: portion of vascular tissue namespace: plant_anatomy def: "A portion of plant tissue (PO:0009007) that has as part one or more tracheary elements (PO:0000290) or sieve elements (PO:0025406)." [POC:curators] comment: Functions in conduction and support. In shoot axes (PO:0025029), vascular tissue is often found as part of a shoot axis stele (PO:0025198) or as scattered vascular bundles (PO:0005020). May include other types of tissues or cells, such as parenchyma (PO:0005421) or fiber cells (PO:0025407). subset: TraitNet synonym: "porción de tejido vascular (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "vascular system (related)" RELATED [] synonym: "vascular tissue (exact)" EXACT [] synonym: "維管束細胞の一部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: BTO:0001432 xref: PO_GIT:431 is_a: PO:0009007 ! portion of plant tissue [Term] id: PO:0009020 name: meristem L1 layer namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) that is the outermost layer of a shoot apical meristem (PO:0020148) and gives rise to a shoot system epidermis (PO:0006035)." [Gramene:Pankaj_Jaiswal, PMID:11283725, PMID:12221985, POC:Laurel_Cooper] comment: The cells of the meristem L1 layer divide in a strictly anticlinical fashion. synonym: "meristema L1 (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "tunica (related)" RELATED [] synonym: "分裂組織 L1 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:150 xref: PO_GIT:576 is_a: PO:0009013 ! portion of meristem tissue relationship: part_of PO:0020148 ! shoot apical meristem [Term] id: PO:0009025 name: vascular leaf namespace: plant_anatomy def: "A leaf (PO:0025034) in a vascular plant." [POC:curators] comment: Has vascular tissue. From APweb Glossary: In angiosperms, commonly thought of as one of the three basic parts of the seed plant body, a structure usually of determinate growth, without secondary thickening, and of superficial origin, often flattened and photosynthetic in part, and in the axil of which is found a bud. Occurs in the sporophytic phase of a plant life cycle. subset: Angiosperm subset: Arabidopsis subset: Citrus subset: Gymnosperms subset: Maize subset: Musa subset: Potato subset: Pteridophytes subset: reference subset: Rice subset: Tomato subset: TraitNet synonym: "ascidia (narrow)" NARROW [FNA:06544712-db97-4208-b188-c4b756a53c72] synonym: "ascidium (narrow)" NARROW [FNA:a97f1513-7684-49d4-92f5-934d1c8b3e1c] synonym: "crozier (related)" RELATED [FNA:87e7efa9-89d7-4249-be74-bc22a0466a05] synonym: "fiddlehead (narrow)" NARROW [FNA:d894ba18-4523-484c-abab-26d1cac75bc4] synonym: "foliage leaf (exact)" EXACT [] synonym: "frond (narrow)" NARROW [] synonym: "hoja vascular (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "leaf, vascular (exact)" EXACT [] synonym: "macrophyll (related)" RELATED [FNA:c1142d9b-c42a-45e1-93ac-9cbe9575321e] synonym: "megaphyll (related)" RELATED [FNA:c26c826a-30d6-494e-a2f1-05540465c9fc] synonym: "needle-like leaf (narrow)" NARROW [] synonym: "pitcher (narrow)" NARROW [FNA:30d8bef3-ad1a-44ed-a995-24c3e342aefd] synonym: "pitcher blade (narrow)" NARROW [FNA:d3928bf3-1d8a-4fe5-a728-95c13c3a0f90] synonym: "pitcher-blade (narrow)" NARROW [FNA:30c47c20-f459-4518-8657-feed7eb92fe4] synonym: "scale-like leaf (narrow)" NARROW [] synonym: "sterile frond (narrow)" NARROW [FNA:a4dc40f4-92f9-4ba5-b616-a84564f63fed] synonym: "trophophyll (narrow)" NARROW [FNA:8654d268-1e4c-4edf-b937-82a965b4edef] synonym: "vascular leaves (exact, plural)" EXACT [FNA:c7d9d167-4121-43b0-b2fe-bb1ae9d6d3a6] synonym: "維管束のある葉, または維管束植物の葉 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:06544712-db97-4208-b188-c4b756a53c72 xref: FNA:30c47c20-f459-4518-8657-feed7eb92fe4 xref: FNA:30d8bef3-ad1a-44ed-a995-24c3e342aefd xref: FNA:8654d268-1e4c-4edf-b937-82a965b4edef xref: FNA:87e7efa9-89d7-4249-be74-bc22a0466a05 xref: FNA:a4dc40f4-92f9-4ba5-b616-a84564f63fed xref: FNA:a97f1513-7684-49d4-92f5-934d1c8b3e1c xref: FNA:c1142d9b-c42a-45e1-93ac-9cbe9575321e xref: FNA:c26c826a-30d6-494e-a2f1-05540465c9fc xref: FNA:d3928bf3-1d8a-4fe5-a728-95c13c3a0f90 xref: FNA:d894ba18-4523-484c-abab-26d1cac75bc4 xref: PO_GIT:137 is_a: PO:0025034 ! leaf relationship: develops_from PO:0000017 ! vascular leaf primordium relationship: participates_in PO:0028002 ! sporophyte development stage [Term] id: PO:0009026 name: sporophyll namespace: plant_anatomy def: "A leaf-like organ on which one or more sporangia are borne." [APweb:Glossary] subset: reference subset: TraitNet synonym: "esporofilo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "spore leaf (exact)" EXACT [FNA:301289d5-912b-4db3-af05-73579ecb9ef0] synonym: "胞子葉 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0006001 ! phyllome [Term] id: PO:0009027 name: megasporophyll namespace: plant_anatomy def: "A structure upon which (or in the axil of which) one or more megasporangia are borne; in flowering plants, a carpel." [APweb:Glossary] subset: TraitNet synonym: "cone scale (narrow)" NARROW [FNA:ae5076ce-3553-419a-af95-07c2062ad4e0] synonym: "macrosporophyll (related)" RELATED [FNA:c54df958-9c56-49e7-8ed8-64e36c9f42ed] synonym: "megasporofilo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "ovuliferous scale (narrow)" NARROW [FNA:8e8e55b5-2c05-4089-b43c-3bcf5692c2a2] synonym: "大胞子葉 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:8e8e55b5-2c05-4089-b43c-3bcf5692c2a2 xref: FNA:ae5076ce-3553-419a-af95-07c2062ad4e0 xref: FNA:c54df958-9c56-49e7-8ed8-64e36c9f42ed is_a: PO:0009026 ! sporophyll [Term] id: PO:0009028 name: microsporophyll namespace: plant_anatomy def: "A structure on which one or more microsporangia are borne; in flowering plants, the stamen." [APweb:Glossary] subset: TraitNet synonym: "microsporofilo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "小胞子葉 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009026 ! sporophyll [Term] id: PO:0009029 name: stamen namespace: plant_anatomy alt_id: PO:0006441 alt_id: PO:0006472 def: "A microsporophyll bearing one or more microsporangia." [APweb:Glossary] comment: Part of tassel floret. subset: reference subset: TraitNet synonym: "estambre (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "Poaceae stamen (narrow)" NARROW [] synonym: "Zea stamen (narrow)" NARROW [] synonym: "雄蕊 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009028 ! microsporophyll is_a: PO:0025395 ! floral organ relationship: develops_from PO:0004705 ! stamen primordium relationship: part_of PO:0009061 ! androecium [Term] id: PO:0009030 name: carpel namespace: plant_anatomy alt_id: PO:0006455 alt_id: PO:0006470 def: "A megasporophyll, almost always at the center of a flower, its margins more or less fused together or with other carpels to enclose the ovule(s)." [APweb:Glossary] comment: In some cases, a gynoecium (PO:0009062) may consist of only one carpel, in which case annotations should go on carpel (PO:0009030). The word pistil is used synonymously with gynoecium, but if a gynoecium consists of a single carpel, then pistil may be used synonymously with carpel. If carpels are fused, the gynoecium is a syncarpous gynoecium, as in Poaceae, Brassicaceae and Solanaceae. If carpels are free, the gynoecium is an apocarpous gynoecium, as in Fabaceae. If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), ear floret (PO:0006354), upper floret of pedicellate spikelet of ear (PO:0006350), upper floret of sessile spikelet of ear (PO:0006352), tassel floret (PO:0006310), upper floret of pedicellate spikelet of tassel (PO:0006314), upper floret of sessile spikelet of tassel (PO:0006316). subset: reference subset: TraitNet synonym: "carpelo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "pistil (broad)" BROAD [] synonym: "Poaceae carpel (narrow)" NARROW [] synonym: "Zea carpel (narrow)" NARROW [] synonym: "心皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:470 is_a: PO:0009027 ! megasporophyll is_a: PO:0025395 ! floral organ relationship: develops_from PO:0004703 ! carpel primordium relationship: part_of PO:0009062 ! gynoecium [Term] id: PO:0009032 name: petal namespace: plant_anatomy def: "A phyllome (PO:0006001) that is part of the corolla (PO:0009059), and is usually colored (not green)." [APweb:Glossary, POC:curators] comment: In some species the petal (PO:0009032) may not be colored. subset: Angiosperm subset: reference subset: TraitNet synonym: "pétalo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花弁 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:542 is_a: PO:0006001 ! phyllome is_a: PO:0025395 ! floral organ relationship: develops_from PO:0000021 ! petal primordium relationship: part_of PO:0009059 ! corolla [Term] id: PO:0009034 name: flower bract namespace: plant_anatomy def: "A bract (PO:0009055) that subtends a perianth (PO:0009058) that is part of a flower (PO:0009046)." [POC:curators] subset: reference subset: TraitNet synonym: "bráctea floral (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "chaff (related)" RELATED [] synonym: "floral bract (exact)" EXACT [] synonym: "花苞（葉） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:84 is_a: PO:0009055 ! bract is_a: PO:0025395 ! floral organ relationship: develops_from PO:0025488 ! flower bract primordium [Term] id: PO:0009039 name: glume namespace: plant_anatomy alt_id: PO:0006026 def: "One of a pair of inflorescence bracts that is part of a spikelet and subtends the two florets." [POC:Ramona_Walls] comment: Found in Poaceae and Cyperaceae. Glumes subtend the pair of florets while a lemma or palea subtend the individual florets. subset: reference synonym: "gluma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "rudimentary glume (related)" RELATED [] synonym: "苞頴 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:382 is_a: PO:0009054 ! inflorescence bract relationship: part_of PO:0009051 ! spikelet [Term] id: PO:0009046 name: flower namespace: plant_anatomy alt_id: PO:0004541 def: "A determinate reproductive shoot system (PO:0025082) that has as part at least one carpel (PO:0009030) or at least one stamen (PO:0009029) and does not contain any other determinate shoot system (PO:0009006) as a part." [POC:curators] comment: The characteristic reproductive structure of angiosperms. May have as part one or more petals, sepals or tepals. May contain one or more pistillode (PO:0009078), staminode (PO:0009077) or other aborted organs that don't show up in mature form. subset: Angiosperm subset: reference subset: TraitNet synonym: "Asteraceae floret (narrow)" NARROW [] synonym: "basal flower (narrow)" NARROW [CO_125:0000019] synonym: "double flower (narrow)" NARROW [] synonym: "flor (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "floret (related)" RELATED [] synonym: "hermaphrodite flower (narrow)" NARROW [CO_125:0000028] synonym: "monoclinous flower (narrow)" NARROW [] synonym: "perfect flower (narrow)" NARROW [] synonym: "花 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:160 xref: PO_GIT:259 is_a: PO:0025082 ! reproductive shoot system relationship: develops_from PO:0000229 ! flower meristem [Term] id: PO:0009047 name: stem namespace: plant_anatomy def: "A shoot axis (PO:0025029) that is the primary axis of a plant." [POC:curators] comment: A stem often bears leaves and buds. It is usually above ground, and is more or less negatively geotropic. subset: reference subset: TraitNet synonym: "bole (narrow)" NARROW [FNA:a5ba9e16-e0af-4430-a3a0-7aeb052fbffd] synonym: "caña (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "cane (narrow)" NARROW [] synonym: "caudex (narrow)" NARROW [FNA:cea24c10-d5ff-435f-aa40-db77dcbd27f0] synonym: "caudices (narrow)" NARROW Plural [FNA:3c0e37e8-e363-4962-847e-5f9f2906d0f8] synonym: "core (narrow)" NARROW [] synonym: "culm (exact)" EXACT [] synonym: "eje primario (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "primary axis (exact)" EXACT [] synonym: "primary stem (exact)" EXACT [FNA:e3b142f6-37cf-4c1f-be07-b64a90feb131] synonym: "primocane (narrow)" NARROW [FNA:58fb080c-dd6b-4172-b564-737091c72980] synonym: "scape (narrow)" NARROW [FNA:201dbd71-51cd-4138-8f61-3c3fdd55d02d] synonym: "stalk (narrow)" NARROW [] synonym: "tallo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "tronco (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "trunk (narrow)" NARROW [] synonym: "茎 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:201dbd71-51cd-4138-8f61-3c3fdd55d02d xref: FNA:3c0e37e8-e363-4962-847e-5f9f2906d0f8 xref: FNA:58fb080c-dd6b-4172-b564-737091c72980 xref: FNA:a5ba9e16-e0af-4430-a3a0-7aeb052fbffd xref: FNA:cea24c10-d5ff-435f-aa40-db77dcbd27f0 xref: PO_GIT:52 xref: PO_GIT:96 is_a: PO:0025029 ! shoot axis [Term] id: PO:0009049 name: inflorescence namespace: plant_anatomy alt_id: PO:0009048 alt_id: PO:0009050 alt_id: PO:0020088 alt_id: PO:0020111 alt_id: PO:0020112 alt_id: PO:0020113 alt_id: PO:0020114 alt_id: PO:0020115 alt_id: PO:0020116 alt_id: PO:0020117 alt_id: PO:0020118 alt_id: PO:0020119 alt_id: PO:0020120 def: "A reproductive shoot system (PO:0025082) that has as parts all of the shoot axes (PO:0025029) and flowers (PO:0009046; must have two or more) distal to the most distal leaf (PO:0009025)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, POC:Laurel_Cooper, POC:Ramona_Walls] comment: An inflorescence is a reproductive shoot system from which at least two flowers develop. The growth pattern of an inflorescence may be monopodial (single main shoot axis), sympodial (growth only occurs from axillary meristems), or both. An inflorescence axis (PO:0020122) can be determinate or indeterminate. An inflorescence flower pedicel (PO:0009052) is the ultimate axis in an inflorescence. The flower (PO:0009046) of many plants, for example Magnolia spp., is solitary. subset: Angiosperm subset: reference subset: TraitNet synonym: "inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "Triticeae spike (narrow)" NARROW [] synonym: "花序 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:260 xref: PO_GIT:71 is_a: PO:0025082 ! reproductive shoot system is_a: UBERON:0001062 ! anatomical entity relationship: has_part PO:0009046 ! flower relationship: participates_in PO:0001083 ! inflorescence development stage [Term] id: PO:0009051 name: spikelet namespace: plant_anatomy def: "A reproductive shoot system (PO:0025082) that is the ultimate and congested, higher order inflorescence axis (PO:0009081) of the grasses." [APweb:Glossary, PO:cooperl] comment: It consists of one to many closely-packed spikelet florets (PO:0009082) and associated glumes (PO:0009039). subset: Poaceae subset: reference synonym: "espiguilla (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "小穂 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:383 xref: PO_GIT:71 is_a: PO:0025082 ! reproductive shoot system relationship: part_of PO:0009049 ! inflorescence [Term] id: PO:0009053 name: peduncle namespace: plant_anatomy def: "A shoot axis that extends from the last foliage leaf on a stem or branch until the next distal node." [ISBN:9781842464229, POC:curators] comment: In plants with single flowers, the peduncle ends with a flower. In plants with inflorescences, the peduncle is the basal end of the primary inflorescence axis, and it ends where the inflorescence begins to branch. The peduncle marks the axial transition from vegetative to reproductive growth. In branching inflorescences, the second order inflorescence axis from the point at which it leaves the main axis up to the point at which it branches again may be called the second order peduncle. Higher order peduncles are also possible. subset: Angiosperm subset: Musa subset: reference synonym: "inflorescence stem (related)" RELATED [] synonym: "pedúnculo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花梗（総梗） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:79 is_a: PO:0025029 ! shoot axis relationship: part_of PO:0025104 ! first order inflorescence axis [Term] id: PO:0009054 name: inflorescence bract namespace: plant_anatomy alt_id: PO:0006337 def: "A bract (PO:0009055) subtending a branch of the inflorescence (PO:0009049) or borne on the inflorescence axis (PO:0020122) below any branch (PO:0025073) or flower (PO:0009046)." [APweb:Glossary] comment: Includes the leaf subtending and acting as outer envelope of an ear in Zea mays. subset: reference subset: TraitNet synonym: "bráctea de la inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "corn husk (related)" RELATED [] synonym: "husk (related)" RELATED [] synonym: "husk leaf (related)" RELATED [] synonym: "inflorescence bract of ear (narrow)" NARROW [] synonym: "pale (broad)" BROAD [FNA:3290efb9-fde1-4c56-a813-37e62e665af2] synonym: "palea (broad)" BROAD [FNA:3d210af5-1709-4aee-91e5-ccc65f5fa7bd] synonym: "paleae (broad)" BROAD Plural [FNA:28b8e135-e4b9-4419-9f14-68d68bbc80c7] synonym: "paleas (broad)" BROAD Plural [FNA:c7715818-04d2-4e9f-b63f-8741b6e558f4] synonym: "palet (broad)" BROAD [FNA:c7612a78-aff8-478d-9a6e-866dac52f101] synonym: "spathe (narrow)" NARROW [FNA:be285d91-a6e6-4e1b-8d89-fa3252201928] synonym: "squamella (narrow)" NARROW [FNA:ead20a1b-057b-4008-9466-bdb8e283aa82] synonym: "squamellae (narrow)" NARROW Plural [FNA:c5765385-917c-465e-83f8-b4fe5d693146] synonym: "squamule (narrow)" NARROW [FNA:f18da584-2b0b-4b03-a614-40140a1cb89e] synonym: "花序苞 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:28b8e135-e4b9-4419-9f14-68d68bbc80c7 xref: FNA:3290efb9-fde1-4c56-a813-37e62e665af2 xref: FNA:3d210af5-1709-4aee-91e5-ccc65f5fa7bd xref: FNA:be285d91-a6e6-4e1b-8d89-fa3252201928 xref: FNA:c5765385-917c-465e-83f8-b4fe5d693146 xref: FNA:c7612a78-aff8-478d-9a6e-866dac52f101 xref: FNA:c7715818-04d2-4e9f-b63f-8741b6e558f4 xref: FNA:ead20a1b-057b-4008-9466-bdb8e283aa82 xref: FNA:f18da584-2b0b-4b03-a614-40140a1cb89e xref: PO_GIT:84 is_a: PO:0009055 ! bract relationship: develops_from PO:0025489 ! inflorescence bract primordium relationship: part_of PO:0009049 ! inflorescence [Term] id: PO:0009055 name: bract namespace: plant_anatomy def: "A phyllome that subtends a reproductive structure." [POC:curators] comment: Usually different from leaves. Often used to refer to a floral bract, but includes other kinds of bracts. subset: reference subset: TraitNet synonym: "bráctea (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "bracteole (related)" RELATED [FNA:9cce93dc-f233-440e-9163-97207fca71a4] synonym: "bractlet (related)" RELATED [FNA:8968da77-e6b0-4302-baf9-1c8cb72a8b06] synonym: "hypsophyll (related)" RELATED [] synonym: "scale (narrow)" NARROW [FNA:8c618dea-f3dd-434f-bb13-23273ea6c143] synonym: "苞葉 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:8968da77-e6b0-4302-baf9-1c8cb72a8b06 xref: FNA:8c618dea-f3dd-434f-bb13-23273ea6c143 xref: FNA:9cce93dc-f233-440e-9163-97207fca71a4 xref: PO_GIT:217 is_a: PO:0006001 ! phyllome relationship: develops_from PO:0025487 ! bract primordium [Term] id: PO:0009058 name: perianth namespace: plant_anatomy def: "A collective phyllome structure (PO:0025023) that includes as parts the corolla (PO:0009059) and/or the calyx (PO:0009060); or one or more tepals (PO:0009033)." [POC:curators, POC:Laurel_Cooper] comment: The perianth can consist of only the corolla (PO:0009059), only the calyx (PO:0009060) or it may have both structures in a complete flower. If the petals (PO:0009032) and sepals (PO:0009031) are indistinguishable from one another, the perianth consists of just a collective tepal structure (PO:0025021), composed of one or more tepals (PO:0009033), for example in tulip or lily flowers. subset: reference subset: TraitNet synonym: "adnate perianth (narrow)" NARROW [] synonym: "calyptra perianth (narrow)" NARROW [] synonym: "connate perianth (related)" RELATED [] synonym: "perianto (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花蓋、花被 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:71 xref: PO_GIT:98 is_a: PO:0025023 ! collective phyllome structure relationship: part_of PO:0009046 ! flower [Term] id: PO:0009059 name: corolla namespace: plant_anatomy def: "A collective phyllome structure (PO:0025023) that is composed of one or more petals (PO:0009032), comprising the inner whorl of non-reproductive floral organs (PO:0025395) and surrounds the androecium (PO:0009061) and the gynoecium (PO:0009062)." [POC:curators, POC:Laurel_Cooper] comment: The corolla (PO:0009059) is part of the perianth (PO:0009058). This definition is based on the complete flower, which has all four whorls. In many species, and in mutants one or more of the whorls may be missing. The corolla (PO:0009059) often functions to attract pollinators. subset: reference subset: TraitNet synonym: "corola (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "corollae (exact, plural)" EXACT [FNA:c458334a-b696-4a0a-a321-1b61117882f6] synonym: "corollas (exact, plural)" EXACT [FNA:791b8f53-16ba-448b-9a16-9ab841d947a9] synonym: "花冠 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:541 xref: PO_GIT:71 xref: PO_GIT:98 is_a: PO:0025023 ! collective phyllome structure relationship: part_of PO:0009058 ! perianth [Term] id: PO:0009060 name: calyx namespace: plant_anatomy def: "A collective phyllome structure (PO:0025023) that is composed of one or more sepals (PO:0009031), and comprises the outer whorl of non-reproductive floral organs (PO:0025395)." [POC:curators, POC:Laurel_Cooper] comment: The calyx is part of the perianth (PO:0009058). This definition is based on the perfect flower, which has all four whorls. In many species, and in mutants one or more of the whorls are missing. subset: reference subset: TraitNet synonym: "cálix (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "calyces (exact, plural)" EXACT [FNA:f250c45e-8348-4db4-aa9a-10dfa08bfd00] synonym: "がく (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:543 xref: PO_GIT:71 xref: PO_GIT:98 is_a: PO:0025023 ! collective phyllome structure relationship: part_of PO:0009058 ! perianth [Term] id: PO:0009061 name: androecium namespace: plant_anatomy alt_id: PO:0006355 alt_id: PO:0006366 alt_id: PO:0006383 alt_id: PO:0006392 alt_id: PO:0006393 alt_id: PO:0006405 alt_id: PO:0006406 alt_id: PO:0006419 alt_id: PO:0006420 alt_id: PO:0006421 alt_id: PO:0006422 alt_id: PO:0006471 def: "A collective phyllome structure (PO:0025023) composed all of the stamens (PO:0009029) in a flower (PO:0009046)." [POC:curators] comment: The androecium also has as parts any staminodes (PO:0009077) that may be present in a flower. If annotating gene expression to an androecium with a single stamen (PO:0009029), the annotation should go on stamen. If you are annotating to this structure for Zea mays, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), ear floret (PO:0006354), lower floret of pedicellate spikelet of ear (PO:0006353), lower floret of sessile spikelet of ear (PO:0006351), upper floret of pedicellate spikelet of ear (PO:0006350), upper floret of sessile spikelet of ear (PO:0006352), tassel floret (PO:0006310), lower floret of pedicellate spikelet of tassel (PO:0006313), lower floret of sessile spikelet of tassel (PO:0006315), upper floret of pedicellate spikelet of tassel (PO:0006314), upper floret of sessile spikelet of tassel (PO:0006316). The development of an androecium in an ear floret of a normal maize plant is aborted and is present in a rudimentary state, while the development of an androecium in a tassel floret leads to a functional androecium. subset: Maize subset: Poaceae subset: reference subset: TraitNet synonym: "androecia (exact, plural)" EXACT [FNA:522936d3-a948-44f3-b9dc-634e0d190f6f] synonym: "androecio (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "androecium column (narrow)" NARROW [FNA:e0f4d402-3489-4a58-81bf-0fa5119a4db5] synonym: "androecium of ear floret (narrow)" NARROW [] synonym: "androecium of lower floret of pedicellate spikelet of ear (narrow)" NARROW [] synonym: "androecium of lower floret of sessile spikelet of ear (narrow)" NARROW [] synonym: "androecium of lower floret of sessile spikelet of tassel (narrow)" NARROW [] synonym: "androecium of tassel floret (exact)" EXACT [] synonym: "androecium of upper floret of pedicellate spikelet of ear (narrow)" NARROW [] synonym: "androecium of upper floret of pedicellate spikelet of tassel (exact)" EXACT [] synonym: "androecium of upper floret of sessile spikelet of ear (narrow)" NARROW [] synonym: "androecium of upper floret of sessile spikelet of tassel (narrow)" NARROW [] synonym: "Poaceae androecium (narrow)" NARROW [] synonym: "Zea androecium (narrow)" NARROW [] synonym: "雄蕊群 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:e0f4d402-3489-4a58-81bf-0fa5119a4db5 xref: PO_GIT:71 xref: PO_GIT:98 is_a: PO:0025023 ! collective phyllome structure relationship: develops_from PO:0025478 ! androecium primordium relationship: part_of PO:0009046 ! flower [Term] id: PO:0009062 name: gynoecium namespace: plant_anatomy alt_id: PO:0006317 alt_id: PO:0006357 alt_id: PO:0006365 alt_id: PO:0006384 alt_id: PO:0006391 alt_id: PO:0006394 alt_id: PO:0006403 alt_id: PO:0006404 alt_id: PO:0006423 alt_id: PO:0006424 alt_id: PO:0006425 alt_id: PO:0006426 alt_id: PO:0025089 def: "A collective phyllome structure (PO:0025023) composed all of the carpels (PO:0009030) in a flower (PO:0009046)." [POC:curators] comment: If annotating gene expression to a gynoecium with a single carpel (PO:0009030), the annotation should go on carpel. A gynoecium with two or more carpels may be either syncarpous (carpels fused) or apopcarpous (carpels free) or the carpels may be partially fused. The word pistil is used synonymously with gynoecium for a synocarpous gynoecium, and synonymously with carpel for an apocarpous gynoecium, whether it has one or more carpels. In Zea mays, gynoecia of tassel florets and of the lower florets of ear spikelets usually do not develop fully, and they are present in a rudimentary state. If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), ear floret (PO:0006354), lower floret of pedicellate spikelet of ear (PO:0006353), lower floret of sessile spikelet of ear (PO:0006351), upper floret of pedicellate spikelet of ear (PO:0006350), upper floret of sessile spikelet of ear (PO:0006352), tassel floret (PO:0006310), lower floret of pedicellate spikelet of tassel (PO:0006313), lower floret of sessile spikelet of tassel (PO:0006315), upper floret of pedicellate spikelet of tassel (PO:0006314), upper floret of sessile spikelet of tassel (PO:0006316). subset: reference subset: TraitNet synonym: "apocarpous gynoecium (narrow)" NARROW [] synonym: "ginoecio (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "gynaecium (exact)" EXACT [FNA:03f034c5-6bd6-4846-8ef7-c5190d09008c] synonym: "gynoecia (exact, plural)" EXACT [FNA:226a743c-7988-4b66-b163-2ce80d7c8a70] synonym: "gynoecium of ear floret (narrow)" NARROW [] synonym: "gynoecium of lower floret of pedicellate spikelet of ear (narrow)" NARROW [] synonym: "gynoecium of lower floret of pedicellate spikelet of tassel (narrow)" NARROW [] synonym: "gynoecium of lower floret of sessile spikelet of ear (narrow)" NARROW [] synonym: "gynoecium of lower floret of sessile spikelet of tassel (narrow)" NARROW [] synonym: "gynoecium of tassel floret (narrow)" NARROW [] synonym: "gynoecium of upper floret of pedicellate spikelet of ear (narrow)" NARROW [] synonym: "gynoecium of upper floret of pedicellate spikelet of tassel (narrow)" NARROW [] synonym: "gynoecium of upper floret of sessile spikelet of ear (narrow)" NARROW [] synonym: "gynoecium of upper floret of sessile spikelet of tassel (narrow)" NARROW [] synonym: "pistil (broad)" BROAD [] synonym: "Poaceae gynoecium (narrow)" NARROW [] synonym: "syncarpous gynoecium (narrow)" NARROW [] synonym: "Zea gynoecium (narrow)" NARROW [] synonym: "雌蕊群 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:470 xref: PO_GIT:71 xref: PO_GIT:98 is_a: PO:0025023 ! collective phyllome structure relationship: develops_from PO:0000019 ! gynoecium primordium relationship: part_of PO:0009046 ! flower [Term] id: PO:0009066 name: anther namespace: plant_anatomy alt_id: PO:0006442 alt_id: PO:0006473 def: "A collective plant organ structure (PO:0025007) that is the pollen-bearing part of a stamen (PO:0009029)." [APweb:Glossary] comment: Generally consists of four pollen sacs (microsporangia) in two anther thecas. If you are annotating to anther or one of its parts for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), tassel floret (PO:0006310), lower floret of pedicellate spikelet of tassel (PO:0006313), lower floret of sessile spikelet of tassel (PO:0006315), upper floret of pedicellate spikelet of tassel (PO:0006314), upper floret of sessile spikelet of tassel (PO:0006316). subset: reference subset: TraitNet synonym: "antera (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "Poaceae anther (narrow)" NARROW [] synonym: "Zea anther (narrow)" NARROW [] synonym: "半葯,花粉のう (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:297 xref: PO_GIT:70 is_a: PO:0025007 ! collective plant organ structure relationship: develops_from PO:0006089 ! anther primordium relationship: has_part PO:0025277 ! pollen sac relationship: part_of PO:0009029 ! stamen [Term] id: PO:0009073 name: stigma namespace: plant_anatomy alt_id: PO:0006468 alt_id: PO:0006487 def: "A cardinal organ part (PO:0025001), usually apical, that is part of a carpel (PO:0009030) or group of fused carpels on which the pollen (PO:0025281) germinates." [APweb:Glossary, POC:Laurel_Cooper, TAIR_curator:Leonore_Reiser] comment: If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), ear floret (PO:0006354), upper floret of pedicellate spikelet of ear (PO:0006350), upper floret of sessile spikelet of ear (PO:0006352). subset: reference subset: TraitNet synonym: "estigma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "Poaceae stigma (narrow)" NARROW [] synonym: "stigmas (exact, plural)" EXACT [FNA:21acc3ff-0dee-41c7-965c-88bdd48af2c1] synonym: "stigmata (exact, plural)" EXACT [FNA:e8a6ec07-521d-44e9-98da-cb0f18aa96a2] synonym: "Zea stigma (narrow)" NARROW [] synonym: "柱頭 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:70 is_a: PO:0025001 ! cardinal organ part relationship: part_of PO:0009030 ! carpel [Term] id: PO:0009088 name: seed coat namespace: plant_anatomy def: "A portion of plant tissue that is the covering of a seed derived from ovular - mainly integumentary - tissue." [APweb:Glossary, Gramene:Pankaj_Jaiswal, TAIR_curator:Leonore_Reiser] comment: Used only when not specified more precisely; see testa, tegmen. subset: TraitNet synonym: "cubierta de la semilla (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "portion of seed coat tissue (exact)" EXACT [] synonym: "種子種皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:149 is_a: PO:0009007 ! portion of plant tissue relationship: part_of PO:0009010 ! seed [Term] id: PO:0020003 name: plant ovule namespace: plant_anatomy alt_id: PO:0006457 alt_id: PO:0006491 def: "A plant organ (PO:0009008) that has as parts a nucellus (PO:0020020) in which a female gametophyte (PO:0025279) is located, one or two integuments (PO:0020021), and a funicle (PO:0020006)." [POC:curators] comment: A seed (PO:0009010) develops from a plant ovule. In angiosperms, a plant ovule is part of a plant ovary (PO:0009072). In conifers, a plant ovule is part of an ovuliferous scale (add term). If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), ear floret (PO:0006354), upper floret of pedicellate spikelet of ear (PO:0006350), upper floret of sessile spikelet of ear (PO:0006352). subset: reference subset: TraitNet synonym: "óvulo vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "Poaceae ovule (narrow)" NARROW [] synonym: "Zea ovule (narrow)" NARROW [] synonym: "胚珠 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:464 xref: PO_GIT:70 is_a: PO:0009008 ! plant organ relationship: develops_from PO:0000018 ! ovule primordium [Term] id: PO:0020038 name: petiole namespace: plant_anatomy def: "A stalk (PO:0025066) of a vascular leaf (PO:0009025)." [APweb:Glossary, Gramene:Pankaj_Jaiswal] subset: TraitNet synonym: "pecíolo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "葉柄 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025066 ! stalk relationship: part_of PO:0009025 ! vascular leaf [Term] id: PO:0020057 name: testa namespace: plant_anatomy def: "That part of the seed coat that develops from the outer integument, or from the single integument when there is only one." [APweb:Glossary, ISBN:0080374913] synonym: "portion of testa tissue (exact)" EXACT [] synonym: "testa (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "testae (exact, plural)" EXACT [FNA:271264d4-e973-4a84-8b5e-7744c5bc9514] synonym: "外種皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009007 ! portion of plant tissue relationship: part_of PO:0009088 ! seed coat [Term] id: PO:0020100 name: hypocotyl namespace: plant_anatomy def: "A stem internode (PO:0020142) below the cotyledonary node (PO:0025321) and transitional to a root (PO:0009005) of a plant embryo (PO:0009009) or a seedling (PO:0000003)." [APweb:Glossary, POC:curators] synonym: "hipocótile (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "胚軸 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:341 xref: PO_GIT:70 is_a: PO:0020142 ! stem internode [Term] id: PO:0020122 name: inflorescence axis namespace: plant_anatomy def: "A shoot axis (PO:0025029) that is part of an inflorescence (PO:0009049)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, PO:Laurel_Cooper, POC:curators] comment: An inflorescence axis (PO:0020122) has either a determinate apex, which terminates in a flower meristem (PO:0000229), or has an indeterminate apex, which terminates in an inflorescence apical meristem (PO:0009108). An inflorescence pedicel (PO:0009052) is the simplest example of a determinate inflorescence axis. subset: Angiosperm subset: TraitNet synonym: "eje de la inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "first order inflorescence branch (related)" RELATED [] synonym: "inflorescence rachis (related)" RELATED [] synonym: "花序軸 (Japanese, related)" RELATED [NIG:Yukiko_Yamazaki] xref: PO_GIT:260 xref: PO_GIT:667 is_a: PO:0025029 ! shoot axis relationship: part_of PO:0009049 ! inflorescence [Term] id: PO:0020136 name: ear inflorescence namespace: plant_anatomy def: "A pistillate inflorescence (PO:0025598) in Zea species that is highly compacted and bears the ear spikelets (PO:0006320) on a lateral inflorescence axis (PO:0020122)." [MaizeGDB_curator:Leszek_Vincent, POC:Laurel_Cooper] subset: Maize subset: reference synonym: "ear (related)" RELATED [] synonym: "oreja de la inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "雌穂（花） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:536 is_a: PO:0025598 ! pistillate inflorescence [Term] id: PO:0020142 name: stem internode namespace: plant_anatomy def: "A shoot axis internode (PO:0005005) that is part of a stem (PO:0009047)." [POC:curators, POC:Laurel_Cooper] comment: See node. synonym: "internodo del tallo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "茎節間 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:146 is_a: PO:0005005 ! shoot axis internode relationship: part_of PO:0009047 ! stem [Term] id: PO:0020144 name: apical meristem namespace: plant_anatomy def: "A maximal portion of meristem tissue (PO:0009013) located at a shoot apex (PO:0000037) or root tip (PO:0000025)." [Gramene:Pankaj_Jaiswal, POC:curators, POC:Laurel_Cooper] subset: TraitNet synonym: "AM (exact)" EXACT [] synonym: "meristema apical (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "primary meristem (related)" RELATED [] synonym: "promeristem (broad)" BROAD [] synonym: "頂端分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:579 is_a: PO:0009013 ! portion of meristem tissue relationship: has_part PO:0006210 ! protoderm [Term] id: PO:0020145 name: lateral meristem namespace: plant_anatomy def: "A portion of meristem (PO:0009013) tissue located parallel to the sides of a shoot axis (PO:0025029) or root (PO:0009005) that participates in lateral growth." [ISBN:047125208] comment: A term for lateral growth has been requested in GO. Lateral meristems contribute to an increase in the cross-sectional area of a shoot axis or root. Examples of lateral meristems are: cambium (PO:0005597) (includes cork cambium (PO:0005599) and vascular cambium (PO:0005598)), shoot lateral meristem (PO:0006344) (includes primary thickening meristem (PO:0005039)), root lateral meristem (PO:0006308), and secondary thickening meristem (PO:0025414). Contrasts with apical meristem (PO:0020144), phyllome marginal meristem (PO:0025404), or intercalary meristem (PO:0006073). subset: TraitNet synonym: "lateral growth meristem (exact)" EXACT [] synonym: "meristema lateral (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "secondary meristem (related)" RELATED [] synonym: "側 分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:437 is_a: PO:0009013 ! portion of meristem tissue relationship: part_of PO:0025004 ! plant axis [Term] id: PO:0020148 name: shoot apical meristem namespace: plant_anatomy def: "A shoot system meristem (PO:0006079) formed at the apex of the shoot axis (PO:0025029), including those originating from an axillary bud meristem (PO:0000232)." [POC:Laurel_Cooper, UMSL_curator:fz] subset: TraitNet synonym: "meristema apical del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "primary shoot meristem (related)" RELATED [] synonym: "promeristem (broad)" BROAD [] synonym: "SAM (exact)" EXACT [] synonym: "茎頂分裂組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:472 is_a: PO:0006079 ! shoot system meristem is_a: PO:0020144 ! apical meristem relationship: part_of PO:0000037 ! shoot axis apex [Term] id: PO:0025001 name: cardinal organ part namespace: plant_anatomy def: "A cardinal part of multi-tissue plant structure (PO:0025498) that is a proper part of a plant organ (PO:0009008) and includes portions of plant tissue (PO:0009007) of at least two different types." [POC:curators] comment: Cardinal refers to the fact that these are biologically meaningful and not arbitrary parts. Examples include petiole (PO:0020038), lamina (PO:0025060), and leaflet (PO:0020049). See also collective organ part structure (PO:0025269), for plant structures composed of parts of multiple organs. subset: Arabidopsis subset: TraitNet synonym: "cardinal part of plant organ (exact)" EXACT [] synonym: "parte de un órgano cardinal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "基本的な（主要な）器官部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:52 xref: PO_GIT:60 is_a: PO:0025498 ! cardinal part of multi-tissue plant structure intersection_of: PO:0025498 ! cardinal part of multi-tissue plant structure intersection_of: part_of PO:0009008 ! plant organ relationship: part_of PO:0009008 ! plant organ created_by: rwalls creation_date: 2010-02-11T01:18:24Z [Term] id: PO:0025004 name: plant axis namespace: plant_anatomy def: "An axial plant organ (PO:0009008)." [POC:curators] comment: Includes roots and shoots. subset: TraitNet synonym: "eje de la planta (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "plant axes (exact, plural)" EXACT [FNA:2355281f-ab10-4ae2-a3d8-672cace068a8] synonym: "植物軸（軸柱） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009008 ! plant organ created_by: rwalls creation_date: 2010-07-01T03:44:41Z [Term] id: PO:0025007 name: collective plant organ structure namespace: plant_anatomy def: "A collective plant structure (PO:0025497) that is a proper part of a whole plant (PO:0000003), and is composed of two or more adjacent plant organs (PO:0009008) and the associated portions of plant tissue (PO:0009007)." [POC:curators] comment: Organs can be of the same type or different types. Examples include flower (PO:0009046), perianth (PO:0009058), and inflorescence (PO:0009049). See also collective organ part structure (PO:0025269), for plant structures composed of parts of multiple organs, but no complete plant organs. This was formerly named collective plant structure. subset: TraitNet synonym: "estructura vegetal colectiva de órgano (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "集合植物器官構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:63 is_a: PO:0025497 ! collective plant structure relationship: has_part PO:0009008 ! plant organ created_by: rwalls creation_date: 2010-02-09T04:12:11Z [Term] id: PO:0025022 name: collective leaf structure namespace: plant_anatomy def: "A collective phyllome structure (PO:0025023) composed of two or more leaves (PO:0025034)." [POC:curators] comment: This term replaces the obsolete term leaf whorl (PO:0008034). If you are looking for annotations for PO:0008034, please use this term instead. synonym: "cycle (broad)" BROAD [FNA:d42df0a9-60f4-4c24-9c0b-ba815272f2fe] synonym: "estructura colectiva de hoja (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "leaf series (exact)" EXACT [FNA:5060eda6-41fb-4c20-9bc6-79c449da97b2] synonym: "leaf whorl (narrow)" NARROW [] synonym: "rosette (narrow)" NARROW [] synonym: "verticil (broad)" BROAD [FNA:12607624-3d2a-4113-bd86-0e2557f2f473] synonym: "葉が集まった構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:12607624-3d2a-4113-bd86-0e2557f2f473 xref: FNA:d42df0a9-60f4-4c24-9c0b-ba815272f2fe xref: PO_GIT:98 is_a: PO:0025023 ! collective phyllome structure created_by: rwalls creation_date: 2010-04-21T12:29:35Z [Term] id: PO:0025023 name: collective phyllome structure namespace: plant_anatomy alt_id: PO:0008033 def: "A collective plant organ structure (PO:0025007) that consists of two or more phyllomes (PO:0006001) originating from the same node or from one or more adjacent nodes with compressed shoot internodes (PO:0005005)." [POC:curators] subset: TraitNet synonym: "cycle (broad)" BROAD [FNA:d42df0a9-60f4-4c24-9c0b-ba815272f2fe] synonym: "estructura colectiva del filoma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "floral whorl (narrow)" NARROW [GO:0048438, GO:0048457, GO:0048458, GO:0048459] synonym: "phyllome whorl (related)" RELATED [] synonym: "verticil (broad)" BROAD [FNA:12607624-3d2a-4113-bd86-0e2557f2f473] synonym: "whorl (narrow)" NARROW [] synonym: "葉的器官が集まった構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:12607624-3d2a-4113-bd86-0e2557f2f473 xref: FNA:d42df0a9-60f4-4c24-9c0b-ba815272f2fe xref: GO:0048438 xref: GO:0048457 xref: GO:0048458 xref: GO:0048459 xref: PO_GIT:90 xref: PO_GIT:99 is_a: PO:0025007 ! collective plant organ structure created_by: Laurel_Cooper creation_date: 2010-04-28T11:04:34Z [Term] id: PO:0025025 name: root system namespace: plant_anatomy def: "A collective plant organ structure (PO:0025007) that produces root meristems (PO:0006085), the plant structures (PO:0009011) that arise from them and the parts thereof." [POC:curators, POC:Laurel_Cooper] comment: Generally the below ground portion of a vascular plant. subset: TraitNet synonym: "root (broad)" BROAD [FNA:b7ce680b-c6ed-4d2e-81e6-66970f7deff9] synonym: "sistema de raíz (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "根系 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:b7ce680b-c6ed-4d2e-81e6-66970f7deff9 xref: PO_GIT:136 is_a: PO:0025007 ! collective plant organ structure relationship: participates_in PO:0028002 ! sporophyte development stage created_by: rwalls creation_date: 2010-07-01T02:11:26Z [Term] id: PO:0025028 name: embryo plant cell namespace: plant_anatomy def: "A native plant cell (PO:0025606) that is part of a plant embryo (PO:0009009)." [POC:curators, POC:Laurel_Cooper] synonym: "célula embriónica vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "embryo cell (broad)" BROAD [] synonym: "embryonic cell (broad)" BROAD [] synonym: "embryonic plant cell (exact)" EXACT [] synonym: "胚性植物細胞 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:281 is_a: PO:0025099 ! embryo plant structure is_a: PO:0025606 ! native plant cell intersection_of: PO:0025606 ! native plant cell intersection_of: part_of PO:0009009 ! plant embryo created_by: rwalls creation_date: 2010-05-07T02:41:17Z [Term] id: PO:0025029 name: shoot axis namespace: plant_anatomy def: "A plant axis (PO:0025004) that is part of a shoot system (PO:0009006)." [POC:curators] comment: Often bears leaves and branches. In vascular plants, has at least one node and one internode. subset: Angiosperm subset: Arabidopsis subset: Maize subset: Poaceae subset: Rice subset: TraitNet synonym: "caullome (exact)" EXACT [] synonym: "eje del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "shoot (related)" RELATED [] synonym: "シュート軸 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025004 ! plant axis relationship: part_of PO:0009006 ! shoot system created_by: rwalls creation_date: 2010-07-01T03:46:35Z [Term] id: PO:0025034 name: leaf namespace: plant_anatomy def: "A phyllome (PO:0006001) that is not associated with a reproductive structure." [POC:curators] subset: TraitNet synonym: "hoja (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "葉 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:274 xref: PO_GIT:301 is_a: PO:0006001 ! phyllome created_by: rwalls creation_date: 2010-07-12T01:31:44Z [Term] id: PO:0025040 name: shoot axis tuber axillary vegetative bud namespace: plant_anatomy def: "An axillary vegetative bud (PO:0004712) that is part of a shoot axis tuber (PO:0004543)." [POC:curators] synonym: "tuber bud (exact)" EXACT [] synonym: "tuber eye (related)" RELATED [] synonym: "yema vegetativa axilar de tubérculo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "塊茎腋栄養芽 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:102 is_a: PO:0004712 ! axillary vegetative bud relationship: part_of PO:0004543 ! shoot axis tuber created_by: rwalls creation_date: 2010-05-26T08:09:37Z [Term] id: PO:0025042 name: subterranean tuber axillary vegetative bud namespace: plant_anatomy def: "A tuber axillary vegetative bud that is part of a subterranean tuber." [POC:curators] comment: A structure on the tuber surface that can sprout. In potatoes, axillary vegetative buds (eyes) can determine processing quality. Scale that the breeders use to rate the buds/sprouts of tubers: 1. none, 2. swollen eye, 3. sprout ca. 1/4 inch, 4. sprout ca. 1/2 inch, 5. sprout ca. 1 inch, 6. sprout ca. 2 inch, 7. sprout ca. 3 inch, 8. new top growth, 9. chain tubers. subset: Potato synonym: "eye (broad)" BROAD [] synonym: "potato eye (narrow)" NARROW [] synonym: "swollen eye (narrow)" NARROW [] synonym: "tuber eye (broad)" BROAD [] synonym: "yema vegetativa axilar de tubérculo subterráneo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "地下塊茎腋栄養芽 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:102 is_a: PO:0025040 ! shoot axis tuber axillary vegetative bud relationship: part_of PO:0004547 ! subterranean shoot axis tuber created_by: rwalls creation_date: 2010-05-26T08:18:09Z [Term] id: PO:0025059 name: portion of ground tissue namespace: plant_anatomy def: "Any portion of plant tissue (PO:0009007) other than epidermis (PO:0005679) or vascular tissue (PO:0009015)." [ISBN:0471244554, ISBN:0716710072] comment: Develops from the ground meristem (PO:0025594). subset: TraitNet synonym: "fundamental tissue (exact)" EXACT [ISBN:0471244554] synonym: "porción del tejido fundamental (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "基本組織の一部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:106 is_a: PO:0009007 ! portion of plant tissue relationship: develops_from PO:0025594 ! ground meristem created_by: Laurel_Cooper creation_date: 2009-12-17T03:06:13Z [Term] id: PO:0025066 name: stalk namespace: plant_anatomy def: "A cardinal organ part (PO:0025001) that is elongated and sub-cylindrical to cylindrical and supports another cardinal organ part." [POC:curators] comment: Some stalks may be ridged or grooved. subset: TraitNet synonym: "stipe (related)" RELATED [FNA:21cee2f5-016a-44c6-b7a5-1fff6adc7e35] synonym: "tallo de alto orden (secundario, terciario, etc) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "柄 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:21cee2f5-016a-44c6-b7a5-1fff6adc7e35 xref: PATO:0001873 xref: PATO:0002226 xref: PO_GIT:52 xref: PO_GIT:78 is_a: PO:0025001 ! cardinal organ part created_by: Laurel_Cooper creation_date: 2009-12-18T10:09:17Z [Term] id: PO:0025073 name: branch namespace: plant_anatomy def: "A shoot axis (PO:00025029) that develops from an axillary bud meristem (PO:0000232) or from equal divisions of a meristematic apical cell (PO:0030007)." [POC:curators] comment: In vascular plants, branches arise from an axillary bud meristem (PO:0000232) and from divisions of the meristematic apical cell (PO:0030007) in non-vascular plants. subset: TraitNet synonym: "branchlet (narrow)" NARROW [FNA:32d32293-adee-47ae-b1ba-bd9bd22230c2] synonym: "higher order axis (narrow)" NARROW [] synonym: "ramificación (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "secondary axis (narrow)" NARROW [] synonym: "shoot axis branch (exact)" EXACT [POC:curators] synonym: "tertiary axis (narrow)" NARROW [] synonym: "twig (narrow)" NARROW [] synonym: "枝 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:32d32293-adee-47ae-b1ba-bd9bd22230c2 xref: PO_GIT:134 is_a: PO:0025029 ! shoot axis created_by: rwalls creation_date: 2010-07-01T04:21:46Z [Term] id: PO:0025082 name: reproductive shoot system namespace: plant_anatomy def: "A shoot system (PO:0009006) in the sporophytic phase that has as part at least one sporangium (PO:0025094)." [POC:curators] subset: TraitNet synonym: "sistema de brote reproductivo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "生殖シュート 系、苗条系 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0009006 ! shoot system relationship: participates_in PO:0025530 ! reproductive shoot system development stage created_by: rwalls creation_date: 2010-09-17T09:49:10Z [Term] id: PO:0025083 name: strobilus namespace: plant_anatomy def: "A reproductive shoot system (PO:0025082) consisting of a number of sporophylls (PO:0009026) or plant ovule (PO:0020003)-bearing modified leaves (PO:0025034) grouped terminally on a stem (PO:0009047)." [ISBN:0716710072, POC:curators] comment: May be simple or compound. Found in lycophytes such as Selaginella and Lycopodium, sphenophytes such as Equisetum, gymnosperms such as cycad, conifers, gnetophytes and the pollen producing structures of Gingko. The term cone is often used for strobili that are woody. Flowers are sometimes considered bisexual strobili. Some flowering plants such as Alnus have inflorescences called catkins that resemble strobili, but are not. subset: TraitNet synonym: "compound strobilus (narrow)" NARROW [] synonym: "cone (related)" RELATED [] synonym: "cono (Spanish, exact) (related)" RELATED Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "estróbilo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "simple strobilus (narrow)" NARROW [] synonym: "strobili (exact, plural)" EXACT [FNA:1fdafc26-bb42-444a-97e8-b6c0df728998] synonym: "胞子嚢穂,　球花 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:168 xref: PO_GIT:601 is_a: PO:0025082 ! reproductive shoot system created_by: rwalls creation_date: 2010-09-17T09:51:22Z [Term] id: PO:0025094 name: sporangium namespace: plant_anatomy alt_id: PO:0025232 def: "A plant organ (PO:0009008) in which plant spores (PO:0025017) are produced." [ISBN:0716710072, POC:curators] comment: In bryophytes, particularly in mosses, a sporangium is referred to as a capsule. In seed plants, a sporangium is located in a sporophyll. In pteridophytes, a sporangium is located on the surface of a sporophyll or fertile leaf or borne on a sporangiophore. May be unicellular in some algae. subset: Bryophytes subset: TraitNet synonym: "esporangio (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "moss capsule (exact)" EXACT [] synonym: "sporangia (exact, plural)" EXACT [] synonym: "spore capsule (exact)" EXACT [] synonym: "spore case (exact)" EXACT [FNA:808e89e2-7155-41e5-b7b9-a887000d1734] synonym: "胞子嚢 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:251 xref: PO_GIT:257 is_a: PO:0009008 ! plant organ relationship: participates_in PO:0028002 ! sporophyte development stage created_by: rwalls creation_date: 2010-10-27T11:28:21Z [Term] id: PO:0025096 name: carpel epidermis namespace: plant_anatomy def: "A portion of phyllome epidermis (PO:0025157) that is part of a carpel (PO:0009030)." [POC:Ramona_Walls] synonym: "A portion of carpel epidermis (PO:0025096) that covers the abaxial surface of a carpel (PO:0009030). (broad)" BROAD [] synonym: "epidermis del carpelo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "心皮 表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025157 ! phyllome epidermis intersection_of: PO:0025157 ! phyllome epidermis intersection_of: part_of PO:0009030 ! carpel relationship: part_of PO:0009030 ! carpel created_by: rwalls creation_date: 2010-12-17T12:36:46Z [Term] id: PO:0025097 name: stamen epidermis namespace: plant_anatomy def: "A portion of phyllome epidermis (PO:0025157) that is part of a stamen (PO:0009029)." [POC:Ramona_Walls] synonym: "epidermis del estambre (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "雄蕊表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025157 ! phyllome epidermis intersection_of: PO:0025157 ! phyllome epidermis intersection_of: part_of PO:0009029 ! stamen relationship: part_of PO:0009029 ! stamen created_by: rwalls creation_date: 2010-12-17T12:36:46Z [Term] id: PO:0025099 name: embryo plant structure namespace: plant_anatomy def: "A plant structure (PO:0009011) that is part of an plant embryo (PO:0009009)." [POC:curators] comment: Includes plant structures that only occur in embryos (such as suspensor) as well as plant structures that are part of an embryo when a plant is in the embryonic phase (such as embryonic radicle). synonym: "embryonic plant structure (exact)" EXACT [] synonym: "estructura vegetal embriónica (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "胚性植物構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:245 xref: PO_GIT:339 is_a: PO:0009011 ! plant structure intersection_of: PO:0009011 ! plant structure intersection_of: part_of PO:0009009 ! plant embryo relationship: part_of PO:0009009 ! plant embryo created_by: rwalls creation_date: 2010-11-05T01:36:24Z [Term] id: PO:0025104 name: first order inflorescence axis namespace: plant_anatomy def: "An inflorescence axis (PO:0020122) that is the primary or main axis of an inflorescence (PO:0009049)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, PO:Laurel_Cooper, POC:Ramona_Walls] comment: Monopodial inflorescences, such as a raceme inflorescence (PO:0030115), have a centrally-located main axis; this axis is a first order inflorescence axis. In contrast, sympodial inflorescences, such as the riphidium inflorescence (PO:0030131), do not have a centrally-located main axis. The basal-most portion of a first order inflorescence axis is referred to as a peduncle (PO:0009053). subset: Angiosperm synonym: "inflorescence rachis (exact)" EXACT [FNA:78c2e094-f6db-4d95-b8bb-3e2bdaebf764] synonym: "inflorescence rhachis (exact)" EXACT [FNA:f76f9272-ef24-4be8-a9b3-3da4c06bd8cf] synonym: "primary inflorescence axis (exact)" EXACT [] synonym: "primer orden del eje de la inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "第一花序軸 (Japanese, exact)" EXACT [NIG:Yukiko_Yamazaki] xref: PO_GIT:260 xref: PO_GIT:667 is_a: PO:0020122 ! inflorescence axis relationship: has_part PO:0009053 ! peduncle created_by: rwalls creation_date: 2011-01-05T08:41:49Z [Term] id: PO:0025127 name: primordium namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) that has as parts protoderm (PO:0006210) and sub-epidermal meristematic tissue and is committed to the development of a particular plant structure (PO:0009011)." [POC:curators] comment: A primordium appears as a protrusion and is the first distinct form of a plant organ (PO:0009008), cardinal organ part (PO:0025001), or collective plant organ structure (PO:0025007). The transition from a primordium to the plant structure it develops into is marked by the development of non-meristematic cells, although meristematic cells may be present after the transition. synonym: "portion of primordial tissue (exact)" EXACT [] synonym: "portion of primordium tissue (exact)" EXACT [] synonym: "primordia (exact, plural)" EXACT [] synonym: "primordio (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:186 is_a: PO:0009013 ! portion of meristem tissue created_by: rwalls creation_date: 2010-11-15T09:10:22Z [Term] id: PO:0025128 name: phyllome primordium namespace: plant_anatomy def: "A primordium (PO:0025127) that develops from a phyllome anlagen (PO:0025430) and is part of a shoot apex (PO:0000037) and is committed to the development of a phyllome (PO:0006001)." [PMID:11572953, POC:curators] comment: The transition from phyllome primordium to phyllome occurs when the first non-meristematic tissue develops begins to develop. synonym: "phyllome primordia (exact, plural)" EXACT [] synonym: "portion of phyllome primordium tissue (exact)" EXACT [] synonym: "primordio del filoma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "フィロム原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:466 is_a: PO:0025127 ! primordium relationship: develops_from PO:0025430 ! phyllome anlagen relationship: part_of PO:0000037 ! shoot axis apex created_by: rwalls creation_date: 2010-11-15T09:27:11Z [Term] id: PO:0025131 name: plant anatomical entity namespace: plant_anatomy def: "An anatomical entity that is or was part of a plant." [BFO:0000004, CARO:0000000, CAROC:Brownsville2014, POC:curators] comment: Includes both material entities such as plant structures and immaterial entities such as plant anatomical spaces. CARO:0000000 'anatomical entity' is defined as: A part of a cellular organism that is either an immaterial entity or a material entity with granularity aboove the level of a protein complex. Or, a substance produced by a cellular organism with granularity above the level of a protein complex. Refers to BFO:0000004 'independent continuant'. synonym: "entidad anatómica vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "植物 解剖学（形態）的実体 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:224 is_a: BFO:0000040 ! material entity relationship: only_in_taxon NCBITaxon:33090 {source="cjm"} ! Viridiplantae created_by: rwalls creation_date: 2010-11-15T11:41:38Z [Term] id: PO:0025157 name: phyllome epidermis namespace: plant_anatomy def: "A portion of shoot system epidermis (PO:0006035) that is part of a phyllome (PO:0006001)." [POC:curators, POC:Laurel_Cooper] synonym: "epidermis del filoma (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "フィロム表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0006035 ! shoot system epidermis intersection_of: PO:0006035 ! shoot system epidermis intersection_of: part_of PO:0006001 ! phyllome relationship: part_of PO:0006001 ! phyllome created_by: rwalls creation_date: 2010-11-15T02:32:53Z [Term] id: PO:0025158 name: bract epidermis namespace: plant_anatomy def: "A portion of phyllome epidermis (PO:0025157) that is part of a bract (PO:0009055)." [POC:Ramona_Walls] synonym: "epidermis de la bráctea (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "苞表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025157 ! phyllome epidermis intersection_of: PO:0025157 ! phyllome epidermis intersection_of: part_of PO:0009055 ! bract relationship: part_of PO:0009055 ! bract created_by: rwalls creation_date: 2010-11-15T02:34:14Z [Term] id: PO:0025172 name: thorn namespace: plant_anatomy def: "A branch that is a sclerified, pointed outgrowth." [POC:curators] comment: A thorn is a short, pointed (PATO:0002258) woody structure, may be branched. synonym: "barb (broad)" BROAD [FNA:ac7a59be-2920-4e24-bf9a-53d66c7cad5d] synonym: "barbel (broad)" BROAD [FNA:ea8c8671-f661-42e1-8572-6b72fa98a3b9] synonym: "barbella (broad)" BROAD [FNA:1f0e37d5-db79-4b3f-abba-eabd63380f67] synonym: "barbellae (broad)" BROAD Plural [FNA:00e30ce4-70bc-489c-86df-73030c9ece1e] synonym: "barbellula (broad)" BROAD [FNA:ca4dbc82-d782-4808-9149-3d39804d0d7f] synonym: "barbellulae (broad)" BROAD Plural [FNA:5c74e2ca-6f38-4366-9342-0908638f6939] synonym: "barbellule (broad)" BROAD [FNA:fb4ced27-a2c5-4dbf-8588-d2fc702bb02c] synonym: "espina (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "とげ（spine, prickle) (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:00e30ce4-70bc-489c-86df-73030c9ece1e xref: FNA:1f0e37d5-db79-4b3f-abba-eabd63380f67 xref: FNA:5c74e2ca-6f38-4366-9342-0908638f6939 xref: FNA:ac7a59be-2920-4e24-bf9a-53d66c7cad5d xref: FNA:ca4dbc82-d782-4808-9149-3d39804d0d7f xref: FNA:ea8c8671-f661-42e1-8572-6b72fa98a3b9 xref: FNA:fb4ced27-a2c5-4dbf-8588-d2fc702bb02c xref: PO_GIT:221 is_a: PO:0025073 ! branch created_by: rwalls creation_date: 2010-11-18T08:07:48Z [Term] id: PO:0025178 name: stem epidermis namespace: plant_anatomy def: "A portion of shoot axis epidermis (PO:0000112) that is part of a stem (PO:0009047)." [POC:Laurel_Cooper, POC:Ramona_Walls] synonym: "culm epidermis (related)" RELATED [] synonym: "epidermis del tallo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "茎表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:111 is_a: PO:0000112 ! shoot axis epidermis intersection_of: PO:0000112 ! shoot axis epidermis intersection_of: part_of PO:0009047 ! stem relationship: part_of PO:0009047 ! stem created_by: rwalls creation_date: 2010-11-22T09:56:21Z [Term] id: PO:0025179 name: branch epidermis namespace: plant_anatomy def: "A portion of shoot axis epidermis (PO:0006035) that is part of a branch (PO:0025073)." [POC:Ramona_Walls] synonym: "epidermis de la ramificación (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "枝 表皮 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0000112 ! shoot axis epidermis intersection_of: PO:0000112 ! shoot axis epidermis intersection_of: part_of PO:0025073 ! branch relationship: part_of PO:0025073 ! branch created_by: rwalls creation_date: 2010-11-22T09:58:06Z [Term] id: PO:0025197 name: stele namespace: plant_anatomy def: "A cardinal organ part (PO:0025001) that is the central column of a plant axis that consists of the primary vascular tissue and associated ground tissue." [POC:curators] comment: If a pith is present, it is part of the stele, otherwise the stele only includes the primary vascular tissue and the ground tissue that surrounds it. synonym: "estela (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "中心柱, central cylinder (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:177 is_a: PO:0025001 ! cardinal organ part relationship: part_of PO:0025004 ! plant axis created_by: rwalls creation_date: 2010-12-09T03:56:19Z [Term] id: PO:0025202 name: microsporangium namespace: plant_anatomy def: "A sporangium (PO:0025094) in which microspores (PO:0020048) are produced." [ISBN:0716710072] synonym: "macrosporangia (related)" RELATED Plural [FNA:6102371f-fcdd-47cd-b0fd-2d24e2d5c8cc] synonym: "macrosporangium (related)" RELATED [FNA:7f9e3756-4ac4-495d-8fb6-fffed355a241] synonym: "megasporangia (exact, plural)" EXACT [FNA:39beb98a-e588-4996-8a2d-57c9967dc8ab] synonym: "microsporangia (exact, plural)" EXACT [FNA:067d82bc-0218-4f34-b021-f1c3acadd136] synonym: "microsporangio (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "小胞子嚢 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:6102371f-fcdd-47cd-b0fd-2d24e2d5c8cc xref: FNA:7f9e3756-4ac4-495d-8fb6-fffed355a241 xref: PO_GIT:254 is_a: PO:0025094 ! sporangium created_by: rwalls creation_date: 2010-12-09T04:05:41Z [Term] id: PO:0025222 name: reproductive shoot apex namespace: plant_anatomy def: "A shoot apex that has as part a reproductive shoot apical meristem." [POC:Ramona_Walls] synonym: "ápice reproductivo del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "生殖シュート頂、茎頂 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0000037 ! shoot axis apex created_by: rwalls creation_date: 2010-12-20T08:47:03Z [Term] id: PO:0025223 name: vegetative shoot apex namespace: plant_anatomy def: "A shoot apex PO:0000037) that has as part a vegetative shoot apical meristem (PO:0008016)." [POC:Laurel_Cooper, POC:Ramona_Walls] synonym: "ápice vegetativo del epiblasto (epiblastema) (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "栄養シュート頂、栄養枝頂 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:234 is_a: PO:0000037 ! shoot axis apex relationship: has_part PO:0008016 ! vegetative shoot apical meristem created_by: rwalls creation_date: 2010-12-20T08:47:03Z [Term] id: PO:0025233 name: portion of embryo plant tissue namespace: plant_anatomy def: "A portion of plant tissue (PO:0009007) that is part of a plant embryo (PO:0009009)." [POC:curators] comment: This class is for tissues that only occur as part of an embryo. synonym: "portion of embryo tissue (broad)" BROAD [] synonym: "portion of embryonic plant tissue (exact)" EXACT [] synonym: "tejido embriónico vegetal (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "植物胚性組織 の一部 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:338 is_a: PO:0009007 ! portion of plant tissue is_a: PO:0025099 ! embryo plant structure intersection_of: PO:0009007 ! portion of plant tissue intersection_of: part_of PO:0009009 ! plant embryo created_by: rwalls creation_date: 2010-12-20T12:27:10Z [Term] id: PO:0025277 name: pollen sac namespace: plant_anatomy alt_id: PO:0006444 alt_id: PO:0006476 def: "A microsporangium that is part of a sporophyll and where the pollen grains develop and are located after they develop." [POC:curators] comment: A pollen sac is a microsporangium in seed plants. In angiosperms, a single, unfused pollen sac may contain an anther locule or several pollen sacs may fuse so they contain a single anther locule. If you are annotating to this structure for Zea mays or other grasses, please also add an annotation to the corresponding floret type. Choose the most specific term possible from: spikelet floret (PO:0009082), tassel floret (PO:0006310), lower floret of pedicellate spikelet of tassel (PO:0006313), lower floret of sessile spikelet of tassel (PO:0006315), upper floret of pedicellate spikelet of tassel (PO:0006314), upper floret of sessile spikelet of tassel (PO:0006316). subset: reference subset: TraitNet synonym: "anther lobe (narrow)" NARROW [] synonym: "Poaceae microsporangium (narrow)" NARROW [] synonym: "saco polínico (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "Zea microsporangium (narrow)" NARROW [] synonym: "花粉のう (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:255 xref: PO_GIT:296 is_a: PO:0025202 ! microsporangium relationship: part_of PO:0009028 ! microsporophyll created_by: rwalls creation_date: 2011-02-25T09:17:11Z [Term] id: PO:0025323 name: flower fascicle namespace: plant_anatomy def: "A reproductive shoot system (PO:0025082) that is a second order inflorescence (PO:0025240), or higher, in which the inflorescence branch (PO:0009081) bears two or more flowers (PO:0009046), but is not elongated." [PMID:12644644] comment: A fascicle appears to be a cluster of flowers in an axil of a single bract of the main inflorescence. Fascicles are common in some sections of the Fabaceae, where they are second order inflorescences. synonym: "bundle (related)" RELATED [FNA:a5e2072c-2c55-48d8-b540-6f8aa1c0b83b] synonym: "fascículo floral (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "floral fascicle (exact)" EXACT [] synonym: "花束 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:a5e2072c-2c55-48d8-b540-6f8aa1c0b83b xref: PO_GIT:267 is_a: PO:0025082 ! reproductive shoot system created_by: rwalls creation_date: 2011-07-07T10:52:27Z [Term] id: PO:0025337 name: life of whole plant stage namespace: plant_structure_development_stage def: "A maximal whole plant development stage." [POC:curators] comment: There are only two types of life of whole plant. Every life of a whole plant is either a maximal gametophyte stage or a maximal sporophyte stage. synonym: "vida de la planta entera (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "植物体の一生 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:230 is_a: PO:0007033 ! whole plant development stage created_by: rwalls creation_date: 2011-10-19T10:54:37Z [Term] id: PO:0025338 name: collective plant organ structure development stage namespace: plant_structure_development_stage def: "A plant structure development stage (PO:0009012) that has as primary participant a collective plant structure (PO:0025497)." [POC:curators] comment: Includes flower development stage (PO:0007615), corolla development stage (PO:0007604), and inflorescence development stage (PO:0001083). synonym: "etapa de desarrollo de una estructura colectiva de la planta (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "集合的植物構造の発生過程 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:391 is_a: PO:0009012 ! plant structure development stage relationship: has_participant PO:0025007 ! collective plant organ structure created_by: rwalls creation_date: 2011-10-19T11:12:49Z [Term] id: PO:0025349 name: awn namespace: plant_anatomy def: "A cardinal organ part that is a slender, more or less straight and stiff, fine-pointed, terminal or subterminal appendage of a glume, lemma, or palea." [FNA:glossary] comment: Found in a spikelet of Poaceae. Sometimes the awn is a continuation of the bearing structure's central primary vein. synonym: "arista (exact)" EXACT [FNA:399ba59a-deb1-4bc9-b7e5-ed2b89700d5c, FNA:5e6f29b2-6a37-4663-888b-7cb315ef277e] synonym: "arista (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "bristle (broad)" BROAD [FNA:78121d02-e7db-45eb-b1b7-011d5026beae] synonym: "seta (related)" RELATED [FNA:c751440c-a7b3-4997-aed8-47f8254fd05f] synonym: "setae (related)" RELATED Plural [FNA:93b95b97-0f1a-4d26-9c86-ebede4157269] synonym: "芒 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: FNA:78121d02-e7db-45eb-b1b7-011d5026beae xref: FNA:93b95b97-0f1a-4d26-9c86-ebede4157269 xref: FNA:c751440c-a7b3-4997-aed8-47f8254fd05f is_a: PO:0025001 ! cardinal organ part relationship: part_of PO:0009051 ! spikelet created_by: rwalls creation_date: 2011-11-16T11:28:36Z [Term] id: PO:0025355 name: corm namespace: plant_anatomy def: "A shoot system (PO:0009006) that has as parts a short, enlarged stem (PO:0009047) in which the shoot internodes (PO:0005005) do not elongate, and one or more buds (PO:0000055)." [ISBN:9780881928501] comment: May serve as a storage or perennating organ. Usually underground. A corm differs from a bulb (PO:0025356) in that it does not have fleshy leaves or leaf bases but usually has scale leaves or remnants of dry leaf sheaths that form a protective covering around it. May bear remnants or scars of detached leaves. Adventitious roots may develop from the base of a corm, and these may be contractile, pulling the corm into the soil. Examples include Gladiolus and Crocus. The pseudobulb of an orchid is equivalent to a corm. A corm is very similar to a rhizome (PO:0004542) with very short sympodial units, although not all corms have sympodial growth. synonym: "cormel (narrow)" NARROW [] synonym: "cormlet (narrow)" NARROW [] synonym: "cormo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "diaspore (broad)" BROAD [] synonym: "pseudobulb (narrow)" NARROW [] synonym: "球茎 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:173 is_a: PO:0009006 ! shoot system created_by: rwalls creation_date: 2011-11-16T03:39:15Z [Term] id: PO:0025356 name: bulb namespace: plant_anatomy def: "A short, enlarged shoot system (PO:0009006) that has as parts a short stem (PO:0009047) in which the shoot internodes (PO:0005005) do not elongate, and one or more buds (PO:0000055) enclosed by fleshy leaves (PO:0009025) or leaf bases (PO:0020040)." [ISBN:9780881928501] comment: May serve as a storage and/or perennating organ. Usually underground. A bulb differs from a corm (PO:0025355) by having fleshy leaves or leaf bases. The outer leaves of a bulb are often dry and membranous, rather than fleshy. May bear adventitious roots. Examples include Alium and Tulipa. Not the same structure as a bulbil. synonym: "bulblet (narrow)" NARROW [] synonym: "bulbo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "diaspore (broad)" BROAD [] synonym: "球根、鱗茎 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:173 is_a: PO:0009006 ! shoot system created_by: rwalls creation_date: 2011-11-16T03:39:15Z [Term] id: PO:0025395 name: floral organ namespace: plant_anatomy def: "A plant organ (PO:0009008) that is part of a flower (PO:0009046)." [POC:curators] comment: Includes phyllomes such as anthers and petals, as well as shoot axes such as androphores and gynophores. synonym: "órgano floral (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "flower organ (exact)" EXACT [] synonym: "花器官 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:423 is_a: PO:0009008 ! plant organ intersection_of: PO:0009008 ! plant organ intersection_of: part_of PO:0009046 ! flower relationship: part_of PO:0009046 ! flower created_by: rwalls creation_date: 2012-01-19T11:44:36Z [Term] id: PO:0025409 name: secondary vascular tissue namespace: plant_anatomy def: "A portion of vascular tissue (PO:0009015) that develops from a vascular cambium (PO:0005598)." [ISBN:0471245208] comment: Forms as part of secondary growth (GO:0080117) in vascular plants. Often differentiated into the axial system (PO:0025410) and ray system (PO:0025411). synonym: "tejido vascular secundario (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "二次維管組織 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:432 is_a: PO:0009015 ! portion of vascular tissue intersection_of: PO:0009015 ! portion of vascular tissue intersection_of: develops_from PO:0005598 ! vascular cambium relationship: develops_from PO:0005598 ! vascular cambium created_by: rwalls creation_date: 2012-02-01T10:53:46Z [Term] id: PO:0025430 name: phyllome anlagen namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) that is part of a peripheral zone (PO:0000225) of a shoot apical meristem (PO:0020148) and will give rise to a phyllome primordium (PO:0025128)." [POC:curators, POC:Laurel_Cooper] comment: The phyllome anlagen is only detectable by gene expression, not morphology. synonym: "phyllome meristem (broad)" BROAD [] synonym: "フィロム原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:427 is_a: PO:0009013 ! portion of meristem tissue relationship: part_of PO:0000225 ! peripheral zone created_by: Laurel_Cooper creation_date: 2012-02-07T08:20:10Z [Term] id: PO:0025431 name: vascular leaf anlagen namespace: plant_anatomy def: "A phyllome anlagen (PO:0025430) that will give rise to a vascular leaf primordium (PO:0000017) and is part of a peripheral zone (PO:0000225) of a shoot apical meristem (PO:0020148)." [PMID:14732442, POC:Laurel_Cooper] comment: This is the region where you have the maximum concentration of auxin in the SAM (at least in a few species that have been studied). synonym: "leaf meristem (broad)" BROAD [] synonym: "維管束系葉原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:407 is_a: PO:0025430 ! phyllome anlagen relationship: part_of PO:0008016 ! vegetative shoot apical meristem created_by: Laurel_Cooper creation_date: 2012-02-07T08:40:37Z [Term] id: PO:0025433 name: root anlagen namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) that is committed to the development of a root primordium (PO:0005029)." [POC:curators] comment: Only detectable by gene expression, not morphology. May arise in a pericycle (PO:0006203), as for lateral roots in most seed plants, an endodermis (PO:0000252), as for lateral roots in ferns, or from parenchyma cells (PO:0000074) that are part a shoot axis (PO:0025029), in the case of a basal root (PO:0025002) or shoot-borne root (PO:0000042). synonym: "precursor de raí (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "根原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:427 is_a: PO:0009013 ! portion of meristem tissue created_by: Laurel_Cooper creation_date: 2012-02-08T01:00:56Z [Term] id: PO:0025477 name: floral organ primordium namespace: plant_anatomy def: "A primordium (PO:0025127) that is committed to the development of a floral organ (PO:0025395) and is part of a reproductive shoot apex (PO:0025222)." [POC:curators] comment: If annotating to a primordium of a floral structure, it is better to use the more specific term, such as petal primordium (PO:0000021) or anther primordium (PO:0006089). subset: Angiosperm synonym: "floral structure primordia (exact, plural)" EXACT [] synonym: "portion of floral structure primordium tissue (exact)" EXACT [] synonym: "primordio de organo floral (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花器官原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 is_a: PO:0025127 ! primordium relationship: part_of PO:0025222 ! reproductive shoot apex created_by: rwalls creation_date: 2012-04-26T03:57:09Z [Term] id: PO:0025478 name: androecium primordium namespace: plant_anatomy def: "A floral structure primordium (PO:0025477) that is committed to the development of an androecium (PO:0009061)." [POC:curators] comment: Use stamen primordium (PO:0004705) for the primordium (PO:0025127) of an individual stamen (PO:0009029). synonym: "portion of androecium primordium tissue (exact)" EXACT [] synonym: "primordium del androecio (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "雄蕊群原基(可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:465 is_a: PO:0025477 ! floral organ primordium created_by: rwalls creation_date: 2012-04-26T04:11:35Z [Term] id: PO:0025482 name: bract anlagen namespace: plant_anatomy def: "A phyllome anlagen (PO:0025430) that will give rise to a bract primordium (PO:0025487) and is part of a peripheral zone (PO:000225) of a reproductive shoot apical meristem (PO:0008028)." [POC:Ramona_Walls] synonym: "anlagen de bráctea (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "苞原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025430 ! phyllome anlagen created_by: rwalls creation_date: 2012-05-03T03:02:02Z [Term] id: PO:0025484 name: petal anlagen namespace: plant_anatomy def: "A phyllome anlagen (PO:0025430) that will give rise to a petal primordium (PO:0000021) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229)." [POC:Ramona_Walls] synonym: "anlagen del pétalo (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花弁原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025430 ! phyllome anlagen created_by: rwalls creation_date: 2012-05-03T03:02:03Z [Term] id: PO:0025486 name: stamen anlagen namespace: plant_anatomy def: "A phyllome anlagen (PO:0025430) that will give rise to a stamen primordium (PO:0004705) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229)." [POC:Ramona_Walls] synonym: "anlagen del estambre (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "雄蕊原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] is_a: PO:0025430 ! phyllome anlagen created_by: rwalls creation_date: 2012-05-03T03:02:03Z [Term] id: PO:0025487 name: bract primordium namespace: plant_anatomy def: "A phyllome primordium (PO:0025487) that is committed to the development of a flower bract (PO:0009055)." [POC:curators] synonym: "bract primordia (exact, plural)" EXACT [] synonym: "portion of bract primordium tissue (exact)" EXACT [] synonym: "primordio de la bráctea (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "苞原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:466 is_a: PO:0025128 ! phyllome primordium relationship: develops_from PO:0025482 ! bract anlagen relationship: part_of PO:0025222 ! reproductive shoot apex created_by: rwalls creation_date: 2012-05-03T03:04:46Z [Term] id: PO:0025488 name: flower bract primordium namespace: plant_anatomy def: "A bract primordium (PO:0025128) is committed to the development of a flower bract (PO:0009034)." [POC:Ramona_Walls] synonym: "flower bract primordia (exact, plural)" EXACT [] synonym: "portion of flower bract primordium tissue (exact)" EXACT [] synonym: "primordio de la bráctea floral (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花苞（葉）原基（可視的） (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:466 is_a: PO:0025477 ! floral organ primordium is_a: PO:0025487 ! bract primordium created_by: rwalls creation_date: 2012-05-07T08:15:32Z [Term] id: PO:0025489 name: inflorescence bract primordium namespace: plant_anatomy def: "A bract primordium (PO:0025128) is committed to the development of an inflorescence bract (PO:0009054)." [POC:Ramona_Walls] synonym: "inflorescence bract primordia (exact, plural)" EXACT [] synonym: "portion of inflorescence bract primordium tissue (related)" RELATED [] synonym: "primordio de la bráctea de la inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "花序苞原基 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:466 is_a: PO:0025487 ! bract primordium created_by: rwalls creation_date: 2012-05-07T08:15:32Z [Term] id: PO:0025496 name: multi-tissue plant structure namespace: plant_anatomy def: "A plant structure (PO:0009011) that has as parts two or more portions of plant tissue (PO:0009007) of at least two different types and which through specific morphogenetic processes forms a single structural unit demarcated by primarily bona-fide boundaries from other structural units of different types." [CARO:0000055, POC:curators] comment: Most multi-tissue plant structures have at least a small connection to other plant structures via a fiat boundary, such as where a leaf (PO:0025034) connects to a shoot axis (PO:0025029), a petal (PO:0009032) connects to a receptacle (PO:0009064), or a branch (PO:0025073) connects to a stem (PO:0009047). Refers to CARO:0000055 multi-tissue structure, def'n: Anatomical structure that has as parts two or more portions of tissue of at least two different types, and which through specific morphogenetic processes, form a single distinct structural unit demarcated by bona-fide boundries from other structural units of differnt types. synonym: "estructura vegetal con múltiples tejidos (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "複数の組織からなる植物構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:480 is_a: PO:0009011 ! plant structure created_by: Laurel_Cooper creation_date: 2012-06-11T14:57:00Z [Term] id: PO:0025497 name: collective plant structure namespace: plant_anatomy def: "A plant structure (PO:0009011) that is a proper part of a whole plant (PO:0000003) and includes two or more adjacent plant organs (PO:0009008) or adjacent cardinal organ parts (PO:0025001), along with any associated portions of plant tissue (PO:0009007)." [POC:curators] comment: This is a parent term to describe both collective organ part structure (PO:0025269) (e.g. septum), as well as collective plant organ structure (PO:0025007) (which was formerly named collective plant structure), for example shoot system (PO:0009006). synonym: "estructura vegetal colectiva (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "集合的植物構造 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:479 is_a: PO:0009011 ! plant structure created_by: Laurel_Cooper creation_date: 2012-06-11T15:09:20Z [Term] id: PO:0025498 name: cardinal part of multi-tissue plant structure namespace: plant_anatomy def: "A plant structure (PO:0009011) that is a proper part of a multi-tissue plant structure (PO:0025496) and includes portions of plant tissues (PO:0009007) of at least two different types." [POC:curators] comment: Includes cardinal parts of plant organs (PO:0025001) as well as parts of other multi-tissue plant structures. Cardinal refers to the fact that these are biologically meaningful and not arbitrary parts. Most cardinal parts of multi-tissue plant structures have both fiat and bona-fide boundaries, including parts with large fiat boundaries, such as leaf base (PO:0020040) or fruit distal end (PO:0008001), and parts with primarily bona-fide boundaries, such as leaflet (PO:0020049). synonym: "parte cardinal de estructura vegetal con múltiples tejidos (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "複数の組織からなる植物構造の基本（主要）部分 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:485 is_a: PO:0009011 ! plant structure relationship: part_of PO:0025496 ! multi-tissue plant structure created_by: Laurel_Cooper creation_date: 2012-06-11T15:28:44Z [Term] id: PO:0025522 name: tuber namespace: plant_anatomy def: "A plant axis (PO:0025004) that is radially enlarged." [POC:curators] comment: Functions in storage of photosynthate metabolites. May develop from a branch (PO:0025073) or a root (PO:0009005). If you are annotating to tuber, you should pick the more specific child term: shoot axis tuber (PO:0004543) or tuberous root tuber (PO:0025476). subset: Potato synonym: "塊茎 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:127 is_a: PO:0025004 ! plant axis created_by: Laurel_Cooper creation_date: 2012-11-20T18:35:45Z [Term] id: PO:0025527 name: shoot system development stage namespace: plant_structure_development_stage def: "A collective plant organ structure development stage (PO:0025338) that begins with the onset of the plant organ development stage (PO:0025339) and ends with either gametophyte senescent stage (PO:0025343) or sporophyte senescent stage (PO:0007017) or death." [POC:Laurel_Cooper] comment: The shoot system (PO:0009006) develops fron the shoot apical meristem (PO:0020148) in the plant embryo (PO:0009009) in vascular plants. In lower plants the gametophore (PO:0030018) arises from a gametophore meristematic apical cell (PO:0030019) in the protonema (PO:0030003). xref: PO_GIT:517 is_a: PO:0025338 ! collective plant organ structure development stage relationship: has_participant PO:0009006 ! shoot system created_by: Laurel_Cooper creation_date: 2012-12-13T18:21:19Z [Term] id: PO:0025528 name: bud development stage namespace: plant_structure_development_stage def: "A shoot system development stage (PO:0025527) that has as primary participant a bud (PO:0009006)." [POC:Laurel_Cooper] xref: PO_GIT:517 is_a: PO:0025527 ! shoot system development stage created_by: Laurel_Cooper creation_date: 2012-12-13T18:29:35Z [Term] id: PO:0025530 name: reproductive shoot system development stage namespace: plant_structure_development_stage def: "A shoot system development stage (PO:0025527) that has as primary participant a reproductive shoot system (PO:0025082)." [POC:Laurel_Cooper] xref: PO_GIT:517 is_a: PO:0025527 ! shoot system development stage created_by: Laurel_Cooper creation_date: 2012-12-13T19:01:14Z [Term] id: PO:0025594 name: ground meristem namespace: plant_anatomy def: "A portion of meristem tissue (PO:0009013) that gives rise to a portion of ground tissue (PO:0025059)." [POC:curators, POC:Laurel_Cooper] xref: PO_GIT:584 is_a: PO:0009013 ! portion of meristem tissue created_by: Laurel_Cooper creation_date: 2013-11-18T11:14:03Z [Term] id: PO:0025597 name: ear infructescence namespace: plant_anatomy def: "An infructescence (PO:0006342) in Zea species that bears kernels (i.e. caryopsis fruit; PO:0030104) on a compact ear infructescence axis (PO:0025623) and develops from the ear inflorescence (PO:0020136)." [POC:Laurel_Cooper] subset: Maize xref: PO_GIT:580 is_a: PO:0006342 ! infructescence relationship: develops_from PO:0020136 ! ear inflorescence created_by: Laurel_Cooper creation_date: 2013-12-07T11:57:21Z [Term] id: PO:0025598 name: pistillate inflorescence namespace: plant_anatomy def: "An inflorescence (PO:0009049) that includes as part only pistillate flowers (PO:0025599)." [POC:Laurel_Cooper] synonym: "carpellate inflorescence (exact)" EXACT [] synonym: "female inflorescence (related)" RELATED [] xref: PO_GIT:585 is_a: PO:0009049 ! inflorescence relationship: has_part PO:0025599 ! pistillate flower created_by: Laurel_Cooper creation_date: 2013-12-13T11:16:53Z [Term] id: PO:0025599 name: pistillate flower namespace: plant_anatomy def: "A flower (PO:0009046) that includes as part a single carpel (PO:0009030) or a gynoecium (PO:0009062), but the androecium (PO:0009061) is absent or has aborted during development." [POC:Laurel_Cooper] synonym: "carpellate flower (exact)" EXACT [] synonym: "diclinous flower (broad)" BROAD [] synonym: "female flower (related)" RELATED [CO_125:0000050] synonym: "imperfect flower (broad)" BROAD [] xref: PO_GIT:585 is_a: PO:0009046 ! flower created_by: Laurel_Cooper creation_date: 2013-12-13T11:26:58Z [Term] id: PO:0025606 name: native plant cell namespace: plant_anatomy def: "A plant cell (PO:0009002) that is either part of a multicellular whole plant (PO:0000003) 'in vivo' or a unicellular organism 'in natura' (i.e. part of a natural environment)." [POC:Laurel_Cooper] comment: A native plant cell is one that is not grown or maintained in vitro, nor part of an in vitro plant structure (PO:0000004). xref: PO_GIT:586 is_a: PO:0009002 ! plant cell created_by: Laurel_Cooper creation_date: 2014-05-13T16:51:47Z [Term] id: PO:0025615 name: rosette namespace: plant_anatomy def: "A collective leaf structure (PO:0025022) consisting of a group of rosette leaves (PO:0000014), generally borne at the base of the plant, that are separated by very short stem internodes (PO:0020142)." [POC:austin_meier, POC:Laurel_Cooper] xref: PO_GIT:302 xref: PO_GIT:603 is_a: PO:0025022 ! collective leaf structure created_by: meiera creation_date: 2015-09-23T15:41:20Z [Term] id: PO:0028002 name: sporophyte development stage namespace: plant_structure_development_stage def: "A whole plant development stage (PO:0007033) that has as primary participant a whole plant (PO:0000003) during the interval between fertilization (or apogamy) and death." [POC:curators] comment: A whole plant (PO:0000003) in the sporophyte development stage usually has twice the chromosome complement of a plant in the gametophytic phase, but may not in the case of apogamy. Examples of apogamy include both naturally occurring instances (such as sporophytes arising form haploid cells as in bryophytes or ferns) as well as in vitro instances (such as haploid embryo culture or in vitro fusion of non-gamete cells or protoplasts). During the sporophyte development stage, a plant may produce meiospores by meiosis. subset: TraitNet synonym: "fase esporofítica (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "sporophytic development stage (exact)" EXACT [] synonym: "sporophytic phase (exact)" EXACT [] synonym: "sporphyte phase (exact)" EXACT [] synonym: "胞子体発生過程 (Japanese, exact)" EXACT Japanese [NIG:Yukiko_Yamazaki] xref: PO_GIT:139 xref: PO_GIT:68 is_a: PO:0007033 ! whole plant development stage relationship: part_of PO:0025337 ! life of whole plant stage created_by: rwalls creation_date: 2010-07-15T02:56:11Z [Term] id: PO:0030104 name: caryopsis fruit namespace: plant_anatomy def: "A fruit (PO:0009001) which develops from a gynoecium (PO:0009062) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that are fused to a seed coat (PO:0009088)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, POC:Laurel_Cooper] comment: Caryopsis fruit (PO:0030104) is characteristic of the Poaceae (the grass family). Caryopsis fruits develop from a pseudomonomerous gyneocium (PO:0009062), and contain only a single seed due to the abortion of two of the three carpels (PO:0009030). The pericarp of caryopsis fruits of some bamboo species is somewhat fleshy at maturity and is fused to the seed coat; these fruits are referred to in the literature as bacoid caryopses. Examples: barley (Hordeum vulgare), rice (Oryza spp.), wheat (Triticum spp.), corn (Zea mays), sorghum (Sorghum bicolor), oat (Avena spp.), zebra grass (Miscanthus spp.), Tausch’s goatgrass (Aegilops tauschii), stiff brome (Brachypodium distachyon), cutgrass (Leersia perrieri), and foxtail millet (Setaria italica). synonym: "brown rice (exact)" EXACT [] synonym: "cariopse (exact, Spanish)" EXACT Spanish [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere] synonym: "cariópside (exact, Spanish)" EXACT Spanish [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere] synonym: "caryopse (exact, German)" EXACT German [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere] synonym: "caryopsides (exact)" EXACT [] synonym: "caryopsis (exact)" EXACT [] synonym: "cereal (exact)" EXACT [] synonym: "dehulled grain (exact)" EXACT [] synonym: "dehulled kernel (exact)" EXACT [] synonym: "grain (exact)" EXACT [] synonym: "indehiscent fruit (broad)" BROAD [] synonym: "kernel (exact)" EXACT [] synonym: "polished rice (exact)" EXACT [] xref: PO_GIT:648 is_a: PO:0009001 ! fruit [Term] id: PO:0030105 name: follicle fruit namespace: plant_anatomy def: "A fruit (PO:0009001) which develops from a carpel (PO:0009030) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that dehisce along a single fruit valve (PO:0000033)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, POC:Laurel_Cooper] comment: Examples: milkweed (Asclepias syriaca) and carolina larkspur (Delphinium carolinianum). synonym: "balgfrucht (exact, German)" EXACT German [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere] synonym: "dehiscent fruit (broad)" BROAD [] synonym: "folliceta (exact)" EXACT [] synonym: "follicle (exact)" EXACT [] synonym: "folículo (exact, Spanish)" EXACT Spanish [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere] synonym: "pod (broad)" BROAD [] xref: PO_GIT:649 is_a: PO:0009001 ! fruit [Term] id: PO:0030121 name: capitulum inflorescence namespace: plant_anatomy def: "An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of a radially-enlarged, determinate, first order inflorescence axis (PO:0025104) with sessile flowers (PO:0009046)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, PO:cooperl] comment: Many capitulum inflorescences have basal involucral bracts (PO:0009045) and are often discoid or globose in shape. Examples include sunflowers (Helianthus spp.; Asteraceae) and teasels (Dipsacus spp.; Dipsacaceae). synonym: "calathidium (exact)" EXACT [] synonym: "capitula (exact)" EXACT [] {synonymtypedef="Plural"} synonym: "capitulum (exact)" EXACT [] synonym: "head (broad)" BROAD [] synonym: "hypanthodium (narrow)" NARROW [] is_a: PO:0009049 ! inflorescence created_by: NYBG:Brandon_Sinn creation_date: 2017-04-20T12:53:49Z [Term] id: PO:0030122 name: compound capitulum inflorescence namespace: plant_anatomy def: "An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of a radially-enlarged inflorescence axis (PO:0020122), and sessile flowers (PO:0009046) on determinate higher order inflorescence axes (PO:0009081) with basal involucral bracts (PO:0009045)." [NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere] {comment="PO:cooperl"} comment: Examples include many species of daisy family (Asteraceae). The second order inflorescences (PO:0025240) of compound capitulum inflorescences are often called glomerules. synonym: "compound capitulum (exact)" EXACT [] synonym: "double capitulum (exact)" EXACT [] synonym: "glome (narrow)" NARROW [] synonym: "glomerule (narrow)" NARROW [] synonym: "heterothetic compound capitulum (narrow)" NARROW [] synonym: "heterothetic double capitulum (narrow)" NARROW [] synonym: "homothetic compound capitulum (narrow)" NARROW [] synonym: "homothetic double capitulum (narrow)" NARROW [] is_a: PO:0009049 ! inflorescence created_by: NYBG:Brandon_Sinn creation_date: 2017-04-20T12:58:48Z [Term] id: PSO:0000001 name: plant stress def: "A biological process of some plant (PO whole plant, or NCBI viridiplantae) caused by exposure to an environment containing some stressor agent." [] [Term] id: PSO:0000004 name: plant animal damage is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000011 ! biotic plant stress intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:33208 ! disease has infectious agent Metazoa relationship: RO:0014001 NCBITaxon:33208 ! disease has infectious agent Metazoa [Term] id: PSO:0000011 name: biotic plant stress is_a: BFO:0000016 ! disposition is_a: PSO:0000001 ! plant stress intersection_of: BFO:0000016 ! disposition intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae relationship: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae [Term] id: PSO:0000012 name: abiotic plant stress is_a: PSO:0000001 ! plant stress [Term] id: PSO:0000013 name: plant disease is_a: OGMS:0000031 ! disease is_a: PSO:0000011 ! biotic plant stress intersection_of: PSO:0000011 ! biotic plant stress intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:1 ! disease has infectious agent root relationship: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure relationship: RO:0014001 NCBITaxon:1 ! disease has infectious agent root property_value: http://purl.org/dc/terms/description "A biotic plant stress caused by exposure to an environment containing a biological stress agent." xsd:string [Term] id: PSO:0000020 name: Bipolaris oryzae pecky rice fungal disease alt_id: PDO:0000078 def: "A Oryza sativa disease caused a Bipolaris oryzae affecting a caryopsis fruit." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit intersection_of: RO:0014001 NCBITaxon:101162 ! disease has infectious agent Bipolaris oryzae relationship: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit relationship: RO:0014001 NCBITaxon:101162 ! disease has infectious agent Bipolaris oryzae [Term] id: PSO:0000021 name: Curvularia pecky rice fungal disease alt_id: PDO:0000075 def: "A Oryza sativa disease caused a Curvularia affecting a caryopsis fruit." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit intersection_of: RO:0014001 NCBITaxon:5502 ! disease has infectious agent Curvularia relationship: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit relationship: RO:0014001 NCBITaxon:5502 ! disease has infectious agent Curvularia [Term] id: PSO:0000022 name: Fusarium pecky rice fungal disease alt_id: PDO:0000077 def: "A Oryza sativa disease caused a Fusarium affecting a caryopsis fruit." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit intersection_of: RO:0014001 NCBITaxon:5506 ! disease has infectious agent Fusarium relationship: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit relationship: RO:0014001 NCBITaxon:5506 ! disease has infectious agent Fusarium [Term] id: PSO:0000023 name: maize Alternaria alternata minor leaf rot fungal disease alt_id: PDO:0000189 def: "A Zea mays disease caused a Alternaria alternata affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:5599 ! disease has infectious agent Alternaria alternata relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:5599 ! disease has infectious agent Alternaria alternata [Term] id: PSO:0000024 name: maize Alternaria minor leaf spot fungal disease alt_id: PDO:0000190 def: "A Zea mays disease caused a Alternaria alternata affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:5599 ! disease has infectious agent Alternaria alternata relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:5599 ! disease has infectious agent Alternaria alternata [Term] id: PSO:0000025 name: maize Alternaria minor root rot fungal disease alt_id: PDO:0000191 def: "A Zea mays disease caused a Alternaria alternata affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5599 ! disease has infectious agent Alternaria alternata relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5599 ! disease has infectious agent Alternaria alternata [Term] id: PSO:0000026 name: maize Aspergillus flavus leaf rot fungal disease alt_id: PDO:0000268 def: "A Zea mays disease caused a Aspergillus flavus affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:5059 ! disease has infectious agent Aspergillus flavus relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:5059 ! disease has infectious agent Aspergillus flavus [Term] id: PSO:0000027 name: maize Aspergillus glaucus minor leaf rot fungal disease alt_id: PDO:0000192 def: "A Zea mays disease caused a Aspergillus glaucus affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:41413 ! disease has infectious agent Aspergillus glaucus relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:41413 ! disease has infectious agent Aspergillus glaucus [Term] id: PSO:0000028 name: maize Aspergillus kernel rot fungal disease alt_id: PDO:0000253 def: "A Zea mays disease caused a Aspergillus flavus affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5059 ! disease has infectious agent Aspergillus flavus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5059 ! disease has infectious agent Aspergillus flavus [Term] id: PSO:0000029 name: maize Aspergillus minor ear rot fungal disease alt_id: PDO:0000270 def: "A Zea mays disease caused a Aspergillus affecting a ear infructescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025597 ! disease causes dysfunction of ear infructescence intersection_of: RO:0014001 NCBITaxon:5052 ! disease has infectious agent Aspergillus relationship: RO:0004025 PO:0025597 ! disease causes dysfunction of ear infructescence relationship: RO:0014001 NCBITaxon:5052 ! disease has infectious agent Aspergillus [Term] id: PSO:0000030 name: maize Aspergillus niger leaf rot fungal disease alt_id: PDO:0000267 def: "A Zea mays disease caused a Aspergillus niger affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:5061 ! disease has infectious agent Aspergillus niger relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:5061 ! disease has infectious agent Aspergillus niger [Term] id: PSO:0000031 name: maize Aureobasidium eyespot fungal disease alt_id: PDO:0000188 def: "A Zea mays disease caused a Aureobasidium zeae affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1592451 ! disease has infectious agent Aureobasidium zeae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1592451 ! disease has infectious agent Aureobasidium zeae [Term] id: PSO:0000032 name: maize bacterial disease alt_id: PDO:0000011 def: "A Zea mays disease caused a Bacteria affecting a plant structure." [] is_a: PSO:0100001 ! bacterial plant disease is_a: PSO:0100043 ! disease of corn (syn. maize) intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:2 ! disease has infectious agent Bacteria [Term] id: PSO:0000033 name: maize bacterial leaf blight and stalk rot disease alt_id: PDO:0000145 def: "A Zea mays disease caused a Paracidovorax avenae affecting a leaf." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:80867 ! disease has infectious agent Paracidovorax avenae relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:80867 ! disease has infectious agent Paracidovorax avenae [Term] id: PSO:0000034 name: maize bacterial leaf spot disease alt_id: PDO:0000146 def: "A Zea mays disease caused a Xanthomonas vasicola affecting a leaf." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:56459 ! disease has infectious agent Xanthomonas vasicola relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:56459 ! disease has infectious agent Xanthomonas vasicola [Term] id: PSO:0000035 name: maize bacterial stalk and top rot disease alt_id: PDO:0000148 def: "A Zea mays disease caused a Pectobacterium carotovorum subsp. carotovorum affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:555 ! disease has infectious agent Pectobacterium carotovorum subsp. carotovorum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:555 ! disease has infectious agent Pectobacterium carotovorum subsp. carotovorum [Term] id: PSO:0000036 name: maize bacterial stalk rot disease alt_id: PDO:0000147 def: "A Zea mays disease caused a Enterobacter cloacae subsp. dissolvens affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:69219 ! disease has infectious agent Enterobacter cloacae subsp. dissolvens relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:69219 ! disease has infectious agent Enterobacter cloacae subsp. dissolvens [Term] id: PSO:0000037 name: maize bacterial stripe disease alt_id: PDO:0000149 def: "A Zea mays disease caused a Robbsia andropogonis affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:28092 ! disease has infectious agent Robbsia andropogonis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:28092 ! disease has infectious agent Robbsia andropogonis [Term] id: PSO:0000038 name: maize Bipolaris leaf rot fungal disease alt_id: PDO:0000195 def: "A Zea mays disease caused a Bipolaris zeicola affecting a seed." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009010 ! disease causes dysfunction of seed intersection_of: RO:0014001 NCBITaxon:5017 ! disease has infectious agent Bipolaris zeicola relationship: RO:0004025 PO:0009010 ! disease causes dysfunction of seed relationship: RO:0014001 NCBITaxon:5017 ! disease has infectious agent Bipolaris zeicola [Term] id: PSO:0000039 name: maize Bipolaris minor leaf spot fungal disease alt_id: PDO:0000194 def: "A Zea mays disease caused a Bipolaris sorokiniana affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:45130 ! disease has infectious agent Bipolaris sorokiniana relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:45130 ! disease has infectious agent Bipolaris sorokiniana [Term] id: PSO:0000040 name: maize Bipolaris southern leaf blight fungal disease alt_id: PDO:0000184 def: "A Zea mays disease caused a Bipolaris maydis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:5016 ! disease has infectious agent Bipolaris maydis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:5016 ! disease has infectious agent Bipolaris maydis [Term] id: PSO:0000041 name: maize Botrytis cinerea minor leaf rot fungal disease alt_id: PDO:0000269 def: "A Zea mays disease caused a Botrytis cinerea affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:40559 ! disease has infectious agent Botrytis cinerea relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:40559 ! disease has infectious agent Botrytis cinerea [Term] id: PSO:0000042 name: maize bushy stunt phytoplasma disease alt_id: PDO:0000173 def: "A Zea mays disease caused a Maize bushy stunt phytoplasma affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:202462 ! disease has infectious agent Maize bushy stunt phytoplasma relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:202462 ! disease has infectious agent Maize bushy stunt phytoplasma [Term] id: PSO:0000043 name: maize Cercospora gray leaf spot fungal disease alt_id: PDO:0000174 def: "A Zea mays disease caused a Cercospora zeae-maydis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:135779 ! disease has infectious agent Cercospora zeae-maydis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:135779 ! disease has infectious agent Cercospora zeae-maydis [Term] id: PSO:0000044 name: maize chocolate spot bacterial disease alt_id: PDO:0000150 def: "A Zea mays disease caused a Pseudomonas coronafaciens pv. coronafaciens affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:235275 ! disease has infectious agent Pseudomonas coronafaciens pv. coronafaciens relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:235275 ! disease has infectious agent Pseudomonas coronafaciens pv. coronafaciens [Term] id: PSO:0000045 name: maize Claviceps ergot fungal disease alt_id: PDO:0000199 def: "A Zea mays disease caused a Claviceps gigantea affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:89175 ! disease has infectious agent Claviceps gigantea relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:89175 ! disease has infectious agent Claviceps gigantea [Term] id: PSO:0000046 name: maize Cochliobolus pallescens leaf spot fungal disease alt_id: PDO:0000260 def: "A Zea mays disease caused a Curvularia pallescens affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:318706 ! disease has infectious agent Curvularia pallescens relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:318706 ! disease has infectious agent Curvularia pallescens [Term] id: PSO:0000047 name: maize Cochliobolus pallescens minor leaf rot fungal disease alt_id: PDO:0000202 def: "A Zea mays disease caused a Curvularia pallescens affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:318706 ! disease has infectious agent Curvularia pallescens relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:318706 ! disease has infectious agent Curvularia pallescens [Term] id: PSO:0000048 name: maize Colletotrichum falcatum Anthracnose leaf blight fungal disease alt_id: PDO:0000249 def: "A Zea mays disease caused a Colletotrichum falcatum affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:129314 ! disease has infectious agent Colletotrichum falcatum relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:129314 ! disease has infectious agent Colletotrichum falcatum [Term] id: PSO:0000049 name: maize Colletotrichum falcatum Anthracnose stalk rot fungal disease alt_id: PDO:0000250 def: "A Zea mays disease caused a Colletotrichum falcatum affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:129314 ! disease has infectious agent Colletotrichum falcatum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:129314 ! disease has infectious agent Colletotrichum falcatum [Term] id: PSO:0000050 name: maize Colletotrichum graminicola Anthracnose leaf blight fungal disease alt_id: PDO:0000176 def: "A Zea mays disease caused a Colletotrichum graminicola affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:31870 ! disease has infectious agent Colletotrichum graminicola relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:31870 ! disease has infectious agent Colletotrichum graminicola [Term] id: PSO:0000051 name: maize Colletotrichum graminicola Anthracnose stalk rot fungal disease alt_id: PDO:0000177 def: "A Zea mays disease caused a Colletotrichum graminicola affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:31870 ! disease has infectious agent Colletotrichum graminicola relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:31870 ! disease has infectious agent Colletotrichum graminicola [Term] id: PSO:0000052 name: maize Culvularia clavata leaf spot fungal disease alt_id: PDO:0000201 def: "A Zea mays disease caused a Curvularia clavata affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:95742 ! disease has infectious agent Curvularia clavata relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:95742 ! disease has infectious agent Curvularia clavata [Term] id: PSO:0000053 name: maize Cunninghamella minor ear rot fungal disease alt_id: PDO:0000200 def: "A Zea mays disease caused a Cunninghamella affecting a ear infructescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025597 ! disease causes dysfunction of ear infructescence intersection_of: RO:0014001 NCBITaxon:4852 ! disease has infectious agent Cunninghamella relationship: RO:0004025 PO:0025597 ! disease causes dysfunction of ear infructescence relationship: RO:0014001 NCBITaxon:4852 ! disease has infectious agent Cunninghamella [Term] id: PSO:0000054 name: maize Curvularia eragrostidis leaf spot fungal disease alt_id: PDO:0000261 def: "A Zea mays disease caused a Curvularia eragrostidis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:418125 ! disease has infectious agent Curvularia eragrostidis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:418125 ! disease has infectious agent Curvularia eragrostidis [Term] id: PSO:0000055 name: maize Curvularia inaequalis leaf spot fungal disease alt_id: PDO:0000262 def: "A Zea mays disease caused a Curvularia inaequalis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:38902 ! disease has infectious agent Curvularia inaequalis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:38902 ! disease has infectious agent Curvularia inaequalis [Term] id: PSO:0000056 name: maize Curvularia intermedia leaf spot fungal disease alt_id: PDO:0000263 def: "A Zea mays disease caused a Curvularia intermedia affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:95735 ! disease has infectious agent Curvularia intermedia relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:95735 ! disease has infectious agent Curvularia intermedia [Term] id: PSO:0000057 name: maize Curvularia lunata leaf spot fungal disease alt_id: PDO:0000264 def: "A Zea mays disease caused a Curvularia lunata affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:5503 ! disease has infectious agent Curvularia lunata relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:5503 ! disease has infectious agent Curvularia lunata [Term] id: PSO:0000058 name: maize Curvularia senegalensis leaf spot fungal disease alt_id: PDO:0000265 def: "A Zea mays disease caused a Curvularia senegalensis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:215132 ! disease has infectious agent Curvularia senegalensis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:215132 ! disease has infectious agent Curvularia senegalensis [Term] id: PSO:0000059 name: maize Curvularia tuberculata leaf spot fungal disease alt_id: PDO:0000266 def: "A Zea mays disease caused a Curvularia tuberculata affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:1056642 ! disease has infectious agent Curvularia tuberculata relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:1056642 ! disease has infectious agent Curvularia tuberculata [Term] id: PSO:0000060 name: maize Dictyochaeta minor root rot fungal disease alt_id: PDO:0000204 def: "A Zea mays disease caused a Dictyochaeta fertilis affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:139969 ! disease has infectious agent Dictyochaeta fertilis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:139969 ! disease has infectious agent Dictyochaeta fertilis [Term] id: PSO:0000061 name: maize Didymella leaf spot fungal disease alt_id: PDO:0000203 def: "A Zea mays disease caused a Neoascochyta exitialis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:487631 ! disease has infectious agent Neoascochyta exitialis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:487631 ! disease has infectious agent Neoascochyta exitialis [Term] id: PSO:0000062 name: maize Diplodia leaf rot fungal disease alt_id: PDO:0000254 def: "A Zea mays disease caused a Physalospora zeicola affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:371119 ! disease has infectious agent Physalospora zeicola relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:371119 ! disease has infectious agent Physalospora zeicola [Term] id: PSO:0000063 name: maize Diplodia leaf spot fungal disease alt_id: PDO:0000258 def: "A Zea mays disease caused a Stenocarpella maydis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:238245 ! disease has infectious agent Stenocarpella maydis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:238245 ! disease has infectious agent Stenocarpella maydis [Term] id: PSO:0000064 name: maize Diplodia leaf streak fungal disease alt_id: PDO:0000259 def: "A Zea mays disease caused a Stenocarpella macrospora affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:371126 ! disease has infectious agent Stenocarpella macrospora relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:371126 ! disease has infectious agent Stenocarpella macrospora [Term] id: PSO:0000065 name: maize Diplodia stalk rot fungal disease alt_id: PDO:0000255 def: "A Zea mays disease caused a Physalospora zeicola affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:371119 ! disease has infectious agent Physalospora zeicola relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:371119 ! disease has infectious agent Physalospora zeicola [Term] id: PSO:0000066 name: maize Doratomyces leafonitis minor leaf rot fungal disease alt_id: PDO:0000205 def: "A Zea mays disease caused a Cephalotrichum stemonitis affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:186354 ! disease has infectious agent Cephalotrichum stemonitis relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:186354 ! disease has infectious agent Cephalotrichum stemonitis [Term] id: PSO:0000067 name: maize Epicoccum minor leaf spot fungal disease alt_id: PDO:0000206 def: "A Zea mays disease caused a Epicoccum nigrum affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:105696 ! disease has infectious agent Epicoccum nigrum relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:105696 ! disease has infectious agent Epicoccum nigrum [Term] id: PSO:0000069 name: maize fungal disease alt_id: PDO:0000012 def: "A Zea mays disease caused a Fungi affecting a plant structure." [] is_a: PSO:0100002 ! fungal plant disease is_a: PSO:0100043 ! disease of corn (syn. maize) intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4751 ! disease has infectious agent Fungi [Term] id: PSO:0000070 name: maize Fusarium culmorum minor leaf rot fungal disease alt_id: PDO:0000271 def: "A Zea mays disease caused a Fusarium culmorum affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:5516 ! disease has infectious agent Fusarium culmorum relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:5516 ! disease has infectious agent Fusarium culmorum [Term] id: PSO:0000071 name: maize Fusarium leaf rot fungal disease alt_id: PDO:0000247 def: "A Zea mays disease caused a Fusarium verticillioides affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:117187 ! disease has infectious agent Fusarium verticillioides relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:117187 ! disease has infectious agent Fusarium verticillioides [Term] id: PSO:0000072 name: maize Fusarium leaf rot fungal disease alt_id: PDO:0000180 def: "A Zea mays disease caused a Fusarium graminearum affecting a seed." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009010 ! disease causes dysfunction of seed intersection_of: RO:0014001 NCBITaxon:5518 ! disease has infectious agent Fusarium graminearum relationship: RO:0004025 PO:0009010 ! disease causes dysfunction of seed relationship: RO:0014001 NCBITaxon:5518 ! disease has infectious agent Fusarium graminearum [Term] id: PSO:0000073 name: maize Fusarium seedling blight fungal disease alt_id: PDO:0000181 def: "A Zea mays disease caused a Fusarium verticillioides affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:117187 ! disease has infectious agent Fusarium verticillioides relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:117187 ! disease has infectious agent Fusarium verticillioides [Term] id: PSO:0000074 name: maize Fusarium seed rot fungal disease alt_id: PDO:0000248 def: "A Zea mays disease caused a Fusarium verticillioides affecting a seed." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009010 ! disease causes dysfunction of seed intersection_of: RO:0014001 NCBITaxon:117187 ! disease has infectious agent Fusarium verticillioides relationship: RO:0004025 PO:0009010 ! disease causes dysfunction of seed relationship: RO:0014001 NCBITaxon:117187 ! disease has infectious agent Fusarium verticillioides [Term] id: PSO:0000075 name: maize Gaeumannomyces sheath rot fungal disease alt_id: PDO:0000241 def: "A Zea mays disease caused a Gaeumannomyces graminis affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:29850 ! disease has infectious agent Gaeumannomyces graminis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:29850 ! disease has infectious agent Gaeumannomyces graminis [Term] id: PSO:0000076 name: maize Gibberella leaf rot fungal disease alt_id: PDO:0000178 def: "A Zea mays disease caused a Fusarium graminearum affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:5518 ! disease has infectious agent Fusarium graminearum relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:5518 ! disease has infectious agent Fusarium graminearum [Term] id: PSO:0000077 name: maize Gibberella stalk rot fungal disease alt_id: PDO:0000179 def: "A Zea mays disease caused a Fusarium graminearum affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5518 ! disease has infectious agent Fusarium graminearum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5518 ! disease has infectious agent Fusarium graminearum [Term] id: PSO:0000078 name: maize Goss's bacterial wilt disease alt_id: PDO:0000151 def: "A Zea mays disease caused a Clavibacter michiganensis subsp. nebraskensis affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:31963 ! disease has infectious agent Clavibacter michiganensis subsp. nebraskensis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:31963 ! disease has infectious agent Clavibacter michiganensis subsp. nebraskensis [Term] id: PSO:0000079 name: maize holcus spot bacterial disease alt_id: PDO:0000152 def: "A Zea mays disease caused a Pseudomonas syringae pv. syringae affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:321 ! disease has infectious agent Pseudomonas syringae pv. syringae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:321 ! disease has infectious agent Pseudomonas syringae pv. syringae [Term] id: PSO:0000080 name: maize Hyalothyridium leaf spot fungal disease alt_id: PDO:0000232 def: "A Zea mays disease caused a Leptosphaerulina affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:55172 ! disease has infectious agent Leptosphaerulina relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:55172 ! disease has infectious agent Leptosphaerulina [Term] id: PSO:0000081 name: maize Lasiodiplodia black kernel rot fungal disease alt_id: PDO:0000218 def: "A Zea mays disease caused a Lasiodiplodia theobromae affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:45133 ! disease has infectious agent Lasiodiplodia theobromae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:45133 ! disease has infectious agent Lasiodiplodia theobromae [Term] id: PSO:0000082 name: maize Macrophomina charcoal rot fungal disease alt_id: PDO:0000222 def: "A Zea mays disease caused a Macrophomina phaseolina affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:35725 ! disease has infectious agent Macrophomina phaseolina relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:35725 ! disease has infectious agent Macrophomina phaseolina [Term] id: PSO:0000083 name: maize Magnaporthiopsis late wilt fungal disease alt_id: PDO:0000234 def: "A Zea mays disease caused a Magnaporthiopsis maydis affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:80373 ! disease has infectious agent Magnaporthiopsis maydis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:80373 ! disease has infectious agent Magnaporthiopsis maydis [Term] id: PSO:0000084 name: maize Marasmiellus borde blanco fungal disease alt_id: PDO:0000219 def: "A Zea mays disease caused a Marasmiellus affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:71896 ! disease has infectious agent Marasmiellus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:71896 ! disease has infectious agent Marasmiellus [Term] id: PSO:0000085 name: maize Microdochium zonate leaf spot fungal disease alt_id: PDO:0000246 def: "A Zea mays disease caused a Microdochium sorghi affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:1682391 ! disease has infectious agent Microdochium sorghi relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:1682391 ! disease has infectious agent Microdochium sorghi [Term] id: PSO:0000086 name: maize Myrothecium shuck rot fungal disease alt_id: PDO:0000236 def: "A Zea mays disease caused a Myrothecium gramineum affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:226117 ! disease has infectious agent Myrothecium gramineum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:226117 ! disease has infectious agent Myrothecium gramineum [Term] id: PSO:0000087 name: maize Nigrospora dry leaf rot fungal disease alt_id: PDO:0000257 def: "A Zea mays disease caused a Nigrospora oryzae affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:335854 ! disease has infectious agent Nigrospora oryzae relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:335854 ! disease has infectious agent Nigrospora oryzae [Term] id: PSO:0000088 name: maize northern leaf blight fungal disease alt_id: PDO:0000186 def: "A Zea mays disease caused a Exserohilum turcicum affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:93612 ! disease has infectious agent Exserohilum turcicum relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:93612 ! disease has infectious agent Exserohilum turcicum [Term] id: PSO:0000089 name: maize northern leaf spot fungal disease alt_id: PDO:0000183 def: "A Zea mays disease caused a Bipolaris zeicola affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:5017 ! disease has infectious agent Bipolaris zeicola relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:5017 ! disease has infectious agent Bipolaris zeicola [Term] id: PSO:0000090 name: maize Peronosclerospora java downy mildew fungal disease alt_id: PDO:0000233 def: "A Zea mays disease caused a Peronosclerospora maydis affecting a whole plant." [] is_a: PSO:0000187 ! maize oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:886949 ! disease has infectious agent Peronosclerospora maydis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:886949 ! disease has infectious agent Peronosclerospora maydis [Term] id: PSO:0000091 name: maize Peronosclerospora sorghum downy mildew fungal disease alt_id: PDO:0000238 def: "A Zea mays disease caused a Peronosclerospora sorghi affecting a whole plant." [] is_a: PSO:0000187 ! maize oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:230839 ! disease has infectious agent Peronosclerospora sorghi relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:230839 ! disease has infectious agent Peronosclerospora sorghi [Term] id: PSO:0000092 name: maize Peronosclerospora sugarcane downy mildew fungal disease alt_id: PDO:0000243 def: "A Zea mays disease caused a Peronosclerospora sacchari affecting a whole plant." [] is_a: PSO:0000187 ! maize oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:467161 ! disease has infectious agent Peronosclerospora sacchari relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:467161 ! disease has infectious agent Peronosclerospora sacchari [Term] id: PSO:0000093 name: maize yellow leaf blight fungal disease alt_id: PDO:0000245 def: "A Zea mays disease caused a Didymella maydis affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:259522 ! disease has infectious agent Didymella maydis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:259522 ! disease has infectious agent Didymella maydis [Term] id: PSO:0000094 name: maize Phaeosphaeria leaf spot fungal disease alt_id: PDO:0000235 def: "A Zea mays disease caused a Pantoea ananatis affecting a leaf." [] synonym: "maize white spot (MWS)" EXACT [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:553 ! disease has infectious agent Pantoea ananatis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:553 ! disease has infectious agent Pantoea ananatis [Term] id: PSO:0000095 name: maize Phyllachora tar spot fungal disease alt_id: PDO:0000244 def: "A Zea mays disease caused a Phyllachora maydis affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1825666 ! disease has infectious agent Phyllachora maydis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1825666 ! disease has infectious agent Phyllachora maydis [Term] id: PSO:0000096 name: maize Physoderma brown spot fungal disease alt_id: PDO:0000256 def: "A Zea mays disease caused a Physoderma maydis affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:276838 ! disease has infectious agent Physoderma maydis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:276838 ! disease has infectious agent Physoderma maydis [Term] id: PSO:0000097 name: maize Pithomyces maydicus minor leaf rot fungal disease alt_id: PDO:0000273 def: "A Zea mays disease caused a Pseudopithomyces maydicus affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:1921599 ! disease has infectious agent Pseudopithomyces maydicus relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:1921599 ! disease has infectious agent Pseudopithomyces maydicus [Term] id: PSO:0000098 name: maize Pythium stalk rot fungal disease alt_id: PDO:0000208 def: "A Zea mays disease caused a Pythium aphanidermatum affecting a whole plant." [] is_a: PSO:0000187 ! maize oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:65070 ! disease has infectious agent Pythium aphanidermatum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:65070 ! disease has infectious agent Pythium aphanidermatum [Term] id: PSO:0000099 name: maize Ramulispora grey leaf spot fungal disease alt_id: PDO:0000240 def: "A Zea mays disease caused a Ramulispora sorghi affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:135778 ! disease has infectious agent Ramulispora sorghi relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:135778 ! disease has infectious agent Ramulispora sorghi [Term] id: PSO:0000100 name: maize Rhizoctonia banded leaf fungal disease alt_id: PDO:0000252 def: "A Zea mays disease caused a Rhizoctonia solani affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani [Term] id: PSO:0000101 name: maize Rhizoctonia corticium leaf rot fungal disease alt_id: PDO:0000223 def: "A Zea mays disease caused a Rhizoctonia solani affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani [Term] id: PSO:0000102 name: maize Rhizoctonia sheath spot fungal disease alt_id: PDO:0000251 def: "A Zea mays disease caused a Rhizoctonia solani affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani [Term] id: PSO:0000103 name: maize Rhizopus microsporus minor leaf rot fungal disease alt_id: PDO:0000274 def: "A Zea mays disease caused a Rhizopus microsporus affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:58291 ! disease has infectious agent Rhizopus microsporus relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:58291 ! disease has infectious agent Rhizopus microsporus [Term] id: PSO:0000104 name: maize Rhizopus stolonifer minor leaf rot fungal disease alt_id: PDO:0000275 def: "A Zea mays disease caused a Rhizopus stolonifer affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:4846 ! disease has infectious agent Rhizopus stolonifer relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:4846 ! disease has infectious agent Rhizopus stolonifer [Term] id: PSO:0000105 name: maize Sarocladium black bundle fungal disease alt_id: PDO:0000187 def: "A Zea mays disease caused a Sarocladium strictum affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5046 ! disease has infectious agent Sarocladium strictum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5046 ! disease has infectious agent Sarocladium strictum [Term] id: PSO:0000106 name: maize Sarocladium kernel rot fungal disease alt_id: PDO:0000221 def: "A Zea mays disease caused a Sarocladium strictum affecting a caryopsis fruit." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit intersection_of: RO:0014001 NCBITaxon:5046 ! disease has infectious agent Sarocladium strictum relationship: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit relationship: RO:0014001 NCBITaxon:5046 ! disease has infectious agent Sarocladium strictum [Term] id: PSO:0000107 name: maize Sclerophthora crazy top downy mildew fungal disease alt_id: PDO:0000224 def: "A Zea mays disease caused a Sclerophthora macrospora affecting a whole plant." [] is_a: PSO:0000187 ! maize oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:467176 ! disease has infectious agent Sclerophthora macrospora relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:467176 ! disease has infectious agent Sclerophthora macrospora [Term] id: PSO:0000108 name: maize Sclerospora green leaf downy mildew fungal disease alt_id: PDO:0000230 def: "A Zea mays disease caused a Sclerospora graminicola affecting a ear inflorescence." [] is_a: PSO:0000187 ! maize oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:162130 ! disease has infectious agent Sclerospora graminicola relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:162130 ! disease has infectious agent Sclerospora graminicola [Term] id: PSO:0000109 name: maize Scopulariopsis brumptii minor leaf rot fungal disease alt_id: PDO:0000276 def: "A Zea mays disease caused a Scopulariopsis brumptii affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:40376 ! disease has infectious agent Scopulariopsis brumptii relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:40376 ! disease has infectious agent Scopulariopsis brumptii [Term] id: PSO:0000110 name: maize seed rot and leafling blight bacterial disease alt_id: PDO:0000154 def: "A Zea mays disease caused a Bacillus subtilis affecting a seed." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009010 ! disease causes dysfunction of seed intersection_of: RO:0014001 NCBITaxon:1423 ! disease has infectious agent Bacillus subtilis relationship: RO:0004025 PO:0009010 ! disease causes dysfunction of seed relationship: RO:0014001 NCBITaxon:1423 ! disease has infectious agent Bacillus subtilis [Term] id: PSO:0000111 name: maize Setosphaeria minor leaf spot fungal disease alt_id: PDO:0000207 def: "A Zea mays disease caused a Exserohilum prolatum affecting a leaf." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:39953 ! disease has infectious agent Exserohilum prolatum relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:39953 ! disease has infectious agent Exserohilum prolatum [Term] id: PSO:0000112 name: maize Setosphaeria root rot fungal disease alt_id: PDO:0000231 def: "A Zea mays disease caused a Exserohilum pedicellatum affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:119929 ! disease has infectious agent Exserohilum pedicellatum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:119929 ! disease has infectious agent Exserohilum pedicellatum [Term] id: PSO:0000113 name: maize Sphacelotheca head smut fungal disease alt_id: PDO:0000237 def: "A Zea mays disease caused a Sporisorium reilianum affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:72558 ! disease has infectious agent Sporisorium reilianum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:72558 ! disease has infectious agent Sporisorium reilianum [Term] id: PSO:0000115 name: maize Stewart's bacterial disease alt_id: PDO:0000155 def: "A Zea mays disease caused a Pantoea stewartii subsp. stewartii affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:66271 ! disease has infectious agent Pantoea stewartii subsp. stewartii relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:66271 ! disease has infectious agent Pantoea stewartii subsp. stewartii [Term] id: PSO:0000116 name: maize stunt bacterial disease alt_id: PDO:0000156 def: "A Zea mays disease caused a Spiroplasma kunkelii affecting a whole plant." [] is_a: PSO:0000032 ! maize bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:47834 ! disease has infectious agent Spiroplasma kunkelii relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:47834 ! disease has infectious agent Spiroplasma kunkelii [Term] id: PSO:0000117 name: maize Ustilaginoidea false smut fungal disease alt_id: PDO:0000242 def: "A Zea mays disease caused a Ustilaginoidea virens affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1159556 ! disease has infectious agent Ustilaginoidea virens relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1159556 ! disease has infectious agent Ustilaginoidea virens [Term] id: PSO:0000118 name: maize Ustilago smut fungal disease alt_id: PDO:0000182 def: "A Zea mays disease caused a Ustilago maydis affecting a whole plant." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5270 ! disease has infectious agent Ustilago maydis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5270 ! disease has infectious agent Ustilago maydis [Term] id: PSO:0000119 name: maize viral disease alt_id: PDO:0000013 def: "A Zea mays disease caused a Viruses affecting a plant structure." [] is_a: PSO:0100003 ! viral plant disease is_a: PSO:0100043 ! disease of corn (syn. maize) intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:10239 ! disease has infectious agent Viruses [Term] id: PSO:0000124 name: rice Achlya conspicua water-mold fungal disease alt_id: PDO:0000211 def: "A Oryza sativa disease caused a Achlya conspicua affecting a whole plant." [] is_a: PSO:0000186 ! rice oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:112027 ! disease has infectious agent Achlya conspicua relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:112027 ! disease has infectious agent Achlya conspicua [Term] id: PSO:0000125 name: rice Achlya klebsiana water-mold fungal disease alt_id: PDO:0000212 def: "A Oryza sativa disease caused a Achlya klebsiana affecting a whole plant." [] is_a: PSO:0000186 ! rice oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:4767 ! disease has infectious agent Achlya klebsiana relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:4767 ! disease has infectious agent Achlya klebsiana [Term] id: PSO:0000126 name: rice aggregate sheath spot fungal disease alt_id: PDO:0000027 def: "A Oryza sativa disease caused a Ceratorhiza oryzae-sativae affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:63189 ! disease has infectious agent Ceratorhiza oryzae-sativae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:63189 ! disease has infectious agent Ceratorhiza oryzae-sativae [Term] id: PSO:0000127 name: rice Athelia rolfsii leafling blight fungal disease alt_id: PDO:0000089 def: "A Oryza sativa disease caused a Agroathelia rolfsii affecting a seed." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009010 ! disease causes dysfunction of seed intersection_of: RO:0014001 NCBITaxon:39291 ! disease has infectious agent Agroathelia rolfsii relationship: RO:0004025 PO:0009010 ! disease causes dysfunction of seed relationship: RO:0014001 NCBITaxon:39291 ! disease has infectious agent Agroathelia rolfsii [Term] id: PSO:0000128 name: rice bacterial blight disease alt_id: PDO:0000014 def: "A Oryza sativa disease caused a Xanthomonas oryzae pv. oryzae affecting a whole plant." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:64187 ! disease has infectious agent Xanthomonas oryzae pv. oryzae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:64187 ! disease has infectious agent Xanthomonas oryzae pv. oryzae [Term] id: PSO:0000129 name: rice bacterial disease alt_id: PDO:0000003 def: "A Oryza sativa disease caused a Bacteria affecting a plant structure." [] is_a: PSO:0100001 ! bacterial plant disease is_a: PSO:0100097 ! disease of rice intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:2 ! disease has infectious agent Bacteria [Term] id: PSO:0000130 name: rice bacterial leaf streak disease alt_id: PDO:0000019 def: "A Oryza sativa disease caused a Xanthomonas oryzae pv. oryzicola affecting a leaf." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:129394 ! disease has infectious agent Xanthomonas oryzae pv. oryzicola relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:129394 ! disease has infectious agent Xanthomonas oryzae pv. oryzicola [Term] id: PSO:0000131 name: rice bacterial panicle blight disease alt_id: PDO:0000167 def: "A Oryza sativa disease caused a Burkholderia glumae AU6208 affecting a whole plant." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1176514 ! disease has infectious agent Burkholderia glumae AU6208 relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1176514 ! disease has infectious agent Burkholderia glumae AU6208 [Term] id: PSO:0000132 name: rice bakanae fungal disease alt_id: PDO:0000168 def: "A Oryza sativa disease caused a Fusarium fujikuroi affecting a whole plant." [] is_a: PSO:0000147 ! rice Fusarium seedling blight fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5127 ! disease has infectious agent Fusarium fujikuroi relationship: RO:0014001 NCBITaxon:5127 ! disease has infectious agent Fusarium fujikuroi [Term] id: PSO:0000133 name: rice Bipolaris oryzae leafling blight fungal disease alt_id: PDO:0000084 def: "A Oryza sativa disease caused a Bipolaris oryzae affecting a seed." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009010 ! disease causes dysfunction of seed intersection_of: RO:0014001 NCBITaxon:101162 ! disease has infectious agent Bipolaris oryzae relationship: RO:0004025 PO:0009010 ! disease causes dysfunction of seed relationship: RO:0014001 NCBITaxon:101162 ! disease has infectious agent Bipolaris oryzae [Term] id: PSO:0000134 name: rice black kernel fungal disease alt_id: PDO:0000029 def: "A Oryza sativa disease caused a Curvularia lunata affecting a whole plant." [] is_a: PSO:0000139 ! rice Curvularia seedling blight fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5503 ! disease has infectious agent Curvularia lunata relationship: RO:0014001 NCBITaxon:5503 ! disease has infectious agent Curvularia lunata [Term] id: PSO:0000135 name: rice black streak dwarf viral disease alt_id: PDO:0000121 def: "A Oryza sativa disease caused a Rice black streaked dwarf virus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:10990 ! disease has infectious agent Rice black streaked dwarf virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:10990 ! disease has infectious agent Rice black streaked dwarf virus [Term] id: PSO:0000136 name: rice blast fungal disease alt_id: PDO:0000031 def: "A Oryza sativa disease caused a Pyricularia oryzae affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:318829 ! disease has infectious agent Pyricularia oryzae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:318829 ! disease has infectious agent Pyricularia oryzae [Term] id: PSO:0000137 name: rice brown spot fungal disease alt_id: PDO:0000033 def: "A Oryza sativa disease caused a Bipolaris oryzae affecting a leaf." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:101162 ! disease has infectious agent Bipolaris oryzae relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:101162 ! disease has infectious agent Bipolaris oryzae [Term] id: PSO:0000138 name: rice crown sheath rot fungal disease alt_id: PDO:0000035 def: "A Oryza sativa disease caused a Gaeumannomyces graminis affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:29850 ! disease has infectious agent Gaeumannomyces graminis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:29850 ! disease has infectious agent Gaeumannomyces graminis [Term] id: PSO:0000139 name: rice Curvularia seedling blight fungal disease alt_id: PDO:0000085 def: "A Oryza sativa disease caused a Curvularia affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5502 ! disease has infectious agent Curvularia relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5502 ! disease has infectious agent Curvularia [Term] id: PSO:0000140 name: rice downy mildew fungal disease alt_id: PDO:0000037 def: "A Oryza sativa disease caused a Sclerophthora macrospora affecting a whole plant." [] is_a: PSO:0000186 ! rice oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:467176 ! disease has infectious agent Sclerophthora macrospora relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:467176 ! disease has infectious agent Sclerophthora macrospora [Term] id: PSO:0000141 name: rice dwarf viral disease alt_id: PDO:0000122 def: "A Oryza sativa disease caused a Rice dwarf virus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:10991 ! disease has infectious agent Rice dwarf virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:10991 ! disease has infectious agent Rice dwarf virus [Term] id: PSO:0000142 name: rice eyespot fungal disease alt_id: PDO:0000039 def: "A Oryza sativa disease caused a Bipolaris gigantea affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:2695822 ! disease has infectious agent Bipolaris gigantea relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:2695822 ! disease has infectious agent Bipolaris gigantea [Term] id: PSO:0000143 name: rice false smut fungal disease alt_id: PDO:0000041 def: "A Oryza sativa disease caused a Ustilaginoidea virens affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1159556 ! disease has infectious agent Ustilaginoidea virens relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1159556 ! disease has infectious agent Ustilaginoidea virens [Term] id: PSO:0000144 name: rice foot rot bacterial disease alt_id: PDO:0000020 def: "A Oryza sativa disease caused a Dickeya chrysanthemi affecting a whole plant." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:556 ! disease has infectious agent Dickeya chrysanthemi relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:556 ! disease has infectious agent Dickeya chrysanthemi [Term] id: PSO:0000145 name: rice fungal disease alt_id: PDO:0000081 def: "A Oryza sativa disease caused a Fungi affecting a plant structure." [] is_a: PSO:0100002 ! fungal plant disease is_a: PSO:0100097 ! disease of rice intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4751 ! disease has infectious agent Fungi [Term] id: PSO:0000146 name: rice Fusarium root rot fungal disease alt_id: PDO:0000209 def: "A Oryza sativa disease caused a Fusarium affecting a root." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009005 ! disease causes dysfunction of root intersection_of: RO:0014001 NCBITaxon:5506 ! disease has infectious agent Fusarium relationship: RO:0004025 PO:0009005 ! disease causes dysfunction of root relationship: RO:0014001 NCBITaxon:5506 ! disease has infectious agent Fusarium [Term] id: PSO:0000147 name: rice Fusarium seedling blight fungal disease alt_id: PDO:0000086 def: "A Oryza sativa disease caused a Fusarium affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5506 ! disease has infectious agent Fusarium relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5506 ! disease has infectious agent Fusarium [Term] id: PSO:0000149 name: rice giallume viral disease alt_id: PDO:0000120 def: "A Oryza sativa disease caused a Barley yellow dwarf virus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:12037 ! disease has infectious agent Barley yellow dwarf virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:12037 ! disease has infectious agent Barley yellow dwarf virus [Term] id: PSO:0000150 name: rice grassy stunt viral disease alt_id: PDO:0000123 def: "A Oryza sativa disease caused a Rice grassy stunt tenuivirus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:66266 ! disease has infectious agent Rice grassy stunt tenuivirus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:66266 ! disease has infectious agent Rice grassy stunt tenuivirus [Term] id: PSO:0000151 name: rice hoja blanca viral disease alt_id: PDO:0000124 def: "A Oryza sativa disease caused a Rice hoja blanca tenuivirus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:12332 ! disease has infectious agent Rice hoja blanca tenuivirus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:12332 ! disease has infectious agent Rice hoja blanca tenuivirus [Term] id: PSO:0000152 name: rice kernel smut fungal disease alt_id: PDO:0000043 def: "A Oryza sativa disease caused a Tilletia barclayana affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:157178 ! disease has infectious agent Tilletia barclayana relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:157178 ! disease has infectious agent Tilletia barclayana [Term] id: PSO:0000153 name: rice leaf rot bacterial disease alt_id: PDO:0000023 def: "A Oryza sativa disease caused a Burkholderia glumae affecting a caryopsis fruit." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit intersection_of: RO:0014001 NCBITaxon:337 ! disease has infectious agent Burkholderia glumae relationship: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit relationship: RO:0014001 NCBITaxon:337 ! disease has infectious agent Burkholderia glumae [Term] id: PSO:0000154 name: rice leaf rot fungal disease alt_id: PDO:0000059 def: "A Oryza sativa disease caused a Nakataea oryzae affecting a stem." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009047 ! disease causes dysfunction of stem intersection_of: RO:0014001 NCBITaxon:165778 ! disease has infectious agent Nakataea oryzae relationship: RO:0004025 PO:0009047 ! disease causes dysfunction of stem relationship: RO:0014001 NCBITaxon:165778 ! disease has infectious agent Nakataea oryzae [Term] id: PSO:0000155 name: rice narrow brown leaf spot fungal disease alt_id: PDO:0000049 def: "A Oryza sativa disease caused a Cercospora janseana affecting a leaf." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:706553 ! disease has infectious agent Passalora janseana relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:706553 ! disease has infectious agent Passalora janseana [Term] id: PSO:0000156 name: rice necrotic mosaic viral disease alt_id: PDO:0000125 def: "A Oryza sativa disease caused a Rice necrosis mosaic virus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:59500 ! disease has infectious agent Rice necrosis mosaic virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:59500 ! disease has infectious agent Rice necrosis mosaic virus [Term] id: PSO:0000157 name: rice phytoplasma disease alt_id: PDO:0000170 def: "A Oryza sativa disease caused a Candidatus Phytoplasma oryzae affecting a whole plant." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:203274 ! disease has infectious agent Candidatus Phytoplasma oryzae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:203274 ! disease has infectious agent Candidatus Phytoplasma oryzae [Term] id: PSO:0000158 name: rice Pythium dissotocum root rot fungal disease alt_id: PDO:0000065 def: "A Oryza sativa disease caused a Pythium dissotocum affecting a root." [] is_a: PSO:0000160 ! rice Pythium root rot fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009005 ! disease causes dysfunction of root intersection_of: RO:0014001 NCBITaxon:82936 ! disease has infectious agent Pythium dissotocum relationship: RO:0014001 NCBITaxon:82936 ! disease has infectious agent Pythium dissotocum [Term] id: PSO:0000159 name: rice Pythium dissotocum water-mold fungal disease alt_id: PDO:0000215 def: "A Oryza sativa disease caused a Pythium dissotocum affecting a whole plant." [] is_a: PSO:0000163 ! rice Pythium water-mold fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:82936 ! disease has infectious agent Pythium dissotocum relationship: RO:0014001 NCBITaxon:82936 ! disease has infectious agent Pythium dissotocum [Term] id: PSO:0000160 name: rice Pythium root rot fungal disease alt_id: PDO:0000210 def: "A Oryza sativa disease caused a Pythium affecting a root." [] is_a: PSO:0000186 ! rice oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009005 ! disease causes dysfunction of root intersection_of: RO:0014001 NCBITaxon:4797 ! disease has infectious agent Pythium relationship: RO:0004025 PO:0009005 ! disease causes dysfunction of root relationship: RO:0014001 NCBITaxon:4797 ! disease has infectious agent Pythium [Term] id: PSO:0000161 name: rice Pythium spinosum root rot fungal disease alt_id: PDO:0000073 def: "A Oryza sativa disease caused a Globisporangium spinosum affecting a root." [] is_a: PSO:0000186 ! rice oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009005 ! disease causes dysfunction of root intersection_of: RO:0014001 NCBITaxon:2125998 ! disease has infectious agent Globisporangium spinosum relationship: RO:0004025 PO:0009005 ! disease causes dysfunction of root relationship: RO:0014001 NCBITaxon:2125998 ! disease has infectious agent Globisporangium spinosum [Term] id: PSO:0000162 name: rice Pythium spinosum water-mold fungal disease alt_id: PDO:0000216 def: "A Oryza sativa disease caused a Globisporangium spinosum affecting a whole plant." [] is_a: PSO:0000186 ! rice oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:2125998 ! disease has infectious agent Globisporangium spinosum relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:2125998 ! disease has infectious agent Globisporangium spinosum [Term] id: PSO:0000163 name: rice Pythium water-mold fungal disease alt_id: PDO:0000214 def: "A Oryza sativa disease caused a Pythium affecting a whole plant." [] is_a: PSO:0000186 ! rice oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:4797 ! disease has infectious agent Pythium relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:4797 ! disease has infectious agent Pythium [Term] id: PSO:0000164 name: rice Rhizoctonia solani leafling blight fungal disease alt_id: PDO:0000087 def: "A Oryza sativa disease caused a Rhizoctonia solani affecting a seed." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009010 ! disease causes dysfunction of seed intersection_of: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani relationship: RO:0004025 PO:0009010 ! disease causes dysfunction of seed relationship: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani [Term] id: PSO:0000165 name: rice rugged stunt viral disease alt_id: PDO:0000126 def: "A Oryza sativa disease caused a Rice ragged stunt virus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:42475 ! disease has infectious agent Rice ragged stunt virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:42475 ! disease has infectious agent Rice ragged stunt virus [Term] id: PSO:0000166 name: rice sheath blight fungal disease alt_id: PDO:0000051 def: "A Oryza sativa disease caused a Rhizoctonia solani affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:456999 ! disease has infectious agent Rhizoctonia solani [Term] id: PSO:0000167 name: rice sheath brown rot bacterial disease alt_id: PDO:0000024 def: "A Oryza sativa disease caused a Pseudomonas fuscovaginae affecting a whole plant." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:50340 ! disease has infectious agent Pseudomonas fuscovaginae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:50340 ! disease has infectious agent Pseudomonas fuscovaginae [Term] id: PSO:0000168 name: rice sheath rot fungal disease alt_id: PDO:0000053 def: "A Oryza sativa disease caused a Sarocladium oryzae affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:284135 ! disease has infectious agent Sarocladium oryzae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:284135 ! disease has infectious agent Sarocladium oryzae [Term] id: PSO:0000169 name: rice sheath spot fungal disease alt_id: PDO:0000055 def: "A Oryza sativa disease caused a Waitea circinata affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:63190 ! disease has infectious agent Waitea circinata relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:63190 ! disease has infectious agent Waitea circinata [Term] id: PSO:0000170 name: rice stackburn fungal disease alt_id: PDO:0000057 def: "A Oryza sativa disease caused a Alternaria padwickii affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:714880 ! disease has infectious agent Alternaria padwickii relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:714880 ! disease has infectious agent Alternaria padwickii [Term] id: PSO:0000171 name: rice stripe viral disease alt_id: PDO:0000127 def: "A Oryza sativa disease caused a Rice stripe tenuivirus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:12331 ! disease has infectious agent Rice stripe tenuivirus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:12331 ! disease has infectious agent Rice stripe tenuivirus [Term] id: PSO:0000172 name: rice transitory yellowing viral disease alt_id: PDO:0000128 def: "A Oryza sativa disease caused a Rice yellow stunt nucleorhabdovirus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:59380 ! disease has infectious agent Rice yellow stunt nucleorhabdovirus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:59380 ! disease has infectious agent Rice yellow stunt nucleorhabdovirus [Term] id: PSO:0000173 name: rice viral disease alt_id: PDO:0000007 def: "A Oryza sativa disease caused a Viruses affecting a plant structure." [] is_a: PSO:0100003 ! viral plant disease is_a: PSO:0100097 ! disease of rice intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:10239 ! disease has infectious agent Viruses [Term] id: PSO:0000174 name: rice yellow dwarf phytoplasma disease alt_id: PDO:0000129 def: "A Oryza sativa disease caused a Candidatus Phytoplasma sp. affecting a whole plant." [] is_a: PSO:0000129 ! rice bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:2155 ! disease has infectious agent Candidatus Phytoplasma sp. relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:2155 ! disease has infectious agent Candidatus Phytoplasma sp. [Term] id: PSO:0000175 name: rice yellow mottle viral disease alt_id: PDO:0000130 def: "A Oryza sativa disease caused a Rice yellow mottle virus affecting a whole plant." [] is_a: PSO:0000173 ! rice viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:31744 ! disease has infectious agent Rice yellow mottle virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:31744 ! disease has infectious agent Rice yellow mottle virus [Term] id: PSO:0000176 name: Sarocladium oryzae pecky rice fungal disease alt_id: PDO:0000082 def: "A Oryza sativa disease caused a Sarocladium oryzae affecting a caryopsis fruit." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit intersection_of: RO:0014001 NCBITaxon:284135 ! disease has infectious agent Sarocladium oryzae relationship: RO:0004025 PO:0030104 ! disease causes dysfunction of caryopsis fruit relationship: RO:0014001 NCBITaxon:284135 ! disease has infectious agent Sarocladium oryzae [Term] id: PSO:0000177 name: wheat bacterial disease alt_id: PDO:0000008 def: "A Triticum aestivum disease caused a Bacteria affecting a plant structure." [] is_a: PSO:0100001 ! bacterial plant disease is_a: PSO:0100117 ! disease of wheat intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:2 ! disease has infectious agent Bacteria relationship: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum [Term] id: PSO:0000178 name: wheat bacterial leaf blight alt_id: PDO:0000061 def: "A Triticum aestivum disease caused a Pseudomonas syringae pv. syringae affecting a whole plant." [] is_a: PSO:0000177 ! wheat bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:321 ! disease has infectious agent Pseudomonas syringae pv. syringae relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:321 ! disease has infectious agent Pseudomonas syringae pv. syringae [Term] id: PSO:0000179 name: wheat fungal disease alt_id: PDO:0000009 def: "A Triticum aestivum disease caused a Fungi affecting a plant structure." [] is_a: PSO:0100002 ! fungal plant disease is_a: PSO:0100117 ! disease of wheat intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4751 ! disease has infectious agent Fungi relationship: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum [Term] id: PSO:0000180 name: wheat viral disease alt_id: PDO:0000010 def: "A Triticum aestivum disease caused a Viruses affecting a plant structure." [] is_a: PSO:0100003 ! viral plant disease is_a: PSO:0100117 ! disease of wheat intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:10239 ! disease has infectious agent Viruses relationship: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum [Term] id: PSO:0000181 name: maize Gonatobotrys simplex minor ear rot fungal disease alt_id: PDO:0000272 def: "A Zea mays disease caused a Gonatobotrys simplex affecting a ear infructescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0025597 ! disease causes dysfunction of ear infructescence intersection_of: RO:0014001 NCBITaxon:2713053 ! disease has infectious agent Gonatobotrys simplex relationship: RO:0004025 PO:0025597 ! disease causes dysfunction of ear infructescence relationship: RO:0014001 NCBITaxon:2713053 ! disease has infectious agent Gonatobotrys simplex [Term] id: PSO:0000182 name: maize Ascochyta ischaemi yellow leaf blight fungal disease alt_id: PDO:0000217 def: "A Zea mays disease caused a Ascochyta affecting a ear inflorescence." [] is_a: PSO:0000069 ! maize fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:5453 ! disease has infectious agent Ascochyta relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:5453 ! disease has infectious agent Ascochyta [Term] id: PSO:0000183 name: rice leaf smut fungal disease alt_id: PDO:0000045 def: "A Oryza sativa disease caused a Eballistra oryzae affecting a ear inflorescence." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence intersection_of: RO:0014001 NCBITaxon:127114 ! disease has infectious agent Eballistra oryzae relationship: RO:0004025 PO:0020136 ! disease causes dysfunction of ear inflorescence relationship: RO:0014001 NCBITaxon:127114 ! disease has infectious agent Eballistra oryzae [Term] id: PSO:0000184 name: Microdochium oryzae pecky rice fungal disease alt_id: PDO:0000079 def: "A Oryza sativa disease caused a Microdochium albescens affecting a whole plant." [] is_a: PSO:0000145 ! rice fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1682384 ! disease has infectious agent Microdochium albescens relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1682384 ! disease has infectious agent Microdochium albescens [Term] id: PSO:0000185 name: wheat oomycete disease def: "A Triticum aestivum disease caused a Oomycota affecting a plant structure." [] is_a: PSO:0100005 ! oomycete plant disease is_a: PSO:0100117 ! disease of wheat intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4762 ! disease has infectious agent Oomycota relationship: RO:0002162 NCBITaxon:4565 ! in taxon Triticum aestivum [Term] id: PSO:0000186 name: rice oomycete disease def: "A Oryza sativa disease caused a Oomycota affecting a plant structure." [] is_a: PSO:0100005 ! oomycete plant disease is_a: PSO:0100097 ! disease of rice intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4762 ! disease has infectious agent Oomycota [Term] id: PSO:0000187 name: maize oomycete disease def: "A Zea mays disease caused a Oomycota affecting a plant structure." [] is_a: PSO:0100005 ! oomycete plant disease is_a: PSO:0100043 ! disease of corn (syn. maize) intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4762 ! disease has infectious agent Oomycota [Term] id: PSO:0000188 name: cassava oomycete disease def: "A Manihot esculenta disease caused a Oomycota affecting a plant structure." [] is_a: PSO:0100005 ! oomycete plant disease is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4762 ! disease has infectious agent Oomycota [Term] id: PSO:0000189 name: cassava fungal disease def: "A Manihot esculenta disease caused a Fungi affecting a plant structure." [] is_a: PSO:0100002 ! fungal plant disease is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4751 ! disease has infectious agent Fungi [Term] id: PSO:0000190 name: cassava bacterial disease def: "A Manihot esculenta disease caused a Bacteria affecting a plant structure." [] is_a: PSO:0100001 ! bacterial plant disease is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:2 ! disease has infectious agent Bacteria [Term] id: PSO:0000191 name: cassava viral disease def: "A Manihot esculenta disease caused a Viruses affecting a plant structure." [] is_a: PSO:0100003 ! viral plant disease is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:10239 ! disease has infectious agent Viruses [Term] id: PSO:0000192 name: african cassava mosaic def: "A Manihot esculenta disease caused a African cassava mosaic virus affecting a whole plant." [] synonym: "cassava latent|ACMV00" EXACT [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:10817 ! disease has infectious agent African cassava mosaic virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:10817 ! disease has infectious agent African cassava mosaic virus [Term] id: PSO:0000193 name: antholysis def: "A Manihot esculenta disease caused a Candidatus Phytoplasma affecting a whole plant." [] is_a: PSO:0000190 ! cassava bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:33926 ! disease has infectious agent Candidatus Phytoplasma relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:33926 ! disease has infectious agent Candidatus Phytoplasma [Term] id: PSO:0000194 name: anthracnose def: "A Manihot esculenta disease caused a Colletotrichum graminicola affecting a whole plant." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:31870 ! disease has infectious agent Colletotrichum graminicola relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:31870 ! disease has infectious agent Colletotrichum graminicola [Term] id: PSO:0000195 name: anthracnose def: "A Manihot esculenta disease caused a Colletotrichum gloeosporioides affecting a whole plant." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:474922 ! disease has infectious agent Colletotrichum gloeosporioides relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:474922 ! disease has infectious agent Colletotrichum gloeosporioides [Term] id: PSO:0000196 name: armillaria root rot def: "A Manihot esculenta disease caused a Armillaria mellea affecting a root system." [] synonym: "shoestring root rot" EXACT [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:47429 ! disease has infectious agent Armillaria mellea relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:47429 ! disease has infectious agent Armillaria mellea [Term] id: PSO:0000197 name: bacterial angular leaf spot def: "A Manihot esculenta disease caused a Xanthomonas cassavae affecting a leaf." [] is_a: PSO:0000190 ! cassava bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:56450 ! disease has infectious agent Xanthomonas cassavae relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:56450 ! disease has infectious agent Xanthomonas cassavae [Term] id: PSO:0000198 name: bacterial blight def: "A Manihot esculenta disease caused a Xanthomonas phaseoli pv. manihotis affecting a whole plant." [] synonym: "bacterial blight of cassava|XANTMN" EXACT [] is_a: PSO:0000190 ! cassava bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:43353 ! disease has infectious agent Xanthomonas phaseoli pv. manihotis relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:43353 ! disease has infectious agent Xanthomonas phaseoli pv. manihotis [Term] id: PSO:0000199 name: bacterial stem gall def: "A Manihot esculenta disease caused a Agrobacterium tumefaciens affecting a stem." [] is_a: PSO:0000190 ! cassava bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009047 ! disease causes dysfunction of stem intersection_of: RO:0014001 NCBITaxon:358 ! disease has infectious agent Agrobacterium tumefaciens relationship: RO:0004025 PO:0009047 ! disease causes dysfunction of stem relationship: RO:0014001 NCBITaxon:358 ! disease has infectious agent Agrobacterium tumefaciens [Term] id: PSO:0000200 name: bacterial stem rot def: "A Manihot esculenta disease caused a Pectobacterium carotovorum subsp. carotovorum affecting a stem." [] is_a: PSO:0000190 ! cassava bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009047 ! disease causes dysfunction of stem intersection_of: RO:0014001 NCBITaxon:555 ! disease has infectious agent Pectobacterium carotovorum subsp. carotovorum relationship: RO:0004025 PO:0009047 ! disease causes dysfunction of stem relationship: RO:0014001 NCBITaxon:555 ! disease has infectious agent Pectobacterium carotovorum subsp. carotovorum [Term] id: PSO:0000201 name: bacterial wilt def: "A Manihot esculenta disease caused a Pantoea agglomerans affecting a whole plant." [] is_a: PSO:0000190 ! cassava bacterial disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:549 ! disease has infectious agent Pantoea agglomerans relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:549 ! disease has infectious agent Pantoea agglomerans [Term] id: PSO:0000202 name: black root and stem rot def: "A Manihot esculenta disease caused a Scytalidium sp. affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:1715249 ! disease has infectious agent Scytalidium sp. relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:1715249 ! disease has infectious agent Scytalidium sp. [Term] id: PSO:0000203 name: black root and stem rot def: "A Manihot esculenta disease caused a Scytalidium sp. affecting a stem." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009047 ! disease causes dysfunction of stem intersection_of: RO:0014001 NCBITaxon:1715249 ! disease has infectious agent Scytalidium sp. relationship: RO:0004025 PO:0009047 ! disease causes dysfunction of stem relationship: RO:0014001 NCBITaxon:1715249 ! disease has infectious agent Scytalidium sp. [Term] id: PSO:0000204 name: blight leaf spot def: "A Manihot esculenta disease caused a Cercospora affecting a leaf." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:29002 ! disease has infectious agent Cercospora relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:29002 ! disease has infectious agent Cercospora [Term] id: PSO:0000205 name: brown leaf spot def: "A Manihot esculenta disease caused a Clypeosphaerella calotropidis affecting a leaf." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:2059737 ! disease has infectious agent Clypeosphaerella calotropidis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:2059737 ! disease has infectious agent Clypeosphaerella calotropidis [Term] id: PSO:0000206 name: cassava ash def: "A Manihot esculenta disease caused a Oidium affecting a whole plant." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:62703 ! disease has infectious agent Oidium relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:62703 ! disease has infectious agent Oidium [Term] id: PSO:0000207 name: cassava common mosaic def: "A Manihot esculenta disease caused a Cassava common mosaic virus affecting a whole plant." [] synonym: "mosaic of cassava|CSCMV0" EXACT [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:39046 ! disease has infectious agent Cassava common mosaic virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:39046 ! disease has infectious agent Cassava common mosaic virus [Term] id: PSO:0000208 name: cassava frogskin def: "A Manihot esculenta disease caused a Cassava frogskin virus affecting a whole plant." [] synonym: "frogskin of cassava|CVFS00" EXACT [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:344905 ! disease has infectious agent Cassava frogskin virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:344905 ! disease has infectious agent Cassava frogskin virus [Term] id: PSO:0000209 name: cassava green mottle def: "A Manihot esculenta disease caused a Cassava green mottle virus affecting a whole plant." [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:2170033 ! disease has infectious agent Cassava green mottle virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:2170033 ! disease has infectious agent Cassava green mottle virus [Term] id: PSO:0000210 name: cassava symptomless infections def: "A Manihot esculenta disease caused a Cassava Ivorian bacilliform virus affecting a whole plant." [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1464778 ! disease has infectious agent Cassava Ivorian bacilliform virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1464778 ! disease has infectious agent Cassava Ivorian bacilliform virus [Term] id: PSO:0000211 name: cassava vein mosaic def: "A Manihot esculenta disease caused a Cassava vein mosaic virus affecting a whole plant." [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:38062 ! disease has infectious agent Cassava vein mosaic virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:38062 ! disease has infectious agent Cassava vein mosaic virus [Term] id: PSO:0000212 name: concentric ring leaf spot def: "A Manihot esculenta disease caused a Phyllostictina affecting a leaf." [] synonym: "Rosellinia root rot" EXACT [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:2082570 ! disease has infectious agent Phyllostictina relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:2082570 ! disease has infectious agent Phyllostictina [Term] id: PSO:0000213 name: dematophora root rot def: "A Manihot esculenta disease caused a Rosellinia necatrix affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:77044 ! disease has infectious agent Rosellinia necatrix relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:77044 ! disease has infectious agent Rosellinia necatrix [Term] id: PSO:0000214 name: diplodia root and stem rot def: "A Manihot esculenta disease caused a Diplodia affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:66735 ! disease has infectious agent Diplodia relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:66735 ! disease has infectious agent Diplodia [Term] id: PSO:0000215 name: diplodia root and stem rot def: "A Manihot esculenta disease caused a Diplodia affecting a stem." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009047 ! disease causes dysfunction of stem intersection_of: RO:0014001 NCBITaxon:66735 ! disease has infectious agent Diplodia relationship: RO:0004025 PO:0009047 ! disease causes dysfunction of stem relationship: RO:0014001 NCBITaxon:66735 ! disease has infectious agent Diplodia [Term] id: PSO:0000216 name: fusarium root rot def: "A Manihot esculenta disease caused a Fusarium solani affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:169388 ! disease has infectious agent Fusarium solani relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:169388 ! disease has infectious agent Fusarium solani [Term] id: PSO:0000217 name: fusarium root rot def: "A Manihot esculenta disease caused a Fusarium oxysporum affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:5507 ! disease has infectious agent Fusarium oxysporum relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:5507 ! disease has infectious agent Fusarium oxysporum [Term] id: PSO:0000218 name: indian cassava mosaic def: "A Manihot esculenta disease caused a Indian cassava mosaic virus affecting a whole plant." [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:31600 ! disease has infectious agent Indian cassava mosaic virus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:31600 ! disease has infectious agent Indian cassava mosaic virus [Term] id: PSO:0000219 name: phytophthora root rot def: "A Manihot esculenta disease caused a Phytophthora cryptogea affecting a root system." [] is_a: PSO:0000188 ! cassava oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:4786 ! disease has infectious agent Phytophthora cryptogea relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:4786 ! disease has infectious agent Phytophthora cryptogea [Term] id: PSO:0000220 name: phytophthora root rot def: "A Manihot esculenta disease caused a Phytophthora drechsleri affecting a root system." [] is_a: PSO:0000188 ! cassava oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:4794 ! disease has infectious agent Phytophthora drechsleri relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:4794 ! disease has infectious agent Phytophthora drechsleri [Term] id: PSO:0000221 name: phytophthora root rot def: "A Manihot esculenta disease caused a Phytophthora erythroseptica affecting a root system." [] is_a: PSO:0000188 ! cassava oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:111171 ! disease has infectious agent Phytophthora erythroseptica relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:111171 ! disease has infectious agent Phytophthora erythroseptica [Term] id: PSO:0000222 name: phytophthora root rot def: "A Manihot esculenta disease caused a Phytophthora nicotianae affecting a root system." [] is_a: PSO:0000188 ! cassava oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:4790 ! disease has infectious agent Phytophthora nicotianae relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:4790 ! disease has infectious agent Phytophthora nicotianae [Term] id: PSO:0000223 name: pythium root rot def: "A Manihot esculenta disease caused a Pythium affecting a root system." [] is_a: PSO:0000188 ! cassava oomycete disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:4797 ! disease has infectious agent Pythium relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:4797 ! disease has infectious agent Pythium [Term] id: PSO:0000224 name: rigidopurus root rot def: "A Manihot esculenta disease caused a Rigidoporus microporus affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:219653 ! disease has infectious agent Rigidoporus microporus relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:219653 ! disease has infectious agent Rigidoporus microporus [Term] id: PSO:0000225 name: rust def: "A Manihot esculenta disease caused a Uromyces affecting a whole plant." [] synonym: "southern blight" EXACT [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:5263 ! disease has infectious agent Uromyces relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:5263 ! disease has infectious agent Uromyces [Term] id: PSO:0000226 name: sclerotium root rot def: "A Manihot esculenta disease caused a Agroathelia rolfsii affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:39291 ! disease has infectious agent Agroathelia rolfsii relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:39291 ! disease has infectious agent Agroathelia rolfsii [Term] id: PSO:0000227 name: superelongation def: "A Manihot esculenta disease caused a Sphaceloma manihoticola affecting a whole plant." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:49223 ! disease has infectious agent Sphaceloma manihoticola relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:49223 ! disease has infectious agent Sphaceloma manihoticola [Term] id: PSO:0000228 name: verticillium root and stem rot def: "A Manihot esculenta disease caused a Verticillium dahliae affecting a root system." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:27337 ! disease has infectious agent Verticillium dahliae relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:27337 ! disease has infectious agent Verticillium dahliae [Term] id: PSO:0000229 name: verticillium root and stem rot def: "A Manihot esculenta disease caused a Verticillium dahliae affecting a stem." [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009047 ! disease causes dysfunction of stem intersection_of: RO:0014001 NCBITaxon:27337 ! disease has infectious agent Verticillium dahliae relationship: RO:0004025 PO:0009047 ! disease causes dysfunction of stem relationship: RO:0014001 NCBITaxon:27337 ! disease has infectious agent Verticillium dahliae [Term] id: PSO:0000230 name: white leaf spot def: "A Manihot esculenta disease caused a Phaeoramularia manihotis affecting a leaf." [] synonym: "white leaf spot of cassava|CERCCB" EXACT [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:140759 ! disease has infectious agent Phaeoramularia manihotis relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:140759 ! disease has infectious agent Phaeoramularia manihotis [Term] id: PSO:0000231 name: cassava witches' broom def: "A Manihot esculenta disease caused a Cassava witches'-broom phytoplasma affecting a whole plant." [] synonym: "witches' broom of cassava|CVWB00" EXACT [] is_a: PSO:0000193 ! antholysis intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1194542 ! disease has infectious agent Cassava witches'-broom phytoplasma relationship: RO:0014001 NCBITaxon:1194542 ! disease has infectious agent Cassava witches'-broom phytoplasma [Term] id: PSO:0000232 name: cassava scale def: "A Manihot esculenta animal damage stress caused by Aonidomytilus affecting a whole plant." [] synonym: "tapioca scale|AONMAL" EXACT [] is_a: PSO:0100006 ! insect damage is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:340519 ! disease has infectious agent Aonidomytilus relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:340519 ! disease has infectious agent Aonidomytilus [Term] id: PSO:0000233 name: cassava whitefly def: "A Manihot esculenta animal damage stress caused by Bemisia tabaci affecting a in vitro plant structure." [] synonym: "Bemisia tabaci disease|BEMITA" EXACT [] is_a: PSO:0100006 ! insect damage is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000004 ! disease causes dysfunction of in vitro plant structure intersection_of: RO:0014001 NCBITaxon:7038 ! disease has infectious agent Bemisia tabaci relationship: RO:0004025 PO:0000004 ! disease causes dysfunction of in vitro plant structure relationship: RO:0014001 NCBITaxon:7038 ! disease has infectious agent Bemisia tabaci [Term] id: PSO:0000234 name: caliothrips masculinus def: "A Manihot esculenta animal damage stress caused by Caliothrips affecting a whole plant." [] synonym: "CALHMA" EXACT [] is_a: PSO:0100006 ! insect damage is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1182844 ! disease has infectious agent Caliothrips relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1182844 ! disease has infectious agent Caliothrips [Term] id: PSO:0000235 name: cassava brown streak virus def: "A Manihot esculenta disease caused a Cassava brown streak virus affecting a leaf." [] synonym: "CBSV|Cassava brown streak disease|CBSAV0" EXACT [] is_a: PSO:0000191 ! cassava viral disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:137758 ! disease has infectious agent Cassava brown streak virus relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:137758 ! disease has infectious agent Cassava brown streak virus [Term] id: PSO:0000236 name: cassava green mite def: "A Manihot esculenta animal damage stress caused by Mononychellus tanajoa affecting a whole plant." [] synonym: "cassava mite|MONNTA" EXACT [] is_a: PSO:0000240 ! arachnid damage is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:1602343 ! disease has infectious agent Mononychellus tanajoa relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:1602343 ! disease has infectious agent Mononychellus tanajoa [Term] id: PSO:0000237 name: acaro solitario def: "A Manihot esculenta animal damage stress caused by Oligonychus affecting a leaf." [] synonym: "OLIGPE" EXACT [] is_a: PSO:0000240 ! arachnid damage is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf intersection_of: RO:0014001 NCBITaxon:50018 ! disease has infectious agent Oligonychus relationship: RO:0004025 PO:0025034 ! disease causes dysfunction of leaf relationship: RO:0014001 NCBITaxon:50018 ! disease has infectious agent Oligonychus [Term] id: PSO:0000238 name: cassava mealybug def: "A Manihot esculenta animal damage stress caused by Phenacoccus manihoti affecting a whole plant." [] synonym: "cassava mealybug disease|PHENMA" EXACT [] is_a: PSO:0100006 ! insect damage is_a: PSO:0100033 ! disease of cassava intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant intersection_of: RO:0014001 NCBITaxon:483259 ! disease has infectious agent Phenacoccus manihoti relationship: RO:0004025 PO:0000003 ! disease causes dysfunction of whole plant relationship: RO:0014001 NCBITaxon:483259 ! disease has infectious agent Phenacoccus manihoti [Term] id: PSO:0000239 name: root rot of cassava def: "A Manihot esculenta disease caused a Piptoporellus baudonii affecting a root system." [] synonym: "PSPHBA" EXACT [] is_a: PSO:0000189 ! cassava fungal disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0025025 ! disease causes dysfunction of root system intersection_of: RO:0014001 NCBITaxon:2734650 ! disease has infectious agent Piptoporellus baudonii relationship: RO:0004025 PO:0025025 ! disease causes dysfunction of root system relationship: RO:0014001 NCBITaxon:2734650 ! disease has infectious agent Piptoporellus baudonii [Term] id: PSO:0000240 name: arachnid damage def: "A Viridiplantae animal damage stress caused by Arachnida affecting a plant structure." [] is_a: PSO:0000004 ! plant animal damage intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:6854 ! disease has infectious agent Arachnida relationship: RO:0014001 NCBITaxon:6854 ! disease has infectious agent Arachnida [Term] id: PSO:0000241 name: bird damage def: "A Viridiplantae animal damage stress caused by Aves affecting a plant structure." [] is_a: PSO:0000004 ! plant animal damage intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:8782 ! disease has infectious agent Aves relationship: RO:0014001 NCBITaxon:8782 ! disease has infectious agent Aves [Term] id: PSO:0000242 name: rodent damage def: "A Viridiplantae animal damage stress caused by Glires affecting a plant structure." [] is_a: PSO:0000004 ! plant animal damage intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:314147 ! disease has infectious agent Glires relationship: RO:0014001 NCBITaxon:314147 ! disease has infectious agent Glires [Term] id: PSO:0100001 name: bacterial plant disease alt_id: PDO:0000002 def: "A Viridiplantae disease caused a Bacteria affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:2 ! disease has infectious agent Bacteria relationship: RO:0014001 NCBITaxon:2 ! disease has infectious agent Bacteria [Term] id: PSO:0100002 name: fungal plant disease alt_id: PDO:0000004 def: "A Viridiplantae disease caused a Fungi affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4751 ! disease has infectious agent Fungi relationship: RO:0014001 NCBITaxon:4751 ! disease has infectious agent Fungi [Term] id: PSO:0100003 name: viral plant disease alt_id: PDO:0000005 def: "A Viridiplantae disease caused a Viruses affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:10239 ! disease has infectious agent Viruses relationship: RO:0014001 NCBITaxon:10239 ! disease has infectious agent Viruses [Term] id: PSO:0100004 name: nematode damage def: "A Viridiplantae animal damage stress caused by Nematoda affecting a plant structure." [] is_a: PSO:0000004 ! plant animal damage intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:6231 ! disease has infectious agent Nematoda relationship: RO:0014001 NCBITaxon:6231 ! disease has infectious agent Nematoda [Term] id: PSO:0100005 name: oomycete plant disease def: "A Viridiplantae disease caused a Oomycota affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:4762 ! disease has infectious agent Oomycota relationship: RO:0014001 NCBITaxon:4762 ! disease has infectious agent Oomycota [Term] id: PSO:0100006 name: insect damage def: "A Viridiplantae animal damage stress caused by Insecta affecting a plant structure." [] is_a: PSO:0000004 ! plant animal damage intersection_of: PSO:0000004 ! plant animal damage intersection_of: RO:0002162 NCBITaxon:33090 ! in taxon Viridiplantae intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:50557 ! disease has infectious agent Insecta relationship: RO:0014001 NCBITaxon:50557 ! disease has infectious agent Insecta [Term] id: PSO:0100033 name: disease of cassava def: "A Manihot esculenta disease caused a root affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:1 ! disease has infectious agent root relationship: RO:0002162 NCBITaxon:3983 ! in taxon Manihot esculenta [Term] id: PSO:0100043 name: disease of corn (syn. maize) def: "A Zea mays disease caused a root affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:1 ! disease has infectious agent root relationship: RO:0002162 NCBITaxon:4577 ! in taxon Zea mays [Term] id: PSO:0100060 name: disease of grape def: "A Vitis disease caused a root affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:3603 ! in taxon Vitis intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:1 ! disease has infectious agent root relationship: RO:0002162 NCBITaxon:3603 ! in taxon Vitis [Term] id: PSO:0100092 name: disease of potato def: "A Solanum tuberosum disease caused a root affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4113 ! in taxon Solanum tuberosum intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:1 ! disease has infectious agent root relationship: RO:0002162 NCBITaxon:4113 ! in taxon Solanum tuberosum [Term] id: PSO:0100097 name: disease of rice def: "A Oryza sativa disease caused a root affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:1 ! disease has infectious agent root relationship: RO:0002162 NCBITaxon:4530 ! in taxon Oryza sativa [Term] id: PSO:0100117 name: disease of wheat def: "A Triticum disease caused a root affecting a plant structure." [] is_a: PSO:0000013 ! plant disease intersection_of: PSO:0000013 ! plant disease intersection_of: RO:0002162 NCBITaxon:4564 ! in taxon Triticum intersection_of: RO:0004025 PO:0009011 ! disease causes dysfunction of plant structure intersection_of: RO:0014001 NCBITaxon:1 ! disease has infectious agent root relationship: RO:0002162 NCBITaxon:4564 ! in taxon Triticum [Term] id: UBERON:0000465 name: material anatomical entity def: "Anatomical entity that has mass." [http://orcid.org/0000-0001-9114-8737] subset: common_anatomy subset: upper_level xref: AAO:0010264 xref: AEO:0000006 xref: BILA:0000006 xref: CARO:0000006 xref: EHDAA2:0003006 xref: FBbt:00007016 xref: FMA:67165 xref: HAO:0000006 xref: TAO:0001836 xref: TGMA:0001826 xref: VHOG:0001721 is_a: BFO:0000040 ! material entity is_a: UBERON:0001062 ! anatomical entity property_value: RO:0002175 NCBITaxon:33090 property_value: RO:0002175 NCBITaxon:4751 [Term] id: UBERON:0001062 name: anatomical entity def: "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species." [FMA:62955, http://orcid.org/0000-0001-9114-8737] subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 xref: EHDAA2:0002229 xref: FBbt:10000000 xref: FMA:62955 xref: HAO:0000000 xref: MA:0000001 xref: NCIT:C12219 xref: TAO:0100000 xref: TGMA:0001822 xref: UMLS:C1515976 {source="ncithesaurus:Anatomic_Structure_System_or_Substance"} xref: WBbt:0000100 xref: XAO:0000000 xref: ZFA:0100000 is_a: BFO:0000004 ! independent continuant property_value: RO:0002175 NCBITaxon:33090 property_value: RO:0002175 NCBITaxon:4751 [Term] id: UPHENO:0001001 name: phenotype is_a: PATO:0000001 ! quality [Typedef] id: BFO:0000066 domain: BFO:0000003 ! occurrent range: BFO:0000004 ! independent continuant holds_over_chain: part_of BFO:0000066 inverse_of: BFO:0000067 transitive_over: part_of ! part_of [Typedef] id: RO:0000052 name: characteristic of def: "a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence." [] comment: Note that this relation was previously called "inheres in", but was changed to be called "characteristic of" because BFO2 uses "inheres in" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing. property_value: IAO:0000111 "inheres in" xsd:string property_value: IAO:0000112 "this fragility is a characteristic of this vase" xsd:string property_value: IAO:0000112 "this red color is a characteristic of this apple" xsd:string property_value: IAO:0000118 "inheres_in" xsd:string property_value: RO:0001900 RO:0001901 is_functional: true is_a: RO:0002314 ! characteristic of part of inverse_of: RO:0000053 ! has characteristic [Typedef] id: RO:0000053 name: has characteristic def: "Inverse of characteristic_of" [] property_value: IAO:0000111 "bearer of" xsd:string property_value: IAO:0000112 "this apple is bearer of this red color" xsd:string property_value: IAO:0000112 "this vase is bearer of this fragility" xsd:string property_value: IAO:0000116 "A bearer can have many dependents, and its dependents can exist for different periods of time, but none of its dependents can exist when the bearer does not exist." xsd:string property_value: IAO:0000118 "bearer_of" xsd:string property_value: IAO:0000118 "is bearer of" xsd:string property_value: RO:0001900 RO:0001901 range: BFO:0000020 ! specifically dependent continuant is_inverse_functional: true [Typedef] id: RO:0000079 name: function of def: "a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence" [] comment: This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020. property_value: IAO:0000112 "this catalysis function is a function of this enzyme" xsd:string property_value: IAO:0000116 "A function inheres in its bearer at all times for which the function exists, however the function need not be realized at all the times that the function exists." xsd:string property_value: IAO:0000118 "function_of" xsd:string property_value: IAO:0000118 "is function of" xsd:string domain: BFO:0000034 ! function is_a: RO:0000052 ! characteristic of inverse_of: RO:0000085 ! has function [Typedef] id: RO:0000080 name: quality of def: "a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence" [] comment: This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020. property_value: IAO:0000112 "this red color is a quality of this apple" xsd:string property_value: IAO:0000116 "A quality inheres in its bearer at all times for which the quality exists." xsd:string property_value: IAO:0000118 "is quality of" xsd:string property_value: IAO:0000118 "quality_of" xsd:string is_a: RO:0000052 ! characteristic of inverse_of: RO:0000086 ! has quality [Typedef] id: RO:0000081 name: role of def: "a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence" [] comment: This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020. property_value: IAO:0000112 "this investigator role is a role of this person" xsd:string property_value: IAO:0000116 "A role inheres in its bearer at all times for which the role exists, however the role need not be realized at all the times that the role exists." xsd:string property_value: IAO:0000118 "is role of" xsd:string property_value: IAO:0000118 "role_of" xsd:string is_a: RO:0000052 ! characteristic of inverse_of: RO:0000087 ! has role [Typedef] id: RO:0000085 name: has function def: "a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence" [] property_value: IAO:0000112 "this enzyme has function this catalysis function (more colloquially: this enzyme has this catalysis function)" xsd:string property_value: IAO:0000116 "A bearer can have many functions, and its functions can exist for different periods of time, but none of its functions can exist when the bearer does not exist. A function need not be realized at all the times that the function exists." xsd:string property_value: IAO:0000118 "has_function" xsd:string domain: BFO:0000004 ! independent continuant range: BFO:0000034 ! function is_a: RO:0000053 ! has characteristic [Typedef] id: RO:0000086 name: has quality def: "a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence" [] property_value: IAO:0000112 "this apple has quality this red color" xsd:string property_value: IAO:0000116 "A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist." xsd:string property_value: IAO:0000118 "has_quality" xsd:string range: BFO:0000019 ! quality is_a: RO:0000053 ! has characteristic [Typedef] id: RO:0000087 name: has role def: "a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence" [] property_value: IAO:0000112 "this person has role this investigator role (more colloquially: this person has this role of investigator)" xsd:string property_value: IAO:0000116 "A bearer can have many roles, and its roles can exist for different periods of time, but none of its roles can exist when the bearer does not exist. A role need not be realized at all the times that the role exists." xsd:string property_value: IAO:0000118 "has_role" xsd:string domain: BFO:0000004 ! independent continuant range: BFO:0000023 ! role is_a: RO:0000053 ! has characteristic [Typedef] id: RO:0000091 name: has disposition def: "a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence" [] domain: BFO:0000004 ! independent continuant range: BFO:0000016 ! disposition is_a: RO:0000053 ! has characteristic inverse_of: RO:0000092 ! disposition of [Typedef] id: RO:0000092 name: disposition of def: "inverse of has disposition" [] comment: This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020. subset: RO:0002259 is_a: RO:0000052 ! characteristic of [Typedef] id: RO:0002013 name: has regulatory component activity def: "A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B." [] is_a: RO:0002017 ! has component activity is_a: RO:0002334 ! regulated by created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-05-24T09:30:46Z [Typedef] id: RO:0002014 name: has negative regulatory component activity def: "A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B." [] comment: By convention GO molecular functions are classified by their effector function. Internal regulatory functions are treated as components. For example, NMDA glutmate receptor activity is a cation channel activity with positive regulatory component 'glutamate binding' and negative regulatory components including 'zinc binding' and 'magnesium binding'. is_a: RO:0002013 ! has regulatory component activity is_a: RO:0002335 ! negatively regulated by created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-05-24T09:31:01Z [Typedef] id: RO:0002015 name: has positive regulatory component activity def: "A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B." [] comment: By convention GO molecular functions are classified by their effector function and internal regulatory functions are treated as components. So, for example calmodulin has a protein binding activity that has positive regulatory component activity calcium binding activity. Receptor tyrosine kinase activity is a tyrosine kinase activity that has positive regulatory component 'ligand binding'. is_a: RO:0002013 ! has regulatory component activity is_a: RO:0002336 ! positively regulated by created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-05-24T09:31:17Z [Typedef] id: RO:0002017 name: has component activity comment: A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B. is_a: RO:0002018 ! has component process created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-05-24T09:44:33Z [Typedef] id: RO:0002018 name: has component process def: "w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type." [] domain: BFO:0000015 ! process range: BFO:0000015 ! process is_a: RO:0002180 ! has component created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-05-24T09:49:21Z [Typedef] id: RO:0002022 name: directly regulated by comment: Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. {xref="https://orcid.org/0000-0002-7073-9172"} is_a: RO:0002334 ! regulated by inverse_of: RO:0002578 ! directly regulates created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-09-17T13:52:24Z [Typedef] id: RO:0002023 name: directly negatively regulated by def: "Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1." [https://orcid.org/0000-0002-7073-9172] is_a: RO:0002022 ! directly regulated by inverse_of: RO:0002630 ! directly negatively regulates created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-09-17T13:52:38Z [Typedef] id: RO:0002024 name: directly positively regulated by def: "Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1." [https://orcid.org/0000-0002-7073-9172] is_a: RO:0002022 ! directly regulated by inverse_of: RO:0002629 ! directly positively regulates created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-09-17T13:52:47Z [Typedef] id: RO:0002025 name: has effector activity def: "A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity." [https://orcid.org/0000-0002-7073-9172] comment: This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations. is_functional: true is_a: RO:0002017 ! has component activity created_by: https://orcid.org/0000-0002-7073-9172 creation_date: 2017-09-22T14:14:36Z [Typedef] id: RO:0002086 name: ends after comment: X ends_after Y iff: end(Y) before_or_simultaneous_with end(X) subset: ro-eco property_value: IAO:0000117 "David Osumi-Sutherland" xsd:string is_transitive: true is_a: RO:0002222 ! temporally related to [Typedef] id: RO:0002087 name: immediately preceded by comment: X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y) property_value: IAO:0000117 "David Osumi-Sutherland" xsd:string property_value: IAO:0000118 "starts_at_end_of" xsd:string is_a: preceded_by ! preceded_by inverse_of: RO:0002090 ! immediately precedes [Typedef] id: RO:0002090 name: immediately precedes comment: X immediately_precedes_Y iff: end(X) simultaneous_with start(Y) subset: ro-eco property_value: IAO:0000117 "David Osumi-Sutherland" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-7073-9172 property_value: IAO:0000118 "ends_at_start_of" xsd:string property_value: IAO:0000118 "meets" xsd:string property_value: RO:0002575 BFO:0000063 is_a: precedes ! precedes [Typedef] id: RO:0002131 name: overlaps def: "x overlaps y if and only if there exists some z such that x has part z and z part of y" [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_gocam subset: ro-eco property_value: IAO:0000114 IAO:0000125 property_value: RO:0001900 RO:0001901 holds_over_chain: has_part part_of {RO:0002582="true"} holds_over_chain: has_part part_of {http://purl.obolibrary.org/obo/RO_0002582="true"} holds_over_chain: has_part RO:0002131 holds_over_chain: part_of part_of is_symmetric: true is_a: RO:0002323 ! mereotopologically related to transitive_over: part_of ! part_of expand_expression_to: "http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.obolibrary.org/obo/BFO_0000050 some ?Y)" [] [Typedef] id: RO:0002162 name: in taxon def: "x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed." [] comment: Connects a biological entity to its taxon of origin. subset: ro-eco property_value: IAO:0000114 IAO:0000125 property_value: IAO:0000117 https://orcid.org/0000-0001-9227-417X property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/17921072 property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/20973947 property_value: seeAlso https://github.com/obophenotype/uberon/wiki/Taxon-constraints range: OBI:0100026 ! organism holds_over_chain: develops_from RO:0002162 holds_over_chain: has_part RO:0002162 holds_over_chain: part_of RO:0002162 holds_over_chain: RO:0002215 RO:0002162 holds_over_chain: RO:0002254 RO:0002162 is_a: RO:0002320 ! evolutionarily related to [Typedef] id: RO:0002180 name: has component def: "w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type." [] subset: ro-eco property_value: IAO:0000114 IAO:0000125 property_value: IAO:0000116 "The definition of 'has component' is still under discussion. The challenge is in providing a definition that does not imply transitivity." xsd:string property_value: IAO:0000232 "For use in recording has_part with a cardinality constraint, because OWL does not permit cardinality constraints to be used in combination with transitive object properties. In situations where you would want to say something like 'has part exactly 5 digit, you would instead use has_component exactly 5 digit." xsd:string property_value: RO:0001900 RO:0001901 property_value: seeAlso http://ontologydesignpatterns.org/wiki/Submissions:Componency is_a: has_part ! has part [Typedef] id: RO:0002200 name: has phenotype def: "A relationship that holds between a biological entity and a phenotype. Here a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature). The subject of this relationship can be an organism (where the organism has the phenotype, i.e. the qualities inhere in parts of this organism), a genomic entity such as a gene or genotype (if modifications of the gene or the genotype causes the phenotype), or a condition such as a disease (such that if the condition inheres in an organism, then the organism has the phenotype)." [] subset: ro-eco property_value: IAO:0000114 IAO:0000125 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 range: UPHENO:0001001 ! phenotype is_a: RO:0016001 ! has phenotype or disease inverse_of: RO:0002201 ! phenotype of [Typedef] id: RO:0002201 name: phenotype of def: "inverse of has phenotype" [] subset: ro-eco subset: RO:0002259 property_value: IAO:0000114 IAO:0000125 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_functional: true [Typedef] id: RO:0002203 name: develops into def: "inverse of develops from" [] is_transitive: true is_a: RO:0002286 ! developmentally succeeded by is_a: RO:0002387 ! has potential to develop into is_a: RO:0002388 ! has potential to directly develop into [Typedef] id: RO:0002211 name: regulates def: "p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000117 https://orcid.org/0000-0001-7476-6306 property_value: IAO:0000117 https://orcid.org/0000-0002-3837-8864 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 "GO" xsd:string property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000232 "Regulation precludes parthood; the regulatory process may not be within the regulated process." xsd:string property_value: IAO:0000589 "regulates (processual)" xsd:string property_value: IAO:0000600 "false" xsd:boolean domain: BFO:0000015 ! process range: BFO:0000015 ! process holds_over_chain: RO:0002578 RO:0002578 is_transitive: true is_a: RO:0002411 ! causally upstream of inverse_of: RO:0002334 ! regulated by transitive_over: RO:0002025 ! has effector activity [Typedef] id: RO:0002212 name: negatively regulates def: "p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000589 "negatively regulates (process to process)" xsd:string property_value: RO:0004050 RO:0002211 is_a: RO:0002211 ! regulates is_a: RO:0002305 ! causally upstream of, negative effect inverse_of: RO:0002335 ! negatively regulated by [Typedef] id: RO:0002213 name: positively regulates def: "p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000589 "positively regulates (process to process)" xsd:string property_value: RO:0004049 RO:0002211 holds_over_chain: RO:0002212 RO:0002212 is_transitive: true is_a: RO:0002211 ! regulates is_a: RO:0002304 ! causally upstream of, positive effect inverse_of: RO:0002336 ! positively regulated by [Typedef] id: RO:0002215 name: capable of def: "A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. " [] subset: ro-eco property_value: IAO:0000112 "mechanosensory neuron capable of detection of mechanical stimulus involved in sensory perception (GO:0050974)" xsd:string property_value: IAO:0000112 "osteoclast SubClassOf 'capable of' some 'bone resorption'" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "has function realized in" xsd:string property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/20123131 property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/21208450 property_value: IAO:0000232 "For compatibility with BFO, this relation has a shortcut definition in which the expression \"capable of some P\" expands to \"bearer_of (some realized_by only P)\"." xsd:string domain: BFO:0000004 ! independent continuant range: BFO:0000015 ! process is_a: RO:0002216 ! capable of part of [Typedef] id: RO:0002216 name: capable of part of def: "c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "has function in" xsd:string property_value: seeAlso http://purl.obolibrary.org/obo/ro/docs/reflexivity/ holds_over_chain: RO:0002215 part_of {RO:0002582="true"} holds_over_chain: RO:0002215 part_of {http://purl.obolibrary.org/obo/RO_0002582="true"} is_a: RO:0002328 ! functionally related to is_a: RO:0002500 ! causal agent in process [Typedef] id: RO:0002222 name: temporally related to comment: A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations. subset: ro-eco property_value: http://purl.org/dc/terms/source "https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1" xsd:anyURI property_value: IAO:0000114 IAO:0000125 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 https://en.wikipedia.org/wiki/Allen%27s_interval_algebra property_value: IAO:0000232 "Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends." xsd:string domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent [Typedef] id: RO:0002233 name: has input def: "p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam subset: ro-eco property_value: IAO:0000114 IAO:0000125 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "consumes" xsd:string property_value: seeAlso "https://wiki.geneontology.org/Has_input" xsd:anyURI domain: BFO:0000015 ! process range: BFO:0000040 ! material entity is_a: has_participant ! has participant inverse_of: RO:0002352 ! input of [Typedef] id: RO:0002254 name: has developmental contribution from def: "x has developmental contribution from y iff x has some part z such that z develops from y" [] domain: UBERON:0001062 ! anatomical entity range: UBERON:0001062 ! anatomical entity holds_over_chain: has_part develops_from is_a: developmentally_preceded_by ! developmentally preceded by inverse_of: RO:0002255 ! developmentally contributes to [Typedef] id: RO:0002255 name: developmentally contributes to def: "inverse of has developmental contribution from" [] holds_over_chain: RO:0002203 part_of is_a: RO:0002286 ! developmentally succeeded by is_a: RO:0002385 ! has potential to developmentally contribute to [Typedef] id: RO:0002263 name: acts upstream of def: "c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes." [] subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term property_value: IAO:0000112 "A faulty traffic light (material entity) whose malfunctioning (a process) is causally upstream of a traffic collision (a process): the traffic light acts upstream of the collision." xsd:string property_value: seeAlso http://wiki.geneontology.org/index.php/Acts_upstream_of holds_over_chain: RO:0002327 RO:0002411 is_a: RO:0002264 ! acts upstream of or within [Typedef] id: RO:0002264 name: acts upstream of or within def: "c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process." [] subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term synonym: "affects" RELATED [] property_value: IAO:0000112 "A gene product that has some activity, where that activity may be a part of a pathway or upstream of the pathway." xsd:string property_value: seeAlso "https://wiki.geneontology.org/Acts_upstream_of_or_within" xsd:anyURI holds_over_chain: RO:0002327 RO:0002418 is_a: RO:0002500 ! causal agent in process [Typedef] id: RO:0002286 name: developmentally succeeded by def: "Inverse of developmentally preceded by" [] is_a: RO:0002384 ! has developmental potential involving [Typedef] id: RO:0002304 name: causally upstream of, positive effect def: "p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q." [] comment: holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: http://purl.org/dc/terms/creator https://orcid.org/0000-0002-6601-2165 property_value: RO:0004049 RO:0002411 property_value: seeAlso https://wiki.geneontology.org/Causally_upstream_of,_positive_effect is_a: RO:0002411 ! causally upstream of is_a: RO:0004047 ! causally upstream of or within, positive effect [Typedef] id: RO:0002305 name: causally upstream of, negative effect def: "p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: http://purl.org/dc/terms/creator https://orcid.org/0000-0002-6601-2165 property_value: RO:0004050 RO:0002411 property_value: seeAlso https://wiki.geneontology.org/Causally_upstream_of,_negative_effect is_a: RO:0002411 ! causally upstream of is_a: RO:0004046 ! causally upstream of or within, negative effect [Typedef] id: RO:0002314 name: characteristic of part of def: "q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w." [] property_value: IAO:0000116 "Because part_of is transitive, inheres in is a sub-relation of characteristic of part of" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "inheres in part of" xsd:string property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/20064205 property_value: RO:0001900 RO:0001901 property_value: seeAlso http://purl.obolibrary.org/obo/ro/docs/reflexivity/ holds_over_chain: RO:0000052 part_of {RO:0002582="true"} is_a: RO:0002502 ! depends on transitive_over: part_of ! part_of [Typedef] id: RO:0002320 name: evolutionarily related to def: "A relationship that holds via some environmental process" [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000232 "Do not use this relation directly. It is ended as a grouping for a diverse set of relations, all involving the process of evolution." xsd:string [Typedef] id: RO:0002323 name: mereotopologically related to def: "A mereological relationship or a topological relationship" [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000232 "Do not use this relation directly. It is ended as a grouping for a diverse set of relations, all involving parthood or connectivity relationships" xsd:string property_value: RO:0001900 RO:0001901 [Typedef] id: RO:0002324 name: developmentally related to def: "A relationship that holds between entities participating in some developmental process (GO:0032502)" [] [Typedef] id: RO:0002327 name: enables def: "c enables p iff c is capable of p and c acts to execute p." [] subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term property_value: IAO:0000112 "a particular instances of akt-2 enables some instance of protein kinase activity" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "catalyzes" xsd:string property_value: IAO:0000118 "executes" xsd:string property_value: IAO:0000118 "has" xsd:string property_value: IAO:0000118 "is catalyzing" xsd:string property_value: IAO:0000118 "is executing" xsd:string property_value: IAO:0000232 "This relation differs from the parent relation 'capable of' in that the parent is weaker and only expresses a capability that may not be actually realized, whereas this relation is always realized." xsd:string property_value: seeAlso "https://wiki.geneontology.org/Enables" xsd:anyURI is_a: RO:0002215 ! capable of inverse_of: RO:0002333 ! enabled by transitive_over: has_part ! has part transitive_over: RO:0002017 ! has component activity [Typedef] id: RO:0002328 name: functionally related to def: "A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000232 "This is a grouping relation that collects relations used for the purpose of connecting structure and function" xsd:string [Typedef] id: RO:0002329 name: part of structure that is capable of def: "this relation holds between c and p when c is part of some c', and c' is capable of p." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "false" xsd:boolean holds_over_chain: part_of RO:0002215 {RO:0002581="true"} holds_over_chain: part_of RO:0002215 {http://purl.obolibrary.org/obo/RO_0002581="true"} is_a: RO:0002328 ! functionally related to [Typedef] id: RO:0002331 name: involved in def: "c involved_in p if and only if c enables some process p', and p' is part of p" [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "actively involved in" xsd:string property_value: IAO:0000118 "enables part of" xsd:string property_value: seeAlso "https://wiki.geneontology.org/Involved_in" xsd:anyURI holds_over_chain: RO:0002327 part_of is_a: participates_in ! participates_in is_a: RO:0002431 ! involved in or involved in regulation of transitive_over: part_of ! part_of [Typedef] id: RO:0002333 name: enabled by def: "inverse of enables" [] subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: seeAlso "https://wiki.geneontology.org/Enabled_by" xsd:anyURI is_a: has_participant ! has participant is_a: RO:0002328 ! functionally related to [Typedef] id: RO:0002334 name: regulated by def: "inverse of regulates" [] subset: RO:0002259 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000589 "regulated by (processual)" xsd:string domain: BFO:0000015 ! process range: BFO:0000015 ! process is_transitive: true is_a: RO:0002427 ! causally downstream of or within [Typedef] id: RO:0002335 name: negatively regulated by def: "inverse of negatively regulates" [] subset: RO:0002259 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_a: RO:0002334 ! regulated by [Typedef] id: RO:0002336 name: positively regulated by def: "inverse of positively regulates" [] subset: RO:0002259 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_a: RO:0002334 ! regulated by [Typedef] id: RO:0002352 name: input of def: "inverse of has input" [] subset: ro-eco subset: RO:0002259 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_a: participates_in ! participates_in is_a: RO:0002328 ! functionally related to [Typedef] id: RO:0002384 name: has developmental potential involving def: "x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction)." [] domain: UBERON:0001062 ! anatomical entity range: UBERON:0001062 ! anatomical entity is_a: RO:0002324 ! developmentally related to [Typedef] id: RO:0002385 name: has potential to developmentally contribute to def: "x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y" [] is_a: RO:0002384 ! has developmental potential involving [Typedef] id: RO:0002387 name: has potential to develop into def: "x has the potential to develop into y iff x develops into y or if x is capable of developing into y" [] is_a: RO:0002384 ! has developmental potential involving [Typedef] id: RO:0002388 name: has potential to directly develop into def: "x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y" [] is_a: RO:0002387 ! has potential to develop into [Typedef] id: RO:0002404 name: causally downstream of def: "inverse of upstream of" [] property_value: IAO:0000114 IAO:0000428 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_a: preceded_by ! preceded_by is_a: RO:0002427 ! causally downstream of or within inverse_of: RO:0002411 ! causally upstream of [Typedef] id: RO:0002405 name: immediately causally downstream of property_value: IAO:0000114 IAO:0000428 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_a: RO:0002087 ! immediately preceded by is_a: RO:0002404 ! causally downstream of inverse_of: RO:0002412 ! immediately causally upstream of [Typedef] id: RO:0002407 name: indirectly positively regulates def: "p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "indirectly activates" xsd:string property_value: RO:0002579 RO:0002213 property_value: seeAlso "https://wiki.geneontology.org/Indirectly_positively_regulates" xsd:anyURI holds_over_chain: RO:0002409 RO:0002409 holds_over_chain: RO:0002629 RO:0002407 holds_over_chain: RO:0002629 RO:0002629 is_transitive: true is_a: RO:0002213 ! positively regulates is_a: RO:0012012 ! indirectly regulates transitive_over: RO:0002629 ! directly positively regulates [Typedef] id: RO:0002409 name: indirectly negatively regulates def: "p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "indirectly inhibits" xsd:string property_value: RO:0002579 RO:0002212 property_value: seeAlso "https://wiki.geneontology.org/Indirectly_negatively_regulates" xsd:anyURI holds_over_chain: RO:0002630 RO:0002409 holds_over_chain: RO:0002630 RO:0002630 is_transitive: true is_a: RO:0002212 ! negatively regulates is_a: RO:0012012 ! indirectly regulates transitive_over: RO:0002630 ! directly negatively regulates [Typedef] id: RO:0002410 name: causally related to def: "relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause." [https://en.wikipedia.org/wiki/Causality] property_value: IAO:0000116 "This branch of the ontology deals with causal relations between entities. It is divided into two branches: causal relations between occurrents/processes, and causal relations between material entities. We take an 'activity flow-centric approach', with the former as primary, and define causal relations between material entities in terms of causal relations between occurrents.\n\nTo define causal relations in an activity-flow type network, we make use of 3 primitives:\n\n * Temporal: how do the intervals of the two occurrents relate? \n * Is the causal relation regulatory?\n * Is the influence positive or negative?\n\nThe first of these can be formalized in terms of the Allen Interval Algebra. Informally, the 3 bins we care about are 'direct', 'indirect' or overlapping. Note that all causal relations should be classified under a RO temporal relation (see the branch under 'temporally related to'). Note that all causal relations are temporal, but not all temporal relations are causal. Two occurrents can be related in time without being causally connected. We take causal influence to be primitive, elucidated as being such that has the upstream changed, some qualities of the donwstream would necessarily be modified.\n\nFor the second, we consider a relationship to be regulatory if the system in which the activities occur is capable of altering the relationship to achieve some objective. This could include changing the rate of production of a molecule.\n\nFor the third, we consider the effect of the upstream process on the output(s) of the downstream process. If the level of output is increased, or the rate of production of the output is increased, then the direction is increased. Direction can be positive, negative or neutral or capable of either direction. Two positives in succession yield a positive, two negatives in succession yield a positive, otherwise the default assumption is that the net effect is canceled and the influence is neutral.\n\nEach of these 3 primitives can be composed to yield a cross-product of different relation types." xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000232 "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect." xsd:string [Typedef] id: RO:0002411 name: causally upstream of def: "p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_transitive: true is_a: precedes ! precedes is_a: RO:0002418 ! causally upstream of or within [Typedef] id: RO:0002412 name: immediately causally upstream of def: "p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: RO:0002575 RO:0002411 is_a: RO:0002090 ! immediately precedes is_a: RO:0002411 ! causally upstream of [Typedef] id: RO:0002418 name: causally upstream of or within def: "p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q." [] synonym: "affects" RELATED [] property_value: IAO:0000116 "We would like to make this disjoint with 'preceded by', but this is prohibited in OWL2" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "influences (processual)" xsd:string is_transitive: true is_a: RO:0002501 ! causal relation between processes inverse_of: RO:0002427 ! causally downstream of or within [Typedef] id: RO:0002427 name: causally downstream of or within def: "inverse of causally upstream of or within" [] subset: RO:0002259 property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations is_transitive: true is_a: RO:0002501 ! causal relation between processes [Typedef] id: RO:0002428 name: involved in regulation of def: "c involved in regulation of p if c is involved in some p' and p' regulates some p" [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 holds_over_chain: RO:0002327 RO:0002211 holds_over_chain: RO:0002331 RO:0002211 is_a: RO:0002263 ! acts upstream of is_a: RO:0002431 ! involved in or involved in regulation of [Typedef] id: RO:0002429 name: involved in positive regulation of def: "c involved in regulation of p if c is involved in some p' and p' positively regulates some p" [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: RO:0004049 RO:0002428 holds_over_chain: RO:0002327 RO:0002213 holds_over_chain: RO:0002331 RO:0002213 is_a: RO:0002428 ! involved in regulation of [Typedef] id: RO:0002430 name: involved in negative regulation of def: "c involved in regulation of p if c is involved in some p' and p' negatively regulates some p" [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: RO:0004050 RO:0002428 holds_over_chain: RO:0002327 RO:0002212 holds_over_chain: RO:0002331 RO:0002212 is_a: RO:0002428 ! involved in regulation of [Typedef] id: RO:0002431 name: involved in or involved in regulation of def: "c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p" [] property_value: IAO:0000116 "OWL does not allow defining object properties via a Union" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "involved in or reguates" xsd:string is_a: RO:0002264 ! acts upstream of or within is_a: RO:0002328 ! functionally related to is_a: RO:0002500 ! causal agent in process [Typedef] id: RO:0002432 holds_over_chain: RO:0002327 BFO:0000066 {http://purl.obolibrary.org/obo/RO_0002581="true"} is_a: RO:0002131 ! overlaps is_a: RO:0002328 ! functionally related to [Typedef] id: RO:0002434 name: interacts with def: "A relationship that holds between two entities in which the processes executed by the two entities are causally connected." [] subset: ro-eco synonym: "in pairwise interaction with" EXACT [] property_value: closeMatch "http://purl.obolibrary.org/obo/MI_0914" xsd:anyURI property_value: IAO:0000116 "Considering relabeling as 'pairwise interacts with'" xsd:anyURI property_value: IAO:0000116 "This relation and all sub-relations can be applied to either (1) pairs of entities that are interacting at any moment of time (2) populations or species of entity whose members have the disposition to interact (3) classes whose members have the disposition to interact." xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000232 "Note that this relationship type, and sub-relationship types may be redundant with process terms from other ontologies. For example, the symbiotic relationship hierarchy parallels GO. The relations are provided as a convenient shortcut. Consider using the more expressive processual form to capture your data. In the future, these relations will be linked to their cognate processes through rules." xsd:string property_value: seeAlso "http://purl.obolibrary.org/obo/ro/docs/interaction-relations/" xsd:anyURI domain: BFO:0000040 ! material entity range: BFO:0000040 ! material entity is_symmetric: true [Typedef] id: RO:0002436 name: molecularly interacts with def: "An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other." [] property_value: closeMatch "http://purl.obolibrary.org/obo/MI_0915" xsd:anyURI property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "binds" xsd:string property_value: IAO:0000118 "molecularly binds with" xsd:string property_value: seeAlso ECO:0000353 is_symmetric: true is_a: RO:0002434 ! interacts with [Typedef] id: RO:0002447 name: phosphorylates property_value: IAO:0000116 "Axiomatization to GO to be added later" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "An interaction relation between x and y in which x catalyzes a reaction in which a phosphate group is added to y." xsd:string is_a: RO:0002436 ! molecularly interacts with [Typedef] id: RO:0002448 name: directly regulates activity of def: "The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B.\n\nA and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B." [] synonym: "molecularly controls" EXACT [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000117 https://orcid.org/0000-0003-4639-4431 domain: BFO:0000040 ! material entity range: BFO:0000040 ! material entity is_a: RO:0002436 ! molecularly interacts with is_a: RO:0011002 ! regulates activity of [Typedef] id: RO:0002449 name: directly negatively regulates activity of def: "The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. \nFor example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B." [] synonym: "molecularly decreases activity of" EXACT [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000117 https://orcid.org/0000-0003-4639-4431 property_value: IAO:0000118 "directly inhibits" xsd:string domain: BFO:0000040 ! material entity range: BFO:0000040 ! material entity is_a: RO:0002448 ! directly regulates activity of [Typedef] id: RO:0002450 name: directly positively regulates activity of def: "The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. \nFor example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B." [] synonym: "molecularly increases activity of" EXACT [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000117 https://orcid.org/0000-0003-4639-4431 property_value: IAO:0000118 "directly activates" xsd:string domain: BFO:0000040 ! material entity range: BFO:0000040 ! material entity is_a: RO:0002448 ! directly regulates activity of [Typedef] id: RO:0002452 name: has symptom def: "A relation that holds between a disease or an organism and a phenotype" [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 domain: OGMS:0000031 ! disease is_a: RO:0002200 ! has phenotype [Typedef] id: RO:0002464 name: helper property (not for use in curation) property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000232 "This property or its subproperties is not to be used directly. These properties exist as helper properties that are used to support OWL reasoning." xsd:string [Typedef] id: RO:0002479 domain: BFO:0000003 ! occurrent range: BFO:0000004 ! independent continuant holds_over_chain: has_part BFO:0000066 {http://purl.obolibrary.org/obo/RO_0002581="true"} [Typedef] id: RO:0002481 name: is kinase activity property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_a: RO:0002564 ! molecular interaction relation helper property [Typedef] id: RO:0002500 name: causal agent in process def: "A relationship between a material entity and a process where the material entity has some causal role that influences the process" [] property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations is_a: RO:0002595 ! causal relation between material entity and a process inverse_of: RO:0002608 ! process has causal agent [Typedef] id: RO:0002501 name: causal relation between processes def: "p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000232 "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect." xsd:string domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent is_a: RO:0002410 ! causally related to [Typedef] id: RO:0002502 name: depends on property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: seeAlso BFO:0000169 [Typedef] id: RO:0002506 name: causal relation between entities property_value: IAO:0000116 "The intent is that the process branch of the causal property hierarchy is primary (causal relations hold between occurrents/processes), and that the material branch is defined in terms of the process branch" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000232 "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect." xsd:string domain: BFO:0000002 ! continuant range: BFO:0000002 ! continuant is_a: RO:0002410 ! causally related to [Typedef] id: RO:0002559 name: causally influenced by property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000589 "causally influenced by (entity-centric)" xsd:string is_a: RO:0002506 ! causal relation between entities inverse_of: RO:0002566 ! causally influences [Typedef] id: RO:0002563 name: interaction relation helper property property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: seeAlso http://ontologydesignpatterns.org/wiki/Submissions:N-Ary_Relation_Pattern_%28OWL_2%29 property_value: seeAlso "http://purl.obolibrary.org/obo/ro/docs/interaction-relations/" xsd:anyURI is_a: RO:0002464 ! helper property (not for use in curation) [Typedef] id: RO:0002564 name: molecular interaction relation helper property property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 is_a: RO:0002563 ! interaction relation helper property [Typedef] id: RO:0002566 name: causally influences def: "The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size)." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000117 https://orcid.org/0000-0003-4639-4431 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000589 "causally influences (entity-centric)" xsd:string domain: BFO:0000002 ! continuant range: BFO:0000002 ! continuant is_a: RO:0002506 ! causal relation between entities [Typedef] id: RO:0002578 name: directly regulates def: "p directly regulates q iff p is immediately causally upstream of q and p regulates q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000589 "directly regulates (processual)" xsd:string property_value: RO:0002575 RO:0002211 is_a: RO:0002211 ! regulates is_a: RO:0002412 ! immediately causally upstream of [Typedef] id: RO:0002584 name: has part structure that is capable of def: "s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p" [] property_value: IAO:0000112 "gland SubClassOf 'has part structure that is capable of' some 'secretion by cell'" xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 holds_over_chain: has_part RO:0002215 is_a: RO:0002328 ! functionally related to is_a: RO:0002595 ! causal relation between material entity and a process [Typedef] id: RO:0002595 name: causal relation between material entity and a process def: "A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity." [] property_value: IAO:0000116 "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect." xsd:string property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations domain: BFO:0000040 ! material entity range: BFO:0000015 ! process is_a: RO:0002410 ! causally related to [Typedef] id: RO:0002596 name: capable of regulating def: "Holds between c and p if and only if c is capable of some activity a, and a regulates p." [] property_value: IAO:0000112 "pyrethroid -> growth" xsd:string property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations holds_over_chain: RO:0002215 RO:0002211 is_a: RO:0002500 ! causal agent in process [Typedef] id: RO:0002597 name: capable of negatively regulating def: "Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p." [] property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations holds_over_chain: RO:0002215 RO:0002212 is_a: RO:0002596 ! capable of regulating [Typedef] id: RO:0002598 name: capable of positively regulating def: "Holds between c and p if and only if c is capable of some activity a, and a positively regulates p." [] property_value: IAO:0000112 "renin -> arteriolar smooth muscle contraction" xsd:string property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations holds_over_chain: RO:0002215 RO:0002213 is_a: RO:0002596 ! capable of regulating [Typedef] id: RO:0002608 name: process has causal agent def: "Inverse of 'causal agent in process'" [] property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations is_a: RO:0002410 ! causally related to [Typedef] id: RO:0002610 name: correlated with def: "A relationship that holds between two entities, where the entities exhibit a statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes." [] [Typedef] id: RO:0002629 name: directly positively regulates def: "p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000589 "directly positively regulates (process to process)" xsd:string property_value: RO:0004049 RO:0002578 property_value: seeAlso "https://wiki.geneontology.org/Directly_positively_regulates" xsd:anyURI is_a: RO:0002213 ! positively regulates is_a: RO:0002578 ! directly regulates [Typedef] id: RO:0002630 name: directly negatively regulates def: "p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q." [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam property_value: IAO:0000119 http://purl.obolibrary.org/obo/ro/docs/causal-relations property_value: IAO:0000589 "directly negatively regulates (process to process)" xsd:string property_value: RO:0004050 RO:0002578 property_value: seeAlso "https://wiki.geneontology.org/Directly_negatively_regulates" xsd:anyURI is_a: RO:0002212 ! negatively regulates is_a: RO:0002578 ! directly regulates [Typedef] id: RO:0004017 name: realizable has basis in is_a: RO:0002410 ! causally related to inverse_of: RO:0004018 ! is basis for realizable created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2017-11-05T03:20:01Z [Typedef] id: RO:0004018 name: is basis for realizable is_a: RO:0002410 ! causally related to created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2017-11-05T03:20:29Z [Typedef] id: RO:0004019 name: disease has basis in domain: OGMS:0000031 ! disease is_a: RO:0004017 ! realizable has basis in is_a: RO:0004023 ! causal relationship with disease as subject created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2017-11-05T03:26:47Z [Typedef] id: RO:0004023 name: causal relationship with disease as subject property_value: IAO:0000232 "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all of which have a disease as the subject." xsd:string domain: OGMS:0000031 ! disease is_a: RO:0002410 ! causally related to is_a: RO:0040035 ! disease relationship created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2017-11-05T03:50:54Z [Typedef] id: RO:0004024 name: disease causes disruption of def: "A relationship between a disease and a process where the disease process disrupts the execution of the process." [] property_value: IAO:0000589 "disease causes disruption of (disease to process)" xsd:string domain: OGMS:0000031 ! disease range: BFO:0000015 ! process holds_over_chain: RO:0004025 RO:0002215 is_a: RO:0004023 ! causal relationship with disease as subject transitive_over: part_of ! part_of created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2017-11-05T03:51:09Z [Typedef] id: RO:0004025 name: disease causes dysfunction of property_value: IAO:0000589 "disease causes dysfunction of (disease to anatomical entity)" xsd:string domain: OGMS:0000031 ! disease range: UBERON:0000465 ! material anatomical entity is_a: RO:0004023 ! causal relationship with disease as subject transitive_over: part_of ! part_of created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2017-11-05T03:58:20Z [Typedef] id: RO:0004031 name: enables subfunction def: "Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P." [] holds_over_chain: RO:0002327 has_part is_a: RO:0002328 ! functionally related to created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-01-25T23:20:13Z [Typedef] id: RO:0004032 name: acts upstream of or within, positive effect subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term property_value: RO:0004049 RO:0002264 property_value: seeAlso "https://wiki.geneontology.org/Acts_upstream_of_or_within,_positive_effect" xsd:anyURI holds_over_chain: RO:0002327 RO:0004047 is_a: RO:0002264 ! acts upstream of or within created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-01-26T23:49:30Z [Typedef] id: RO:0004033 name: acts upstream of or within, negative effect subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term property_value: RO:0004050 RO:0002264 property_value: seeAlso "https://wiki.geneontology.org/Acts_upstream_of_or_within,_negative_effect" xsd:anyURI holds_over_chain: RO:0002327 RO:0004046 is_a: RO:0002264 ! acts upstream of or within created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-01-26T23:49:51Z [Typedef] id: RO:0004034 name: acts upstream of, positive effect def: "c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive" [] subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term property_value: RO:0004049 RO:0002263 property_value: seeAlso "https://wiki.geneontology.org/Acts_upstream_of,_positive_effect" xsd:anyURI holds_over_chain: RO:0002327 RO:0002304 is_a: RO:0002263 ! acts upstream of is_a: RO:0004032 ! acts upstream of or within, positive effect created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-01-26T23:53:14Z [Typedef] id: RO:0004035 name: acts upstream of, negative effect def: "c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative" [] subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term property_value: RO:0004050 RO:0002263 property_value: seeAlso "https://wiki.geneontology.org/Acts_upstream_of,_negative_effect" xsd:anyURI holds_over_chain: RO:0002327 RO:0002305 is_a: RO:0002263 ! acts upstream of is_a: RO:0004033 ! acts upstream of or within, negative effect created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-01-26T23:53:22Z [Typedef] id: RO:0004046 name: causally upstream of or within, negative effect property_value: RO:0004050 RO:0002418 property_value: seeAlso "https://wiki.geneontology.org/Causally_upstream_of_or_within,_negative_effect" xsd:anyURI is_a: RO:0002418 ! causally upstream of or within created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-03-13T23:55:05Z [Typedef] id: RO:0004047 name: causally upstream of or within, positive effect property_value: RO:0004049 RO:0002418 property_value: seeAlso https://wiki.geneontology.org/Causally_upstream_of_or_within,_positive_effect is_a: RO:0002418 ! causally upstream of or within created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-03-13T23:55:19Z [Typedef] id: RO:0011002 name: regulates activity of def: "The entity A has an activity that regulates an activity of the entity B. For example, A and B are gene products where the catalytic activity of A regulates the kinase activity of B." [] property_value: IAO:0000117 https://orcid.org/0000-0003-4639-4431 domain: BFO:0000040 ! material entity range: BFO:0000040 ! material entity is_a: RO:0002566 ! causally influences [Typedef] id: RO:0012011 name: indirectly causally upstream of def: "p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q." [] is_a: RO:0002411 ! causally upstream of created_by: https://orcid.org/0000-0003-1813-6857 creation_date: 2022-09-26T06:07:17Z [Typedef] id: RO:0012012 name: indirectly regulates def: "p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q." [] is_a: RO:0002211 ! regulates is_a: RO:0012011 ! indirectly causally upstream of created_by: https://orcid.org/0000-0003-1813-6857 creation_date: 2022-09-26T06:08:01Z [Typedef] id: RO:0014001 name: disease has infectious agent def: "A relationship between a disease and an infectious agent where the material basis of the disease is an infection with some infectious agent." [] is_a: RO:0004019 ! disease has basis in created_by: https://orcid.org/0000-0001-5208-3432 [Typedef] id: RO:0016001 name: has phenotype or disease property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-7463-6306 property_value: http://purl.org/dc/terms/date "2021-11-05T17:30:14Z" xsd:dateTime property_value: IAO:0000232 "Do not use this relation directly. It is intended as a grouping for a set of relations regarding presentation of phenotypes and disease." xsd:string property_value: seeAlso "https://github.com/oborel/obo-relations/issues/478" xsd:string [Typedef] id: RO:0017001 name: device utilizes material def: "X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y." [] synonym: "utilizes" BROAD [] property_value: IAO:0000112 "A diagnostic testing device utilizes a specimen." xsd:string property_value: IAO:0000117 https://orcid.org/0000-0001-9625-1899 property_value: IAO:0000117 https://orcid.org/0000-0003-2620-0345 property_value: IAO:0000232 "A diagnostic testing device utilizes a specimen means that the diagnostic testing device is capable of an assay, and this assay a specimen as its input." xsd:string property_value: IAO:0000232 "See github ticket https://github.com/oborel/obo-relations/issues/497" xsd:string holds_over_chain: RO:0002215 RO:0002233 creation_date: 2021-11-08T12:00:00Z [Typedef] id: RO:0017003 name: positively correlated with def: "A relation between entities in which one increases or decreases as the other does the same." [] is_reflexive: true is_symmetric: true is_a: RO:0002610 ! correlated with [Typedef] id: RO:0019000 name: regulates characteristic def: "A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C." [] property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-8688-6599 domain: BFO:0000015 ! process range: PATO:0000001 ! quality holds_over_chain: RO:0002211 RO:0019000 is_a: RO:0002410 ! causally related to [Typedef] id: RO:0019001 name: positively regulates characteristic def: "A relationship that holds between a process and a characteristic in which process (P) positively regulates characteristic (C) iff: P results in an increase in the intensity or magnitude of C." [] property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-8688-6599 holds_over_chain: RO:0002213 RO:0019001 is_a: RO:0019000 ! regulates characteristic [Typedef] id: RO:0019002 name: negatively regulates characteristic def: "A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C." [] property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-8688-6599 holds_over_chain: RO:0002212 RO:0019001 holds_over_chain: RO:0002213 RO:0019002 is_a: RO:0019000 ! regulates characteristic [Typedef] id: RO:0040035 name: disease relationship def: "This relation groups relations between diseases and any other kind of entity." [] property_value: IAO:0000232 "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, in which the subject or object is a disease." xsd:string created_by: https://orcid.org/0000-0002-6601-2165 creation_date: 2018-09-26T00:00:32Z [Typedef] id: RO:HOM0000000 is_symmetric: true [Typedef] id: developmentally_preceded_by name: developmentally preceded by name: developmentally_preceded_by namespace: plant_ontology def: "Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p" [] def: "X developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p." [RO:0002258] xref: RO:0002258 domain: BFO:0000002 ! continuant range: BFO:0000002 ! continuant is_a: RO:0002324 ! developmentally related to inverse_of: RO:0002286 ! developmentally succeeded by created_by: Laurel_Cooper creation_date: 2013-06-27T13:16:56Z [Typedef] id: develops_from name: develops from name: develops_from namespace: plant_ontology def: "x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y" [] xref: RO:0002202 domain: BFO:0000004 ! independent continuant range: BFO:0000004 ! independent continuant is_transitive: true is_a: developmentally_preceded_by ! developmentally preceded by inverse_of: RO:0002203 ! develops into [Typedef] id: has_part name: has part name: has_part namespace: plant_ontology def: "a core relation that holds between a whole and its part" [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam xref: BFO:0000051 property_value: IAO:0000111 "has part" xsd:string property_value: IAO:0000112 "my body has part my brain (continuant parthood, two material entities)" xsd:string property_value: IAO:0000112 "my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)" xsd:string property_value: IAO:0000112 "this year has part this day (occurrent parthood)" xsd:string property_value: IAO:0000116 "Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part." xsd:string property_value: IAO:0000116 "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/" xsd:string property_value: IAO:0000116 "Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.)\n\nA continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'." xsd:string property_value: IAO:0000118 "has_part" xsd:string property_value: RO:0001900 RO:0001901 is_transitive: true is_a: RO:0002131 ! overlaps [Typedef] id: has_participant name: has participant name: has_participant namespace: plant_ontology def: "a relation between a process and a continuant, in which the continuant is somehow involved in the process" [] xref: RO:0000057 property_value: http://purl.org/dc/terms/source "http://www.obofoundry.org/ro/#OBO_REL:has_participant" xsd:string property_value: IAO:0000111 "has participant" xsd:string property_value: IAO:0000112 "this blood coagulation has participant this blood clot" xsd:string property_value: IAO:0000112 "this investigation has participant this investigator" xsd:string property_value: IAO:0000112 "this process has participant this input material (or this output material)" xsd:string property_value: IAO:0000116 "Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time." xsd:string property_value: IAO:0000118 "has_participant" xsd:string domain: BFO:0000003 ! occurrent range: BFO:0000002 ! continuant holds_over_chain: has_part has_participant [Typedef] id: only_in_taxon name: only in taxon name: only_in_taxon namespace: plant_ontology def: "x only in taxon y if and only if x is in taxon y, and there is no other organism z such that y!=z a and x is in taxon z." [] xref: RO:0002160 is_a: RO:0002162 ! in taxon [Typedef] id: part_of name: part of name: part_of namespace: plant_experimental_conditions_ontology namespace: plant_ontology def: "a core relation that holds between a part and its whole" [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam xref: BFO:0000050 property_value: IAO:0000111 "is part of" xsd:string property_value: IAO:0000112 "my brain is part of my body (continuant parthood, two material entities)" xsd:string property_value: IAO:0000112 "my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)" xsd:string property_value: IAO:0000112 "this day is part of this year (occurrent parthood)" xsd:string property_value: IAO:0000116 "Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other." xsd:string property_value: IAO:0000116 "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/" xsd:string property_value: IAO:0000116 "Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.)\n\nA continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'." xsd:string property_value: IAO:0000118 "part_of" xsd:string property_value: RO:0001900 RO:0001901 property_value: RO:0040042 BFO:0000002 property_value: RO:0040042 BFO:0000003 property_value: RO:0040042 BFO:0000004 property_value: RO:0040042 BFO:0000017 property_value: RO:0040042 BFO:0000019 property_value: RO:0040042 BFO:0000020 property_value: RO:0040042 BFO:0000031 property_value: seeAlso http://ontologydesignpatterns.org/wiki/Community:Parts_and_Collections property_value: seeAlso http://ontologydesignpatterns.org/wiki/Submissions:PartOf property_value: seeAlso "http://www.obofoundry.org/ro/#OBO_REL:part_of" xsd:string property_value: seeAlso "https://wiki.geneontology.org/Part_of" xsd:anyURI is_transitive: true is_a: RO:0002131 ! overlaps inverse_of: has_part ! has part [Typedef] id: participates_in name: participates in name: participates_in namespace: plant_ontology def: "a relation between a continuant and a process, in which the continuant is somehow involved in the process" [] xref: RO:0000056 property_value: IAO:0000111 "participates in" xsd:string property_value: IAO:0000112 "this blood clot participates in this blood coagulation" xsd:string property_value: IAO:0000112 "this input material (or this output material) participates in this process" xsd:string property_value: IAO:0000112 "this investigator participates in this investigation" xsd:string property_value: IAO:0000118 "participates_in" xsd:string domain: BFO:0000002 ! continuant range: BFO:0000003 ! occurrent inverse_of: has_participant ! has participant [Typedef] id: preceded_by name: preceded by name: preceded_by namespace: plant_ontology def: "The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P." [POC:Laurel_Cooper] def: "x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point." [] comment: Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other. subset: ro-eco xref: BFO:0000062 property_value: http://purl.org/dc/terms/source "http://www.obofoundry.org/ro/#OBO_REL:preceded_by" xsd:string property_value: IAO:0000111 "preceded by" xsd:string property_value: IAO:0000116 "An example is: translation preceded_by transcription; aging preceded_by development (not however death preceded_by aging). Where derives_from links classes of continuants, preceded_by links classes of processes. Clearly, however, these two relations are not independent of each other. Thus if cells of type C1 derive_from cells of type C, then any cell division involving an instance of C1 in a given lineage is preceded_by cellular processes involving an instance of C. The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other." xsd:string property_value: IAO:0000118 "is preceded by" xsd:string property_value: IAO:0000118 "preceded_by" xsd:string domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent holds_over_chain: part_of preceded_by is_transitive: true is_a: RO:0002086 ! ends after inverse_of: precedes ! precedes created_by: Laurel_Cooper creation_date: 2013-07-09T14:29:15Z [Typedef] id: precedes name: precedes namespace: plant_ontology def: "x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point." [] subset: ro-eco xref: BFO:0000063 property_value: IAO:0000111 "precedes" xsd:string domain: BFO:0000003 ! occurrent range: BFO:0000003 ! occurrent holds_over_chain: part_of precedes is_transitive: true is_a: RO:0002222 ! temporally related to created_by: Laurel_Cooper creation_date: 2015-06-04T17:18:40Z