pco.owl
type: Ontology
version IRI: pco.owl
creator: Jie Zheng
contributor: David Osumi-Sutherland
comment: The Population and Community Ontology (PCO) is licensed under a Creative Commons zero (CC0) license - http://creativecommons.org/publicdomain/zero/1.0/. You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission. We ask that anyone using this ontology follow the standards of the scientific ontology community by re-using ontology identifiers whenever possible and properly citing the ontology and its creators.
creator: Ramona Walls
creator: David Osumi-Sutherland
default language: en
license: http://creativecommons.org/publicdomain/zero/1.0/

BFO OWL specification label
type: AnnotationProperty
definition: Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification.
curator note: Really of interest to developers only
sub property of: label

BFO CLIF specification label
type: AnnotationProperty
definition: Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2
definition source: Person:Alan Ruttenberg
curator note: Really of interest to developers only
sub property of: label

editor preferred term
type: AnnotationProperty
editor preferred term: editor preferred term
has curation status: ready for release
definition: The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

example of usage
type: AnnotationProperty
editor preferred term: example
has curation status: ready for release
definition: A phrase describing how a class name should be used. May also include other kinds of examples that facilitate immediate understanding of a class semantics, such as widely known prototypical subclasses or instances of the class. Although essential for high level terms, examples for low level terms (e.g., Affymetrix HU133 array) are not
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

in branch
type: AnnotationProperty
editor preferred term: in branch
definition: An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet.
term editor: GROUP:OBI
definition source: OBI_0000277

has curation status
type: AnnotationProperty
editor preferred term: has curation status
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Bill Bug
term editor: PERSON:Melanie Courtot
definition source: OBI_0000281

definition
type: AnnotationProperty
editor preferred term: definition
has curation status: ready for release
definition: The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.
editor note: 2012-04-05: Barry Smith The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible. Can you fix to something like: A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property. Alan Ruttenberg Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. On the specifics of the proposed definition: We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with.
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

editor note
type: AnnotationProperty
editor preferred term: editor note
has curation status: ready for release
definition: An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology.
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obfoundry.org/obo/obi>

term editor
type: AnnotationProperty
editor preferred term: term editor
has curation status: ready for release
definition: Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people
editor note: 20110707, MC: label update to term editor and definition modified accordingly. See http://code.google.com/p/information-artifact-ontology/issues/detail?id=115.
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

alternative term
type: AnnotationProperty
editor preferred term: alternative term
has curation status: pending final vetting
definition: An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent)
term editor: PERSON:Daniel Schober
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

definition source
type: AnnotationProperty
editor preferred term: definition source
has curation status: ready for release
definition: formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007
term editor: PERSON:Daniel Schober
definition source: Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

has obsolescence reason
type: AnnotationProperty
editor preferred term: has obsolescence reason
definition: Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification.
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Melanie Courtot

curator note
type: AnnotationProperty
editor preferred term: curator note
has curation status: ready for release
definition: An administrative note of use for a curator but of no use for a user
term editor: PERSON:Alan Ruttenberg

is denotator type
type: AnnotationProperty
editor preferred term: is denotator type
definition: relates an class defined in an ontology, to the type of it's denotator
editor note: In OWL 2 add AnnotationPropertyRange('is denotator type' 'denotator type')
term editor: Alan Ruttenberg

imported from
type: AnnotationProperty
editor preferred term: imported from
has curation status: pending final vetting
definition: For external terms/classes, the ontology from which the term was imported
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Melanie Courtot
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

expand expression to
type: AnnotationProperty
editor preferred term: expand expression to
example of usage: ObjectProperty: RO_0002104 Label: has plasma membrane part Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.org/obo/owl/GO#GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)"
definition: A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones
term editor: Chris Mungall

expand assertion to
type: AnnotationProperty
editor preferred term: expand assertion to
example of usage: ObjectProperty: RO??? Label: spatially disjoint from Annotations: expand_assertion_to "DisjointClasses: (http://purl.obolibrary.org/obo/BFO_0000051 some ?X) (http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)"
definition: A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom.
term editor: Chris Mungall

first order logic expression
type: AnnotationProperty
editor preferred term: first order logic expression
term editor: PERSON:Alan Ruttenberg

antisymmetric property
type: AnnotationProperty
editor preferred term: antisymmetric property
example of usage: part_of antisymmetric property xsd:true
definition: use boolean value xsd:true to indicate that the property is an antisymmetric property
term editor: Alan Ruttenberg

OBO foundry unique label
type: AnnotationProperty
editor preferred term: OBO foundry unique label
has curation status: pending final vetting
definition: An alternative name for a class or property which is unique across the OBO Foundry.
editor note: The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools .
term editor: PERSON:Alan Ruttenberg
term editor: PERSON:Bjoern Peters
term editor: PERSON:Chris Mungall
term editor: PERSON:Melanie Courtot
definition source: GROUP:OBO Foundry <http://obofoundry.org/>

has ID digit count
type: AnnotationProperty
example of usage: Ontology: <http://purl.obolibrary.org/obo/ro/idrange/> Annotations: 'has ID prefix': "http://purl.obolibrary.org/obo/RO_" 'has ID digit count' : 7, rdfs:label "RO id policy" 'has ID policy for': "RO"
definition: Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix" annotation property value concatenated with an integer in the id range (left padded with "0"s to make this many digits)
term editor: Person:Alan Ruttenberg

has ID range allocated to
type: AnnotationProperty
example of usage: Datatype: idrange:1 Annotations: 'has ID range allocated to': "Chris Mungall" EquivalentTo: xsd:integer[> 2151 , <= 2300]
definition: Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms
term editor: Person:Alan Ruttenberg

has ID policy for
type: AnnotationProperty
example of usage: Ontology: <http://purl.obolibrary.org/obo/ro/idrange/> Annotations: 'has ID prefix': "http://purl.obolibrary.org/obo/RO_" 'has ID digit count' : 7, rdfs:label "RO id policy" 'has ID policy for': "RO"
definition: Relating an ontology used to record id policy to the ontology namespace whose policy it manages
term editor: Person:Alan Ruttenberg

has ID prefix
type: AnnotationProperty
example of usage: Ontology: <http://purl.obolibrary.org/obo/ro/idrange/> Annotations: 'has ID prefix': "http://purl.obolibrary.org/obo/RO_" 'has ID digit count' : 7, rdfs:label "RO id policy" 'has ID policy for': "RO"
definition: Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with "0"s to make this many digits) to construct an ID for a term being created.
term editor: Person:Alan Ruttenberg

elucidation
type: AnnotationProperty
editor preferred term: elucidation
term editor: person:Alan Ruttenberg
definition source: Person:Barry Smith
elucidation: Primitive terms in a highest-level ontology such as BFO are terms which are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms

has associated axiom(nl)
type: AnnotationProperty
editor preferred term: has associated axiom(nl)
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg
elucidation: An axiom associated with a term expressed using natural language

has associated axiom(fol)
type: AnnotationProperty
editor preferred term: has associated axiom(fol)
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg
elucidation: An axiom expressed in first order logic using CLIF syntax

is allocated id range
type: AnnotationProperty
editor preferred term: is allocated id range
definition: Add as annotation triples in the granting ontology
definition: Relates an ontology IRI to an (inclusive) range of IRIs in an OBO name space. The range is give as, e.g. "IAO_0020000-IAO_0020999"
term editor: PERSON:Alan Ruttenberg

has axiom label
type: AnnotationProperty
editor preferred term: has axiom id
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg
elucidation: A URI that is intended to be unique label for an axiom used for tracking change to the ontology. For an axiom expressed in different languages, each expression is given the same URI

term replaced by
type: AnnotationProperty
editor preferred term: term replaced by
has curation status: pending final vetting
definition: Add as annotation triples in the granting ontology
definition: Use on obsolete terms, relating the term to another term that can be used as a substitute
term editor: Person:Alan Ruttenberg
definition source: Person:Alan Ruttenberg

temporal interpretation
type: AnnotationProperty

interacts with
type: AnnotationProperty
range: material entity
type: ObjectProperty
type: SymmetricProperty
domain: material entity
editor note: This relation and all sub-relations can be applied to either (1) pairs of entities that are interacting at any moment of time (2) populations or species of entity whose members have the disposition to interact (3) classes whose members have the disposition to interact.
definition: A relationship that holds between two entities in which the processes executed by the two entities are causally connected.
editor note: Considering relabeling as 'pairwise interacts with'
in_subset: ro-eco
curator note: Note that this relationship type, and sub-relationship types may be redundant with process terms from other ontologies. For example, the symbiotic relationship hierarchy parallels GO. The relations are provided as a convenient shortcut. Consider using the more expressive processual form to capture your data. In the future, these relations will be linked to their cognate processes through rules.
has_exact_synonym: in pairwise interaction with
imported from: ro.owl
term editor: Chris Mungall

biotically interacts with
type: AnnotationProperty
range: material entity
type: ObjectProperty
sub property of: interacts with
type: SymmetricProperty
domain: material entity
imported from: ro.owl
in_subset: ro-eco
alternative term: interacts with on organism level
definition: An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts.
term editor: Chris Mungall

is asymmetric relational form of process class
type: AnnotationProperty
definition: If Rel is the relational form of a process Pr, then it follow that: Rel(x,y) <-> exists p : Pr(p), x subject-partner-in p, y object-partner-in p
sub property of: RO_0002562

is symmetric relational form of process class
type: AnnotationProperty
definition: If Rel is the relational form of a process Pr, then it follow that: Rel(x,y) <-> exists p : Pr(p), x partner-in p, y partner-in p
sub property of: RO_0002562

has_rank
type: AnnotationProperty
definition: A metadata relation between a class and its taxonomic rank (eg species, family)
has_obo_namespace: ncbi_taxonomy
comment: This is an abstract class for use with the NCBI taxonomy to name the depth of the node within the tree. The link between the node term and the rank is only visible if you are using an obo 1.3 aware browser/editor; otherwise this can be ignored

attribute slim
type: AnnotationProperty
comment: Attribute slim
sub property of: subset_property

mpath slim
type: AnnotationProperty
comment: Pathology slim
sub property of: subset_property

scalar slim
type: AnnotationProperty
comment: Scalar slim
sub property of: subset_property

value slim
type: AnnotationProperty
comment: Value slim
sub property of: subset_property

subset_property
type: AnnotationProperty

has_alternative_id
type: AnnotationProperty

has_broad_synonym
type: AnnotationProperty

database_cross_reference
type: AnnotationProperty

has_exact_synonym
type: AnnotationProperty

has_narrow_synonym
type: AnnotationProperty

has_obo_namespace
type: AnnotationProperty

has_related_synonym
type: AnnotationProperty

in_subset
type: AnnotationProperty

shorthand
type: AnnotationProperty

part of
type: ObjectProperty
inverse of: has part
type: TransitiveProperty
editor preferred term: is part of
example of usage: my brain is part of my body (continuant parthood, two material entities)
example of usage: my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)
example of usage: this day is part of this year (occurrent parthood)
definition: a core relation that holds between a part and its whole
editor note: Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other.
editor note: Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime
editor note: Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.) A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'.
alternative term: part_of
temporal interpretation: axiom holds for all times

has part
type: ObjectProperty
type: TransitiveProperty
editor preferred term: has part
example of usage: my body has part my brain (continuant parthood, two material entities)
example of usage: my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)
example of usage: this year has part this day (occurrent parthood)
definition: a core relation that holds between a whole and its part
editor note: Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part.
editor note: Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime
editor note: Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.) A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'.
alternative term: has_part
temporal interpretation: axiom holds for all times

realized in
type: ObjectProperty
inverse of: realizes
domain: realizable entity
range: process
editor preferred term: realized in
example of usage: this disease is realized in this disease course
example of usage: this fragility is realized in this shattering
example of usage: this investigator role is realized in this investigation
alternative term: is realized by
alternative term: realized_in
elucidation: [copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])
comment: Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process

realizes
type: ObjectProperty
domain: process
range: realizable entity
editor preferred term: realizes
example of usage: this disease course realizes this disease
example of usage: this investigation realizes this investigator role
example of usage: this shattering realizes this fragility
elucidation: to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])
comment: Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process

occurs in
type: ObjectProperty
inverse of: contains process
domain: occurrent
range: independent continuant
property chain axiom: part of
editor preferred term: occurs in
definition: b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
alternative term: occurs_in
alternative term: unfolds in
alternative term: unfolds_in
comment: Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant

contains process
type: ObjectProperty
editor preferred term: site of
definition: [copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
comment: Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant

inheres in
type: ObjectProperty
inverse of: bearer of
editor preferred term: inheres in
example of usage: this fragility inheres in this vase
example of usage: this red color inheres in this apple
definition: a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence
editor note: A dependent inheres in its bearer at all times for which the dependent exists.
alternative term: inheres_in
temporal interpretation: axiom holds for all times

bearer of
type: ObjectProperty
range: specifically dependent continuant
editor preferred term: bearer of
example of usage: this apple is bearer of this red color
example of usage: this vase is bearer of this fragility
definition: a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence
editor note: A bearer can have many dependents, and its dependents can exist for different periods of time, but none of its dependents can exist when the bearer does not exist.
alternative term: bearer_of
alternative term: is bearer of
temporal interpretation: axiom holds for all times

participates in
type: ObjectProperty
inverse of: has participant
domain: continuant
range: occurrent
editor preferred term: participates in
example of usage: this blood clot participates in this blood coagulation
example of usage: this input material (or this output material) participates in this process
example of usage: this investigator participates in this investigation
definition: a relation between a continuant and a process, in which the continuant is somehow involved in the process
alternative term: participates_in

has participant
type: ObjectProperty
domain: occurrent
range: continuant
editor preferred term: has participant
example of usage: this blood coagulation has participant this blood clot
example of usage: this investigation has participant this investigator
example of usage: this process has participant this input material (or this output material)
definition: a relation between a process and a continuant, in which the continuant is somehow involved in the process
editor note: Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time.
alternative term: has_participant
source: http://www.obofoundry.org/ro/#OBO_REL:has_participant

is concretized as
type: ObjectProperty
inverse of: concretizes
domain: generically dependent continuant
range: specifically dependent continuant
example of usage: A journal article is an information artifact that inheres in some number of printed journals. For each copy of the printed journal there is some quality that carries the journal article, such as a pattern of ink. The journal article (a generically dependent continuant) is concretized as the quality (a specifically dependent continuant), and both depend on that copy of the printed journal (an independent continuant).
example of usage: An investigator reads a protocol and forms a plan to carry out an assay. The plan is a realizable entity (a specifically dependent continuant) that concretizes the protocol (a generically dependent continuant), and both depend on the investigator (an independent continuant). The plan is then realized by the assay (a process).
definition: A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants.

concretizes
type: ObjectProperty
domain: specifically dependent continuant
range: generically dependent continuant
example of usage: A journal article is an information artifact that inheres in some number of printed journals. For each copy of the printed journal there is some quality that carries the journal article, such as a pattern of ink. The quality (a specifically dependent continuant) concretizes the journal article (a generically dependent continuant), and both depend on that copy of the printed journal (an independent continuant).
example of usage: An investigator reads a protocol and forms a plan to carry out an assay. The plan is a realizable entity (a specifically dependent continuant) that concretizes the protocol (a generically dependent continuant), and both depend on the investigator (an independent continuant). The plan is then realized by the assay (a process).
definition: A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.

function of
type: ObjectProperty
sub property of: inheres in
inverse of: has function
domain: function
example of usage: this catalysis function is a function of this enzyme
definition: a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence
editor note: A function inheres in its bearer at all times for which the function exists, however the function need not be realized at all the times that the function exists.
alternative term: function_of
alternative term: is function of

quality of
type: ObjectProperty
sub property of: inheres in
inverse of: has quality
example of usage: this red color is a quality of this apple
definition: a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence
editor note: A quality inheres in its bearer at all times for which the quality exists.
alternative term: is quality of
alternative term: quality_of

role of
type: ObjectProperty
sub property of: inheres in
inverse of: has role
example of usage: this investigator role is a role of this person
definition: a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence
editor note: A role inheres in its bearer at all times for which the role exists, however the role need not be realized at all the times that the role exists.
alternative term: is role of
alternative term: role_of

has function
type: ObjectProperty
sub property of: bearer of
domain: independent continuant
range: function
example of usage: this enzyme has function this catalysis function (more colloquially: this enzyme has this catalysis function)
definition: a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence
editor note: A bearer can have many functions, and its functions can exist for different periods of time, but none of its functions can exist when the bearer does not exist. A function need not be realized at all the times that the function exists.
alternative term: has_function

has quality
type: ObjectProperty
sub property of: bearer of
range: quality
example of usage: this apple has quality this red color
definition: a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence
editor note: A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist.
alternative term: has_quality

has role
type: ObjectProperty
sub property of: bearer of
domain: independent continuant
range: role
example of usage: this person has role this investigator role (more colloquially: this person has this role of investigator)
definition: a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence
editor note: A bearer can have many roles, and its roles can exist for different periods of time, but none of its roles can exist when the bearer does not exist. A role need not be realized at all the times that the role exists.
alternative term: has_role

has disposition
type: ObjectProperty
sub property of: bearer of
inverse of: disposition of
domain: independent continuant
range: disposition
definition: a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence

disposition of
type: ObjectProperty
sub property of: inheres in

derives from
type: ObjectProperty
inverse of: derives into
example of usage: this cell derives from this parent cell (cell division)
example of usage: this nucleus derives from this parent nucleus (nuclear division)
has curation status: pending final vetting
definition: a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity
editor note: This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops from'.
alternative term: derives_from

derives into
type: ObjectProperty
example of usage: this parent cell derives into this cell (cell division)
example of usage: this parent nucleus derives into this nucleus (nuclear division)
has curation status: pending final vetting
definition: a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity
editor note: This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops into'. To avoid making statements about a future that may not come to pass, it is often better to use the backward-looking 'derives from' rather than the forward-looking 'derives into'.
alternative term: derives_into

location of
type: ObjectProperty
inverse of: located in
type: TransitiveProperty
editor preferred term: is location of
example of usage: my head is the location of my brain
example of usage: this cage is the location of this rat
definition: a relation between two independent continuants, the location and the target, in which the target is entirely within the location
editor note: Most location relations will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime
alternative term: location_of
temporal interpretation: axiom holds for all times

located in
type: ObjectProperty
type: TransitiveProperty
editor preferred term: located in
example of usage: my brain is located in my head
example of usage: this rat is located in this cage
definition: a relation between two independent continuants, the target and the location, in which the target is entirely within the location
editor note: Location as a relation between instances: The primitive instance-level relation c located_in r at t reflects the fact that each continuant is at any given time associated with exactly one spatial region, namely its exact location. Following we can use this relation to define a further instance-level location relation - not between a continuant and the region which it exactly occupies, but rather between one continuant and another. c is located in c1, in this sense, whenever the spatial region occupied by c is part_of the spatial region occupied by c1. Note that this relation comprehends both the relation of exact location between one continuant and another which obtains when r and r1 are identical (for example, when a portion of fluid exactly fills a cavity), as well as those sorts of inexact location relations which obtain, for example, between brain and head or between ovum and uterus
editor note: Most location relations will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime
alternative term: located_in
temporal interpretation: axiom holds for all times
source: http://www.obofoundry.org/ro/#OBO_REL:located_in

2D boundary of
type: ObjectProperty
inverse of: has 2D boundary
example of usage: the surface of my skin is a 2D boundary of my body
definition: a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity
editor note: A 2D boundary may have holes and gaps, but it must be a single connected entity, not an aggregate of several disconnected parts.
editor note: Although the boundary is two-dimensional, it exists in three-dimensional space and thus has a 3D shape.
alternative term: 2D_boundary_of
alternative term: boundary of
alternative term: is 2D boundary of
alternative term: is boundary of
temporal interpretation: axiom holds for all times

has 2D boundary
type: ObjectProperty
domain: material entity
range: immaterial entity
example of usage: my body has 2D boundary the surface of my skin
definition: a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity
editor note: A 2D boundary may have holes and gaps, but it must be a single connected entity, not an aggregate of several disconnected parts.
editor note: Although the boundary is two-dimensional, it exists in three-dimensional space and thus has a 3D shape.
alternative term: has boundary
alternative term: has_2D_boundary
temporal interpretation: axiom holds for all times

parasitoid of
type: ObjectProperty
sub property of: parasite of
inverse of: has parasitoid
definition: A parasite that kills or sterilizes its host
imported from: ro.owl

has parasitoid
type: ObjectProperty
sub property of: parasitized by
imported from: ro.owl

obligate parasite of
type: ObjectProperty
sub property of: parasite of
definition: A sub-relation of parasite-of in which the parasite that cannot complete its life cycle without a host.
imported from: ro.owl

facultative parasite of
type: ObjectProperty
sub property of: parasite of
definition: A sub-relations of parasite-of in which the parasite that can complete its life cycle independent of a host.
imported from: ro.owl

stem parasite of
type: ObjectProperty
sub property of: parasite of
definition: A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)
imported from: ro.owl

root parasite of
type: ObjectProperty
sub property of: parasite of
definition: A parasite-of relationship in which the host is a plant and the parasite that attaches to the host root (PO:0009005)
imported from: ro.owl

hemiparasite of
type: ObjectProperty
sub property of: parasite of
definition: A sub-relation of parasite-of in which the parasite is a plant, and the parasite is parasitic under natural conditions and is also photosynthetic to some degree. Hemiparasites may just obtain water and mineral nutrients from the host plant. Many obtain at least part of their organic nutrients from the host as well.
imported from: ro.owl

member of
type: ObjectProperty
sub property of: part of
inverse of: has member
example of usage: An organism that is a member of a population of organisms
definition: is member of is a mereological relation between a item and a collection.
alternative term: is member of
alternative term: member part of
definition source: SIO
temporal interpretation: axiom holds for all times

has member
type: ObjectProperty
sub property of: has part
type: IrreflexiveProperty
definition: has member is a mereological relation between a collection and an item.
definition source: SIO
temporal interpretation: axiom holds for all times

trophically interacts with
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
definition: An interaction relationship in which the partners are related via a feeding relationship.
term editor: Chris Mungall
imported from: ro.owl
in_subset: ro-eco

preys on
type: ObjectProperty
sub property of: trophically interacts with
inverse of: preyed upon by
example of usage: A wasp killing a Monarch larva in order to feed to offspring [http://www.inaturalist.org/observations/2942824]
example of usage: Baleen whale preys on krill
definition: An interaction relationship involving a predation process, where the subject kills the target in order to eat it or to feed to siblings, offspring or group members
term editor: Chris Mungall
term editor: Jorrit Poelen
term editor: Katja Shulz
alternative term: is subject of predation interaction with
alternative term: preys upon
imported from: ro.owl
in_subset: ro-eco

symbiotically interacts with
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
type: SymmetricProperty
property chain axiom: partner in
property chain axiom: is symbiosis
property chain axiom:
  inverse of: partner in
definition: A biotic interaction in which the two organisms live together in more or less intimate association.
term editor: Chris Mungall
definition source: http://www.ncbi.nlm.nih.gov/pubmed/19278549
curator note: We follow GO and PAMGO in using 'symbiosis' as the broad term encompassing mutualism through parasitism
imported from: ro.owl
is symmetric relational form of process class: symbiosis, encompassing mutualism through parasitism
in_subset: ro-eco

commensually interacts with
type: ObjectProperty
sub property of: symbiotically interacts with
property chain axiom: partner in
property chain axiom: is commensalism
property chain axiom:
  inverse of: partner in
definition: An interaction relationship between two organisms living together in more or less intimate association in a relationship in which one benefits and the other is unaffected (GO).
term editor: Chris Mungall
definition source: http://www.ncbi.nlm.nih.gov/pubmed/19278549
imported from: ro.owl
is symmetric relational form of process class: commensalism
in_subset: ro-eco

mutualistically interacts with
type: ObjectProperty
sub property of: symbiotically interacts with
property chain axiom: partner in
property chain axiom: is mutualism
property chain axiom:
  inverse of: partner in
definition: An interaction relationship between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other (GO).
term editor: Chris Mungall
definition source: http://www.ncbi.nlm.nih.gov/pubmed/19278549
imported from: ro.owl
is symmetric relational form of process class: mutualism
in_subset: ro-eco

interacts with via parasite-host interaction
type: ObjectProperty
sub property of: symbiotically interacts with
property chain axiom: partner in
property chain axiom: is parasitism
property chain axiom:
  inverse of: partner in
definition: An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).
term editor: Chris Mungall
definition source: http://www.ncbi.nlm.nih.gov/pubmed/19278549
curator note: This relation groups a pair of inverse relations, parasite of and parasitized by
imported from: ro.owl
is symmetric relational form of process class: parasitism
in_subset: ro-eco

parasite of
type: ObjectProperty
sub property of: interacts with via parasite-host interaction
sub property of: has host
inverse of: parasitized by
property chain axiom: subject participant in
property chain axiom: is parasitism
property chain axiom:
  inverse of: target participant in
example of usage: Pediculus humanus capitis parasite of human
term editor: Chris Mungall
alternative term: parasitizes
imported from: ro.owl
is asymmetric relational form of process class: parasitism
has_exact_synonym: direct parasite of
in_subset: ro-eco

parasitized by
type: ObjectProperty
sub property of: interacts with via parasite-host interaction
sub property of: host of
term editor: Chris Mungall
alternative term: has parasite
alternative term: parasitised by
imported from: ro.owl
has_exact_synonym: directly parasitized by
in_subset: ro-eco

participates in a abiotic-biotic interaction with
type: ObjectProperty
sub property of: biotically interacts with
example of usage: Porifiera attaches to substrate
definition: A biotic interaction relationship in which one partner is an organism and the other partner is inorganic. For example, the relationship between a sponge and the substrate to which is it anchored.
term editor: Chris Mungall
imported from: ro.owl
has_related_synonym: semibiotically interacts with
in_subset: ro-eco

host of
type: ObjectProperty
sub property of: symbiotically interacts with
term editor: Chris Mungall
curator note: The term host is usually used for the larger (macro) of the two members of a symbiosis (GO)
imported from: ro.owl
in_subset: ro-eco

has host
type: ObjectProperty
sub property of: symbiotically interacts with
term editor: Chris Mungall
imported from: ro.owl
in_subset: ro-eco

pollinates
type: ObjectProperty
sub property of: mutualistically interacts with
inverse of: pollinated by
example of usage: Bees pollinate Flowers
editor note: This relation is intended to be used for biotic pollination - e.g. a bee pollinating a flowering plant. Some kinds of pollination may be semibiotic - e.g. wind can have the role of pollinator. We would use a separate relation for this.
term editor: Chris Mungall
alternative term: is subject of pollination interaction with
imported from: ro.owl
in_subset: ro-eco

pollinated by
type: ObjectProperty
sub property of: mutualistically interacts with
term editor: Chris Mungall
alternative term: has polinator
alternative term: is target of pollination interaction with
imported from: ro.owl
in_subset: ro-eco

acquires nutrients from
type: ObjectProperty
sub property of: trophically interacts with
inverse of: provides nutrients for
term editor: Chris Mungall
curator note: Intended to be used when the target of the relation is not itself consumed, and does not have integral parts consumed, but provided nutrients in some other fashion.
imported from: ro.owl
in_subset: ro-eco

preyed upon by
type: ObjectProperty
sub property of: trophically interacts with
term editor: Chris Mungall
alternative term: has predator
alternative term: is target of predation interaction with
imported from: ro.owl
in_subset: ro-eco

is vector for
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
inverse of: has vector
example of usage: Anopheles is a vector for Plasmodium
term editor: Chris Mungall
definition source: a is a vector for b if a carries and transmits an infectious pathogen b into another living organism
imported from: ro.owl
in_subset: ro-eco

has vector
type: ObjectProperty
sub property of: is vector for
term editor: Chris Mungall
imported from: ro.owl
in_subset: ro-eco

partner in
type: ObjectProperty
sub property of: participates in
term editor: Chris Mungall
curator note: Experimental: relation used for defining interaction relations. An interaction relation holds when there is an interaction event with two partners. In a directional interaction, one partner is deemed the subject, the other the target
imported from: ro.owl

subject participant in
type: ObjectProperty
sub property of: partner in
term editor: Chris Mungall
curator note: Experimental: relation used for defining interaction relations; the meaning of s 'subject participant in' p is determined by the type of p, where p must be a directional interaction process. For example, in a predator-prey interaction process the subject is the predator. We can imagine a reciprocal prey-predatory process with subject and object reversed.
imported from: ro.owl

target participant in
type: ObjectProperty
sub property of: partner in
term editor: Chris Mungall
curator note: Experimental: relation used for defining interaction relations; the meaning of s 'target participant in' p is determined by the type of p, where p must be a directional interaction process. For example, in a predator-prey interaction process the target is the prey. We can imagine a reciprocal prey-predatory process with subject and object reversed.
imported from: ro.owl

helper property
type: ObjectProperty
has curation status: requires discussion
term editor: Chris Mungall
curator note: This property or its subproperties is not to be used directly. These properties exist as helper properties that are used to support OWL reasoning.
imported from: ro.owl

is symbiosis
type: ObjectProperty
sub property of: interaction relation helper property
term editor: Chris Mungall
imported from: ro.owl

is commensalism
type: ObjectProperty
sub property of: is symbiosis
term editor: Chris Mungall
imported from: ro.owl

is mutualism
type: ObjectProperty
sub property of: is symbiosis
term editor: Chris Mungall
imported from: ro.owl

is parasitism
type: ObjectProperty
sub property of: is symbiosis
term editor: Chris Mungall
imported from: ro.owl

provides nutrients for
type: ObjectProperty
sub property of: trophically interacts with
term editor: Chris Mungall
imported from: ro.owl
in_subset: ro-eco

eats
type: ObjectProperty
sub property of: trophically interacts with
term editor: Chris Mungall
alternative term: is subject of eating interaction with
imported from: ro.owl
in_subset: ro-eco

is eaten by
type: ObjectProperty
sub property of: trophically interacts with
term editor: Chris Mungall
alternative term: eaten by
alternative term: is target of eating interaction with
imported from: ro.owl
in_subset: ro-eco

hyperparasite of
type: ObjectProperty
sub property of: has host
inverse of: hyperparasitized by
property chain axiom: parasite of
definition: x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y
editor note: Note that parasite-of is a diret relationship, so hyperparasite-of is not considered a sub-relation, even though hyperparasitism can be considered a form of parasitism
term editor: Chris Mungall
definition source: http://eol.org/schema/terms/hyperparasitoidOf
definition source: https://en.wikipedia.org/wiki/Hyperparasite
imported from: ro.owl
has_related_synonym: epiparasite of
has_related_synonym: hyperparasitoid of
in_subset: ro-eco

hyperparasitized by
type: ObjectProperty
sub property of: host of
property chain axiom: parasitized by
term editor: Chris Mungall
imported from: ro.owl
has_related_synonym: has epiparasite
has_related_synonym: has hyperparasite
has_related_synonym: hyperparasitoidized by
in_subset: ro-eco

allelopath of
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
term editor: Chris Mungall
definition source: http://en.wikipedia.org/wiki/Allelopathy
imported from: ro.owl
in_subset: ro-eco
see also: x is an allelopath of y iff xis an organism produces one or more biochemicals that influence the growth, survival, and reproduction of y

pathogen of
type: ObjectProperty
sub property of: has host
inverse of: has pathogen
term editor: Chris Mungall
imported from: ro.owl
in_subset: ro-eco

has pathogen
type: ObjectProperty
sub property of: host of
term editor: Chris Mungall
imported from: ro.owl
in_subset: ro-eco

interaction relation helper property
type: ObjectProperty
sub property of: helper property
term editor: Chris Mungall
imported from: ro.owl

participates in a biotic-biotic interaction with
type: ObjectProperty
sub property of: biotically interacts with
term editor: Chris Mungall
imported from: ro.owl
in_subset: ro-eco

visits
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
inverse of: visited by
imported from: ro.owl

visited by
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
imported from: ro.owl

visits flowers of
type: ObjectProperty
sub property of: visits
inverse of: has flowers visited by
imported from: ro.owl

has flowers visited by
type: ObjectProperty
sub property of: visited by
imported from: ro.owl

lays eggs in
type: ObjectProperty
sub property of: parasite of
sub property of: visits
inverse of: has eggs laid in by
imported from: ro.owl

has eggs laid in by
type: ObjectProperty
sub property of: parasitized by
sub property of: visited by
imported from: ro.owl

kills
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
inverse of: is killed by
definition source: https://github.com/jhpoelen/eol-globi-data/issues/143
imported from: ro.owl

is killed by
type: ObjectProperty
sub property of: participates in a biotic-biotic interaction with
imported from: ro.owl

ectoparasite of
type: ObjectProperty
sub property of: parasite of
inverse of: has ectoparasite
definition: A sub-relation of parasite-of in which the parasite lives on or in the integumental system of the host
definition source: Types
imported from: ro.owl

has ectoparasite
type: ObjectProperty
sub property of: parasitized by
imported from: ro.owl

endoparasite of
type: ObjectProperty
sub property of: parasite of
inverse of: has endoparasite
definition source: Types
definition source: A sub-relation of parasite-of in which the parasite lives inside the host, beneath the integumental system
imported from: ro.owl
has_related_synonym: lives inside of

has endoparasite
type: ObjectProperty
sub property of: parasitized by
imported from: ro.owl

mesoparasite of
type: ObjectProperty
sub property of: parasite of
inverse of: has mesoparasite
definition: A sub-relation of parasite-of in which the parasite is partially an endoparasite and partially an ectoparasite
imported from: ro.owl

has mesoparasite
type: ObjectProperty
sub property of: parasitized by
imported from: ro.owl

intercellular endoparasite of
type: ObjectProperty
sub property of: endoparasite of
inverse of: has intercellular endoparasite
definition: A sub-relation of endoparasite-of in which the parasite inhabits the spaces between host cells.
definition source: Types
imported from: ro.owl

has intercellular endoparasite
type: ObjectProperty
sub property of: has endoparasite
imported from: ro.owl

intracellular endoparasite of
type: ObjectProperty
sub property of: endoparasite of
inverse of: has intracellular endoparasite
definition: A sub-relation of endoparasite-of in which the parasite inhabits host cells.
definition source: Types
imported from: ro.owl

has intracellular endoparasite
type: ObjectProperty
sub property of: has endoparasite
imported from: ro.owl

entity
type: Class
BFO OWL specification label: entity
BFO CLIF specification label: Entity
example of usage: Julius Caesar
example of usage: Verdi’s Requiem
example of usage: the Second World War
example of usage: your body mass index
editor note: BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81
editor note: Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf
elucidation: An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])

Axiom
annotated source: entity
annotated property: editor note
annotated target: Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000004
comment: per discussion with Barry Smith

Axiom
annotated source: entity
annotated property: elucidation
annotated target: An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/001-001

continuant
type: Class
subclass of: entity
disjoint with: occurrent
BFO OWL specification label: continuant
BFO CLIF specification label: Continuant
definition: An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts.
editor note: BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240
editor note: Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants
elucidation: A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])
has associated axiom(nl): if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])
has associated axiom(nl): if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])
has associated axiom(nl): if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])
has associated axiom(fol): (forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002]
has associated axiom(fol): (forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001]
has associated axiom(fol): (forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002]
has associated axiom(fol): (forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002]

Axiom
annotated source: continuant
annotated property: editor note
annotated target: Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000007

Axiom
annotated source: continuant
annotated property: elucidation
annotated target: A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/008-002

Axiom
annotated source: continuant
annotated property: has associated axiom(nl)
annotated target: if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/126-001

Axiom
annotated source: continuant
annotated property: has associated axiom(nl)
annotated target: if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/009-002

Axiom
annotated source: continuant
annotated property: has associated axiom(nl)
annotated target: if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/011-002

Axiom
annotated source: continuant
annotated property: has associated axiom(fol)
annotated target: (forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/009-002

Axiom
annotated source: continuant
annotated property: has associated axiom(fol)
annotated target: (forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/126-001

Axiom
annotated source: continuant
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/008-002

Axiom
annotated source: continuant
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/011-002

occurrent
type: Class
subclass of: entity
BFO OWL specification label: occurrent
BFO CLIF specification label: Occurrent
definition: An entity that has temporal parts and that happens, unfolds or develops through time.
editor note: BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region
editor note: BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players.
editor note: Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process.
editor note: Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame.
elucidation: An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])
has associated axiom(nl): Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])
has associated axiom(nl): b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])
has associated axiom(fol): (forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001]
has associated axiom(fol): (forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001]

Axiom
annotated source: occurrent
annotated property: editor note
annotated target: Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process.
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000006
comment: per discussion with Barry Smith

Axiom
annotated source: occurrent
annotated property: editor note
annotated target: Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame.
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000012

Axiom
annotated source: occurrent
annotated property: elucidation
annotated target: An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/077-002

Axiom
annotated source: occurrent
annotated property: has associated axiom(nl)
annotated target: Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/108-001

Axiom
annotated source: occurrent
annotated property: has associated axiom(nl)
annotated target: b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/079-001

Axiom
annotated source: occurrent
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/108-001

Axiom
annotated source: occurrent
annotated property: has associated axiom(fol)
annotated target: (forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/079-001

independent continuant
type: Class
subclass of: continuant
disjoint with: specifically dependent continuant
disjoint with: generically dependent continuant
BFO OWL specification label: ic
BFO CLIF specification label: IndependentContinuant
example of usage: a chair
example of usage: a heart
example of usage: a leg
example of usage: a molecule
example of usage: a spatial region
example of usage: an atom
example of usage: an orchestra.
example of usage: an organism
example of usage: the bottom right portion of a human torso
example of usage: the interior of your mouth
definition: A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything.
definition: b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])
has associated axiom(nl): For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])
has associated axiom(nl): For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])
has associated axiom(fol): (forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001]
has associated axiom(fol): (forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002]
has associated axiom(fol): (iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002]

Axiom
annotated source: independent continuant
annotated property: definition
annotated target: b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/017-002

Axiom
annotated source: independent continuant
annotated property: has associated axiom(nl)
annotated target: For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/134-001

Axiom
annotated source: independent continuant
annotated property: has associated axiom(nl)
annotated target: For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/018-002

Axiom
annotated source: independent continuant
annotated property: has associated axiom(fol)
annotated target: (forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/134-001

Axiom
annotated source: independent continuant
annotated property: has associated axiom(fol)
annotated target: (forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/018-002

Axiom
annotated source: independent continuant
annotated property: has associated axiom(fol)
annotated target: (iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/017-002

obsolete dependent continuant
type: Class
subclass of: Obsolete Class
definition: A continuant that is either dependent on one or other independent continuant bearers or inheres in or is borne by other entities.
deprecated: true

spatial region
type: Class
subclass of: immaterial entity
disjoint with: site
disjoint with: continuant fiat boundary
BFO OWL specification label: s-region
BFO CLIF specification label: SpatialRegion
editor note: BFO 2 Reference: Spatial regions do not participate in processes.
editor note: Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional.
elucidation: A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001])
has associated axiom(nl): All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001])
has associated axiom(fol): (forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001]
has associated axiom(fol): (forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001]

Axiom
annotated source: spatial region
annotated property: editor note
annotated target: Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional.
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000002
comment: per discussion with Barry Smith

Axiom
annotated source: spatial region
annotated property: elucidation
annotated target: A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/035-001

Axiom
annotated source: spatial region
annotated property: has associated axiom(nl)
annotated target: All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/036-001

Axiom
annotated source: spatial region
annotated property: has associated axiom(fol)
annotated target: (forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/036-001

Axiom
annotated source: spatial region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/035-001

temporal region
type: Class
subclass of: occurrent
disjoint with: spatiotemporal region
disjoint with: process
disjoint with: process boundary
BFO OWL specification label: t-region
BFO CLIF specification label: TemporalRegion
editor note: Temporal region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the mereological sum of a temporal instant and a temporal interval that doesn't overlap the instant. In this case the resultant temporal region is neither 0-dimensional nor 1-dimensional
elucidation: A temporal region is an occurrent entity that is part of time as defined relative to some reference frame. (axiom label in BFO2 Reference: [100-001])
has associated axiom(nl): All parts of temporal regions are temporal regions. (axiom label in BFO2 Reference: [101-001])
has associated axiom(nl): Every temporal region t is such that t occupies_temporal_region t. (axiom label in BFO2 Reference: [119-002])
has associated axiom(fol): (forall (r) (if (TemporalRegion r) (occupiesTemporalRegion r r))) // axiom label in BFO2 CLIF: [119-002]
has associated axiom(fol): (forall (x y) (if (and (TemporalRegion x) (occurrentPartOf y x)) (TemporalRegion y))) // axiom label in BFO2 CLIF: [101-001]
has associated axiom(fol): (forall (x) (if (TemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [100-001]

Axiom
annotated source: temporal region
annotated property: editor note
annotated target: Temporal region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the mereological sum of a temporal instant and a temporal interval that doesn't overlap the instant. In this case the resultant temporal region is neither 0-dimensional nor 1-dimensional
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000003
comment: per discussion with Barry Smith

Axiom
annotated source: temporal region
annotated property: elucidation
annotated target: A temporal region is an occurrent entity that is part of time as defined relative to some reference frame. (axiom label in BFO2 Reference: [100-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/100-001

Axiom
annotated source: temporal region
annotated property: has associated axiom(nl)
annotated target: All parts of temporal regions are temporal regions. (axiom label in BFO2 Reference: [101-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/101-001

Axiom
annotated source: temporal region
annotated property: has associated axiom(nl)
annotated target: Every temporal region t is such that t occupies_temporal_region t. (axiom label in BFO2 Reference: [119-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/119-002

Axiom
annotated source: temporal region
annotated property: has associated axiom(fol)
annotated target: (forall (r) (if (TemporalRegion r) (occupiesTemporalRegion r r))) // axiom label in BFO2 CLIF: [119-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/119-002

Axiom
annotated source: temporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x y) (if (and (TemporalRegion x) (occurrentPartOf y x)) (TemporalRegion y))) // axiom label in BFO2 CLIF: [101-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/101-001

Axiom
annotated source: temporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (TemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [100-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/100-001

two-dimensional spatial region
type: Class
subclass of: spatial region
disjoint with: three-dimensional spatial region
BFO OWL specification label: 2d-s-region
BFO CLIF specification label: TwoDimensionalSpatialRegion
example of usage: an infinitely thin plane in space.
example of usage: the surface of a sphere-shaped part of space
elucidation: A two-dimensional spatial region is a spatial region that is of two dimensions. (axiom label in BFO2 Reference: [039-001])
has associated axiom(fol): (forall (x) (if (TwoDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [039-001]

Axiom
annotated source: two-dimensional spatial region
annotated property: elucidation
annotated target: A two-dimensional spatial region is a spatial region that is of two dimensions. (axiom label in BFO2 Reference: [039-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/039-001

Axiom
annotated source: two-dimensional spatial region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (TwoDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [039-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/039-001

spatiotemporal region
type: Class
subclass of: occurrent
BFO OWL specification label: st-region
BFO CLIF specification label: SpatiotemporalRegion
example of usage: the spatiotemporal region occupied by a human life
example of usage: the spatiotemporal region occupied by a process of cellular meiosis.
example of usage: the spatiotemporal region occupied by the development of a cancer tumor
elucidation: A spatiotemporal region is an occurrent entity that is part of spacetime. (axiom label in BFO2 Reference: [095-001])
has associated axiom(nl): All parts of spatiotemporal regions are spatiotemporal regions. (axiom label in BFO2 Reference: [096-001])
has associated axiom(nl): Each spatiotemporal region at any time t projects_onto some spatial region at t. (axiom label in BFO2 Reference: [099-001])
has associated axiom(nl): Each spatiotemporal region projects_onto some temporal region. (axiom label in BFO2 Reference: [098-001])
has associated axiom(nl): Every spatiotemporal region occupies_spatiotemporal_region itself.
has associated axiom(nl): Every spatiotemporal region s is such that s occupies_spatiotemporal_region s. (axiom label in BFO2 Reference: [107-002])
has associated axiom(fol): (forall (r) (if (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion r r))) // axiom label in BFO2 CLIF: [107-002]
has associated axiom(fol): (forall (x t) (if (SpatioTemporalRegion x) (exists (y) (and (SpatialRegion y) (spatiallyProjectsOntoAt x y t))))) // axiom label in BFO2 CLIF: [099-001]
has associated axiom(fol): (forall (x y) (if (and (SpatioTemporalRegion x) (occurrentPartOf y x)) (SpatioTemporalRegion y))) // axiom label in BFO2 CLIF: [096-001]
has associated axiom(fol): (forall (x) (if (SpatioTemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [095-001]
has associated axiom(fol): (forall (x) (if (SpatioTemporalRegion x) (exists (y) (and (TemporalRegion y) (temporallyProjectsOnto x y))))) // axiom label in BFO2 CLIF: [098-001]

Axiom
annotated source: spatiotemporal region
annotated property: elucidation
annotated target: A spatiotemporal region is an occurrent entity that is part of spacetime. (axiom label in BFO2 Reference: [095-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/095-001

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(nl)
annotated target: All parts of spatiotemporal regions are spatiotemporal regions. (axiom label in BFO2 Reference: [096-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/096-001

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(nl)
annotated target: Each spatiotemporal region at any time t projects_onto some spatial region at t. (axiom label in BFO2 Reference: [099-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/099-001

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(nl)
annotated target: Each spatiotemporal region projects_onto some temporal region. (axiom label in BFO2 Reference: [098-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/098-001

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(nl)
annotated target: Every spatiotemporal region s is such that s occupies_spatiotemporal_region s. (axiom label in BFO2 Reference: [107-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/107-002

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(fol)
annotated target: (forall (r) (if (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion r r))) // axiom label in BFO2 CLIF: [107-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/107-002

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x t) (if (SpatioTemporalRegion x) (exists (y) (and (SpatialRegion y) (spatiallyProjectsOntoAt x y t))))) // axiom label in BFO2 CLIF: [099-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/099-001

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x y) (if (and (SpatioTemporalRegion x) (occurrentPartOf y x)) (SpatioTemporalRegion y))) // axiom label in BFO2 CLIF: [096-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/096-001

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (SpatioTemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [095-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/095-001

Axiom
annotated source: spatiotemporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (SpatioTemporalRegion x) (exists (y) (and (TemporalRegion y) (temporallyProjectsOnto x y))))) // axiom label in BFO2 CLIF: [098-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/098-001

process
type: Class
subclass of: occurrent
BFO OWL specification label: process
BFO CLIF specification label: Process
example of usage: a process of cell-division, \ a beating of the heart
example of usage: a process of meiosis
example of usage: a process of sleeping
example of usage: the course of a disease
example of usage: the flight of a bird
example of usage: the life of an organism
example of usage: your process of aging.
definition: An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.
definition: p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])
editor note: BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war)
has associated axiom(fol): (iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003]

Axiom
annotated source: process
annotated property: definition
annotated target: p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/083-003

Axiom
annotated source: process
annotated property: has associated axiom(fol)
annotated target: (iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/083-003

disposition
type: Class
subclass of: realizable entity
disjoint with: role
BFO OWL specification label: disposition
BFO CLIF specification label: Disposition
example of usage: an atom of element X has the disposition to decay to an atom of element Y
example of usage: certain people have a predisposition to colon cancer
example of usage: children are innately disposed to categorize objects in certain ways.
example of usage: the cell wall is disposed to filter chemicals in endocytosis and exocytosis
editor note: BFO 2 Reference: Dispositions exist along a strength continuum. Weaker forms of disposition are realized in only a fraction of triggering cases. These forms occur in a significant number of cases of a similar type.
elucidation: b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])
has associated axiom(nl): If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002])
has associated axiom(fol): (forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002]
has associated axiom(fol): (forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002]

Axiom
annotated source: disposition
annotated property: elucidation
annotated target: b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/062-002

Axiom
annotated source: disposition
annotated property: has associated axiom(nl)
annotated target: If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/063-002

Axiom
annotated source: disposition
annotated property: has associated axiom(fol)
annotated target: (forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/063-002

Axiom
annotated source: disposition
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/062-002

realizable entity
type: Class
subclass of: specifically dependent continuant
disjoint with: quality
BFO OWL specification label: realizable
BFO CLIF specification label: RealizableEntity
example of usage: the disposition of this piece of metal to conduct electricity.
example of usage: the disposition of your blood to coagulate
example of usage: the function of your reproductive organs
example of usage: the role of being a doctor
example of usage: the role of this boundary to delineate where Utah and Colorado meet
definition: A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances.
elucidation: To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])
has associated axiom(nl): All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])
has associated axiom(fol): (forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002]
has associated axiom(fol): (forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002]

Axiom
annotated source: realizable entity
annotated property: elucidation
annotated target: To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/058-002

Axiom
annotated source: realizable entity
annotated property: has associated axiom(nl)
annotated target: All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/060-002

Axiom
annotated source: realizable entity
annotated property: has associated axiom(fol)
annotated target: (forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/060-002

Axiom
annotated source: realizable entity
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/058-002

zero-dimensional spatial region
type: Class
subclass of: spatial region
disjoint with: three-dimensional spatial region
BFO OWL specification label: 0d-s-region
BFO CLIF specification label: ZeroDimensionalSpatialRegion
elucidation: A zero-dimensional spatial region is a point in space. (axiom label in BFO2 Reference: [037-001])
has associated axiom(fol): (forall (x) (if (ZeroDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [037-001]

Axiom
annotated source: zero-dimensional spatial region
annotated property: elucidation
annotated target: A zero-dimensional spatial region is a point in space. (axiom label in BFO2 Reference: [037-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/037-001

Axiom
annotated source: zero-dimensional spatial region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (ZeroDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [037-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/037-001

quality
type: Class
subclass of: specifically dependent continuant
BFO OWL specification label: quality
BFO CLIF specification label: Quality
example of usage: the ambient temperature of this portion of air
example of usage: the color of a tomato
example of usage: the length of the circumference of your waist
example of usage: the mass of this piece of gold.
example of usage: the shape of your nose
example of usage: the shape of your nostril
elucidation: a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])
has associated axiom(nl): If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])
has associated axiom(fol): (forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001]
has associated axiom(fol): (forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001]

Axiom
annotated source: quality
annotated property: elucidation
annotated target: a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/055-001

Axiom
annotated source: quality
annotated property: has associated axiom(nl)
annotated target: If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/105-001

Axiom
annotated source: quality
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/055-001

Axiom
annotated source: quality
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/105-001

specifically dependent continuant
type: Class
subclass of: continuant
disjoint with: generically dependent continuant
BFO OWL specification label: sdc
BFO CLIF specification label: SpecificallyDependentContinuant
example of usage: Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key
example of usage: of one-sided specifically dependent continuants: the mass of this tomato
example of usage: of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates.
example of usage: the disposition of this fish to decay
example of usage: the function of this heart: to pump blood
example of usage: the mutual dependence of proton donors and acceptors in chemical reactions [79
example of usage: the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction
example of usage: the pink color of a medium rare piece of grilled filet mignon at its center
example of usage: the role of being a doctor
example of usage: the shape of this hole.
example of usage: the smell of this portion of mozzarella
definition: A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.
definition: b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])
editor note: Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc.
has associated axiom(fol): (iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003]

Axiom
annotated source: specifically dependent continuant
annotated property: definition
annotated target: b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/050-003

Axiom
annotated source: specifically dependent continuant
annotated property: editor note
annotated target: Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc.
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000005
comment: per discussion with Barry Smith

Axiom
annotated source: specifically dependent continuant
annotated property: has associated axiom(fol)
annotated target: (iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/050-003

role
type: Class
subclass of: realizable entity
BFO OWL specification label: role
BFO CLIF specification label: Role
example of usage: John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married.
example of usage: the priest role
example of usage: the role of a boundary to demarcate two neighboring administrative territories
example of usage: the role of a building in serving as a military target
example of usage: the role of a stone in marking a property boundary
example of usage: the role of subject in a clinical trial
example of usage: the student role
definition: A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts.
editor note: BFO 2 Reference: One major family of examples of non-rigid universals involves roles, and ontologies developed for corresponding administrative purposes may consist entirely of representatives of entities of this sort. Thus ‘professor’, defined as follows,b instance_of professor at t =Def. there is some c, c instance_of professor role & c inheres_in b at t.denotes a non-rigid universal and so also do ‘nurse’, ‘student’, ‘colonel’, ‘taxpayer’, and so forth. (These terms are all, in the jargon of philosophy, phase sortals.) By using role terms in definitions, we can create a BFO conformant treatment of such entities drawing on the fact that, while an instance of professor may be simultaneously an instance of trade union member, no instance of the type professor role is also (at any time) an instance of the type trade union member role (any more than any instance of the type color is at any time an instance of the type length).If an ontology of employment positions should be defined in terms of roles following the above pattern, this enables the ontology to do justice to the fact that individuals instantiate the corresponding universals – professor, sergeant, nurse – only during certain phases in their lives.
elucidation: b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])
has associated axiom(fol): (forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001]

Axiom
annotated source: role
annotated property: elucidation
annotated target: b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/061-001

Axiom
annotated source: role
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/061-001

fiat object part
type: Class
subclass of: material entity
BFO OWL specification label: fiat-object-part
BFO CLIF specification label: FiatObjectPart
example of usage: or with divisions drawn by cognitive subjects for practical reasons, such as the division of a cake (before slicing) into (what will become) slices (and thus member parts of an object aggregate). However, this does not mean that fiat object parts are dependent for their existence on divisions or delineations effected by cognitive subjects. If, for example, it is correct to conceive geological layers of the Earth as fiat object parts of the Earth, then even though these layers were first delineated in recent times, still existed long before such delineation and what holds of these layers (for example that the oldest layers are also the lowest layers) did not begin to hold because of our acts of delineation.Treatment of material entity in BFOExamples viewed by some as problematic cases for the trichotomy of fiat object part, object, and object aggregate include: a mussel on (and attached to) a rock, a slime mold, a pizza, a cloud, a galaxy, a railway train with engine and multiple carriages, a clonal stand of quaking aspen, a bacterial community (biofilm), a broken femur. Note that, as Aristotle already clearly recognized, such problematic cases – which lie at or near the penumbra of instances defined by the categories in question – need not invalidate these categories. The existence of grey objects does not prove that there are not objects which are black and objects which are white; the existence of mules does not prove that there are not objects which are donkeys and objects which are horses. It does, however, show that the examples in question need to be addressed carefully in order to show how they can be fitted into the proposed scheme, for example by recognizing additional subdivisions [29
example of usage: the FMA:regional parts of an intact human body.
example of usage: the Western hemisphere of the Earth
example of usage: the division of the brain into regions
example of usage: the division of the planet into hemispheres
example of usage: the dorsal and ventral surfaces of the body
example of usage: the upper and lower lobes of the left lung
editor note: BFO 2 Reference: Most examples of fiat object parts are associated with theoretically drawn divisions
elucidation: b is a fiat object part = Def. b is a material entity which is such that for all times t, if b exists at t then there is some object c such that b proper continuant_part of c at t and c is demarcated from the remainder of c by a two-dimensional continuant fiat boundary. (axiom label in BFO2 Reference: [027-004])
has associated axiom(fol): (forall (x) (if (FiatObjectPart x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y) (and (Object y) (properContinuantPartOfAt x y t)))))))) // axiom label in BFO2 CLIF: [027-004]

Axiom
annotated source: fiat object part
annotated property: elucidation
annotated target: b is a fiat object part = Def. b is a material entity which is such that for all times t, if b exists at t then there is some object c such that b proper continuant_part of c at t and c is demarcated from the remainder of c by a two-dimensional continuant fiat boundary. (axiom label in BFO2 Reference: [027-004])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/027-004

Axiom
annotated source: fiat object part
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (FiatObjectPart x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y) (and (Object y) (properContinuantPartOfAt x y t)))))))) // axiom label in BFO2 CLIF: [027-004]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/027-004

one-dimensional spatial region
type: Class
subclass of: spatial region
disjoint with: three-dimensional spatial region
BFO OWL specification label: 1d-s-region
BFO CLIF specification label: OneDimensionalSpatialRegion
example of usage: an edge of a cube-shaped portion of space.
elucidation: A one-dimensional spatial region is a line or aggregate of lines stretching from one point in space to another. (axiom label in BFO2 Reference: [038-001])
has associated axiom(fol): (forall (x) (if (OneDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [038-001]

Axiom
annotated source: one-dimensional spatial region
annotated property: elucidation
annotated target: A one-dimensional spatial region is a line or aggregate of lines stretching from one point in space to another. (axiom label in BFO2 Reference: [038-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/038-001

Axiom
annotated source: one-dimensional spatial region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (OneDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [038-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/038-001

object aggregate
type: Class
subclass of: material entity
BFO OWL specification label: object-aggregate
BFO CLIF specification label: ObjectAggregate
example of usage: a collection of cells in a blood biobank.
example of usage: a swarm of bees is an aggregate of members who are linked together through natural bonds
example of usage: a symphony orchestra
example of usage: an organization is an aggregate whose member parts have roles of specific types (for example in a jazz band, a chess club, a football team)
example of usage: defined by fiat: the aggregate of members of an organization
example of usage: defined through physical attachment: the aggregate of atoms in a lump of granite
example of usage: defined through physical containment: the aggregate of molecules of carbon dioxide in a sealed container
example of usage: defined via attributive delimitations such as: the patients in this hospital
example of usage: the aggregate of bearings in a constant velocity axle joint
example of usage: the aggregate of blood cells in your body
example of usage: the nitrogen atoms in the atmosphere
example of usage: the restaurants in Palo Alto
example of usage: your collection of Meissen ceramic plates.
editor note: An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects
editor note: BFO 2 Reference: object aggregates may gain and lose parts while remaining numerically identical (one and the same individual) over time. This holds both for aggregates whose membership is determined naturally (the aggregate of cells in your body) and aggregates determined by fiat (a baseball team, a congressional committee).
definition source: ISBN:978-3-938793-98-5pp124-158#Thomas Bittner and Barry Smith, 'A Theory of Granular Partitions', in K. Munn and B. Smith (eds.), Applied Ontology: An Introduction, Frankfurt/Lancaster: ontos, 2008, 125-158.
elucidation: b is an object aggregate means: b is a material entity consisting exactly of a plurality of objects as member_parts at all times at which b exists. (axiom label in BFO2 Reference: [025-004])
has associated axiom(fol): (forall (x) (if (ObjectAggregate x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y z) (and (Object y) (Object z) (memberPartOfAt y x t) (memberPartOfAt z x t) (not (= y z)))))) (not (exists (w t_1) (and (memberPartOfAt w x t_1) (not (Object w)))))))) // axiom label in BFO2 CLIF: [025-004]

Axiom
annotated source: object aggregate
annotated property: editor note
annotated target: An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000011

Axiom
annotated source: object aggregate
annotated property: editor note
annotated target: An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000301

Axiom
annotated source: object aggregate
annotated property: definition source
annotated target: ISBN:978-3-938793-98-5pp124-158#Thomas Bittner and Barry Smith, 'A Theory of Granular Partitions', in K. Munn and B. Smith (eds.), Applied Ontology: An Introduction, Frankfurt/Lancaster: ontos, 2008, 125-158.
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000300

Axiom
annotated source: object aggregate
annotated property: elucidation
annotated target: b is an object aggregate means: b is a material entity consisting exactly of a plurality of objects as member_parts at all times at which b exists. (axiom label in BFO2 Reference: [025-004])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/025-004

Axiom
annotated source: object aggregate
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (ObjectAggregate x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y z) (and (Object y) (Object z) (memberPartOfAt y x t) (memberPartOfAt z x t) (not (= y z)))))) (not (exists (w t_1) (and (memberPartOfAt w x t_1) (not (Object w)))))))) // axiom label in BFO2 CLIF: [025-004]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/025-004

three-dimensional spatial region
type: Class
subclass of: spatial region
BFO OWL specification label: 3d-s-region
BFO CLIF specification label: ThreeDimensionalSpatialRegion
example of usage: a cube-shaped region of space
example of usage: a sphere-shaped region of space,
elucidation: A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001])
has associated axiom(fol): (forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001]

Axiom
annotated source: three-dimensional spatial region
annotated property: elucidation
annotated target: A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/040-001

Axiom
annotated source: three-dimensional spatial region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/040-001

site
type: Class
subclass of: immaterial entity
BFO OWL specification label: site
BFO CLIF specification label: Site
example of usage: Manhattan Canyon)
example of usage: a hole in the interior of a portion of cheese
example of usage: a rabbit hole
example of usage: an air traffic control region defined in the airspace above an airport
example of usage: the Grand Canyon
example of usage: the Piazza San Marco
example of usage: the cockpit of an aircraft
example of usage: the hold of a ship
example of usage: the interior of a kangaroo pouch
example of usage: the interior of the trunk of your car
example of usage: the interior of your bedroom
example of usage: the interior of your office
example of usage: the interior of your refrigerator
example of usage: the lumen of your gut
example of usage: your left nostril (a fiat part – the opening – of your left nasal cavity)
elucidation: b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002])
has associated axiom(fol): (forall (x) (if (Site x) (ImmaterialEntity x))) // axiom label in BFO2 CLIF: [034-002]

Axiom
annotated source: site
annotated property: elucidation
annotated target: b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/034-002

Axiom
annotated source: site
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Site x) (ImmaterialEntity x))) // axiom label in BFO2 CLIF: [034-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/034-002

object
type: Class
subclass of: material entity
BFO OWL specification label: object
BFO CLIF specification label: Object
example of usage: atom
example of usage: cell
example of usage: cells and organisms
example of usage: engineered artifacts
example of usage: grain of sand
example of usage: molecule
example of usage: organelle
example of usage: organism
example of usage: planet
example of usage: solid portions of matter
example of usage: star
editor note: BFO 2 Reference: BFO rests on the presupposition that at multiple micro-, meso- and macroscopic scales reality exhibits certain stable, spatially separated or separable material units, combined or combinable into aggregates of various sorts (for example organisms into what are called ‘populations’). Such units play a central role in almost all domains of natural science from particle physics to cosmology. Many scientific laws govern the units in question, employing general terms (such as ‘molecule’ or ‘planet’) referring to the types and subtypes of units, and also to the types and subtypes of the processes through which such units develop and interact. The division of reality into such natural units is at the heart of biological science, as also is the fact that these units may form higher-level units (as cells form multicellular organisms) and that they may also form aggregates of units, for example as cells form portions of tissue and organs form families, herds, breeds, species, and so on. At the same time, the division of certain portions of reality into engineered units (manufactured artifacts) is the basis of modern industrial technology, which rests on the distributed mass production of engineered parts through division of labor and on their assembly into larger, compound units such as cars and laptops. The division of portions of reality into units is one starting point for the phenomenon of counting.
editor note: BFO 2 Reference: Each object is such that there are entities of which we can assert unproblematically that they lie in its interior, and other entities of which we can assert unproblematically that they lie in its exterior. This may not be so for entities lying at or near the boundary between the interior and exterior. This means that two objects – for example the two cells depicted in Figure 3 – may be such that there are material entities crossing their boundaries which belong determinately to neither cell. Something similar obtains in certain cases of conjoined twins (see below).
editor note: BFO 2 Reference: To say that b is causally unified means: b is a material entity which is such that its material parts are tied together in such a way that, in environments typical for entities of the type in question,if c, a continuant part of b that is in the interior of b at t, is larger than a certain threshold size (which will be determined differently from case to case, depending on factors such as porosity of external cover) and is moved in space to be at t at a location on the exterior of the spatial region that had been occupied by b at t, then either b’s other parts will be moved in coordinated fashion or b will be damaged (be affected, for example, by breakage or tearing) in the interval between t and t.causal changes in one part of b can have consequences for other parts of b without the mediation of any entity that lies on the exterior of b. Material entities with no proper material parts would satisfy these conditions trivially. Candidate examples of types of causal unity for material entities of more complex sorts are as follows (this is not intended to be an exhaustive list):CU1: Causal unity via physical coveringHere the parts in the interior of the unified entity are combined together causally through a common membrane or other physical covering\. The latter points outwards toward and may serve a protective function in relation to what lies on the exterior of the entity [13, 47
editor note: BFO 2 Reference: an object is a maximal causally unified material entity
editor note: BFO 2 Reference: ‘objects’ are sometimes referred to as ‘grains’ [74
elucidation: b is an object means: b is a material entity which manifests causal unity of one or other of the types CUn listed above & is of a type (a material universal) instances of which are maximal relative to this criterion of causal unity. (axiom label in BFO2 Reference: [024-001])

Axiom
annotated source: object
annotated property: elucidation
annotated target: b is an object means: b is a material entity which manifests causal unity of one or other of the types CUn listed above & is of a type (a material universal) instances of which are maximal relative to this criterion of causal unity. (axiom label in BFO2 Reference: [024-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/024-001

generically dependent continuant
type: Class
subclass of: continuant
BFO OWL specification label: gdc
BFO CLIF specification label: GenericallyDependentContinuant
example of usage: The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity.
example of usage: the pdf file on your laptop, the pdf file that is a copy thereof on my laptop
example of usage: the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule.
definition: A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time.
definition: b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])
has associated axiom(fol): (iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001]

Axiom
annotated source: generically dependent continuant
annotated property: definition
annotated target: b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/074-001

Axiom
annotated source: generically dependent continuant
annotated property: has associated axiom(fol)
annotated target: (iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/074-001

function
type: Class
subclass of: disposition
BFO OWL specification label: function
BFO CLIF specification label: Function
example of usage: the function of a hammer to drive in nails
example of usage: the function of a heart pacemaker to regulate the beating of a heart through electricity
example of usage: the function of amylase in saliva to break down starch into sugar
editor note: BFO 2 Reference: In the past, we have distinguished two varieties of function, artifactual function and biological function. These are not asserted subtypes of BFO:function however, since the same function – for example: to pump, to transport – can exist both in artifacts and in biological entities. The asserted subtypes of function that would be needed in order to yield a separate monoheirarchy are not artifactual function, biological function, etc., but rather transporting function, pumping function, etc.
elucidation: A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])
has associated axiom(fol): (forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001]

Axiom
annotated source: function
annotated property: elucidation
annotated target: A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/064-001

Axiom
annotated source: function
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/064-001

process boundary
type: Class
subclass of: occurrent
BFO OWL specification label: p-boundary
BFO CLIF specification label: ProcessBoundary
example of usage: the boundary between the 2nd and 3rd year of your life.
definition: p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])
has associated axiom(nl): Every process boundary occupies_temporal_region a zero-dimensional temporal region. (axiom label in BFO2 Reference: [085-002])
has associated axiom(fol): (forall (x) (if (ProcessBoundary x) (exists (y) (and (ZeroDimensionalTemporalRegion y) (occupiesTemporalRegion x y))))) // axiom label in BFO2 CLIF: [085-002]
has associated axiom(fol): (iff (ProcessBoundary a) (exists (p) (and (Process p) (temporalPartOf a p) (not (exists (b) (properTemporalPartOf b a)))))) // axiom label in BFO2 CLIF: [084-001]

Axiom
annotated source: process boundary
annotated property: definition
annotated target: p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/084-001

Axiom
annotated source: process boundary
annotated property: has associated axiom(nl)
annotated target: Every process boundary occupies_temporal_region a zero-dimensional temporal region. (axiom label in BFO2 Reference: [085-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/085-002

Axiom
annotated source: process boundary
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (ProcessBoundary x) (exists (y) (and (ZeroDimensionalTemporalRegion y) (occupiesTemporalRegion x y))))) // axiom label in BFO2 CLIF: [085-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/085-002

Axiom
annotated source: process boundary
annotated property: has associated axiom(fol)
annotated target: (iff (ProcessBoundary a) (exists (p) (and (Process p) (temporalPartOf a p) (not (exists (b) (properTemporalPartOf b a)))))) // axiom label in BFO2 CLIF: [084-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/084-001

one-dimensional temporal region
type: Class
subclass of: temporal region
disjoint with: zero-dimensional temporal region
BFO OWL specification label: 1d-t-region
BFO CLIF specification label: OneDimensionalTemporalRegion
example of usage: the temporal region during which a process occurs.
editor note: BFO 2 Reference: A temporal interval is a special kind of one-dimensional temporal region, namely one that is self-connected (is without gaps or breaks).
elucidation: A one-dimensional temporal region is a temporal region that is extended. (axiom label in BFO2 Reference: [103-001])
has associated axiom(fol): (forall (x) (if (OneDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [103-001]

Axiom
annotated source: one-dimensional temporal region
annotated property: elucidation
annotated target: A one-dimensional temporal region is a temporal region that is extended. (axiom label in BFO2 Reference: [103-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/103-001

Axiom
annotated source: one-dimensional temporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (OneDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [103-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/103-001

material entity
type: Class
subclass of: independent continuant
disjoint with: immaterial entity
BFO OWL specification label: material
BFO CLIF specification label: MaterialEntity
example of usage: a flame
example of usage: a forest fire
example of usage: a human being
example of usage: a hurricane
example of usage: a photon
example of usage: a puff of smoke
example of usage: a sea wave
example of usage: a tornado
example of usage: an aggregate of human beings.
example of usage: an energy wave
example of usage: an epidemic
example of usage: the undetached arm of a human being
definition: An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.
editor note: BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60
editor note: BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity.
editor note: BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here.
elucidation: A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])
has associated axiom(nl): Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])
has associated axiom(nl): every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])
has associated axiom(fol): (forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002]
has associated axiom(fol): (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002]
has associated axiom(fol): (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002]

Axiom
annotated source: material entity
annotated property: elucidation
annotated target: A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/019-002

Axiom
annotated source: material entity
annotated property: has associated axiom(nl)
annotated target: Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/020-002

Axiom
annotated source: material entity
annotated property: has associated axiom(nl)
annotated target: every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/021-002

Axiom
annotated source: material entity
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/019-002

Axiom
annotated source: material entity
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/021-002

Axiom
annotated source: material entity
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/020-002

continuant fiat boundary
type: Class
subclass of: immaterial entity
BFO OWL specification label: cf-boundary
BFO CLIF specification label: ContinuantFiatBoundary
definition: b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001])
editor note: BFO 2 Reference: In BFO 1.1 the assumption was made that the external surface of a material entity such as a cell could be treated as if it were a boundary in the mathematical sense. The new document propounds the view that when we talk about external surfaces of material objects in this way then we are talking about something fiat. To be dealt with in a future version: fiat boundaries at different levels of granularity.More generally, the focus in discussion of boundaries in BFO 2.0 is now on fiat boundaries, which means: boundaries for which there is no assumption that they coincide with physical discontinuities. The ontology of boundaries becomes more closely allied with the ontology of regions.
editor note: BFO 2 Reference: a continuant fiat boundary is a boundary of some material entity (for example: the plane separating the Northern and Southern hemispheres; the North Pole), or it is a boundary of some immaterial entity (for example of some portion of airspace). Three basic kinds of continuant fiat boundary can be distinguished (together with various combination kinds [29
editor note: Continuant fiat boundary doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the mereological sum of two-dimensional continuant fiat boundary and a one dimensional continuant fiat boundary that doesn't overlap it. The situation is analogous to temporal and spatial regions.
has associated axiom(nl): Every continuant fiat boundary is located at some spatial region at every time at which it exists
has associated axiom(fol): (iff (ContinuantFiatBoundary a) (and (ImmaterialEntity a) (exists (b) (and (or (ZeroDimensionalSpatialRegion b) (OneDimensionalSpatialRegion b) (TwoDimensionalSpatialRegion b)) (forall (t) (locatedInAt a b t)))) (not (exists (c t) (and (SpatialRegion c) (continuantPartOfAt c a t)))))) // axiom label in BFO2 CLIF: [029-001]

Axiom
annotated source: continuant fiat boundary
annotated property: definition
annotated target: b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/029-001

Axiom
annotated source: continuant fiat boundary
annotated property: editor note
annotated target: Continuant fiat boundary doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the mereological sum of two-dimensional continuant fiat boundary and a one dimensional continuant fiat boundary that doesn't overlap it. The situation is analogous to temporal and spatial regions.
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000008

Axiom
annotated source: continuant fiat boundary
annotated property: has associated axiom(fol)
annotated target: (iff (ContinuantFiatBoundary a) (and (ImmaterialEntity a) (exists (b) (and (or (ZeroDimensionalSpatialRegion b) (OneDimensionalSpatialRegion b) (TwoDimensionalSpatialRegion b)) (forall (t) (locatedInAt a b t)))) (not (exists (c t) (and (SpatialRegion c) (continuantPartOfAt c a t)))))) // axiom label in BFO2 CLIF: [029-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/029-001

immaterial entity
type: Class
subclass of: independent continuant
BFO OWL specification label: immaterial
BFO CLIF specification label: ImmaterialEntity
editor note: BFO 2 Reference: Immaterial entities are divided into two subgroups:boundaries and sites, which bound, or are demarcated in relation, to material entities, and which can thus change location, shape and size and as their material hosts move or change shape or size (for example: your nasal passage; the hold of a ship; the boundary of Wales (which moves with the rotation of the Earth) [38, 7, 10

one-dimensional continuant fiat boundary
type: Class
subclass of: continuant fiat boundary
disjoint with: two-dimensional continuant fiat boundary
disjoint with: zero-dimensional continuant fiat boundary
BFO OWL specification label: 1d-cf-boundary
BFO CLIF specification label: OneDimensionalContinuantFiatBoundary
example of usage: The Equator
example of usage: all geopolitical boundaries
example of usage: all lines of latitude and longitude
example of usage: the line separating the outer surface of the mucosa of the lower lip from the outer surface of the skin of the chin.
example of usage: the median sulcus of your tongue
elucidation: a one-dimensional continuant fiat boundary is a continuous fiat line whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [032-001])
has associated axiom(fol): (iff (OneDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (OneDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [032-001]

Axiom
annotated source: one-dimensional continuant fiat boundary
annotated property: elucidation
annotated target: a one-dimensional continuant fiat boundary is a continuous fiat line whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [032-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/032-001

Axiom
annotated source: one-dimensional continuant fiat boundary
annotated property: has associated axiom(fol)
annotated target: (iff (OneDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (OneDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [032-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/032-001

process profile
type: Class
subclass of: process
disjoint with: history
BFO OWL specification label: process-profile
BFO CLIF specification label: ProcessProfile
example of usage: On a somewhat higher level of complexity are what we shall call rate process profiles, which are the targets of selective abstraction focused not on determinate quality magnitudes plotted over time, but rather on certain ratios between these magnitudes and elapsed times. A speed process profile, for example, is represented by a graph plotting against time the ratio of distance covered per unit of time. Since rates may change, and since such changes, too, may have rates of change, we have to deal here with a hierarchy of process profile universals at successive levels
example of usage: One important sub-family of rate process profiles is illustrated by the beat or frequency profiles of cyclical processes, illustrated by the 60 beats per minute beating process of John’s heart, or the 120 beats per minute drumming process involved in one of John’s performances in a rock band, and so on. Each such process includes what we shall call a beat process profile instance as part, a subtype of rate process profile in which the salient ratio is not distance covered but rather number of beat cycles per unit of time. Each beat process profile instance instantiates the determinable universal beat process profile. But it also instantiates multiple more specialized universals at lower levels of generality, selected from rate process profilebeat process profileregular beat process profile3 bpm beat process profile4 bpm beat process profileirregular beat process profileincreasing beat process profileand so on.In the case of a regular beat process profile, a rate can be assigned in the simplest possible fashion by dividing the number of cycles by the length of the temporal region occupied by the beating process profile as a whole. Irregular process profiles of this sort, for example as identified in the clinic, or in the readings on an aircraft instrument panel, are often of diagnostic significance.
example of usage: The simplest type of process profiles are what we shall call ‘quality process profiles’, which are the process profiles which serve as the foci of the sort of selective abstraction that is involved when measurements are made of changes in single qualities, as illustrated, for example, by process profiles of mass, temperature, aortic pressure, and so on.
definition: b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002])
elucidation: b process_profile_of c holds when b proper_occurrent_part_of c& there is some proper_occurrent_part d of c which has no parts in common with b & is mutually dependent on b& is such that b, c and d occupy the same temporal region (axiom label in BFO2 Reference: [094-005])
has associated axiom(fol): (forall (x y) (if (processProfileOf x y) (and (properContinuantPartOf x y) (exists (z t) (and (properOccurrentPartOf z y) (TemporalRegion t) (occupiesSpatioTemporalRegion x t) (occupiesSpatioTemporalRegion y t) (occupiesSpatioTemporalRegion z t) (not (exists (w) (and (occurrentPartOf w x) (occurrentPartOf w z))))))))) // axiom label in BFO2 CLIF: [094-005]
has associated axiom(fol): (iff (ProcessProfile a) (exists (b) (and (Process b) (processProfileOf a b)))) // axiom label in BFO2 CLIF: [093-002]

Axiom
annotated source: process profile
annotated property: definition
annotated target: b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/093-002

Axiom
annotated source: process profile
annotated property: elucidation
annotated target: b process_profile_of c holds when b proper_occurrent_part_of c& there is some proper_occurrent_part d of c which has no parts in common with b & is mutually dependent on b& is such that b, c and d occupy the same temporal region (axiom label in BFO2 Reference: [094-005])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/094-005

Axiom
annotated source: process profile
annotated property: has associated axiom(fol)
annotated target: (forall (x y) (if (processProfileOf x y) (and (properContinuantPartOf x y) (exists (z t) (and (properOccurrentPartOf z y) (TemporalRegion t) (occupiesSpatioTemporalRegion x t) (occupiesSpatioTemporalRegion y t) (occupiesSpatioTemporalRegion z t) (not (exists (w) (and (occurrentPartOf w x) (occurrentPartOf w z))))))))) // axiom label in BFO2 CLIF: [094-005]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/094-005

Axiom
annotated source: process profile
annotated property: has associated axiom(fol)
annotated target: (iff (ProcessProfile a) (exists (b) (and (Process b) (processProfileOf a b)))) // axiom label in BFO2 CLIF: [093-002]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/093-002

relational quality
type: Class
subclass of: quality
BFO OWL specification label: r-quality
BFO CLIF specification label: RelationalQuality
example of usage: John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married.
example of usage: a marriage bond, an instance of love, an obligation between one person and another.
definition: b is a relational quality = Def. for some independent continuants c, d and for some time t: b quality_of c at t & b quality_of d at t. (axiom label in BFO2 Reference: [057-001])
has associated axiom(fol): (iff (RelationalQuality a) (exists (b c t) (and (IndependentContinuant b) (IndependentContinuant c) (qualityOfAt a b t) (qualityOfAt a c t)))) // axiom label in BFO2 CLIF: [057-001]

Axiom
annotated source: relational quality
annotated property: definition
annotated target: b is a relational quality = Def. for some independent continuants c, d and for some time t: b quality_of c at t & b quality_of d at t. (axiom label in BFO2 Reference: [057-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/057-001

Axiom
annotated source: relational quality
annotated property: has associated axiom(fol)
annotated target: (iff (RelationalQuality a) (exists (b c t) (and (IndependentContinuant b) (IndependentContinuant c) (qualityOfAt a b t) (qualityOfAt a c t)))) // axiom label in BFO2 CLIF: [057-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/057-001

two-dimensional continuant fiat boundary
type: Class
subclass of: continuant fiat boundary
BFO OWL specification label: 2d-cf-boundary
BFO CLIF specification label: TwoDimensionalContinuantFiatBoundary
elucidation: a two-dimensional continuant fiat boundary (surface) is a self-connected fiat surface whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [033-001])
has associated axiom(fol): (iff (TwoDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (TwoDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [033-001]

Axiom
annotated source: two-dimensional continuant fiat boundary
annotated property: elucidation
annotated target: a two-dimensional continuant fiat boundary (surface) is a self-connected fiat surface whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [033-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/033-001

Axiom
annotated source: two-dimensional continuant fiat boundary
annotated property: has associated axiom(fol)
annotated target: (iff (TwoDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (TwoDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [033-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/033-001

zero-dimensional continuant fiat boundary
type: Class
subclass of: continuant fiat boundary
BFO OWL specification label: 0d-cf-boundary
BFO CLIF specification label: ZeroDimensionalContinuantFiatBoundary
example of usage: the geographic North Pole
example of usage: the point of origin of some spatial coordinate system.
example of usage: the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet
editor note: zero dimension continuant fiat boundaries are not spatial points. Considering the example 'the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet' : There are many frames in which that point is zooming through many points in space. Whereas, no matter what the frame, the quadripoint is always in the same relation to the boundaries of Colorado, Utah, New Mexico, and Arizona.
elucidation: a zero-dimensional continuant fiat boundary is a fiat point whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [031-001])
has associated axiom(fol): (iff (ZeroDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (ZeroDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [031-001]

Axiom
annotated source: zero-dimensional continuant fiat boundary
annotated property: editor note
annotated target: zero dimension continuant fiat boundaries are not spatial points. Considering the example 'the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet' : There are many frames in which that point is zooming through many points in space. Whereas, no matter what the frame, the quadripoint is always in the same relation to the boundaries of Colorado, Utah, New Mexico, and Arizona.
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/0000001
comment: requested by Melanie Courtot

Axiom
annotated source: zero-dimensional continuant fiat boundary
annotated property: elucidation
annotated target: a zero-dimensional continuant fiat boundary is a fiat point whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [031-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/031-001

Axiom
annotated source: zero-dimensional continuant fiat boundary
annotated property: has associated axiom(fol)
annotated target: (iff (ZeroDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (ZeroDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [031-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/031-001

zero-dimensional temporal region
type: Class
subclass of: temporal region
BFO OWL specification label: 0d-t-region
BFO CLIF specification label: ZeroDimensionalTemporalRegion
example of usage: a temporal region that is occupied by a process boundary
example of usage: right now
example of usage: the moment at which a child is born
example of usage: the moment at which a finger is detached in an industrial accident
example of usage: the moment of death.
alternative term: temporal instant.
elucidation: A zero-dimensional temporal region is a temporal region that is without extent. (axiom label in BFO2 Reference: [102-001])
has associated axiom(fol): (forall (x) (if (ZeroDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [102-001]

Axiom
annotated source: zero-dimensional temporal region
annotated property: elucidation
annotated target: A zero-dimensional temporal region is a temporal region that is without extent. (axiom label in BFO2 Reference: [102-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/102-001

Axiom
annotated source: zero-dimensional temporal region
annotated property: has associated axiom(fol)
annotated target: (forall (x) (if (ZeroDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [102-001]
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/102-001

history
type: Class
subclass of: process
BFO OWL specification label: history
BFO CLIF specification label: History
elucidation: A history is a process that is the sum of the totality of processes taking place in the spatiotemporal region occupied by a material entity or site, including processes on the surface of the entity or within the cavities to which it serves as host. (axiom label in BFO2 Reference: [138-001])

Axiom
annotated source: history
annotated property: elucidation
annotated target: A history is a process that is the sum of the totality of processes taking place in the spatiotemporal region occupied by a material entity or site, including processes on the surface of the entity or within the cavities to which it serves as host. (axiom label in BFO2 Reference: [138-001])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/138-001

organism or virus or viroid
type: Class
subclass of: organismal entity
definition: Material anatomical entity that is a member of an individual species or is a viral or viroid particle.
OBO foundry unique label: organism or virus
IAO created by: Melissa Haendel
IAO creation date: 9/18/11

organism
type: Class
subclass of: organism or virus or viroid
definition: An individual member of a clade.
OBO foundry unique label: organism
IAO created by: mah
IAO creation date: 7.16.2011
comment: A general term for organism that is agnostic about single cell vs multi-cellular. Note that this is a subclass of 'anatomical structure', meaning that an organism must be a connected structure. So, if I take one plant and make a rooted cutting from a it, I now have two (clonally related) organisms.

geographic feature
type: Class
subclass of: environmental feature
imported from: envo.owl
database_cross_reference: Wikipedia:Geographic_feature
has_exact_synonym: macroscopic spatial feature
has_obo_namespace: ENVO
id: ENVO:00000000
comment: May appear on a map.

anthropogenic geographic feature
type: Class
subclass of: geographic feature
imported from: envo.owl
database_cross_reference: FTT:78
database_cross_reference: TGN:50001
has_obo_namespace: ENVO
has_related_synonym: man-made feature
has_related_synonym: manmade feature
id: ENVO:00000002

constructed feature
type: Class
subclass of: anthropogenic geographic feature
definition: A feature that has been constructed by deliberate human effort.
imported from: envo.owl
has_obo_namespace: ENVO
id: ENVO:00000070
comment: "constructed" should probably be made something like a quality and this class obsoleted.

environmental feature
type: Class
subclass of: material entity
definition: A material entity which determines an environmental system.
imported from: envo.owl
has_obo_namespace: ENVO
id: ENVO:00002297
comment: A material entity determines an environmental system when its removal would cause the collapse of that system. For example, a seamount determines a seamount environment, acting as its 'hub'. This class is currently being aligned to the Basic Formal Ontology. Following this alignment, its definition and the definitions of its subclasses will be revised.

human dwelling
type: Class
subclass of: constructed feature
definition: A self-contained constructed feature used by one or more households as a home, such as a house, apartment, mobile home, houseboat or other 'substantial' structure. A dwelling typically includes nearby outbuildings, sheds etc. within the curtilage of the property, excluding any 'open fields beyond'. It has significance in relation to search and seizure, conveyancing of real property, burglary, trespass, and land use planning.
editor note: See https://github.com/EnvironmentOntology/envo/issues/264 for discussion. This definition needs a lot of clean up and links to household and related classes must be made to form logical definitions for inference to work.
editor note: Subclasses will be added by inference.
imported from: envo.owl

flocculation
type: Class
subclass of: multi-organism cellular process
definition: The reversible, non-sexual aggregation of single-celled organisms in suspension to form aggregates of many cells known as flocs.
imported from: go.owl
database_cross_reference: Wikipedia:Flocculation
has_obo_namespace: biological_process
id: GO:0000128
in_subset: goslim pir
in_subset: gosubset prok
comment: The word floc derives from the Latin word floccus, which means a tuft of wool.

flocculation via cell wall protein-carbohydrate interaction
type: Class
subclass of: flocculation
definition: The reversible, non-sexual aggregation of cells mediated by the binding of proteins in the cell wall of one cell to carbohydrates in the cell wall of another cell. An example of this process is found in Saccharomyces cerevisiae, in which it is pH- and calcium-dependent.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0000501
in_subset: gosubset prok

conjugation
type: Class
subclass of: multi-organism cellular process
definition: The union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.
imported from: go.owl
database_cross_reference: Wikipedia:Conjugation
has_obo_namespace: biological_process
id: GO:0000746
in_subset: goslim aspergillus
in_subset: goslim candida
in_subset: goslim metagenomics
in_subset: goslim pir
in_subset: goslim yeast
in_subset: gosubset prok

conjugation with cellular fusion
type: Class
subclass of: conjugation
subclass of: sexual reproduction
definition: A conjugation process that results in the union of cellular and genetic information from compatible mating types. An example of this process is found in Saccharomyces cerevisiae.
imported from: go.owl
has_alternative_id: GO:0007322
has_alternative_id: GO:0007333
has_alternative_id: GO:0030461
has_alternative_id: GO:0030477
has_obo_namespace: biological_process
has_related_synonym: cell fusion
has_related_synonym: mating
id: GO:0000747
in_subset: goslim pombe

conjugation with mutual genetic exchange
type: Class
subclass of: conjugation
definition: A conjugation process that results in the mutual exchange and union of only genetic information between compatible mating types. Conjugation without cellular fusion requires direct cellular contact between the organisms without plasma membrane fusion. The organisms involved in conjugation without cellular fusion separate after nuclear exchange.
imported from: go.owl
has_exact_synonym: conjugation without cellular fusion
has_obo_namespace: biological_process
id: GO:0000748

agglutination involved in conjugation with cellular fusion
type: Class
subclass of: agglutination involved in conjugation
subclass of: multi-organism cellular process
definition: During conjugation with cellular fusion, the aggregation or adhesion of compatible mating types via complementary cell-cell interactions. An example of this process is agglutination in Saccharomyces cerevisiae.
imported from: go.owl
has_alternative_id: GO:0007334
has_broad_synonym: agglutination
has_exact_synonym: cell-cell adhesion during conjugation with cellular fusion
has_exact_synonym: cell-cell adhesion during mating
has_obo_namespace: biological_process
id: GO:0000752

agglutination involved in conjugation with mutual genetic exchange
type: Class
subclass of: agglutination involved in conjugation
definition: During conjugation without cellular fusion, the aggregation or adhesion of compatible mating types via complementary cell-cell interactions.
imported from: go.owl
has_exact_synonym: agglutination involved in conjugation without cellular fusion
has_obo_namespace: biological_process
id: GO:0000758

conjugant formation
type: Class
subclass of: multi-organismal cell-cell adhesion
definition: During conjugation without cellular fusion, the process that results in pairing complementary mating types. Localized morphological, cytological, and cytoskeletal changes connect the mating types without cytoplasmic mixing.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0000761

pheromone-induced unidirectional conjugation
type: Class
subclass of: unidirectional conjugation
definition: The process of unidirectional (polarized) transfer of genetic information in response to a pheromone. It involves direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells; some or all of the chromosome(s) of one cell ('male') is then transferred into the other cell ('female'); unidirectional conjugation occurs between cells of different mating types.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0000762

agglutination involved in conjugation
type: Class
subclass of: multi-organismal cell-cell adhesion
definition: The aggregation or adhesion of compatible mating types via complementary cell-cell interactions prior to the formation of irreversible cellular contacts during conjugation.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0000771

response to protozoan
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.
imported from: go.owl
has_alternative_id: GO:0042833
has_exact_synonym: response to protozoa
has_exact_synonym: response to protozoon
has_obo_namespace: biological_process
has_related_synonym: resistance to pathogenic protozoa
id: GO:0001562

detection of protozoan
type: Class
subclass of: response to protozoan
subclass of: detection of other organism
definition: The series of events in which a stimulus from a protozoan is received and converted into a molecular signal.
imported from: go.owl
has_exact_synonym: detection of protozoa
has_exact_synonym: detection of protozoon
has_obo_namespace: biological_process
has_related_synonym: perception of protozoa
id: GO:0001563

response to yeast
type: Class
subclass of: response to fungus
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0001878
comment: defined as response to Saccharomycotina (true yeasts). This excludes fission yeast.

detection of yeast
type: Class
subclass of: response to yeast
subclass of: detection of fungus
definition: The series of events in which a stimulus from a yeast is received and converted into a molecular signal.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0001879

cytolysis by symbiont of host cells
type: Class
subclass of: killing by symbiont of host cells
subclass of: cytolysis in other organism involved in symbiotic interaction
definition: The killing by an organism of a cell in its host organism by means of the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: cytolysis by organism of host cells
has_obo_namespace: biological_process
id: GO:0001897
in_subset: gosubset prok

killing by symbiont of host cells
type: Class
subclass of: disruption by symbiont of host cell
subclass of: killing of cells in other organism involved in symbiotic interaction
definition: Any process mediated by an organism that results in the death of cells in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0001907
in_subset: gosubset prok

suckling behavior
type: Class
subclass of: multi-organism behavior
definition: Specific behavior of a newborn or infant mammal that results in the derivation of nourishment from the breast.
imported from: go.owl
has_exact_synonym: nursing behavior
has_obo_namespace: biological_process
id: GO:0001967

aggressive behavior
type: Class
subclass of: multi-organism behavior
definition: A behavioral interaction between organisms in which one organism has the intention of inflicting physical damage on another individual.
imported from: go.owl
database_cross_reference: Wikipedia:Aggression
has_exact_synonym: aggression
has_obo_namespace: biological_process
id: GO:0002118

predatory behavior
type: Class
subclass of: aggressive behavior
subclass of: feeding on or from other organism
definition: Aggressive behavior involving attack on prey by a predator.
imported from: go.owl
has_exact_synonym: predatory aggression
has_exact_synonym: predatory aggressive behavior
has_obo_namespace: biological_process
id: GO:0002120

inter-male aggressive behavior
type: Class
subclass of: aggressive behavior
definition: Aggressive behavior based on competition between males of the same species over access to resources such as females, dominance, status, etc. and characterized by noise, threats, and is often less injurious.
imported from: go.owl
has_exact_synonym: inter-male aggression
has_obo_namespace: biological_process
id: GO:0002121

fear-induced aggressive behavior
type: Class
subclass of: aggressive behavior
definition: Aggressive behavior associated with attempts to flee from a threat.
imported from: go.owl
has_exact_synonym: fear-induced aggression
has_obo_namespace: biological_process
id: GO:0002122

irritable aggressive behavior
type: Class
subclass of: aggressive behavior
definition: Aggressive behavior induced by frustration and directed against an available target.
imported from: go.owl
has_exact_synonym: irritable aggression
has_obo_namespace: biological_process
id: GO:0002123

territorial aggressive behavior
type: Class
subclass of: aggressive behavior
definition: Aggressive behavior performed in defence of a fixed area against intruders, typically conspecifics.
imported from: go.owl
has_exact_synonym: territorial aggression
has_obo_namespace: biological_process
id: GO:0002124

maternal aggressive behavior
type: Class
subclass of: aggressive behavior
definition: Aggressive behavior of a female to protect her offspring from a threat.
imported from: go.owl
has_exact_synonym: maternal aggression
has_obo_namespace: biological_process
id: GO:0002125
comment: Paternal aggression also exists. Serves to protect the offspring from intruders.

instrumental aggressive behavior
type: Class
subclass of: aggressive behavior
definition: Aggressive behavior directed towards obtaining some goal, considered to be a learned response to a situation.
imported from: go.owl
has_exact_synonym: instrumental aggression
has_obo_namespace: biological_process
id: GO:0002126

behavioral defense response to insect
type: Class
subclass of: defense response to insect
subclass of: multi-organism behavior
definition: A behavioral response seeking to protect an organism from an a perceived external threat from an insect or insects to that organism.
imported from: go.owl
has_exact_synonym: behavioural defense response to insect
has_obo_namespace: biological_process
id: GO:0002211

behavioral defense response to nematode
type: Class
subclass of: defense response to nematode
subclass of: multi-organism behavior
definition: A behavioral response seeking to protect an organism from an a perceived external threat from a nematode or nematodes to that organism.
imported from: go.owl
has_exact_synonym: behavioural defense response to nematode
has_obo_namespace: biological_process
id: GO:0002212

defense response to insect
type: Class
subclass of: response to insect
subclass of: defense response to other organism
definition: A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism.
imported from: go.owl
has_alternative_id: GO:0002214
has_exact_synonym: physiological defense response to insect
has_obo_namespace: biological_process
id: GO:0002213

defense response to nematode
type: Class
subclass of: response to nematode
subclass of: defense response to other organism
definition: A response to protect an organism from a directly detected or perceived external threat from a nematode or nematodes, which results in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
imported from: go.owl
has_alternative_id: GO:0002216
has_exact_synonym: physiological defense response to nematode
has_obo_namespace: biological_process
id: GO:0002215

defense response to oomycetes
type: Class
subclass of: response to oomycetes
subclass of: defense response to other organism
definition: Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0002229

detection of oomycetes
type: Class
subclass of: response to oomycetes
subclass of: detection of other organism
definition: The series of events in which a stimulus from an oomycetes is received and converted into a molecular signal.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0002231

response to oomycetes
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an oomycetes.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0002239

response to parasitic plant
type: Class
subclass of: response to symbiont
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a parasitic plant.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0002241

defense response to parasitic plant
type: Class
subclass of: response to parasitic plant
subclass of: defense response to other organism
definition: Reactions triggered in response to the presence of a parasitic plant that act to protect an organism.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0002242

detection of parasitic plant
type: Class
subclass of: response to parasitic plant
subclass of: detection of symbiont
definition: The series of events in which a stimulus from a parasitic plant is received and converted into a molecular signal.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0002243

induction by virus of host cell-cell fusion
type: Class
subclass of: modulation by virus of host process
definition: The process of syncytia-forming cell-cell fusion, caused by a virus.
imported from: go.owl
has_exact_synonym: induction by virus of cell-cell fusion in host
has_exact_synonym: viral-induced cell-cell fusion
has_exact_synonym: viral-induced host cell-cell fusion
has_narrow_synonym: viral-induced membrane fusion
has_obo_namespace: biological_process
id: GO:0006948
comment: Where syncytium formation results in the spread of virus in the host, also consider annotating to the term 'spread of virus in multicellular host ; GO:0046739'.

male-specific antibacterial humoral response
type: Class
subclass of: antibacterial humoral response
subclass of: male-specific defense response to bacterium
definition: An immune response against bacteria, specific to males and mediated through a body fluid.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0006962

insemination
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: The introduction of semen or sperm into the genital tract of a female.
imported from: go.owl
database_cross_reference: Wikipedia:Insemination
has_obo_namespace: biological_process
id: GO:0007320

sperm displacement
type: Class
subclass of: sperm competition
definition: The physical displacement of sperm stored from previous mating encounters.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0007321

penetration of zona pellucida
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0007341

female pregnancy
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth.
imported from: go.owl
database_cross_reference: Wikipedia:Gestation
has_exact_synonym: gestation
has_obo_namespace: biological_process
has_related_synonym: carrying of young
id: GO:0007565

parturition
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs.
imported from: go.owl
has_exact_synonym: giving birth
has_narrow_synonym: egg laying
has_obo_namespace: biological_process
id: GO:0007567

mating behavior
type: Class
subclass of: multi-organism reproductive behavior
definition: The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes.
imported from: go.owl
database_cross_reference: Wikipedia:Mating_behaviour
has_exact_synonym: mating behaviour
has_obo_namespace: biological_process
id: GO:0007617

mating
type: Class
subclass of: multi-organism reproductive process
definition: The pairwise union of individuals for the purpose of sexual reproduction, ultimately resulting in the formation of zygotes.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0007618

courtship behavior
type: Class
subclass of: mating behavior
definition: The behavioral interactions between organisms for the purpose of attracting sexual partners.
imported from: go.owl
has_exact_synonym: courtship behaviour
has_obo_namespace: biological_process
id: GO:0007619

copulation
type: Class
subclass of: mating
definition: The act of sexual union between male and female, involving the transfer of sperm.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0007620

negative regulation of female receptivity
type: Class
subclass of: regulation of female receptivity
definition: Any process that stops, prevents or reduces the receptiveness of a female to male advances.
imported from: go.owl
has_exact_synonym: down regulation of female receptivity
has_exact_synonym: down-regulation of female receptivity
has_exact_synonym: downregulation of female receptivity
has_narrow_synonym: inhibition of female receptivity
has_obo_namespace: biological_process
id: GO:0007621

male courtship behavior
type: Class
subclass of: male mating behavior
definition: The behavior of a male, for the purpose of attracting a sexual partner. An example of this process is found in Drosophila melanogaster.
imported from: go.owl
has_alternative_id: GO:0016542
has_exact_synonym: male courtship behaviour
has_obo_namespace: biological_process
id: GO:0008049

female courtship behavior
type: Class
subclass of: female mating behavior
definition: The behavior of a female, for the purpose of attracting a sexual partner.
imported from: go.owl
has_exact_synonym: female courtship behaviour
has_obo_namespace: biological_process
id: GO:0008050

phage shock
type: Class
subclass of: cellular response to virus
definition: A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0009271
in_subset: gosubset prok

unidirectional conjugation
type: Class
subclass of: conjugation
subclass of: genetic transfer
definition: The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells; some or all of the chromosome(s) of one cell ('male') is then transferred into the other cell ('female'); unidirectional conjugation occurs between cells of different mating types. Examples of this process are found in Prokaryotes.
imported from: go.owl
has_broad_synonym: mating
has_obo_namespace: biological_process
id: GO:0009291
in_subset: gosubset prok

genetic transfer
type: Class
subclass of: multi-organism cellular process
definition: In the absence of a sexual life cycle, the process involved in the introduction of genetic information to create a genetically different individual.
imported from: go.owl
has_broad_synonym: genetic exchange
has_obo_namespace: biological_process
id: GO:0009292
in_subset: goslim pir
in_subset: gosubset prok
comment: GO:0009292 should not be used for annotation of phage lysogeny (integration of the bacteriophage nucleic acid into the host bacterium's genome).

transduction
type: Class
subclass of: genetic transfer
definition: The transfer of genetic information to a bacterium from a bacteriophage or between bacterial or yeast cells mediated by a phage vector.
imported from: go.owl
database_cross_reference: Wikipedia:Transduction_(genetics)
has_obo_namespace: biological_process
id: GO:0009293
in_subset: gosubset prok

DNA mediated transformation
type: Class
subclass of: genetic transfer
definition: The introduction and uptake of foreign genetic material (DNA or RNA) into a cell, and often the expression of that genetic material.
imported from: go.owl
has_exact_synonym: DNA-mediated transformation
has_obo_namespace: biological_process
id: GO:0009294
in_subset: gosubset prok

quorum sensing
type: Class
subclass of: homeostasis of number of cells in a free-living population
definition: The process in which single-celled organisms monitor their population density by detecting the concentration of small, diffusible signal molecules produced by the cells themselves.
imported from: go.owl
database_cross_reference: Wikipedia:Quorum_sensing
has_exact_synonym: quorum sensing system
has_obo_namespace: biological_process
id: GO:0009372
in_subset: goslim pir
in_subset: gosubset prok

pathogenesis
type: Class
subclass of: multi-organism process
definition: The set of specific processes that generate the ability of an organism to cause disease in another.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: channel-forming toxin activity
has_related_synonym: cytotoxin activity
has_related_synonym: endotoxin activity
has_related_synonym: enterotoxin activity
has_related_synonym: exotoxin activity
has_related_synonym: lipoprotein toxin
has_related_synonym: neurotoxin activity
has_related_synonym: pore-forming toxin activity
has_related_synonym: toxin activity
has_related_synonym: virulence
id: GO:0009405
in_subset: goslim aspergillus
in_subset: goslim candida
in_subset: goslim metagenomics
in_subset: gosubset prok
comment: Note that this term should not be used to annotate gene products that are involved in the host response to pathogenesis. It should only be used to annotate those gene products involved in the generation of pathogenesis by the pathogen itself.

detection of virus
type: Class
subclass of: response to virus
definition: The series of events in which a stimulus from a virus is received and converted into a molecular signal.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: perception of virus
id: GO:0009597
in_subset: gosubset prok
comment: GO:0009597 is not a child term of 'detection of symbiont ; GO:0009602' to allow annotation of a virus responding to another (often competing) virus.

detection of nematode
type: Class
subclass of: response to nematode
subclass of: detection of other organism
definition: The series of events in which a stimulus from a nematode is received and converted into a molecular signal.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: perception of nematode
id: GO:0009600

detection of insect
type: Class
subclass of: response to insect
subclass of: detection of other organism
definition: The series of events in which a stimulus from an insect is received and converted into a molecular signal.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: perception of insect
id: GO:0009601

detection of symbiont
type: Class
subclass of: response to symbiont
subclass of: detection of other organism
definition: The series of events in which a stimulus from a symbiont (an organism living in close physical association with an organism of a different species) is received and converted into a molecular signal. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: perception of symbiont
id: GO:0009602

detection of symbiotic fungus
type: Class
subclass of: detection of symbiont
subclass of: response to symbiotic fungus
subclass of: detection of fungus
definition: The series of events in which a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism, is received and converted into a molecular signal.
imported from: go.owl
has_exact_synonym: detection of symbiotic fungi
has_obo_namespace: biological_process
has_related_synonym: perception of symbiotic fungi
has_related_synonym: perception of symbiotic fungus
id: GO:0009603

detection of symbiotic bacterium
type: Class
subclass of: detection of symbiont
subclass of: response to symbiotic bacterium
subclass of: detection of bacterium
definition: The series of events in which a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism, is received and converted into a molecular signal.
imported from: go.owl
has_exact_synonym: detection of symbiotic bacteria
has_obo_namespace: biological_process
has_related_synonym: perception of symbiotic bacteria
has_related_synonym: perception of symbiotic bacterium
id: GO:0009604

response to symbiont
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiont, an organism living with an organism of a different species in close physical association. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response of host to symbiont
id: GO:0009608

response to symbiotic bacterium
type: Class
subclass of: response to symbiont
subclass of: response to bacterium
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism.
imported from: go.owl
has_exact_synonym: response to symbiotic bacteria
has_obo_namespace: biological_process
id: GO:0009609

response to symbiotic fungus
type: Class
subclass of: response to symbiont
subclass of: response to fungus
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism.
imported from: go.owl
has_exact_synonym: response to symbiotic fungi
has_obo_namespace: biological_process
id: GO:0009610

response to virus
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
imported from: go.owl
has_exact_synonym: response to viruses
has_obo_namespace: biological_process
id: GO:0009615
in_subset: gosubset prok

virus induced gene silencing
type: Class
subclass of: defense response to virus
subclass of: modulation by symbiont of RNA levels in host
subclass of: cellular response to virus
definition: Specific posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes. This silencing is triggered by viral infection, and occurs through a specific decrease in the level of mRNA of both host and viral genes.
imported from: go.owl
has_exact_synonym: VIGS
has_exact_synonym: virus-induced gene silencing
has_obo_namespace: biological_process
id: GO:0009616

response to bacterium
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
imported from: go.owl
has_alternative_id: GO:0009618
has_alternative_id: GO:0009680
has_exact_synonym: response to bacteria
has_obo_namespace: biological_process
id: GO:0009617
in_subset: gosubset prok

response to fungus
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.
imported from: go.owl
has_alternative_id: GO:0009621
has_exact_synonym: response to fungi
has_obo_namespace: biological_process
id: GO:0009620

response to parasitic fungus
type: Class
subclass of: response to symbiotic fungus
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a parasitic fungus, a fungus which spends all or part of its life in or on another organism from which it obtains nourishment and/or protection.
imported from: go.owl
has_exact_synonym: response to parasitic fungi
has_obo_namespace: biological_process
id: GO:0009623

response to nematode
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.
imported from: go.owl
has_exact_synonym: response to nematodes
has_obo_namespace: biological_process
id: GO:0009624

response to insect
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.
imported from: go.owl
has_alternative_id: GO:0043019
has_exact_synonym: response to insects
has_obo_namespace: biological_process
id: GO:0009625

systemic acquired resistance
type: Class
subclass of: defense response, incompatible interaction
definition: The salicylic acid mediated response to a pathogen which confers broad spectrum resistance.
imported from: go.owl
database_cross_reference: Wikipedia:Systemic_acquired_resistance
has_exact_synonym: salicylic acid-dependent systemic resistance
has_obo_namespace: biological_process
id: GO:0009627

induced systemic resistance
type: Class
subclass of: defense response to bacterium
definition: A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0009682

induction of phytoalexin biosynthetic process
type: Class
subclass of: defense response, incompatible interaction
definition: The activation of the chemical reactions and pathways resulting in the formation of phytoalexins, low-molecular mass, lipophilic antimicrobial compounds that accumulate rapidly at sites of incompatible pathogen infection.
imported from: go.owl
has_exact_synonym: induction of phytoalexin anabolism
has_exact_synonym: induction of phytoalexin biosynthesis
has_exact_synonym: induction of phytoalexin formation
has_exact_synonym: induction of phytoalexin synthesis
has_obo_namespace: biological_process
id: GO:0009689

defense response, incompatible interaction
type: Class
subclass of: defense response to other organism
definition: A response of a plant to a pathogenic agent that prevents the occurrence or spread of disease.
imported from: go.owl
has_exact_synonym: defence response incompatible interaction
has_exact_synonym: defence response to pathogen, incompatible interaction
has_exact_synonym: resistance response to pathogen
has_exact_synonym: response to pathogen (incompatible interaction)
has_obo_namespace: biological_process
id: GO:0009814

defense response to bacterium, incompatible interaction
type: Class
subclass of: defense response, incompatible interaction
subclass of: defense response to bacterium
definition: A response of an organism to a bacterium that prevents the occurrence or spread of disease.
imported from: go.owl
has_exact_synonym: defence response to bacterium, incompatible interaction
has_exact_synonym: defence response to pathogenic bacteria, incompatible interaction
has_exact_synonym: defence response to pathogenic bacterium, incompatible interaction
has_exact_synonym: resistance response to pathogenic bacteria
has_exact_synonym: resistance response to pathogenic bacterium
has_exact_synonym: response to pathogenic bacteria (incompatible interaction)
has_exact_synonym: response to pathogenic bacterium (incompatible interaction)
has_obo_namespace: biological_process
id: GO:0009816

defense response to fungus, incompatible interaction
type: Class
subclass of: defense response, incompatible interaction
subclass of: defense response to fungus
definition: A response of an organism to a fungus that prevents the occurrence or spread of disease.
imported from: go.owl
has_exact_synonym: defence response to fungus, incompatible interaction
has_exact_synonym: defence response to pathogenic fungi, incompatible interaction
has_exact_synonym: defence response to pathogenic fungus, incompatible interaction
has_exact_synonym: defense response to fungi, incompatible interaction
has_exact_synonym: resistance response to pathogenic fungi
has_exact_synonym: resistance response to pathogenic fungus
has_exact_synonym: response to pathogenic fungi (incompatible interaction)
has_exact_synonym: response to pathogenic fungus (incompatible interaction)
has_obo_namespace: biological_process
id: GO:0009817

defense response to protozoan, incompatible interaction
type: Class
subclass of: defense response, incompatible interaction
subclass of: defense response to protozoan
definition: A response of an organism to a protozoan that prevents the occurrence or spread of disease.
imported from: go.owl
has_exact_synonym: defence response to pathogenic protozoa, incompatible interaction
has_exact_synonym: defence response to pathogenic protozoan, incompatible interaction
has_exact_synonym: defence response to protozoan, incompatible interaction
has_exact_synonym: resistance response to pathogenic protozoa
has_exact_synonym: resistance response to pathogenic protozoan
has_exact_synonym: response to pathogenic protozoa (incompatible interaction)
has_exact_synonym: response to pathogenic protozoan (incompatible interaction)
has_obo_namespace: biological_process
id: GO:0009818

pollination
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: The cascade of biological processes occurring in plants beginning when the pollen lands on the stigma and continuing up to, but not including, fertilization, as defined by sperm-central cell fusion.
imported from: go.owl
database_cross_reference: Wikipedia:Pollination
has_obo_namespace: biological_process
id: GO:0009856
in_subset: goslim plant

jasmonic acid and ethylene-dependent systemic resistance
type: Class
subclass of: defense response, incompatible interaction
definition: The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.
imported from: go.owl
has_exact_synonym: jasmonic acid and ethene-dependent systemic resistance
has_exact_synonym: jasmonic acid/ethylene-dependent systemic resistance
has_obo_namespace: biological_process
id: GO:0009861

nodulation
type: Class
subclass of: symbiosis, encompassing mutualism through parasitism
definition: The formation of nitrogen-fixing root nodules on plant roots.
imported from: go.owl
has_exact_synonym: nodule development
has_exact_synonym: nodule formation
has_obo_namespace: biological_process
id: GO:0009877

nodule morphogenesis
type: Class
subclass of: development involved in symbiotic interaction
definition: The process in which the anatomical structures of the nodule are generated and organized.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0009878

pollen tube reception
type: Class
subclass of: intraspecies interaction between organisms
definition: Interaction between the pollen tube, part of the male gametophyte, and the ovule, part of the female gametophyte, that results in the arrest of pollen tube growth, rupture of the pollen tube and the release of the sperm cells.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0010483

viral process
type: Class
subclass of: symbiosis, encompassing mutualism through parasitism
subclass of: multi-organism cellular process
definition: A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
imported from: go.owl
has_alternative_id: GO:0022415
database_cross_reference: Reactome:REACT_6145
database_cross_reference: Reactome:REACT_6185
database_cross_reference: Reactome:REACT_6256
database_cross_reference: Wikipedia:Viral_life_cycle
has_exact_synonym: virus process
has_obo_namespace: biological_process
has_related_synonym: viral infection
has_related_synonym: virulence
id: GO:0016032
in_subset: goslim metagenomics
in_subset: goslim pir
in_subset: goslim virus
comment: See also the biological process terms 'viral infectious cycle ; GO:0019058' and 'lysogeny ; GO:0030069'.

detection of bacterium
type: Class
subclass of: response to bacterium
subclass of: detection of other organism
definition: The series of events in which a stimulus from a bacterium is received and converted into a molecular signal.
imported from: go.owl
has_alternative_id: GO:0009598
has_alternative_id: GO:0009681
has_exact_synonym: detection of bacteria
has_obo_namespace: biological_process
has_related_synonym: perception of bacteria
has_related_synonym: perception of bacterium
id: GO:0016045

detection of fungus
type: Class
subclass of: response to fungus
subclass of: detection of other organism
definition: The series of events in which a stimulus from a fungus is received and converted into a molecular signal.
imported from: go.owl
has_alternative_id: GO:0009599
has_exact_synonym: detection of fungi
has_obo_namespace: biological_process
has_related_synonym: perception of fungi
has_related_synonym: perception of fungus
id: GO:0016046

detection of parasitic fungus
type: Class
subclass of: detection of symbiotic fungus
subclass of: response to parasitic fungus
definition: The series of events in which a stimulus from a parasitic fungus (a fungus which spends all or part of its life in or on another organism from which it obtains nourishment and/or protection) is received and converted into a molecular signal.
imported from: go.owl
has_exact_synonym: detection of parasitic fungi
has_obo_namespace: biological_process
has_related_synonym: perception of parasitic fungi
has_related_synonym: perception of parasitic fungus
id: GO:0016047

male courtship behavior, orientation prior to leg tapping and wing vibration
type: Class
subclass of: male courtship behavior
definition: The process during courtship, where the male orients towards a potential partner. An example of this is found in Drosophila melanogaster.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: male courtship behavior, orientation
has_related_synonym: male courtship behaviour, orientation
has_related_synonym: male courtship behaviour, orientation prior to leg tapping and wing vibration
id: GO:0016543

male courtship behavior, tapping to detect pheromone
type: Class
subclass of: male courtship behavior
definition: The process during courtship where the male insect taps the female with his frontal leg. An example of this is found in Drosophila melanogaster.
imported from: go.owl
has_exact_synonym: male courtship behaviour, tapping
has_obo_namespace: biological_process
has_related_synonym: male courtship behavior, tapping
has_related_synonym: male courtship behaviour, tapping to detect pheromone
id: GO:0016544

male courtship behavior, veined wing vibration
type: Class
subclass of: male courtship behavior, veined wing extension
definition: The process during courtship where the male insect vibrates his wings. An example of this is found in Drosophila melanogaster.
imported from: go.owl
has_exact_synonym: male courtship behaviour, veined wing vibration
has_obo_namespace: biological_process
has_related_synonym: male courtship behavior, wing vibration
has_related_synonym: male courtship behaviour, wing vibration
id: GO:0016545

male courtship behavior, proboscis-mediated licking
type: Class
subclass of: male courtship behavior
definition: The process during courtship where the male fly licks the genitalia of a stationary female fly with his proboscis. An example of this is found in Drosophila melanogaster.
imported from: go.owl
has_exact_synonym: male courtship behaviour, proboscis-mediated licking
has_obo_namespace: biological_process
has_related_synonym: male courtship behavior, licking
has_related_synonym: male courtship behaviour, licking
id: GO:0016546

oviposition
type: Class
subclass of: multicellular organismal reproductive behavior
definition: The deposition of eggs (either fertilized or not) upon a surface or into a medium such as water.
imported from: go.owl
has_broad_synonym: egg laying
has_broad_synonym: egg-laying
database_cross_reference: Wikipedia:Oviposition
has_obo_namespace: biological_process
id: GO:0018991

viral latency
type: Class
subclass of: viral process
definition: The process by which, after initial infection, a virus lies dormant within a cell and viral production ceases. The process ends when the virus switches from latency and starts to replicate.
imported from: go.owl
has_alternative_id: GO:0030069
has_alternative_id: GO:0075710
has_exact_synonym: latent virus infection
has_exact_synonym: phage lysogeny
has_exact_synonym: viral dormancy
has_obo_namespace: biological_process
id: GO:0019042

establishment of viral latency
type: Class
subclass of: viral process
definition: A process by which a virus establishes a latent state within its host, either as an integrated provirus within the host genome or as an episome, where viral genome remains in the cytoplasm or nucleus as distinct objects.
imported from: go.owl
has_alternative_id: GO:0075601
database_cross_reference: PHI:0000007
has_exact_synonym: lysogenic commitment
has_narrow_synonym: phage lysogeny
has_obo_namespace: biological_process
id: GO:0019043
in_subset: virus checked

maintenance of viral latency
type: Class
subclass of: viral process
definition: The perpetuation of a latent state, generally by repressing the viruses own lytic genes expression and ensuring expression of viral genes which function to keep the viral genome from being detected by the host defense mechanisms.
imported from: go.owl
has_alternative_id: GO:0032360
has_alternative_id: GO:0075716
has_exact_synonym: latent virus maintenance
has_exact_synonym: prophage maintenance
has_exact_synonym: provirus maintenance
has_obo_namespace: biological_process
id: GO:0019044
in_subset: virus checked

latent virus replication
type: Class
subclass of: viral process
definition: Any process required for latent viral replication in a cell.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0019045

release from viral latency
type: Class
subclass of: viral process
definition: The process by which a virus switches from latency and begins to replicate. It may be effected by various endogenous and exogenous stimuli, including B-cell lipopolysaccharides, glucocorticoid hormones, halogenated pyrimidines, ionizing radiation, ultraviolet light, various chemicals and super-infecting viruses.
imported from: go.owl
has_alternative_id: GO:0075717
database_cross_reference: PHI:0000062
has_exact_synonym: exit from viral latency
has_exact_synonym: lytic switch
has_exact_synonym: proviral induction
has_exact_synonym: proviral switch
has_exact_synonym: reactivation of latent virus
has_exact_synonym: virus activation
has_narrow_synonym: prophage induction
has_obo_namespace: biological_process
id: GO:0019046

modulation by virus of host morphology or physiology
type: Class
subclass of: viral process
subclass of: modification by symbiont of host morphology or physiology
definition: The process in which a virus effects a change in the structure or processes of its host organism.
imported from: go.owl
has_alternative_id: GO:0044792
has_broad_synonym: virus-host interaction
database_cross_reference: Reactome:REACT_6323
database_cross_reference: VZ:886
has_exact_synonym: host-virus interaction
has_exact_synonym: modulation by virus of host anatomical structure or process
has_exact_synonym: modulation by virus of host anatomy or process
has_exact_synonym: viral interaction with host
has_exact_synonym: viral-host process
has_exact_synonym: virus-host process
has_obo_namespace: biological_process
id: GO:0019048
in_subset: goslim virus
in_subset: virus checked

evasion or tolerance of host defenses by virus
type: Class
subclass of: modulation by virus of host morphology or physiology
subclass of: evasion or tolerance of host defenses
definition: Any process, either active or passive, by which a virus avoids or tolerates the effects of its host organism's defense(s). Host defenses may be induced by the presence of the virus or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: evasion of host defenses by virus
has_narrow_synonym: viral host defence evasion
has_narrow_synonym: viral host defense evasion
has_obo_namespace: biological_process
id: GO:0019049

suppression by virus of host apoptotic process
type: Class
subclass of: negative regulation by symbiont of host apoptotic process
subclass of: modulation by virus of host apoptotic process
definition: Any viral process that inhibits apoptosis of infected host cells, facilitating prolonged cell survival during viral replication.
imported from: go.owl
has_exact_synonym: negative regulation by virus of host apoptosis
has_exact_synonym: negative regulation of apoptosis by virus
has_exact_synonym: suppression by virus of host apoptosis
has_exact_synonym: suppression of apoptosis in host by virus
has_obo_namespace: biological_process
id: GO:0019050

induction by virus of host apoptotic process
type: Class
subclass of: modulation by virus of host apoptotic process
subclass of: positive regulation of apoptotic process by virus
definition: The set of viral processes that induce an apoptotic process in infected host cells, facilitating release and spread of progeny virions.
imported from: go.owl
has_exact_synonym: activation by virus of host apoptosis
has_exact_synonym: activation by virus of host apoptotic programmed cell death
has_exact_synonym: activation of apoptosis in host by virus
has_exact_synonym: induction by virus of host apoptotic programmed cell death
has_exact_synonym: induction of apoptosis in host by virus
has_narrow_synonym: induction by virus of host apoptosis
has_obo_namespace: biological_process
id: GO:0019051

modulation by virus of host process
type: Class
subclass of: modulation by virus of host morphology or physiology
subclass of: modulation by symbiont of host cellular process
definition: The process in which a virus effects a change in the processes and activities of its host organism.
imported from: go.owl
database_cross_reference: Reactome:REACT_6222
has_exact_synonym: modification by virus of host cellular process
has_exact_synonym: regulation by virus of host cellular process
has_exact_synonym: regulation of cellular process in host by virus
has_exact_synonym: regulation of host cellular process by virus
has_exact_synonym: viral host cell process manipulation
has_obo_namespace: biological_process
has_related_synonym: modulation of cellular process in host by virus
id: GO:0019054
in_subset: virus checked

modification by virus of host cell cycle regulation
type: Class
subclass of: modulation by virus of host process
definition: Interactions, directly with the host cell macromolecular machinery, to allow a virus to modulate the rate of the host cell cycle to facilitate virus replication.
imported from: go.owl
has_exact_synonym: viral perturbation of cell cycle regulation
has_obo_namespace: biological_process
id: GO:0019055

modulation by virus of host transcription
type: Class
subclass of: modulation by virus of host gene expression
subclass of: modulation by symbiont of host transcription
definition: Any process in which a virus modulates the frequency, rate or extent of its host's transcription.
imported from: go.owl
has_exact_synonym: modification by virus of host transcription
has_exact_synonym: viral perturbation of host cell transcription
has_obo_namespace: biological_process
id: GO:0019056
in_subset: goslim virus

modulation by virus of host translation
type: Class
subclass of: modulation by virus of host gene expression
subclass of: modulation by symbiont of host translation
definition: Any process in which a virus modulates the frequency, rate or extent of translation of host mRNA.
imported from: go.owl
has_broad_synonym: host cell protein synthesis shutoff
has_broad_synonym: host cell shutoff
has_exact_synonym: modification by virus of host cell mRNA translation
has_exact_synonym: modulation of host translation by virus
has_exact_synonym: regulation of host mRNA translation by virus
has_exact_synonym: regulation of host translation by virus
has_exact_synonym: regulation of translation in host by virus
has_exact_synonym: viral perturbation of host cell mRNA translation
has_obo_namespace: biological_process
has_related_synonym: viral host shutoff protein
id: GO:0019057
in_subset: goslim virus

viral life cycle
type: Class
subclass of: viral process
definition: A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
imported from: go.owl
has_alternative_id: GO:0019067
database_cross_reference: Reactome:REACT_6167
database_cross_reference: Reactome:REACT_6270
has_narrow_synonym: viral assembly, maturation, egress, and release
has_obo_namespace: biological_process
has_related_synonym: lytic viral life cycle
has_related_synonym: viral infectious cycle
has_related_synonym: viral replication
id: GO:0019058

intracellular transport of viral protein in host cell
type: Class
subclass of: symbiont intracellular protein transport in host
subclass of: intracellular transport of virus
definition: The directed movement of a viral protein within the host cell.
imported from: go.owl
has_alternative_id: GO:0046742
has_alternative_id: GO:0046743
has_alternative_id: GO:0046801
database_cross_reference: Reactome:REACT_6215
database_cross_reference: Reactome:REACT_6225
database_cross_reference: Reactome:REACT_6273
database_cross_reference: Reactome:REACT_6309
has_exact_synonym: cytoplasmic viral capsid transport
has_exact_synonym: intracellular transport of viral capsid protein in host cell
has_exact_synonym: intracellular transport of viral proteins in host cell
has_exact_synonym: intracellular viral capsid transport
has_exact_synonym: intracellular viral protein transport
has_exact_synonym: nuclear viral capsid transport
has_exact_synonym: viral capsid transport in host cell cytoplasm
has_exact_synonym: viral capsid transport in host cell nucleus
has_obo_namespace: biological_process
has_related_synonym: intracellular transport of viral capsid in host cell
id: GO:0019060
in_subset: virus checked
comment: This term is for annotation of the movement of individual viral proteins, rather than the whole viral particle.

uncoating of virus
type: Class
subclass of: viral process
definition: The process by which an incoming virus is disassembled in the host cell to release a replication-competent viral genome.
imported from: go.owl
database_cross_reference: Reactome:REACT_6230
database_cross_reference: Reactome:REACT_6315
database_cross_reference: Reactome:REACT_6321
database_cross_reference: Reactome:REACT_6965
has_exact_synonym: viral uncoating
has_obo_namespace: biological_process
id: GO:0019061
in_subset: virus checked

virion attachment to host cell
type: Class
subclass of: adhesion of symbiont to host cell
definition: The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
imported from: go.owl
database_cross_reference: VZ:956
has_exact_synonym: viral absorption
has_narrow_synonym: virion attachment to host cell surface receptor
has_obo_namespace: biological_process
has_related_synonym: viral attachment to host cell
id: GO:0019062
in_subset: goslim virus
in_subset: virus checked

fusion of virus membrane with host plasma membrane
type: Class
subclass of: membrane fusion involved in viral entry into host cell
definition: Fusion of a viral membrane with the host cell membrane during viral entry. Results in release of the virion contents into the cytoplasm.
imported from: go.owl
has_alternative_id: GO:0075706
has_broad_synonym: viral envelope fusion
database_cross_reference: Reactome:REACT_6176
database_cross_reference: Reactome:REACT_6180
database_cross_reference: Reactome:REACT_6351
database_cross_reference: Reactome:REACT_8032
database_cross_reference: VZ:987
has_exact_synonym: viral envelope fusion with host cell membrane
has_exact_synonym: viral envelope fusion with host membrane
has_exact_synonym: viral envelope fusion with host plasma membrane
has_exact_synonym: viral penetration via membrane fusion
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via membrane fusion with the plasma membrane
has_related_synonym: viral-cell fusion molecule activity
id: GO:0019064
in_subset: virus checked

receptor-mediated endocytosis of virus by host cell
type: Class
subclass of: endocytosis involved in viral entry into host cell
definition: Any receptor-mediated endocytosis that is involved in the uptake of a virus into a host cell; successive instances of virus endocytosis result in the accumulation of virus particles within the cell.
imported from: go.owl
database_cross_reference: Reactome:REACT_6147
database_cross_reference: Reactome:REACT_6262
has_exact_synonym: receptor mediated endocytosis by host of virus particle
has_exact_synonym: receptor mediated endocytosis of virus by host
has_exact_synonym: receptor mediated endocytosis of virus particle by host
has_exact_synonym: receptor-mediated endocytosis of virus by host
has_exact_synonym: viral receptor mediated endocytosis
has_exact_synonym: virus receptor-mediated endocytosis by host
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via receptor-mediated endocytosis
id: GO:0019065
in_subset: virus checked

virion assembly
type: Class
subclass of: viral process
definition: A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.
imported from: go.owl
has_alternative_id: GO:0042963
database_cross_reference: Reactome:REACT_6137
database_cross_reference: Reactome:REACT_6146
database_cross_reference: Reactome:REACT_6212
database_cross_reference: Reactome:REACT_6271
database_cross_reference: Reactome:REACT_6277
has_exact_synonym: viral assembly
has_exact_synonym: viral particle assembly
has_exact_synonym: virion assembly and maintenance
has_exact_synonym: virion organization
has_exact_synonym: virus assembly
has_exact_synonym: virus particle assembly
has_narrow_synonym: bacteriophage assembly
has_narrow_synonym: phage assembly
has_obo_namespace: biological_process
id: GO:0019068
in_subset: goslim virus
in_subset: virus checked

viral capsid assembly
type: Class
subclass of: viral process
definition: The assembly of a virus capsid from its protein subunits.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0019069
in_subset: goslim virus

viral genome maturation
type: Class
subclass of: viral process
definition: The processes involved in creating a mature, stable viral genome. Begins after genome replication with a newly synthesized nucleic acid and ends when the genome is ready to be packaged. Includes the addition of proteins to the newly synthesized genome, and DNA repair processes.
imported from: go.owl
database_cross_reference: Reactome:REACT_6198
has_obo_namespace: biological_process
id: GO:0019070

viral genome packaging
type: Class
subclass of: viral process
definition: The encapsulation of the viral genome within the capsid.
imported from: go.owl
database_cross_reference: Reactome:REACT_6235
database_cross_reference: Reactome:REACT_6336
has_obo_namespace: biological_process
id: GO:0019072
in_subset: goslim virus
in_subset: virus checked

viral DNA genome packaging
type: Class
subclass of: viral genome packaging
subclass of: multi-organism metabolic process
definition: The packing of viral DNA into a capsid.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0019073
in_subset: virus checked

viral RNA genome packaging
type: Class
subclass of: viral genome packaging
definition: The packaging of viral RNA (single-stranded or double-stranded) into a nucleocapsid.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0019074

virus maturation
type: Class
subclass of: viral process
definition: The refolding and structural rearrangements of virion parts to transition from the intermediate virion to the more mature virion. Maturation usually involves proteolysis events and changes in the folding of the virion proteins. Can occur inside the host cell or after release.
imported from: go.owl
database_cross_reference: VZ:1946
has_exact_synonym: viral maturation
has_exact_synonym: viral particle maturation
has_exact_synonym: virion maturation
has_narrow_synonym: bacteriophage maturation
has_obo_namespace: biological_process
has_related_synonym: virus particle maturation
id: GO:0019075

viral release from host cell
type: Class
subclass of: viral process
definition: The dissemination of mature viral particles from the host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.
imported from: go.owl
database_cross_reference: Reactome:REACT_6326
database_cross_reference: Reactome:REACT_6348
database_cross_reference: VZ:1076
has_exact_synonym: release of virus from host
has_exact_synonym: viral exit
has_exact_synonym: viral release
has_exact_synonym: viral shedding
has_exact_synonym: virus exit from host cell
has_obo_namespace: biological_process
id: GO:0019076
in_subset: goslim virus
in_subset: virus checked

viral genome replication
type: Class
subclass of: viral process
definition: Any process involved directly in viral genome replication, including viral nucleotide metabolism.
imported from: go.owl
has_broad_synonym: viral replication
has_narrow_synonym: sigma virus replication
has_obo_namespace: biological_process
id: GO:0019079
in_subset: goslim virus

viral gene expression
type: Class
subclass of: viral process
subclass of: multi-organism metabolic process
definition: A process by which a viral gene is converted into a mature gene product or products (proteins or RNA). This includes viral transcription, processing to produce a mature RNA product, and viral translation.
imported from: go.owl
has_exact_synonym: viral genome expression
has_obo_namespace: biological_process
id: GO:0019080
in_subset: virus checked

transformation of host cell by virus
type: Class
subclass of: modulation by virus of host morphology or physiology
definition: Any virus-induced change in the morphological, biochemical, or growth parameters of a cell.
imported from: go.owl
database_cross_reference: Wikipedia:Viral_transformation
has_exact_synonym: viral transformation
has_exact_synonym: viral transformation of host cell
has_obo_namespace: biological_process
id: GO:0019087

immortalization of host cell by virus
type: Class
subclass of: transformation of host cell by virus
subclass of: immortalization of host cell
definition: A virus-induced cellular transformation arising in immortalized cells, or cells capable of indefinite replication, due to their ability to produce their own telomerase.
imported from: go.owl
has_exact_synonym: viral immortalization
has_obo_namespace: biological_process
id: GO:0019088

transmission of virus
type: Class
subclass of: viral process
subclass of: dissemination or transmission of symbiont from host
definition: The transfer of virions in order to create new infection.
imported from: go.owl
has_exact_synonym: viral transmission
has_obo_namespace: biological_process
id: GO:0019089

antimicrobial humoral response
type: Class
subclass of: response to other organism
definition: An immune response against microbes mediated through a body fluid. Examples of this process are seen in the antimicrobial humoral response of Drosophila melanogaster and Mus musculus.
imported from: go.owl
has_alternative_id: GO:0006960
has_alternative_id: GO:0019735
has_obo_namespace: biological_process
id: GO:0019730

antibacterial humoral response
type: Class
subclass of: antimicrobial humoral response
subclass of: defense response to bacterium
definition: An immune response against bacteria mediated through a body fluid. Examples of this process are the antibacterial humoral responses in Mus musculus and Drosophila melanogaster.
imported from: go.owl
has_alternative_id: GO:0006961
has_alternative_id: GO:0019733
has_obo_namespace: biological_process
id: GO:0019731

antifungal humoral response
type: Class
subclass of: antimicrobial humoral response
subclass of: defense response to fungus
definition: An immune response against a fungus mediated through a body fluid. An example of this process is the antifungal humoral response in Drosophila melanogaster.
imported from: go.owl
has_alternative_id: GO:0006966
has_alternative_id: GO:0019734
has_obo_namespace: biological_process
id: GO:0019732

hemolysis by symbiont of host erythrocytes
type: Class
subclass of: cytolysis by symbiont of host cells
subclass of: hemolysis in other organism involved in symbiotic interaction
definition: The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in the host organism by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: haemolysis in host
has_exact_synonym: hemolysis by symbiont of host RBCs
has_exact_synonym: hemolysis by symbiont of host red blood cells
has_exact_synonym: regulation of cytolysis of host cells by symbiont
has_obo_namespace: biological_process
has_related_synonym: hemolysin activity
id: GO:0019836
in_subset: gosubset prok

sexual reproduction
type: Class
subclass of: multi-organism reproductive process
definition: A reproduction process that creates a new organism by combining the genetic material of two organisms. It occurs both in eukaryotes and prokaryotes: in multicellular eukaryotic organisms, an individual is created anew; in prokaryotes, the initial cell has additional or transformed genetic material. In a process called genetic recombination, genetic material (DNA) originating from two different individuals (parents) join up so that homologous sequences are aligned with each other, and this is followed by exchange of genetic information. After the new recombinant chromosome is formed, it is passed on to progeny.
imported from: go.owl
database_cross_reference: Wikipedia:Sexual_reproduction
has_obo_namespace: biological_process
id: GO:0019953
comment: Sexual reproduction may be seen as the regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times.

evasion or tolerance of host immune response
type: Class
subclass of: evasion or tolerance of host defense response
subclass of: evasion or tolerance of immune response of other organism involved in symbiotic interaction
subclass of: response to host immune response
definition: Any process, either active or passive, by which an organism avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_broad_synonym: immune evasion
has_obo_namespace: biological_process
id: GO:0020012
in_subset: gosubset prok

modulation by symbiont of host erythrocyte aggregation
type: Class
subclass of: modulation by symbiont of host cellular process
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of erythrocyte aggregation in its host organism, e.g. the binding of parasite-infected erythrocytes to uninfected erythrocytes.
imported from: go.owl
database_cross_reference: Wikipedia:Rosetting
has_exact_synonym: rosetting
has_obo_namespace: biological_process
id: GO:0020013
comment: Please note that this term does not refer to the in vitro assay called erythrocyte rosetting.

immortalization of host cell
type: Class
subclass of: interaction with host
definition: The modification of a host cell into an immortal cell line as a consequence of infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: host cell immortalization
has_exact_synonym: host cell transformation
has_exact_synonym: transformation of host cell
has_obo_namespace: biological_process
id: GO:0020021

antigenic variation
type: Class
subclass of: passive evasion of immune response of other organism involved in symbiotic interaction
definition: Any process involved in the biological strategy of changing antigenic determinants on the surface that are exposed to another organism's immune system.
imported from: go.owl
has_alternative_id: GO:0020034
database_cross_reference: Wikipedia:Antigenic_variation
has_narrow_synonym: surface antigen variation
has_obo_namespace: biological_process
id: GO:0020033
in_subset: gosubset prok

cytoadherence to microvasculature, mediated by symbiont protein
type: Class
subclass of: adhesion to host
definition: The adherence of symbiont-infected erythrocytes to microvascular endothelium via symbiont proteins embedded in the membrane of the erythrocyte.
imported from: go.owl
has_broad_synonym: cytoadherence to microvasculature, mediated by symbiont protein
has_broad_synonym: symbiont-protein-mediated cytoadherence to microvasculature
has_exact_synonym: parasite-protein-mediated cytoadherence to microvasculature
has_narrow_synonym: cytoadherence to microvasculature, mediated by parasite protein
has_obo_namespace: biological_process
id: GO:0020035

entry into host cell
type: Class
subclass of: entry into host
definition: The invasion by an organism of a cell of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
database_cross_reference: Reactome:REACT_6903
has_exact_synonym: host cell invasion
has_obo_namespace: biological_process
id: GO:0030260
in_subset: gosubset prok

symbiont intracellular protein transport in host
type: Class
subclass of: interaction with host
subclass of: intracellular protein transport in other organism involved in symbiotic interaction
definition: The directed movement of a symbiont's proteins within a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: host cell protein transport
has_exact_synonym: intracellular protein transport in host
has_obo_namespace: biological_process
id: GO:0030581

evasion or tolerance of host defense response
type: Class
subclass of: evasion or tolerance of host defenses
subclass of: evasion or tolerance of defense response of other organism involved in symbiotic interaction
definition: Any process, either active or passive, by which an organism avoids or tolerates the effects of its host organism's defense response. The host defense response is mounted by the host in response to the presence of the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: evasion of host defence response
has_obo_namespace: biological_process
id: GO:0030682
in_subset: gosubset prok

evasion or tolerance by virus of host immune response
type: Class
subclass of: evasion or tolerance of host defenses by virus
subclass of: evasion or tolerance of host immune response
definition: Any process, either active or passive, by which a virus avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_alternative_id: GO:0019052
has_alternative_id: GO:0019053
database_cross_reference: Reactome:REACT_6186
database_cross_reference: Reactome:REACT_6301
database_cross_reference: Reactome:REACT_6320
database_cross_reference: Reactome:REACT_6339
database_cross_reference: Reactome:REACT_6350
has_exact_synonym: inhibition of extracellular antiviral response
has_exact_synonym: negative regulation by virus of extracellular antiviral response
has_exact_synonym: negative regulation by virus of intracellular antiviral response
has_exact_synonym: negative regulation of host extracellular antiviral response by virus
has_exact_synonym: negative regulation of host intracellular antiviral response by virus
has_exact_synonym: suppression by virus of host extracellular antiviral response
has_exact_synonym: suppression by virus of host intracellular antiviral response
has_exact_synonym: suppression of host extracellular antiviral response by virus
has_exact_synonym: suppression of host intracellular antiviral response by virus
has_exact_synonym: viral inhibition of intracellular antiviral response
has_narrow_synonym: evasion by virus of host immune response
has_narrow_synonym: suppression by virus of host immune response
has_obo_namespace: biological_process
id: GO:0030683
in_subset: goslim virus

killing of cells of other organism
type: Class
subclass of: disruption of cells of other organism
definition: Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.
imported from: go.owl
has_alternative_id: GO:0001908
has_exact_synonym: killing of cells of another organism
has_narrow_synonym: killing of cells of another, non-host, organism
has_obo_namespace: biological_process
id: GO:0031640
in_subset: goslim pir
in_subset: gosubset prok

multicellular pellicle formation
type: Class
subclass of: biofilm formation
definition: A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0032022

flocculation via extracellular polymer
type: Class
subclass of: flocculation
definition: Non-sexual aggregation of single-celled organisms mediated by polymers (polysaccharides, proteins, and/or nucleic acids) secreted into the extracellular environment.
imported from: go.owl
has_exact_synonym: flocculation via EBF
has_exact_synonym: flocculation via extracellular biopolymeric flocculants
has_obo_namespace: biological_process
id: GO:0032128
in_subset: gosubset prok

provirus excision
type: Class
subclass of: release from viral latency
definition: The molecular events that lead to the excision of a viral genome from the host genome.
imported from: go.owl
has_exact_synonym: prophage excision
has_obo_namespace: biological_process
id: GO:0032359

multicellular organismal reproductive behavior
type: Class
subclass of: multi-organism reproductive behavior
subclass of: multi-multicellular organism process
definition: The specific behavior of an organism that is associated with reproduction in a multicellular organism.
imported from: go.owl
has_exact_synonym: reproductive behavior in a multicellular organism
has_obo_namespace: biological_process
id: GO:0033057

modulation by symbiont of host response to abiotic stimulus
type: Class
subclass of: modification by symbiont of host morphology or physiology
definition: Any process in which an organism modulates a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033635

modulation by symbiont of host response to temperature stimulus
type: Class
subclass of: modulation by symbiont of host response to abiotic stimulus
definition: Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host response to thermal stimulus
has_obo_namespace: biological_process
id: GO:0033636

modulation by symbiont of host response to cold
type: Class
subclass of: modulation by symbiont of host response to temperature stimulus
definition: Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: freezing tolerance
id: GO:0033637

modulation by symbiont of host response to heat
type: Class
subclass of: modulation by symbiont of host response to temperature stimulus
definition: Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response to heat shock
id: GO:0033638

modulation by symbiont of host response to water
type: Class
subclass of: modulation by symbiont of host response to abiotic stimulus
definition: Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033639

modulation by symbiont of host response to osmotic stress
type: Class
subclass of: modulation by symbiont of host response to abiotic stimulus
definition: Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033640

modulation by symbiont of host response to pH
type: Class
subclass of: modulation by symbiont of host response to abiotic stimulus
definition: Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033641

modulation by symbiont of host response to gravitational stimulus
type: Class
subclass of: modulation by symbiont of host response to abiotic stimulus
definition: Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_broad_synonym: response to gravitational stimulus
has_obo_namespace: biological_process
id: GO:0033642

modification by symbiont of host chloroplast
type: Class
subclass of: modification by symbiont of host cellular component
definition: The process in which an organism effects a change in the structure or function of host cell chloroplasts. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033656

modification by symbiont of host chloroplast part
type: Class
subclass of: modification by symbiont of host chloroplast
definition: The process in which an organism effects a change in the structure or function of a component of the host cell chloroplast. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033657

modification by symbiont of host chloroplast thylakoid
type: Class
subclass of: modification by symbiont of host chloroplast part
definition: The process in which an organism effects a change in the structure or function of the host cell chloroplast thylakoid. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033658

modification by symbiont of host mitochondrion
type: Class
subclass of: modification by symbiont of host cellular component
definition: The process in which an organism effects a change in the structure or function of host cell mitochondria. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033659

negative regulation by symbiont of host resistance gene-dependent defense response
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of host resistance gene-dependent defense response
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of defense response in host by specific elicitors
has_exact_synonym: down-regulation by symbiont of host gene-for-gene resistance
has_exact_synonym: downregulation by symbiont of pathogen-race/host plant cultivar-specific resistance in symbiont
has_exact_synonym: suppression by symbiont of host resistance gene-dependent defense response
has_narrow_synonym: inhibition by symbiont of host resistance gene-dependent defense response
has_obo_namespace: biological_process
id: GO:0033660

negative regulation by symbiont of defense-related host reactive oxygen species production
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of defense-related host reactive oxygen species production
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the production of reactive oxygen species as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by organism of defense-related host metabolic burst
has_exact_synonym: down-regulation by organism of defense-related host oxidative burst
has_exact_synonym: downregulation by organism of defense-related host AOS production
has_exact_synonym: negative regulation by organism of defense-related host ROI production
has_exact_synonym: negative regulation by organism of defense-related host ROS production
has_exact_synonym: negative regulation by organism of defense-related host reactive oxidative species production
has_exact_synonym: negative regulation by organism of defense-related host reactive oxygen intermediate production
has_exact_synonym: negative regulation by organism of defense-related host respiratory burst
has_narrow_synonym: inhibition by organism of defense-related host active oxygen species production
has_obo_namespace: biological_process
id: GO:0033661

modulation by symbiont of host defense-related protein level
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by symbiont of host protein levels
definition: The alternation by a symbiont of the levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033662

negative regulation by symbiont of host defense-related protein level
type: Class
subclass of: modulation by symbiont of host defense-related protein level
subclass of: negative regulation by symbiont of host defense response
definition: Any process in which the symbiont stops or reduces of the levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033663

positive regulation by symbiont of host defense-related protein level
type: Class
subclass of: modulation by symbiont of host defense-related protein level
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which the symbiont activates, maintains or increases levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0033664

negative regulation by symbiont of host apoptotic process
type: Class
subclass of: negative regulation by symbiont of host programmed cell death
subclass of: modulation by symbiont of host apoptotic process
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of programmed cell death in the host, where programmed cell death proceeds by apoptosis. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by organism of host apoptotic programmed cell death
has_exact_synonym: down-regulation by organism of host apoptotic programmed cell death
has_exact_synonym: downregulation by organism of host apoptotic programmed cell death
has_narrow_synonym: inhibition by organism of host apoptotic programmed cell death
has_narrow_synonym: negative regulation by symbiont of host apoptosis
has_obo_namespace: biological_process
id: GO:0033668
comment: Note that term is to be used to annotate gene products in the symbiont. To annotate host gene products, consider the biological process term 'negative regulation of apoptosis ; GO:0043066'.

modulation by symbiont of host defense-related programmed cell death
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by symbiont of host programmed cell death
definition: Any process in which an organism modulates the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host defense-related PCD
has_narrow_synonym: modulation by symbiont of host HR
has_narrow_synonym: modulation by symbiont of host hypersensitive response
has_narrow_synonym: modulation by symbiont of plant HR
has_narrow_synonym: modulation by symbiont of plant hypersensitive response
has_obo_namespace: biological_process
id: GO:0034053
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term 'plant-type hypersensitive response ; GO:0009626'.

negative regulation by symbiont of host defense-related programmed cell death
type: Class
subclass of: modulation by symbiont of host defense-related programmed cell death
subclass of: negative regulation by symbiont of host defense response
subclass of: negative regulation by symbiont of host programmed cell death
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host defense-related programmed cell death
has_exact_synonym: down-regulation by symbiont of host defense-related programmed cell death
has_exact_synonym: downregulation by symbiont of host defense-related programmed cell death
has_exact_synonym: negative regulation by symbiont of host defense-related PCD
has_narrow_synonym: inhibition by symbiont of host defense-related PCD
has_narrow_synonym: inhibition by symbiont of host defense-related programmed cell death
has_narrow_synonym: inhibition of HR
has_narrow_synonym: inhibition of host defense-related PCD
has_narrow_synonym: inhibition of hypersensitive response
has_narrow_synonym: negative regulation by symbiont of plant HR
has_narrow_synonym: negative regulation by symbiont of plant hypersensitive response
has_narrow_synonym: suppression by symbiont of host defense-related programmed cell death
has_narrow_synonym: suppression of HR
has_obo_namespace: biological_process
id: GO:0034054
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term 'negative regulation of plant-type hypersensitive response ; GO:0034051'.

positive regulation by symbiont of host defense-related programmed cell death
type: Class
subclass of: modulation by symbiont of host defense-related programmed cell death
subclass of: positive regulation by symbiont of host programmed cell death
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which an organism activates or increases the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of host defense-related PCD
has_exact_synonym: up regulation by symbiont of host defense-related programmed cell death
has_exact_synonym: up-regulation by symbiont of host defense-related programmed cell death
has_exact_synonym: upregulation by symbiont of host defense-related programmed cell death
has_narrow_synonym: activation by symbiont of host defense-related programmed cell death
has_narrow_synonym: activation of HR
has_narrow_synonym: activation of hypersensitive response
has_narrow_synonym: enhancement by symbiont of host defense-related PCDprogrammed cell death
has_narrow_synonym: positive regulation by symbiont of plant HR
has_narrow_synonym: positive regulation by symbiont of plant hypersensitive response
has_narrow_synonym: stimulation by symbiont of host defense-related programmed cell death
has_obo_namespace: biological_process
id: GO:0034055
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term 'positive regulation of plant-type hypersensitive response ; GO:0034052'.

response to hermaphrodite contact
type: Class
subclass of: male mating behavior
definition: The response by the male to a hermaphrodite after initial contact following mate finding. The male stops forward locomotion, presses the ventral side of his tail against his partner's body, and begins moving backward along the hermaphrodite. Male response behavior is initiated when sensory neurons located in the rays of his tail contact a potential mate.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0034606

turning behavior involved in mating
type: Class
subclass of: male mating behavior
definition: The sharp ventral turn performed by the male as he approaches either the hermaphrodite head or tail, whilst trying to locate his partner's vulva. Turning occurs via a sharp ventral coil of the male's tail.
imported from: go.owl
has_exact_synonym: turning behavior during mating
has_obo_namespace: biological_process
id: GO:0034607

vulval location
type: Class
subclass of: male mating behavior
definition: Location, by the male, of his partner's vulva when backing along the ventral side of the hermaphrodite during mating. The male stops at the vulva, coordinates his movements to the hermaphrodite's, and positions his tail precisely over the vulva so that he may insert his spicules and ejaculate.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0034608

spicule insertion
type: Class
subclass of: male mating behavior
definition: Insertion of the male copulatory spicules into the hermaphrodite. Spicule insertion behavior initiates when the male cloaca contacts the vulva. During most mating encounters, the spicule tips will prod the vulva continuously until they partially penetrate, which then causes the protractors to contract completely so that the spicules extend through the vulva.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0034609

social behavior
type: Class
subclass of: intraspecies interaction between organisms
subclass of: multi-organism behavior
definition: Behavior directed towards society, or taking place between members of the same species. Occurs predominantly, or only, in individuals that are part of a group.
imported from: go.owl
database_cross_reference: Wikipedia:Social_behavior
has_exact_synonym: social behaviour
has_obo_namespace: biological_process
has_related_synonym: cooperative behavior
id: GO:0035176
comment: Behavior such as predation which involves members of different species is not social. Communication between members of different species is also not social behavior.

entry of bacterium into host cell
type: Class
subclass of: entry into host cell
definition: The process in which a bacterium enters a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: rfoulger
creation date: 2011-01-13T02:26:54Z
has_exact_synonym: bacterial entry into host cell
has_exact_synonym: invasion of bacteria into host cell
has_obo_namespace: biological_process
id: GO:0035635

multi-organism signaling
type: Class
subclass of: multi-organism process
definition: The transfer of information between living organisms.
imported from: go.owl
created by: rfoulger
creation date: 2011-01-14T10:11:25Z
has_exact_synonym: multi-organism signalling
has_exact_synonym: signaling between organisms
has_exact_synonym: signaling with other organism
has_narrow_synonym: pheromone signaling
has_obo_namespace: biological_process
id: GO:0035636

circadian mating behavior
type: Class
subclass of: mating behavior
definition: The fluctuation in mating behavior that occurs over an approximately 24 hour cycle.
imported from: go.owl
created by: rfoulger
creation date: 2011-01-25T10:20:05Z
has_exact_synonym: circadian mating behaviour
has_exact_synonym: circadian mating rhythm
has_obo_namespace: biological_process
id: GO:0035648

injection of substance in to other organism
type: Class
subclass of: multi-organism behavior
definition: The process of forcing a substance into another organism, either by penetrating the skin of the other organism or by applying the substance externally to a sensitive tissue such as those that surround the eyes.
imported from: go.owl
created by: rfoulger
creation date: 2011-03-17T10:58:57Z
has_obo_namespace: biological_process
id: GO:0035737

envenomation resulting in modification of morphology or physiology of other organism
type: Class
subclass of: injection of substance in to other organism
definition: The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the manifestation of some change or damage to the bitten organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-03-17T10:59:27Z
has_obo_namespace: biological_process
id: GO:0035738

transepithelial migration of symbiont in host
type: Class
subclass of: migration in host
definition: The directional movement of an organism from one side of an epithelium to the other within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: rfoulger
creation date: 2011-03-24T10:20:03Z
has_exact_synonym: migration in host through an epithelial cell layer
has_exact_synonym: migration of symbiont within host by transepithelial trafficking
has_obo_namespace: biological_process
id: GO:0035756

modulation of blood coagulation in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: Any process in which an organism modulates the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.
imported from: go.owl
created by: rfoulger
creation date: 2011-04-20T11:38:49Z
has_exact_synonym: modulation by organism of blood clotting in other organism
has_exact_synonym: modulation by organism of blood coagulation in other organism
has_exact_synonym: regulation by organism of blood clotting in other organism
has_exact_synonym: regulation of blood clotting in other organism
has_exact_synonym: regulation of blood coagulation in other organism
has_obo_namespace: biological_process
id: GO:0035806

positive regulation of blood coagulation in other organism
type: Class
subclass of: modulation of blood coagulation in other organism
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.
imported from: go.owl
created by: rfoulger
creation date: 2011-04-20T11:43:37Z
has_exact_synonym: positive regulation by organism of blood clotting in other organism
has_exact_synonym: positive regulation by organism of blood coagulation in other organism
has_exact_synonym: positive regulation of blood clotting in other organism
has_obo_namespace: biological_process
id: GO:0035807

modification of morphology or physiology of other organism
type: Class
subclass of: multi-organism process
definition: The process in which an organism effects a change in the structure or processes of a second organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-04-21T01:31:51Z
has_narrow_synonym: regulation of morphology of other organism
has_narrow_synonym: regulation of physiological process of other organism
has_narrow_synonym: regulation of physiology of other organism
has_obo_namespace: biological_process
has_related_synonym: regulation of morphology or physiology of other organism
id: GO:0035821

exit from host
type: Class
subclass of: movement in host environment
definition: The directed movement of an organism out of the body, tissues or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T02:08:03Z
has_obo_namespace: biological_process
has_related_synonym: ejection from host
id: GO:0035890

exit from host cell
type: Class
subclass of: exit from host
definition: The directed movement of an organism out of a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T02:09:28Z
has_exact_synonym: host cell exit
has_obo_namespace: biological_process
has_related_synonym: ejection from host cell
id: GO:0035891

modulation of platelet aggregation in other organism
type: Class
subclass of: modulation of blood coagulation in other organism
subclass of: disruption of cells of other organism
definition: Any process in which an organism modulates the frequency, rate or extent of platelet aggregation in another organism. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T02:21:10Z
has_exact_synonym: modulation by organism of platelet aggregation in other organism
has_obo_namespace: biological_process
has_related_synonym: regulation of platelet aggregation in other organism
id: GO:0035892

negative regulation of platelet aggregation in other organism
type: Class
subclass of: modulation of platelet aggregation in other organism
subclass of: negative regulation of blood coagulation in other organism
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of platelet aggregation in a second organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T02:24:43Z
has_exact_synonym: down-regulation of platelet aggregation in other organism
has_exact_synonym: downregulation of platelet aggregation in other organism
has_exact_synonym: inhibition of platelet aggregation in other organism
has_exact_synonym: suppression of platelet aggregation in other organism
has_obo_namespace: biological_process
id: GO:0035893

positive regulation of platelet aggregation in other organism
type: Class
subclass of: positive regulation of blood coagulation in other organism
subclass of: modulation of platelet aggregation in other organism
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of platelet aggregation in another organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T02:28:46Z
has_exact_synonym: upregulation of platelet aggregation in other organism
has_obo_namespace: biological_process
has_related_synonym: up-regulation of platelet aggregation in other organism
id: GO:0035894

modulation of mast cell degranulation in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: Any process in which an organism modulates the frequency, rate or extent of blood mast cell degranulation in another organism. Mast cell degranulation is the regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T02:46:50Z
has_exact_synonym: regulation of mast cell degranulation in other organism
has_obo_namespace: biological_process
id: GO:0035895

positive regulation of mast cell degranulation in other organism
type: Class
subclass of: modulation of mast cell degranulation in other organism
definition: Any process in which an organism increases the frequency, rate or extent of blood mast cell degranulation in another organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T02:49:03Z
has_exact_synonym: upregulation of mast cell degranulation in other organism
has_obo_namespace: biological_process
has_related_synonym: up-regulation of mast cell degranulation in other organism
id: GO:0035896

proteolysis in other organism
type: Class
subclass of: multi-organism metabolic process
definition: The chemical reactions and pathways performed by an organism resulting in the hydrolysis of proteins in another organism by cleavage of their peptide bonds.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-15T03:00:27Z
has_obo_namespace: biological_process
id: GO:0035897

negative regulation of blood coagulation in other organism
type: Class
subclass of: modulation of blood coagulation in other organism
definition: Any process in which an organism stops, prevents or reduces the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T09:17:54Z
has_exact_synonym: down-regulation of blood coagulation in other organism
has_exact_synonym: downregulation of blood coagulation in other organism
has_exact_synonym: negative regulation of blood clotting in other organism
has_exact_synonym: suppression of blood coagulation in other organism
has_narrow_synonym: inhibition of blood coagulation in other organism
has_obo_namespace: biological_process
id: GO:0035899

pore formation in membrane of other organism
type: Class
subclass of: membrane disruption in other organism
definition: The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-07-01T11:45:01Z
has_exact_synonym: pore biosynthesis in other organism
has_exact_synonym: pore complex assembly in other organism
has_exact_synonym: pore complex biogenesis in other organism
has_exact_synonym: pore formation in other organism
has_obo_namespace: biological_process
has_related_synonym: pore-forming toxin activity
id: GO:0035915

modulation of calcium channel activity in other organism
type: Class
subclass of: modulation of ion channel activity in other organism
definition: Any process in which an organism effects a change in the frequency, rate or extent of the activity of a calcium channel in another organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-07-01T11:51:38Z
has_obo_namespace: biological_process
id: GO:0035916

negative regulation of calcium channel activity in other organism
type: Class
subclass of: modulation of calcium channel activity in other organism
subclass of: negative regulation of molecular function in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-07-01T11:52:55Z
has_exact_synonym: down-regulation of calcium channel activity in other organism
has_exact_synonym: downregulation of calcium channel activity in other organism
has_narrow_synonym: inhibition of calcium channel activity in other organism
has_obo_namespace: biological_process
id: GO:0035917

negative regulation of voltage-gated calcium channel activity in other organism
type: Class
subclass of: negative regulation of calcium channel activity in other organism
definition: Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated calcium channel in another organism. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
imported from: go.owl
created by: rfoulger
creation date: 2011-07-01T11:54:43Z
has_exact_synonym: down-regulation of voltage-gated calcium channel activity in other organism
has_exact_synonym: downregulation of voltage-gated calcium channel activity in other organism
has_exact_synonym: negative regulation of voltage gated calcium channel activity in other organism
has_exact_synonym: negative regulation of voltage-dependent calcium channel activity in other organism
has_exact_synonym: negative regulation of voltage-sensitive calcium channel activity in other organism
has_narrow_synonym: inhibition of voltage-gated calcium channel activity in other organism
has_obo_namespace: biological_process
id: GO:0035918

negative regulation of low voltage-gated calcium channel activity in other organism
type: Class
subclass of: negative regulation of voltage-gated calcium channel activity in other organism
definition: Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.
imported from: go.owl
created by: rfoulger
creation date: 2011-07-01T11:56:21Z
has_exact_synonym: down-regulation of low voltage-gated calcium channel activity in other organism
has_exact_synonym: downregulation of low voltage-gated calcium channel activity in other organism
has_exact_synonym: negative regulation of low voltage gated calcium channel activity in other organism
has_exact_synonym: negative regulation of low voltage-dependent calcium channel activity in other organism
has_narrow_synonym: inhibition of low voltage-gated calcium channel activity in other organism
has_obo_namespace: biological_process
id: GO:0035919

negative regulation of high voltage-gated calcium channel activity in other organism
type: Class
subclass of: negative regulation of voltage-gated calcium channel activity in other organism
definition: Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a high voltage-gated calcium channel in another organism. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.
imported from: go.owl
created by: rfoulger
creation date: 2011-07-01T12:00:23Z
has_exact_synonym: down-regulation of high voltage-gated calcium channel activity in other organism
has_exact_synonym: downregulation of high voltage-gated calcium channel activity in other organism
has_exact_synonym: negative regulation of high voltage gated calcium channel activity in other organism
has_exact_synonym: negative regulation of high voltage-dependent calcium channel activity in other organism
has_narrow_synonym: inhibition of high voltage-gated calcium channel activity in other organism
has_obo_namespace: biological_process
id: GO:0035920

negative regulation of peptidase activity in other organism
type: Class
subclass of: negative regulation of molecular function in other organism
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-07-22T02:59:40Z
has_exact_synonym: down regulation of peptidase activity in other organism
has_exact_synonym: down-regulation of protease activity in other organism
has_exact_synonym: downregulation of peptidase activity in other organism
has_exact_synonym: negative regulation of protease activity in other organism
has_narrow_synonym: inhibition of protease activity in other organism
has_obo_namespace: biological_process
id: GO:0035940

phenotypic switching in response to host
type: Class
subclass of: multi-organism cellular process
subclass of: response to host
definition: A reversible switch of a cell from one phenotype to another that occurs upon infection of a host or host cell. For example, Candida albicans switches from a unicellular form to an invasive multicellular filamentous form upon infection of host tissue. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-27T01:44:24Z
has_obo_namespace: biological_process
id: GO:0036167

protein modification process in other organism
type: Class
subclass of: multi-organism metabolic process
definition: The covalent alteration performed by one organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) in another organism. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
imported from: go.owl
created by: rfoulger
creation date: 2012-04-26T01:29:29Z
has_exact_synonym: protein modification in other organism
has_obo_namespace: biological_process
id: GO:0036210

coflocculation
type: Class
subclass of: interspecies interaction between organisms
subclass of: multi-organism cellular process
definition: The non-sexual aggregation between single-celled organisms of different species.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-11T01:28:39Z
has_exact_synonym: co-flocculation
has_obo_namespace: biological_process
id: GO:0036281

coflocculation via protein-carbohydrate interaction
type: Class
subclass of: coflocculation
definition: The non-sexual aggregation between single-celled organisms of different species mediated by interaction of a protein in one species and a carbohydrate in the other species. For example, coflocculation between S. pombe and E. coli is mediated by mannose residues in the yeast cell wall interacting with lectin protein in E. coli cell projections.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-11T01:30:40Z
has_narrow_synonym: coflocculation via lectin-mannose interaction
has_obo_namespace: biological_process
id: GO:0036282

galactose-specific flocculation
type: Class
subclass of: flocculation via cell wall protein-carbohydrate interaction
definition: The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to galactose residues on the other.
imported from: go.owl
created by: rfoulger
creation date: 2012-09-19T10:56:16Z
has_obo_namespace: biological_process
id: GO:0036349

mannose-specific flocculation
type: Class
subclass of: flocculation via cell wall protein-carbohydrate interaction
definition: The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to mannose residues on the other.
imported from: go.owl
created by: rfoulger
creation date: 2012-09-19T10:57:34Z
has_obo_namespace: biological_process
id: GO:0036350

arbuscular mycorrhizal association
type: Class
subclass of: mutualism
definition: A form of mutualism between a fungus and the roots of a vascular plant, where hyphae of the fungus penetrate the plant cell wall and invaginate its cell membrane. Once inside, the fungus forms highly branched structures for nutrient exchange with the plant called arbuscules. Aids in the acquisition by the plant of nutrients such as phosphorus from the soil.
imported from: go.owl
created by: rfoulger
creation date: 2013-05-07T15:07:32Z
has_exact_synonym: arbuscular mycorrhizae formation
has_exact_synonym: arbuscular mycorrhizas formation
has_obo_namespace: biological_process
has_related_synonym: arbuscular mycorrhizal symbiosis
id: GO:0036377

suppression by virus of host type I interferon production
type: Class
subclass of: suppression by virus of host cytokine production
definition: Any viral process that results in the inhibition of host cell type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.
imported from: go.owl
created by: rfoulger
creation date: 2011-05-11T03:53:20Z
database_cross_reference: VZ:875
has_exact_synonym: negative regulation by virus of host type I interferon production
has_exact_synonym: suppression by virus of host interferon type I production
has_exact_synonym: suppression by virus of host type I IFN production
has_obo_namespace: biological_process
id: GO:0039501
in_subset: virus checked

suppression by virus of host type I interferon-mediated signaling pathway
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: negative regulation by symbiont of host transmembrane receptor-mediated signal transduction
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of type I interferon-mediated signaling in the host organism. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.
imported from: go.owl
created by: rfoulger
creation date: 2011-05-11T04:06:28Z
database_cross_reference: VZ:883
has_exact_synonym: negative regulation by virus of host type I interferon-mediated signaling pathway
has_exact_synonym: suppression by virus of host type I IFN-mediated signaling pathway
has_exact_synonym: suppression by virus of host type I interferon-mediated signalling pathway
has_obo_namespace: biological_process
has_related_synonym: inhibition of host interferon signaling pathway by virus
id: GO:0039502
in_subset: virus checked

suppression by virus of host innate immune response
type: Class
subclass of: evasion or tolerance by virus of host immune response
subclass of: negative regulation by symbiont of host innate immune response
subclass of: modulation by virus of host immune response
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism, the host's first line of defense.
imported from: go.owl
created by: rfoulger
creation date: 2011-05-11T04:31:17Z
has_exact_synonym: inhibition of host innate immune response by virus
has_exact_synonym: negative regulation by virus of host innate immune response
has_exact_synonym: negative regulation by virus of host innate immunity
has_exact_synonym: suppression by virus of host innate immunity
has_obo_namespace: biological_process
id: GO:0039503
in_subset: virus checked

suppression by virus of host adaptive immune response
type: Class
subclass of: evasion or tolerance by virus of host immune response
subclass of: negative regulation by symbiont of host immune response
subclass of: modulation by virus of host immune response
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the adaptive immune response of the host organism, an immune response based on directed amplification of specific receptors for antigen produced through a somatic diversification process, and allowing for enhanced response to subsequent exposures to the same antigen (immunological memory).
imported from: go.owl
created by: rfoulger
creation date: 2011-05-11T04:41:54Z
has_exact_synonym: inhibition of host adaptive immune response by virus
has_exact_synonym: negative regulation by virus of host adaptive immune response
has_exact_synonym: negative regulation by virus of host adaptive immunity
has_exact_synonym: suppression by virus of host acquired immune response
has_obo_namespace: biological_process
id: GO:0039504
in_subset: virus checked

suppression by virus of host antigen processing and presentation of peptide antigen via MHC class II
type: Class
subclass of: suppression by virus of host antigen processing and presentation
definition: Any viral process that inhibits a host antigen-presenting cell expressing a peptide antigen on its cell surface in association with an MHC class II protein complex.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-02T02:34:51Z
database_cross_reference: VZ:820
has_obo_namespace: biological_process
has_related_synonym: inhibition of host MHC class II molecule presentation by virus
id: GO:0039505
in_subset: virus checked

modulation by virus of host molecular function
type: Class
subclass of: modulation by virus of host morphology or physiology
subclass of: modulation by symbiont of host molecular function
definition: The process in which a virus effects a change in the function of a host protein via a direct interaction.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-02T02:38:42Z
has_exact_synonym: modification by virus of host protein function
has_obo_namespace: biological_process
id: GO:0039506
in_subset: virus checked

suppression by virus of host molecular function
type: Class
subclass of: modulation by virus of host molecular function
subclass of: negative regulation by symbiont of host molecular function
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host protein.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-02T02:47:03Z
has_exact_synonym: down regulation by virus of host protein function
has_exact_synonym: down-regulation by virus of host protein function
has_exact_synonym: negative regulation by virus of host molecular function
has_exact_synonym: negative regulation by virus of host protein function
has_narrow_synonym: inhibition by virus of host protein function
has_narrow_synonym: inhibition of host protein function
has_obo_namespace: biological_process
id: GO:0039507
in_subset: virus checked

suppression by virus of host receptor activity
type: Class
subclass of: suppression by virus of host molecular function
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host receptor.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-02T03:09:37Z
has_exact_synonym: down-regulation by virus of host receptor activity
has_exact_synonym: downregulation by virus of host receptor activity
has_exact_synonym: negative regulation by virus of host receptor activity
has_exact_synonym: suppression by virus of host receptor function
has_exact_synonym: viral inhibition of host receptor
has_narrow_synonym: inhibition by virus of host receptor activity
has_obo_namespace: biological_process
id: GO:0039508
in_subset: virus checked

suppression by virus of host pattern recognition receptor activity
type: Class
subclass of: suppression by virus of host receptor activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host pattern recognition receptor. A pattern recognition receptor combines with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-02T03:11:23Z
has_exact_synonym: down regulation by virus of host pattern recognition receptor activity
has_exact_synonym: down-regulation by virus of host pattern recognition receptor activity
has_exact_synonym: negative regulation by virus of host pattern recognition receptor activity
has_exact_synonym: suppression by virus of host pattern recognition receptor function
has_narrow_synonym: inhibition by virus of host pattern recognition receptor activity
has_narrow_synonym: viral inhibition of host pattern recognition receptor activity
has_obo_namespace: biological_process
id: GO:0039509
in_subset: virus checked

suppression by virus of host ATP-dependent RNA helicase activity
type: Class
subclass of: suppression by virus of host catalytic activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host ATP-dependent RNA helicase activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-16T02:11:00Z
has_exact_synonym: down-regulation by virus of host ATP-dependent RNA helicase activity
has_exact_synonym: downregulation by virus of host ATP-dependent RNA helicase activity
has_exact_synonym: negative regulation by virus of host ATP-dependent RNA helicase activity
has_narrow_synonym: inhibition by virus of host ATP-dependent RNA helicase activity
has_obo_namespace: biological_process
id: GO:0039510
in_subset: virus checked

suppression by virus of host interferon receptor activity
type: Class
subclass of: suppression by virus of host receptor activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host interferon receptor.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-16T02:24:05Z
database_cross_reference: VZ:843
has_exact_synonym: down-regulation by virus of host interferon receptor activity
has_exact_synonym: downregulation by virus of host interferon receptor activity
has_exact_synonym: inhibition of host interferon receptors by virus
has_exact_synonym: negative regulation by virus of host interferon receptor activity
has_narrow_synonym: inhibition by virus of host interferon receptor activity
has_obo_namespace: biological_process
id: GO:0039511
in_subset: virus checked

suppression by virus of host protein tyrosine kinase activity
type: Class
subclass of: suppression by virus of host protein kinase activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein tyrosine kinase activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-16T02:27:26Z
has_exact_synonym: down-regulation by virus of host protein tyrosine kinase activity
has_exact_synonym: downregulation by virus of host protein tyrosine kinase activity
has_exact_synonym: negative regulation by virus of host protein tyrosine kinase activity
has_narrow_synonym: inhibition by virus of host protein tyrosine kinase activity
has_obo_namespace: biological_process
id: GO:0039512
in_subset: virus checked

suppression by virus of host catalytic activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: modulation by virus of host catalytic activity
subclass of: negative regulation by symbiont of host catalytic activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host enzyme activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-16T02:32:49Z
has_exact_synonym: down-regulation by virus of host enzyme activity
has_exact_synonym: downregulation by virus of host catalytic activity
has_exact_synonym: negative regulation by virus of host catalytic activity
has_narrow_synonym: inhibition by virus of host catalytic activity
has_obo_namespace: biological_process
id: GO:0039513
in_subset: virus checked

suppression by virus of host JAK-STAT cascade
type: Class
subclass of: modulation by virus of host process
subclass of: negative regulation by symbiont of host signal transduction pathway
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the JAK-STAT signal cascade in the host organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-16T02:48:03Z
has_exact_synonym: down-regulation by virus of host JAK-STAT cascade
has_exact_synonym: downregulation by virus of host JAK-STAT cascade
has_exact_synonym: negative regulation by virus of host JAK-STAT cascade
has_narrow_synonym: inhibition by virus of host JAK-STAT cascade
has_obo_namespace: biological_process
id: GO:0039514
in_subset: virus checked

modulation by virus of host catalytic activity
type: Class
subclass of: modulation by virus of host molecular function
subclass of: modulation by symbiont of host catalytic activity
definition: The process in which a virus effects a change in host enzyme activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-16T02:59:35Z
has_exact_synonym: modulation of catalytic activity of host by virus
has_exact_synonym: regulation by virus of host catalytic activity
has_exact_synonym: regulation of host catalytic activity by virus
has_obo_namespace: biological_process
id: GO:0039516
in_subset: goslim virus
in_subset: virus checked

modulation by virus of host protein serine/threonine phosphatase activity
type: Class
subclass of: modulation by virus of host catalytic activity
definition: The process in which a virus effects a change in host protein serine/threonine phosphatase activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-16T03:04:14Z
has_exact_synonym: modulation by virus of protein serine/threonine phosphatase activity in host
has_exact_synonym: regulation by virus of host protein serine/threonine phosphatase activity
has_obo_namespace: biological_process
id: GO:0039517
in_subset: virus checked

suppression by virus of host cytokine activity
type: Class
subclass of: suppression by virus of host molecular function
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host cytokine activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T04:09:41Z
has_exact_synonym: down-regulation by virus of host cytokine activity
has_exact_synonym: downregulation by virus of host cytokine activity
has_exact_synonym: negative regulation by virus of host cytokine activity
has_narrow_synonym: inhibition by virus of host cytokine activity
has_obo_namespace: biological_process
id: GO:0039518
in_subset: virus checked

modulation by virus of host autophagy
type: Class
subclass of: modulation by virus of host process
definition: Any process in which a virus effect a change in the frequency, rate or extent of autophagy in the host.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T04:19:19Z
has_exact_synonym: regulation by virus of host autophagy
has_obo_namespace: biological_process
id: GO:0039519
in_subset: goslim virus
in_subset: virus checked

induction by virus of host autophagy
type: Class
subclass of: modulation by virus of host autophagy
definition: Any process in which a virus activates or increases the frequency, rate or extent of autophagy in the host.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T04:24:47Z
has_broad_synonym: positive regulation by virus of host autophagy
database_cross_reference: VZ:846
has_exact_synonym: activation of host autophagy by virus
has_obo_namespace: biological_process
id: GO:0039520
in_subset: virus checked

suppression by virus of host autophagy
type: Class
subclass of: modulation by virus of host autophagy
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of autophagy in the host.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T04:30:11Z
has_broad_synonym: negative regulation by virus of host autophagy
database_cross_reference: VZ:845
has_exact_synonym: inhibition by virus of host autophagy
has_exact_synonym: inhibition of host autophagy by virus
has_obo_namespace: biological_process
id: GO:0039521
in_subset: virus checked

suppression by virus of host mRNA export from nucleus
type: Class
subclass of: modulation by virus of host process
subclass of: modulation by symbiont of host intracellular transport
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of movement of mRNA from the nucleus to the cytoplasm in the host organism.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T04:34:14Z
has_broad_synonym: negative regulation by virus of host mRNA nuclear export
database_cross_reference: VZ:902
has_exact_synonym: inhibition by virus of host mRNA nuclear export
has_exact_synonym: inhibition of host mRNA nuclear export by virus
has_exact_synonym: suppression of host mRNA nuclear export by virus
has_obo_namespace: biological_process
id: GO:0039522
in_subset: virus checked

suppression by virus of host RNA polymerase II activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host transcription
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host RNA polymerase II activity.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T04:38:59Z
has_broad_synonym: negative regulation by virus of host RNA polymerase II activity
database_cross_reference: VZ:905
has_exact_synonym: inhibition of host RNA polymerase II activity by virus
has_exact_synonym: inhibition of host RNA polymerase II by virus
has_obo_namespace: biological_process
id: GO:0039523
in_subset: virus checked

suppression by virus of host mRNA processing
type: Class
subclass of: suppression by virus of host gene expression
subclass of: modification by virus of host mRNA processing
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of mRNA processing in the host cell. mRNA processing is the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T04:51:55Z
has_broad_synonym: negative regulation by virus of host mRNA processing
database_cross_reference: VZ:903
has_exact_synonym: inhibition by virus of host mRNA processing
has_exact_synonym: inhibition of host mRNA processing by virus
has_exact_synonym: inhibition of host pre-mRNA processing by virus
has_obo_namespace: biological_process
id: GO:0039524
in_subset: virus checked

modulation by virus of host chromatin organization
type: Class
subclass of: modulation by virus of host process
definition: Any process in which a virus effects a change in the organization of chromatin in the host.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T05:11:13Z
has_exact_synonym: modulation by virus of host chromatin organisation
has_exact_synonym: modulation of host chromatin by virus
has_exact_synonym: modulation of host chromatin structure by virus
has_obo_namespace: biological_process
has_related_synonym: regulation by virus of host chromatin organization
id: GO:0039525
in_subset: virus checked

modulation by virus of host apoptotic process
type: Class
subclass of: modulation by virus of host process
subclass of: modulation by symbiont of host apoptotic process
definition: Any process in which a virus modulates the frequency, rate or extent of apoptosis of infected host cells.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T05:22:53Z
database_cross_reference: VZ:1581
has_exact_synonym: modulation by virus of host apoptosis
has_exact_synonym: modulation of host cell apoptosis by virus
has_exact_synonym: regulation by virus of host apoptosis
has_obo_namespace: biological_process
id: GO:0039526
in_subset: goslim virus
in_subset: virus checked

suppression by virus of host TRAF-mediated signal transduction
type: Class
subclass of: modulation by virus of host process
subclass of: negative regulation by symbiont of host signal transduction pathway
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of TRAF-mediated signal transduction in the host.
imported from: go.owl
created by: rfoulger
creation date: 2011-06-22T05:30:41Z
has_broad_synonym: negative regulation by virus of host TRAF-mediated signal transduction
has_exact_synonym: inhibition of host TRAF-mediated signal transduction by virus
has_exact_synonym: suppression by virus of host tumor necrosis factor receptor-associated factor signaling
has_obo_namespace: biological_process
id: GO:0039527
in_subset: virus checked

cytoplasmic pattern recognition receptor signaling pathway in response to virus
type: Class
subclass of: multi-organism cellular process
subclass of: cellular response to virus
definition: Any series of molecular signals generated as a consequence of a virus or viral RNA binding to a pattern recognition receptor (PRR) located in the cytoplasm. Cytosolic PRRs such as RIG-I (DDX58) and MDA-5 (IFIH1) detect RNA synthesized during active viral replication and trigger a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.
imported from: go.owl
created by: rfoulger
creation date: 2011-12-20T02:43:15Z
has_exact_synonym: cytoplasmic pattern recognition receptor signalling pathway in response to virus
has_exact_synonym: virus-induced cytoplasmic pattern recognition receptor signaling pathway
has_narrow_synonym: RIG-I-like receptor (RLR) signaling pathway
has_narrow_synonym: RIG-I/MDA5 signaling pathway
has_narrow_synonym: RIG-like helicase signaling pathway
has_narrow_synonym: RIG-like receptor signaling pathway
has_narrow_synonym: RLH signaling pathway
has_narrow_synonym: RLR signaling pathway
has_narrow_synonym: cytoplasmic caspase-recruiting domain (CARD) helicase signaling pathway
has_obo_namespace: biological_process
id: GO:0039528
comment: This term should be used for annotation when it is not known which cytoplasmic pattern recognition receptor (PRR) has detected the viral RNA. If the PRR is known, consider instead the child terms. The RIG-like family is composed of at least RIG-I (retinoic acid inducible gene I; also known as DDX58), melanoma differentiation-associated gene 5 (MDA5; also known as helicard or IFIH1) and LGP2.

RIG-I signaling pathway
type: Class
subclass of: cytoplasmic pattern recognition receptor signaling pathway in response to virus
definition: Any series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) RIG-1 (also known as DDX58) binding to viral RNA. RIG-I detects RNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.
imported from: go.owl
created by: rfoulger
creation date: 2011-12-20T03:11:06Z
has_exact_synonym: DDX58 signaling pathway
has_exact_synonym: RIG-I signalling pathway
has_exact_synonym: retinoic acid inducible gene I signaling pathway
has_obo_namespace: biological_process
id: GO:0039529
in_subset: virus checked
comment: The apoptosis effect triggered by the RIG-I signaling pathway is inconclusive and may represent an in-vitro phenomenon. Therefore, in GO the term 'RIG-I signaling pathway ; GO:0039529' is positioned under 'regulation of cytokine production' as this is its primary effect.

MDA-5 signaling pathway
type: Class
subclass of: cytoplasmic pattern recognition receptor signaling pathway in response to virus
definition: Any series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1) binding to viral RNA. MDA-5 detects RNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.
imported from: go.owl
created by: rfoulger
creation date: 2011-12-20T03:14:52Z
has_exact_synonym: IFIH1 signaling pathway
has_exact_synonym: MDA-5 signalling pathway
has_exact_synonym: melanoma differentiation-associated gene 5 signaling pathway
has_narrow_synonym: MDA5 signaling pathway
has_obo_namespace: biological_process
id: GO:0039530
in_subset: virus checked

suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: negative regulation by symbiont of host receptor-mediated signal transduction
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the series of molecular signals generated as a consequence of a virus or viral RNA binding to a pattern recognition receptor (PRR) located in the cytoplasm. This is a mechanism by which the virus evades the host innate immune response.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-03T11:47:05Z
has_exact_synonym: suppression by virus of host cytoplasmic pattern recognition receptor signaling pathway in response to virus
has_exact_synonym: suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signalling pathway
has_obo_namespace: biological_process
has_related_synonym: suppression by virus of host RIG-I-like receptor (RLR) signaling pathway
has_related_synonym: suppression by virus of host RIG-I/MDA5 signaling pathway
has_related_synonym: suppression by virus of host RIG-like helicase signaling pathway
has_related_synonym: suppression by virus of host RIG-like receptor signaling pathway
has_related_synonym: suppression by virus of host RLR signaling pathway
id: GO:0039537
in_subset: virus checked

suppression by virus of host RIG-I signaling pathway
type: Class
subclass of: suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) RIG-1 (also known as DDX58) binding to viral RNA. This is a mechanism by which the virus evades the host innate immune response.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-03T11:50:17Z
has_exact_synonym: inhibition by virus of host RIG-I signaling
has_exact_synonym: suppression by virus of host DDX58 signaling pathway
has_exact_synonym: suppression by virus of host RIG-I signalling pathway
has_obo_namespace: biological_process
id: GO:0039538
in_subset: virus checked

suppression by virus of host MDA-5 signaling pathway
type: Class
subclass of: suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1) binding to viral RNA. This is a mechanism by which the virus evades the host innate immune response.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-03T11:51:36Z
has_exact_synonym: inhibition by virus of host MDA-5 signaling
has_exact_synonym: suppression by virus of host IFIH1 signaling pathway
has_exact_synonym: suppression by virus of host MDA-5 signalling pathway
has_obo_namespace: biological_process
id: GO:0039539
in_subset: virus checked

suppression by virus of host RIG-I activity
type: Class
subclass of: suppression by virus of host pattern recognition receptor activity
subclass of: suppression by virus of host RIG-I signaling pathway
definition: Any process in which a virus stops, prevents, or reduces the activity of RIG-1 (also known as DDX58). The cytoplasmic pattern recognition RIG-I recognizes viral RNA synthesized during active viral replication and signals to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-18T02:24:20Z
database_cross_reference: VZ:856
has_exact_synonym: inhibition by virus of host DDX58 activity
has_exact_synonym: inhibition of host DDX58/RIG-I by virus
has_obo_namespace: biological_process
has_related_synonym: inhibition by virus of host RIG-I
id: GO:0039540
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response initiated by host RIG-I, either by binding and inhibiting host RIG-I directly, or by interfering with other processes so that RIG-I is unable to carry out its normal function (e.g. by processing viral RNA so it cannot be recognized by RIG-I, or by promoting the degradation of RIG-I).

suppression by virus of host RIG-I via RIG-I binding
type: Class
subclass of: suppression by virus of host RIG-I activity
definition: Any process in which a virus stops, prevents, or reduces the activity of RIG-I (also known as DDX58) by interacting selectively and non-covalently with RIG-I itself.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-19T02:14:20Z
has_exact_synonym: inhibition by virus of host DDX58:MAVS binding
has_obo_namespace: biological_process
id: GO:0039541
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response. Direct binding of viral proteins to the host RIG-I protein can inhibit interaction of RIG-I with its downstream effector MAVS.

suppression by virus of host RIG-I K63-linked ubiquitination
type: Class
subclass of: suppression by virus of host RIG-I activity
definition: Any process in which a virus stops, prevents, or reduces the rate or extent of K63-linked ubiquitination of RIG-I (also known as DDX58), thereby suppressing RIG-I signal transduction. Lys63-linked ubiquitination of the N-terminal CARD domains of RIG-I is crucial for the cytosolic RIG-I signaling pathway to elicit host antiviral innate immunity.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-18T02:30:29Z
has_broad_synonym: inhibition by virus of host RIG-I activity by inhibition of RIG-I ubiquitination
has_exact_synonym: inhibition by virus of TRIM25-mediated ubiquitination of host RIG-I
has_exact_synonym: inhibition by virus of host DDX58 K63-linked ubiquitination
has_obo_namespace: biological_process
id: GO:0039542
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host RIG-I activity by viral RNA 5' processing
type: Class
subclass of: suppression by virus of host RIG-I activity
definition: The post-transcriptional removal by a virus of the 5' triphosphate group of their viral RNA, thereby preventing host RIG-I from recognizing viral RNA in the host cell. The intracellular pattern recognition receptor RIG-I (also known as DDX58) recognizes viral RNAs containing 5' triphosphates; removal by the virus of the 5'-terminal triphosphate group from their genome protects the viral RNA from RIG-recognition.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-18T02:30:29Z
has_narrow_synonym: suppression by virus of host RIG-I activity by inhibition of RNA binding
has_obo_namespace: biological_process
id: GO:0039543
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host RIG-I activity by RIG-I proteolysis
type: Class
subclass of: proteolysis in other organism
subclass of: suppression by virus of host RIG-I activity
definition: The chemical reactions and pathways performed by a virus resulting in the hydrolysis of the host RIG-I protein (also known as DDX58) by cleavage of peptide bonds, thereby inhibiting RIG-I signal transduction.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-18T02:30:29Z
has_exact_synonym: cleavage of RIG-I by viral proteinase
has_obo_namespace: biological_process
has_related_synonym: inhibition by virus of host RIG-I activity by RIG-I proteolysis
id: GO:0039544
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host MAVS activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway
definition: Any process in which a virus stops, prevents, or reduces the activity of MAVS (mitochondrial antiviral signaling protein), a signal transducer that lies downstream of the viral RNA receptors MDA-5 and RIG-I to coordinate host innate immune responses.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-19T02:37:20Z
database_cross_reference: VZ:704
has_exact_synonym: inhibition of host MAVS by virus
has_exact_synonym: suppression by virus of host mitochondrial antiviral-signaling protein
has_obo_namespace: biological_process
id: GO:0039545
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host MAVS activity by MAVS proteolysis
type: Class
subclass of: proteolysis in other organism
subclass of: suppression by virus of host MAVS activity
definition: The chemical reactions and pathways performed by a virus resulting in the hydrolysis of the host MAVS (mitochondrial inhibitor of viral signaling) protein by cleavage of peptide bonds, thereby inhibiting the host innate immune response. For example, MAVS harbors a C-terminal transmembrane domain that targets it to the mitochondrial outer membrane; cleavage within this domain removes MAVS from the membrane, thus preventing it from signaling.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-19T02:49:44Z
has_exact_synonym: viral protease cleavage of MAVS
has_obo_namespace: biological_process
id: GO:0039546
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host TRAF activity
type: Class
subclass of: suppression by virus of host molecular function
definition: Any process in which a virus stops, prevents, or reduces the activity of a host TRAF (tumor necrosis factor receptor-associated factor) protein. TRAFs are intracellular signal transducers that lie downstream of receptors including RIG-I, MDA-5 and Toll-like receptors (TLR) and transfer the signal to other intracellular signaling components.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-19T03:12:15Z
has_exact_synonym: inhibition of host TRAFs by virus
has_obo_namespace: biological_process
id: GO:0039547
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF3 activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host transcription
definition: Any process in which a virus stops, prevents, or reduces the activity of host IRF3 (interferon regulatory factor-3), a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF3, which allows IRF3 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-19T04:04:26Z
has_broad_synonym: Inhibition of IRF3-dependent antiviral response
database_cross_reference: VZ:757
has_exact_synonym: inhibition of host IRF3 by virus
has_exact_synonym: suppression by virus of host interferon regulatory factor 3
has_obo_namespace: biological_process
id: GO:0039548
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation
type: Class
subclass of: suppression by virus of host IRF3 activity
subclass of: suppression by virus of host protein phosphorylation
definition: Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-19T04:27:06Z
has_broad_synonym: inhibition of virus-induced IRF-3 phosphorylation
has_obo_namespace: biological_process
has_related_synonym: inhibition of phosphorylation-induced activation of host IRF3
id: GO:0039549
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF3 activity by inhibition of DNA binding
type: Class
subclass of: suppression by virus of host IRF3 activity
definition: Any process in which a virus stops, prevents, or reduces IRF3-dependent gene transcription, by preventing or reducing IRF3 binding to promoter sites.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-19T04:27:25Z
has_exact_synonym: inhibition by virus of host IRF3-DNA binding
has_obo_namespace: biological_process
id: GO:0039550
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF3 activity by positive regulation of IRF3 catabolic process
type: Class
subclass of: suppression by virus of host IRF3 activity
definition: Any process in which a virus stops, prevents, or reduces the activity of host IRF3 (interferon regulatory factor-3) by promoting the ubiquitin-dependent degradation of IRF3, mediated by the proteasome.
imported from: go.owl
created by: rfoulger
creation date: 2012-01-20T11:35:33Z
has_exact_synonym: promotion by virus of proteosome-dependent IRF3 degradation
has_obo_namespace: biological_process
id: GO:0039551
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host chemokine activity
type: Class
subclass of: suppression by virus of host cytokine activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host chemokine activity.
imported from: go.owl
created by: rfoulger
creation date: 2012-02-28T01:29:55Z
database_cross_reference: VZ:813
has_exact_synonym: down-regulation by virus of host chemokine activity
has_exact_synonym: downregulation by virus of host chemokine activity
has_exact_synonym: negative regulation by virus of host chemokine activity
has_narrow_synonym: inhibition by virus of host chemokine activity
has_narrow_synonym: inhibition of host chemokines by virus
has_obo_namespace: biological_process
id: GO:0039553
in_subset: virus checked

suppression by virus of host MDA-5 activity
type: Class
subclass of: suppression by virus of host pattern recognition receptor activity
subclass of: suppression by virus of host MDA-5 signaling pathway
definition: Any process in which a virus stops, prevents, or reduces the activity of MDA-5 (also known as IFIH1). The cytoplasmic pattern recognition receptor MDA-5 detects dsRNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-09T03:03:49Z
database_cross_reference: VZ:603
has_exact_synonym: Inhibition of host MDA5 by virus
has_obo_namespace: biological_process
has_related_synonym: inhibition of host IFIH1/MDA5 by virus
id: GO:0039554
in_subset: virus checked

suppression by virus of host MDA-5 activity via MDA-5 binding
type: Class
subclass of: suppression by virus of host MDA-5 activity
definition: Any process in which a virus stops, prevents, or reduces the activity of MDA-5 (also known as IFIH1) by interacting selectively and non-covalently with MDA-5 itself. For example, direct binding of viral proteins to the host MDA-5 protein can inhibit interaction of MDA-5 with MAVS, its downstream signaling effector.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-09T04:06:46Z
has_exact_synonym: suppression by virus of host MDA5 activity by MDA-5 binding
has_obo_namespace: biological_process
id: GO:0039555
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF7 activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host transcription
definition: Any process in which a virus stops, prevents, or reduces the activity of host IRF7 (interferon regulatory factor-7), a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF7, which allows IRF7 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-09T04:17:46Z
database_cross_reference: VZ:653
has_exact_synonym: inhibition of host IRF7 by virus
has_exact_synonym: inhibition of host interferon regulatory factor-7 by virus
has_exact_synonym: suppression by virus of host interferon regulatory factor 7 activity
has_obo_namespace: biological_process
id: GO:0039557
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation
type: Class
subclass of: suppression by virus of host IRF7 activity
definition: Any process in which a virus stops, prevents, or reduces IRF7-dependent gene transcription, by promoting the sumoylation of IRF7, thereby disabling its activity.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-09T04:27:57Z
has_exact_synonym: promotion of IRF-7 SUMOylation
has_obo_namespace: biological_process
has_related_synonym: suppression by virus of host interferon regulatory factor-7 activity by positive regulation of IRF7 sumoylation
id: GO:0039558
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF7 activity by positive regulation of IRF7 catabolic process
type: Class
subclass of: suppression by virus of host IRF7 activity
definition: Any process in which a virus stops, prevents, or reduces the activity of host IRF7 (interferon regulatory factor-7) by promoting the ubiquitin-dependent degradation of IRF7, mediated by the proteasome.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-09T04:38:58Z
has_exact_synonym: promotion by virus of proteosome-dependent IRF7 degradation
has_obo_namespace: biological_process
id: GO:0039559
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF9 activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host transcription
definition: Any process in which a virus stops, prevents, or reduces the activity of host IRF9 (interferon regulatory factor-9), a transcription factor involved in the innate immune response. Viral infection triggers binding of IRF9 to phosphorylated STAT1 and STAT2, forming the ISGF3 complex. The ISGF3 complex migrates to the nucleus and activates transcription of IFN-responsive genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-09T04:42:08Z
database_cross_reference: VZ:683
has_exact_synonym: inhibition of host IRF9 by virus
has_exact_synonym: inhibition of host interferon regulatory factor-9 by virus
has_exact_synonym: suppression by virus of host interferon regulatory factor 9 activity
has_obo_namespace: biological_process
id: GO:0039560
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus
type: Class
subclass of: suppression by virus of host IRF9 activity
definition: Any process in which a virus stops, prevents, or reduces the activity of host IRF9 (interferon regulatory factor-9) by promoting the nuclear accumulation of IRF9. For example, the reovirus mu2 protein promotes nuclear accumulation of host IRF9 by an as yet unconfirmed-mechanism.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-09T04:53:44Z
has_obo_namespace: biological_process
has_related_synonym: suppression by virus of host IRF9 activity by nuclear localization of IRF9
has_related_synonym: suppression of interferon signaling by nuclear accumulation of IRF9
id: GO:0039561
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host STAT activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host JAK-STAT cascade
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT (signal transducer and activator of transcription) activity. STATs are SH2 domain-containing proteins which lie downstream of many signaling receptors. Upon phosphorylation by JAKs, STAT proteins hetero- or homo-dimerize and translocate to the nucleus to activate transcription of target genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T02:28:39Z
has_exact_synonym: suppression by virus of host signal transducer and activator of transcription activity
has_narrow_synonym: inhibition by virus of host STAT activity
has_obo_namespace: biological_process
id: GO:0039562
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host STAT1 activity
type: Class
subclass of: suppression by virus of host STAT activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity. STATs are SH2 domain-containing proteins which lie downstream of many signaling receptors. Upon phosphorylation by JAKs, STAT proteins hetero- or homo-dimerize and translocate to the nucleus to activate transcription of target genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T02:35:39Z
database_cross_reference: VZ:282
has_narrow_synonym: Inhibition of host STAT1 by virus
has_narrow_synonym: inhibition by virus of host STAT1 activity
has_obo_namespace: biological_process
id: GO:0039563
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host STAT2 activity
type: Class
subclass of: suppression by virus of host STAT activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity. STATs are SH2 domain-containing proteins which lie downstream of many signaling receptors. Upon phosphorylation by JAKs, STAT proteins hetero- or homo-dimerize and translocate to the nucleus to activate transcription of target genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T02:52:34Z
database_cross_reference: VZ:257
has_exact_synonym: Inhibition of host STAT2 by virus
has_narrow_synonym: inhibition by virus of host STAT2 activity
has_obo_namespace: biological_process
id: GO:0039564
in_subset: virus checked

suppression by virus of host STAT1 activity by positive regulation of STAT1 catabolic process
type: Class
subclass of: suppression by virus of host STAT1 activity
definition: Any process in which a virus stops, prevents, or reduces the activity of host STAT1 (signal transducer and activator of transcription-1) by promoting the ubiquitin-dependent degradation of STAT1, mediated by the proteasome.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T02:57:36Z
has_exact_synonym: promotion by virus of proteosome-dependent STAT1 degradation
has_exact_synonym: suppression by virus of host STAT1 activity by positive promotion of STAT1 proteasome-mediated degradation
has_exact_synonym: targeting STAT1 for proteasome-mediated degradation
has_obo_namespace: biological_process
id: GO:0039565
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response. The Sendai virus protein C binds STAT1 directly to induce its degradation, whereas the V protein of simian virus 5 targets STAT1 for degradation by acting as an adaptor, without binding to STAT1.

suppression by virus of host STAT1 activity by tyrosine dephosphorylation of STAT1
type: Class
subclass of: protein modification process in other organism
subclass of: suppression by virus of host STAT1 activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by the removal of phosphoric residues from STAT1-O-phospho-tyrosine to form STAT1-tyrosine. For example, the viral phosphatase VH1 dephosphorylates STAT1 to reverse STAT1 activation.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T04:08:32Z
has_exact_synonym: suppression by virus of host STAT1 activity by peptidyl-tyrosine dephosphorylation of STAT1
has_obo_namespace: biological_process
has_related_synonym: viral tyrosine phosphatase activity involved in suppression of host STAT1
id: GO:0039566
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host STAT1 activity by negative regulation of STAT protein import into nucleus
type: Class
subclass of: suppression by virus of host STAT1 activity
subclass of: modulation by virus of host protein transport
subclass of: negative regulation by symbiont of host intracellular transport
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by retaining STAT1 in the cytoplasm, so STAT1 is unable to translocate to the nucleus to activate transcription of its target genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T04:24:36Z
has_broad_synonym: cytoplasmic sequestration of STAT1
has_exact_synonym: suppression by virus of host STAT1 activity by cytoplasmic sequestering of STAT1
has_obo_namespace: biological_process
id: GO:0039567
in_subset: virus checked

suppression by virus of host STAT1 activity by inhibition of DNA binding
type: Class
subclass of: suppression by virus of host STAT1 activity
definition: Any process in which a virus stops, prevents, or reduces STAT1-dependent gene transcription, by preventing STAT1 from binding to promoter sites in the nucleus.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T04:31:58Z
has_exact_synonym: inhibition of DNA binding of STAT1
has_exact_synonym: suppression by virus of host STAT1 activity by negative regulation of DNA binding
has_obo_namespace: biological_process
id: GO:0039568
in_subset: virus checked

suppression by virus of host STAT2 activity by positive regulation of STAT2 catabolic process
type: Class
subclass of: suppression by virus of host STAT2 activity
definition: Any process in which a virus stops, prevents, or reduces the activity of host STAT2 (signal transducer and activator of transcription-2) by promoting the ubiquitin-dependent degradation of STAT2, mediated by the proteasome.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T04:43:44Z
has_exact_synonym: promotion by virus of proteosome-dependent STAT2 degradation
has_exact_synonym: suppression by virus of host STAT2 activity by positive promotion of STAT2 proteasome-mediated degradation
has_exact_synonym: targeting STAT2 for proteasome-mediated degradation
has_obo_namespace: biological_process
id: GO:0039569
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response. The Sendai virus protein C binds STAT1 directly to induce its degradation, whereas the V protein of simian virus 5 targets STAT1 for degradation by acting as an adaptor, without binding to STAT1.

suppression by virus of host STAT2 activity by negative regulation of STAT protein import into nucleus
type: Class
subclass of: suppression by virus of host STAT2 activity
subclass of: modulation by virus of host protein transport
subclass of: negative regulation by symbiont of host intracellular transport
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by retaining STAT2 in the cytoplasm, so STAT2 is unable to translocate to the nucleus to activate transcription of its target genes.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T04:46:49Z
has_exact_synonym: cytoplasmic sequestering of STAT2
has_exact_synonym: cytoplasmic sequestration of STAT2
has_obo_namespace: biological_process
id: GO:0039570
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host STAT1 activity by negative regulation of STAT1 tyrosine phosphorylation
type: Class
subclass of: suppression by virus of host STAT1 activity
subclass of: suppression by virus of host protein phosphorylation
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by stopping, preventing, or reducing the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT1 protein. For example, the measles virus V protein inhibits tyrosine phosphorylation of STAT1, thereby preventing STAT1 activation.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T04:50:38Z
has_obo_namespace: biological_process
has_related_synonym: inhibition by virus of tyrosine phosphorylation of STAT1
id: GO:0039571
in_subset: virus checked
comment: This term is for annotation of viral proteins that counteract the host anti-viral innate immune response.

suppression by virus of host STAT2 activity by negative regulation of STAT2 tyrosine phosphorylation
type: Class
subclass of: suppression by virus of host STAT2 activity
subclass of: suppression by virus of host protein phosphorylation
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by stopping, preventing, or reducing the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT2 protein. For example, the measles virus V protein inhibits tyrosine phosphorylation of STAT2, thereby preventing STAT2 activation.
imported from: go.owl
created by: rfoulger
creation date: 2012-03-12T04:53:50Z
has_exact_synonym: inhibition by virus of tyrosine phosphorylation of STAT2
has_obo_namespace: biological_process
id: GO:0039572
in_subset: virus checked

suppression by virus of host complement activation
type: Class
subclass of: evasion or tolerance by virus of host immune response
subclass of: modulation by virus of host immune response
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of complement activation. The activation of complement involves the sequential proteolysis of proteins to generate enzymes with catalytic activities. The biological functions of the complement include opsonization, inflammation, lysis of immune complexes, or enhancement of the humoral immune response. For example, the virus complement control protein (VCP) of vaccinia virus, and the complement control protein of herpesvirus inhibit C3 convertase.
imported from: go.owl
created by: rfoulger
has_broad_synonym: inhibition of host complement factors by virus
database_cross_reference: VZ:811
has_exact_synonym: inhibition of host complement activation by virus
has_exact_synonym: inhibition of host complement cascade by virus
has_obo_namespace: biological_process
id: GO:0039573
in_subset: virus checked

suppression by virus of host TYK2 activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host protein tyrosine kinase activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host TYK2 (tyrosine kinase 2) activity. TYK2 is an intracellular signal-transducing tyrosine kinase that associates with the cytoplasmic tails of cytokine receptors and transmits the cytokine signal by phosphorylating receptor subunits.
imported from: go.owl
created by: rfoulger
database_cross_reference: VZ:720
has_exact_synonym: suppression by virus of host non-receptor tyrosine-protein kinase TYK2 activity
has_obo_namespace: biological_process
id: GO:0039574
in_subset: virus checked

suppression by virus of host TYK2 activity by negative regulation of TYK2 tyrosine phosphorylation
type: Class
subclass of: suppression by virus of host TYK2 activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host TYK2 (tyrosine kinase 2) activity by stopping, preventing or reducing phosphorylation and thereby activation of TYK2.
imported from: go.owl
created by: rfoulger
has_broad_synonym: inhibition by virus of host TYK2 activation
has_exact_synonym: inhibition by virus of host TYK2 phosphorylation
has_obo_namespace: biological_process
id: GO:0039575
in_subset: virus checked

suppression by virus of host JAK1 activity
type: Class
subclass of: suppression by virus of host protein tyrosine kinase activity
subclass of: suppression by virus of host JAK-STAT cascade
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host JAK1 (Janus Kinase 1) activity. In the host, binding of a ligand to a receptor triggers activation of JAK proteins, which phosphorylate tyrosine residues on the receptor creating sites for STAT proteins to bind, which are in turn phosphorylated and activated by JAK proteins. By blocking JAK1 activity, many viruses block the host signal transduction pathway.
imported from: go.owl
created by: rfoulger
has_alternative_id: GO:0039515
database_cross_reference: VZ:784
has_exact_synonym: negative regulation by virus of host JAK
has_exact_synonym: suppression by virus of host janus kinase 1 activity
has_narrow_synonym: inhibition of host JAK activity by virus
has_narrow_synonym: negative regulation by virus of tyrosine phosphorylation of host STAT protein
has_narrow_synonym: suppression by virus of tyrosine phosphorylation of host STAT protein
has_narrow_synonym: viral inhibition of tyrosine phosphorylation of host STAT protein
has_obo_namespace: biological_process
id: GO:0039576
in_subset: virus checked

suppression by virus of host JAK1 activity by negative regulation of JAK1 phosphorylation
type: Class
subclass of: suppression by virus of host JAK1 activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host JAK1 (Janus Kinase 1) activity by stopping, preventing or reducing tyrosine phosphorylation of JAK1 and thereby activation of JAK1.
imported from: go.owl
created by: rfoulger
has_obo_namespace: biological_process
id: GO:0039577
in_subset: virus checked

suppression by virus of host JAK1 activity via JAK1 binding
type: Class
subclass of: suppression by virus of host JAK1 activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host JAK1 (Janus Kinase 1) activity by interacting directly and selectively with JAK1. For example, the polyoma virus T antigen binds to JAK1 and renders it inactive.
imported from: go.owl
created by: rfoulger
has_obo_namespace: biological_process
id: GO:0039578
in_subset: virus checked

suppression by virus of host ISG15 activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host molecular function
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host ubiquitin-like protein ISG15 activity. ISG15 is a ubiquitin-like protein that is conjugated to lysine residues on various target proteins. Viruses escape from the antiviral activity of ISG15 by using different mechanisms; the influenza B virus NS1 protein for instance blocks the covalent linkage of ISG15 to its target proteins by directly interacting with ISG15. The papain-like protease from the coronavirus cleaves ISG15 derivatives.
imported from: go.owl
created by: rfoulger
database_cross_reference: VZ:723
has_obo_namespace: biological_process
id: GO:0039579
in_subset: virus checked

suppression by virus of host PKR activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host protein kinase activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity. Activation of PKR involves dsRNA binding followed by autophosphorylation. Phosphorylated PKR can then phosphorylate downstream targets such as the translation initiation factor eIF2 to inhibit protein synthesis. Viruses encode a number of mechanisms to inhibit the host antiviral response via PKR, including direct interaction with PKR, promoting degradation of PKR or altering the subcellular location of PKR.
imported from: go.owl
created by: rfoulger
database_cross_reference: VZ:554
has_exact_synonym: suppression by virus of host EIF2AK2 activity
has_obo_namespace: biological_process
id: GO:0039580
in_subset: virus checked

suppression by virus of host PKR activity via double-stranded RNA binding
type: Class
subclass of: suppression by virus of host PKR activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by interacting selectively and non-covalently with double-stranded RNA (dsRNA). Binding of viral proteins to RNA may sequester or alter the RNA so it can not be recognized by host PKR, or may compete with PKR for dsRNA binding.
imported from: go.owl
created by: rfoulger
has_exact_synonym: suppression by virus of host PKR activity by binding to dsRNA
has_obo_namespace: biological_process
id: GO:0039581
in_subset: virus checked

suppression by virus of host PKR activity by positive regulation of PKR nuclear localization
type: Class
subclass of: suppression by virus of host PKR activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by promoting the localization of PKR in the nucleus. For example, human cytomegalovirus (HMCV) gene products directly interact with PKR and inhibit its activation by sequestering it in the nucleus, away from both its activator (cytoplasmic dsRNA) and its substrate, (eIF2alpha).
imported from: go.owl
created by: rfoulger
has_exact_synonym: suppression by virus of host PKR activity by nuclear sequestration of PKR
has_exact_synonym: suppression by virus of host PKR activity by positive regulation of PKR localization to nucleus
has_exact_synonym: suppression by virus of host PKR activity by sequestering of PKR in nucleus
has_obo_namespace: biological_process
id: GO:0039582
in_subset: virus checked

suppression by virus of host PKR activity by positive regulation of PKR catabolic process
type: Class
subclass of: suppression by virus of host PKR activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by promoting the degradation of PKR via the proteosome. For example, the Rift Valley fever virus (RVFV) NSs protein induces the down-regulation of PKR by degradation through proteasomes.
imported from: go.owl
created by: rfoulger
creation date: 2012-05-02T02:49:30Z
has_exact_synonym: downregulation of PKR by degradation through proteosome
has_exact_synonym: promotion by virus of proteosome-dependent PKR degradation
has_obo_namespace: biological_process
id: GO:0039583
in_subset: virus checked

suppression by virus of host protein kinase activity
type: Class
subclass of: suppression by virus of host catalytic activity
subclass of: suppression by virus of host protein phosphorylation
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein kinase activity.
imported from: go.owl
created by: rfoulger
creation date: 2012-05-02T03:04:55Z
has_obo_namespace: biological_process
id: GO:0039584
in_subset: virus checked

modulation by virus of host PP1 activity
type: Class
subclass of: modulation by virus of host protein serine/threonine phosphatase activity
definition: The process in which a virus effects a change in host protein phosphatase-1 (PP1) activity, a serine/threonine phosphatase. Different viruses modulate host PP1 activity to remove phosphates from various cellular substrates and downregulate the host's antiviral response.
imported from: go.owl
created by: rfoulger
creation date: 2012-05-04T02:11:05Z
database_cross_reference: VZ:803
has_exact_synonym: modulation of host PP1 activity by virus
has_exact_synonym: regulation by virus of host PP1 activity
has_obo_namespace: biological_process
id: GO:0039586
in_subset: virus checked

suppression by virus of host tetherin activity
type: Class
subclass of: modulation by virus of host molecular function
definition: Any process in which a virus stops, prevents, or reduces the activity of host tetherin activity. Tetherin (also known as BST2) is an alpha interferon-inducible cellular factor that impairs the release of many enveloped viruses. By blocking tetherin activity, many viruses circumvent its antiviral effects.
imported from: go.owl
created by: rfoulger
creation date: 2012-05-04T02:33:29Z
database_cross_reference: VZ:665
has_exact_synonym: inhibition of host BST2/Tetherin by virus
has_exact_synonym: suppression by virus of host BST-2 activity
has_obo_namespace: biological_process
id: GO:0039587
in_subset: virus checked

suppression by virus of host antigen processing and presentation
type: Class
subclass of: evasion or tolerance by virus of host immune response
subclass of: modulation by virus of host immune response
definition: Any viral process that inhibits a host antigen-presenting cell expressing a peptide antigen on its cell surface in association with an MHC protein complex.
imported from: go.owl
created by: rfoulger
creation date: 2012-05-04T04:34:52Z
database_cross_reference: VZ:815
has_exact_synonym: inhibition of host proteasome antigen processing by virus
has_obo_namespace: biological_process
id: GO:0039588
in_subset: virus checked

suppression by virus of host TAP complex
type: Class
subclass of: suppression by virus of host adaptive immune response
definition: Any process in which a virus stops, prevents, or reduces the activity of the host TAP complex, a heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). The TAP complex functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum, where they are loaded onto the MHC class I. By inhibiting the TAP complex, the virus prevents viral particles being presented at the cell surface, and thus evades the host immune response.
imported from: go.owl
created by: rfoulger
creation date: 2012-06-22T14:42:06Z
database_cross_reference: VZ:817
has_exact_synonym: inhibition of host TAP by virus
has_obo_namespace: biological_process
id: GO:0039589
comment: Viruses utilize multiple mechanisms to inhibit the TAP complex, including promoting degradation of the TAP proteins, interacting with the peptide-binding site of TAP to compete with peptide binding, and interacting with TAP to inhibit ATP binding and peptide-stimulated ATP hydrolysis.

suppression by virus of host tapasin activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host antigen processing and presentation of peptide antigen via MHC class I
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host tapasin (TAP binding protein/TAPBP) activity. Tapasin is a type I transmembrane protein essential for the optimal expression of stable MHC class I molecules on the host cell surface. By inhibiting host tapasin activity, viruses can prevent presentation of their antigens at the cell surface, and thereby evade the host anti-viral immune response.
imported from: go.owl
created by: rfoulger
creation date: 2012-06-25T01:27:48Z
database_cross_reference: VZ:818
has_exact_synonym: inhibition of host TAPBP by virus
has_exact_synonym: inhibition of host tapasin by virus
has_exact_synonym: suppression by virus of host TAP binding protein
has_obo_namespace: biological_process
id: GO:0039591
in_subset: virus checked
comment: Consider also annotating to 'tapasin binding ; GO:0046980'.

suppression by virus of G2/M transition of host mitotic cell cycle
type: Class
subclass of: modulation by virus of host cell cycle
definition: Any viral process that decreases the rate or extent of progression from G2 phase to M phase of the host mitotic cell cycle.
imported from: go.owl
created by: rfoulger
creation date: 2012-06-25T02:07:18Z
database_cross_reference: VZ:876
has_exact_synonym: host G2/M cell cycle arrest by virus
has_obo_namespace: biological_process
id: GO:0039592
in_subset: virus checked

suppression by virus of host exit from mitosis
type: Class
subclass of: modulation by virus of host cell cycle
definition: Any viral process which decreases the rate or extent of a host cell leaving M phase of the cell cycle. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.
imported from: go.owl
created by: rfoulger
creation date: 2012-06-25T02:21:20Z
database_cross_reference: VZ:877
has_exact_synonym: inhibition of host mitotic exit by virus
has_obo_namespace: biological_process
id: GO:0039593
in_subset: virus checked

induction by virus of catabolism of host mRNA
type: Class
subclass of: modulation by virus of host process
definition: The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA).
imported from: go.owl
created by: rfoulger
creation date: 2012-07-04T03:14:04Z
database_cross_reference: VZ:901
has_exact_synonym: induction by virus of host mRNA catabolic process
has_exact_synonym: induction of host mRNA decay
has_exact_synonym: promotion of host mRNA degradation
has_exact_synonym: viral induction of host mRNA decay
has_exact_synonym: virus-mediated mRNA decay
has_obo_namespace: biological_process
id: GO:0039595
in_subset: virus checked

modulation by virus of host protein dephosphorylation
type: Class
subclass of: modulation by virus of host process
definition: Any viral process that modulates the frequency, rate or extent of dephosphorylation of a host protein.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-19T11:46:23Z
has_obo_namespace: biological_process
id: GO:0039596
in_subset: virus checked

induction by virus of host endoribonuclease activity
type: Class
subclass of: induction by virus of host endonucleolytic cleavage-dependent mRNA catabolic process
subclass of: induction by virus of host catalytic activity
definition: Any viral process that activates or increases the frequency, rate or extent of host endoribonuclease activity.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-04T04:36:49Z
has_exact_synonym: viral induction of host RNAse activity
has_obo_namespace: biological_process
id: GO:0039597
in_subset: virus checked
comment: GO:0039597 should be used to annotate viral proteins which utilize a host RNase to induce endonucleolytic cleavage of mRNAs (e.g. the NSP1 protein of SARS coronavirus). For viral proteins that have endoribonuclease activity themselves, consider instead annotating to: 'endoribonuclease activity involved in viral induction of host mRNA catabolic process ; GO:0039594'.

cleavage by virus of host mRNA
type: Class
subclass of: modulation by virus of host morphology or physiology
subclass of: multi-organism metabolic process
definition: Any process in which a host pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner by a viral endoribonuclease.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-04T05:09:08Z
has_exact_synonym: host mRNA cleavage by viral endoribonuclease
has_obo_namespace: biological_process
has_related_synonym: viral endoribonuclease activity involved in degradation of host mRNA
id: GO:0039599
in_subset: virus checked

induction by virus of host endonucleolytic cleavage-dependent mRNA catabolic process
type: Class
subclass of: induction by virus of catabolism of host mRNA
definition: The process in which a virus increases the frequency, rate or extent of the breakdown of host nuclear-transcribed mRNAs that begins with endonucleolytic cleavage (by either a host or a viral RNAse) to generate unprotected ends.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-04T05:23:43Z
has_exact_synonym: induction by virus of host endonucleolytic cleavage-dependent mRNA decay
has_exact_synonym: induction by virus of host nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay
has_obo_namespace: biological_process
id: GO:0039600
in_subset: virus checked
comment: Some viruses utilize a host RNase to induce endonucleolytic cleavage of template mRNAs (e.g. the NSP1 protein of SARS coronavirus); for these consider instead annotating to the child term 'induction by virus of host endoribonuclease activity ; GO:0039597'. Other viral proteins act as endonucleases themselves to cleave mRNA and then rely on the host degradation machinery to clear the resulting fragments (e.g. gamma herpesvirus SOX protein); for these cases consider instead annotating to the child term 'endoribonuclease activity involved in viral induction of host mRNA catabolic process ; GO:0039594'.

suppression by virus of host transcription initiation from RNA polymerase II promoter
type: Class
subclass of: suppression by virus of host transcription
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-05T03:29:34Z
has_alternative_id: GO:0039601
database_cross_reference: VZ:904
has_exact_synonym: inhibition of host transcription initiation by virus
has_exact_synonym: suppression by virus of host DNA-dependent transcription, initiation
has_obo_namespace: biological_process
id: GO:0039602
in_subset: virus checked

suppression by virus of host translation
type: Class
subclass of: modulation by virus of host translation
subclass of: suppression by virus of host gene expression
definition: Any process in which a virus prevents or reduces the frequency, rate or extent of translation of host mRNA.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-05T04:25:22Z
database_cross_reference: VZ:1579
has_exact_synonym: host translation shutoff by virus
has_exact_synonym: viral inhibition of cellular protein synthesis
has_exact_synonym: viral shutoff of host protein synthesis
has_obo_namespace: biological_process
id: GO:0039604
in_subset: virus checked

suppression by virus of host translation initiation
type: Class
subclass of: suppression by virus of host translation
definition: Any process in which a virus prevents or reduces the frequency, rate or extent of host translation initiation, the host process preceding formation of the peptide bond between the first two amino acids of a protein.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-05T04:44:10Z
has_obo_namespace: biological_process
id: GO:0039606
in_subset: virus checked

proteolysis by virus of host translation initiation factor
type: Class
subclass of: proteolysis in other organism
subclass of: suppression by virus of host translation initiation factor activity
definition: The chemical reactions and pathways performed by a virus resulting in the hydrolysis of a host translation initiation factor by cleavage of its peptide bonds.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-05T04:46:21Z
has_exact_synonym: cleavage of host translation initiation factor by viral protease
has_exact_synonym: proteolytic cleavage by virus of host translation initiation factor
has_exact_synonym: suppression by virus of host translation initiation factor activity by proteolysis
has_obo_namespace: biological_process
has_related_synonym: cleavage of host translation initiation factor by virus
id: GO:0039607
in_subset: virus checked

suppression by virus of host translation initiation factor activity by induction of host protein dephosphorylation
type: Class
subclass of: modulation by virus of host protein dephosphorylation
subclass of: suppression by virus of host translation initiation factor activity
definition: Any process in which a virus prevents or reduces the frequency, rate or extent of activity of a host translation initiation factor by promoting dephosphorylation of a host protein.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-06T10:30:57Z
has_obo_namespace: biological_process
id: GO:0039608
in_subset: virus checked
comment: GO:0039608 can be used to annotate viral proteins which promote dephosphorylation of a host translation initiation factor itself (e.g. eIF4E) or promote dephosphorylation of a host protein that, when un-phosphorylated, inactivates a translation initiation factor. For example, the transcriptional repressor and eIF4E-binding protein 4E-BP1 is activated by dephosphorylation upon EMCV and poliovirus infections.

suppression by virus of host translation initiation factor activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host translation initiation
definition: Any process in which a virus prevents or reduces the frequency, rate or extent of activity of a host translation initiation factor.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-06T10:27:16Z
has_broad_synonym: Inhibition of host translation factors by virus
has_exact_synonym: inhibition of activity of host translation initiation factor
has_exact_synonym: suppression by virus of host EIF-4E activity
has_narrow_synonym: inactivation of eIF2 activity
has_obo_namespace: biological_process
id: GO:0039611
in_subset: virus checked

modulation by virus of host protein phosphorylation
type: Class
subclass of: modulation by virus of host process
definition: Any viral process that modulates the frequency, rate or extent of phosphorylation of viral or host proteins in a host.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-06T11:13:59Z
has_obo_namespace: biological_process
id: GO:0039612
in_subset: virus checked

suppression by virus of host protein phosphorylation
type: Class
subclass of: modulation by virus of host protein phosphorylation
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of phosphorylation of viral or host proteins in a host.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-06T11:15:56Z
has_exact_synonym: viral inhibition of host protein phosphorylation
has_obo_namespace: biological_process
id: GO:0039613
in_subset: virus checked

induction by virus of host protein phosphorylation
type: Class
subclass of: modulation by virus of host protein phosphorylation
definition: Any process in which a virus activates or increases the frequency, rate or extent of phosphorylation of viral or host proteins in a host.
imported from: go.owl
created by: rfoulger
creation date: 2012-07-06T11:15:56Z
has_obo_namespace: biological_process
id: GO:0039614
in_subset: virus checked

killing by virus of host cell
type: Class
subclass of: killing by symbiont of host cells
subclass of: modulation by virus of host morphology or physiology
definition: Any process mediated by a virus that results in the death of a cell in the host organism.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-10T14:44:40Z
has_exact_synonym: killing by virus of host cells
has_narrow_synonym: killing by phage of host cells
has_obo_namespace: biological_process
id: GO:0039633
in_subset: goslim virus

killing by virus of host cell during superinfection exclusion
type: Class
subclass of: response to virus
subclass of: killing by virus of host cell
definition: The viral-killing of a host cell by a pre-existing virus in response to a subsequent infection of the host cell by second virus.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-10T14:46:03Z
has_exact_synonym: killing by virus of host cells during superinfection exclusion
has_exact_synonym: killing by virus of host cells involved in superinfection exclusion
has_narrow_synonym: Rex exclusion
has_obo_namespace: biological_process
id: GO:0039634

suppression by virus of host peptidoglycan biosynthetic process
type: Class
subclass of: suppression by virus of host cell wall biogenesis
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-10T14:58:12Z
has_obo_namespace: biological_process
has_related_synonym: viral inhibition of host peptidoglycan biosynthesis
id: GO:0039635

suppression by virus of host cell wall biogenesis
type: Class
subclass of: modulation by virus of host process
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of cell wall biogenesis in the host organism. Cell wall biogenesis includes the biosynthesis of constituent macromolecules, and the assembly and arrangement of these constituent parts.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-10T15:04:12Z
has_obo_namespace: biological_process
id: GO:0039636

catabolism by virus of host DNA
type: Class
subclass of: modulation by virus of host morphology or physiology
subclass of: multi-organism catabolic process
definition: The breakdown of host DNA, deoxyribonucleic acid, by a virus.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-10T15:59:22Z
has_obo_namespace: biological_process
id: GO:0039637
in_subset: virus checked

lipopolysaccharide-mediated virion attachment to host cell
type: Class
subclass of: virion attachment to host cell
definition: The process by which a virion attaches to a host cell by binding to a lipopolysaccharide (LPS) on the host cell surface.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-17T10:13:06Z
has_exact_synonym: LPS binding involved in viral attachment to host cell
has_exact_synonym: lipopolysaccharide binding involved in viral attachment to host cell
has_exact_synonym: virion attachment, binding to host lipopolysaccharide
has_obo_namespace: biological_process
id: GO:0039638
in_subset: virus checked

suppression by virus of host cell lysis in response to superinfection
type: Class
subclass of: cellular response to virus
definition: The prevention or delay of host cell lysis by a pre-existing virus in response to a subsequent infection of the host cell by second virus.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-17T10:42:27Z
has_broad_synonym: lysis inhibition
has_exact_synonym: suppression by virus of host cell lysis in response to superinfecting virus
has_obo_namespace: biological_process
id: GO:0039639

cytolysis by virus via suppression of host peptidoglycan biosynthetic process
type: Class
subclass of: cytolysis by virus of host cell
definition: The killing by a virus of host cell by cytolysis, caused by a virus stopping, preventing, or reducing peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.
imported from: go.owl
created by: rfoulger
creation date: 2012-08-17T10:54:55Z
has_obo_namespace: biological_process
id: GO:0039640

suppression by virus of host NF-kappaB transcription factor activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host transcription
definition: Any process in which a virus stops, prevents, or reduces the activity of host NF-kappaB activity.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:04:27Z
database_cross_reference: VZ:695
has_exact_synonym: inhibition of host NF-kappa-B by virus
has_obo_namespace: biological_process
id: GO:0039644

modulation by virus of host G1/S transition checkpoint
type: Class
subclass of: modulation by virus of host cell cycle
definition: Any viral process that modulates the frequency, rate or extent of the host cell G1/S transition checkpoint.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:08:57Z
database_cross_reference: VZ:880
has_exact_synonym: G1/S host cell cycle checkpoint dysregulation by virus
has_obo_namespace: biological_process
id: GO:0039645

modulation by virus of host G0/G1 transition checkpoint
type: Class
subclass of: modulation by virus of host cell cycle
definition: Any viral process that modulates the frequency, rate or extent of the host cell G0/G1 transition checkpoint.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:11:22Z
database_cross_reference: VZ:881
has_exact_synonym: G0/G1 host cell cycle checkpoint dysregulation by virus
has_obo_namespace: biological_process
id: GO:0039646
in_subset: virus checked

suppression by virus of host poly(A)-binding protein activity
type: Class
subclass of: suppression by virus of host molecular function
subclass of: suppression by virus of host translation
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host poly(A)-binding protein (PABP) activity. PABP binds to the poly(A) tail of mRNA to facilitate translation.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:14:07Z
has_exact_synonym: inhibition of host poly(A)-binding protein by virus
has_exact_synonym: suppression by virus of host PABP activity
has_obo_namespace: biological_process
id: GO:0039647

modulation by virus of host protein ubiquitination
type: Class
subclass of: modulation by virus of host process
definition: Any process in which a virus modulates the frequency, rate or extent of protein ubiquitination in the host organism. Ubiquitination is the process in which one or more ubiquitin groups are added to a protein.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:20:47Z
has_obo_namespace: biological_process
has_related_synonym: modulation of host ubiquitin pathway by virus
id: GO:0039648

modulation by virus of host ubiquitin-protein ligase activity
type: Class
subclass of: modulation by virus of host catalytic activity
subclass of: modulation by virus of host protein ubiquitination
definition: The process in which a virus effects a change in host ubiquitin-protein ligase activity. Ubiquitin-protein ligase activity catalyzes the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:26:56Z
has_narrow_synonym: modulation of host E3 ubiquitin ligases by virus
has_obo_namespace: biological_process
id: GO:0039649
in_subset: virus checked

suppression by virus of host cysteine-type endopeptidase activity involved in apoptotic process
type: Class
subclass of: suppression by virus of host apoptotic process
subclass of: suppression by virus of host catalytic activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host caspase activity. Caspases are cysteine-type endopeptidases which contribute to the apoptotic process.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:30:48Z
has_narrow_synonym: inhibition of host caspases by virus
has_obo_namespace: biological_process
id: GO:0039650

induction by virus of host cysteine-type endopeptidase activity involved in apoptotic process
type: Class
subclass of: induction by virus of host apoptotic process
subclass of: induction by virus of host catalytic activity
definition: Any process in which a virus increases the frequency, rate or extent of host cysteine-type endopeptidase activity (also called caspase activity) which contributes to the apoptotic process.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-09T15:44:29Z
has_narrow_synonym: activation of host caspases by virus
has_narrow_synonym: induction by virus of host caspase activity
has_obo_namespace: biological_process
id: GO:0039651

activation by virus of host NF-kappaB transcription factor activity
type: Class
subclass of: modulation by virus of host transcription
subclass of: modulation by virus of host molecular function
definition: Any process in which a virus starts, promotes, or enhances the activity of the host transcription factor NF-kappaB.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-11T16:04:31Z
database_cross_reference: VZ:841
has_exact_synonym: activation of host NF-kappa-B by virus
has_obo_namespace: biological_process
id: GO:0039652
in_subset: virus checked

suppression by virus of host transcription
type: Class
subclass of: modulation by virus of host transcription
subclass of: suppression by virus of host gene expression
definition: Any process in which a virus stops, prevents, or reduces the activity of host DNA-dependent transcription; the cellular synthesis of RNA on a template of DNA. Viral proteins can interfere with either host RNA polymerase or with transcription factors.
imported from: go.owl
created by: rfoulger
creation date: 2012-10-11T16:11:17Z
database_cross_reference: VZ:1577
has_exact_synonym: suppression by virus of host DNA-dependent transcription
has_narrow_synonym: host transcription shutoff by virus
has_obo_namespace: biological_process
id: GO:0039653

fusion of virus membrane with host endosome membrane
type: Class
subclass of: membrane fusion involved in viral entry into host cell
definition: Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.
imported from: go.owl
created by: rfoulger
creation date: 2013-06-20T14:24:05Z
has_alternative_id: GO:0075501
has_alternative_id: GO:0075517
database_cross_reference: VZ:992
has_exact_synonym: fusion of virus membrane with host endosomal membrane
has_narrow_synonym: viral entry into host cell via caveolae-mediated endocytosis followed by membrane fusion with the endosome membrane
has_narrow_synonym: viral entry into host cell via caveolin-mediated endocytosis followed by membrane fusion with the endosome membrane
has_narrow_synonym: viral entry into host cell via clathrin-mediated endocytosis followed by membrane fusion with the endosome membrane
has_narrow_synonym: viral penetration via endocytosis followed by caveolae-mediated membrane fusion with the endosome membrane
has_narrow_synonym: viral penetration via endocytosis followed by clathrin-mediated membrane fusion with the endosome membrane
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via endocytosis followed by membrane fusion with host endosome
has_related_synonym: viral entry into host cell via endocytosis followed by membrane fusion with the endosome membrane
id: GO:0039654

transport of virus in host, cell to cell via plasmodesmata
type: Class
subclass of: transport of virus in host, cell to cell
subclass of: multi-organism plasmodesmata-mediated intercellular transport
definition: The transport of a virus between adjacent cells in a multicellular organism using plasmodesmata. Plasmodesma is a fine cytoplasmic channel found in all higher plants, which connects the cytoplasm of one cell to that of an adjacent cell.
imported from: go.owl
created by: rfoulger
creation date: 2013-06-20T14:47:50Z
database_cross_reference: VZ:1018
has_obo_namespace: biological_process
has_related_synonym: spread of virus in host, cell to cell via plasmodesmata
has_related_synonym: viral movement protein
id: GO:0039655
in_subset: virus checked

modulation by virus of host gene expression
type: Class
subclass of: modulation by virus of host process
definition: The process in which a virus effects a change in gene expression in its host organism. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form.
imported from: go.owl
created by: rfoulger
creation date: 2013-06-20T15:28:26Z
has_obo_namespace: biological_process
has_related_synonym: regulation by virus of host gene expression
id: GO:0039656
in_subset: goslim virus
in_subset: virus checked

suppression by virus of host gene expression
type: Class
subclass of: modulation by virus of host gene expression
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of gene expression in the host organism. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form.
imported from: go.owl
created by: rfoulger
creation date: 2013-06-20T15:29:55Z
database_cross_reference: VZ:1582
has_exact_synonym: host gene expression shutoff by virus
has_obo_namespace: biological_process
id: GO:0039657

suppression by virus of host TBK1-IKBKE-DDX3 complex activity
type: Class
subclass of: modulation by virus of host morphology or physiology
definition: Any process in which a virus stops, prevents, or reduces the activity of the host TBK1-IKBKE-DDX3 complex.
imported from: go.owl
created by: rfoulger
creation date: 2013-07-15T15:10:39Z
database_cross_reference: VZ:719
has_exact_synonym: inhibition of host TBK1-IKBKE-DDX3 complex by virus
has_exact_synonym: suppression by virus of host TBK1-IKKE-DDX3 complex activity
has_obo_namespace: biological_process
id: GO:0039659
comment: See also: suppression by virus of host TBK1 activity ; GO:0039723, and suppression by virus of host IKBKE activity ; GO:0039724.

membrane fusion involved in viral entry into host cell
type: Class
subclass of: multi-organism membrane fusion
definition: Merging of the virion membrane and a host membrane (host plasma membrane or host organelle membrane) that is involved in the uptake of a virus into a host cell.
imported from: go.owl
created by: rfoulger
creation date: 2013-08-29T10:15:11Z
has_obo_namespace: biological_process
has_related_synonym: fusion of virus membrane with host membrane
has_related_synonym: fusion of virus membrane with host membrane during viral entry
has_related_synonym: viral entry into host cell via membrane fusion
id: GO:0039663

lysis of host organelle involved in viral entry into host cell
type: Class
subclass of: viral process
definition: The viral-induced lysis of an organelle (endosome, lysosome, or caveosome) that is involved in the uptake of a virus into a host cell. Occurs once the virus is within the organelle, and results in transfer of the viral contents from the organelle compartment into the cytoplasm.
imported from: go.owl
created by: rfoulger
creation date: 2013-08-29T11:30:18Z
database_cross_reference: VZ:984
has_exact_synonym: viral penetration via lysis of host organellar membrane
has_narrow_synonym: viral entry into host cell via endosome membrane lysis
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via lysis of host organelle membrane
has_related_synonym: viral membrane-lytic protein
id: GO:0039664

permeabilization of host organelle membrane involved in viral entry into host cell
type: Class
subclass of: viral process
definition: Induction of organellar membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with a viral capsid. Results in release of the virus contents from an organelle into the host cell cytoplasm.
imported from: go.owl
created by: rfoulger
creation date: 2013-08-29T11:57:21Z
database_cross_reference: VZ:985
has_exact_synonym: viral penetration via permeabilization of host organellar membrane
has_exact_synonym: viral penetration via host endosomal membrane disruption by virus
has_exact_synonym: viral penetration via perforation of host organellar membrane by virus
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via permeabilization of host organelle membrane
has_related_synonym: viral membrane-penetration protein
id: GO:0039665

virion attachment to host cell pilus
type: Class
subclass of: virion attachment to host cell
definition: The process by which a virion attaches to a host cell by binding to a pilus on the host cell surface. Pili are retractile filaments that protrude from gram-negative bacteria. Filamentous viruses can attach to the pilus tip, whereas icosahedral viruses can attach to the pilus side.
imported from: go.owl
created by: rfoulger
creation date: 2013-08-29T13:31:10Z
database_cross_reference: VZ:981
has_exact_synonym: pilus-adsorption protein
has_exact_synonym: pilus-mediated viral adsorption onto host cell
has_obo_namespace: biological_process
has_related_synonym: pilus-mediated viral adsorption onto host cell
has_related_synonym: pilus-mediated viral attachment to host cell
has_related_synonym: viral attachment to host cell pilus
id: GO:0039666
in_subset: virus checked

viral entry into host cell via pilus retraction
type: Class
subclass of: viral entry into host cell
definition: The uptake of a virus or viral genetic material into a host cell which occurs through retraction of a virion-bound pilus.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-04T14:32:19Z
has_obo_namespace: biological_process
id: GO:0039667
comment: This method of entry into the cell differs between viruses; filamentous bacteriophages have rod-shaped virions which attach to the tip of the pilus; after retraction of the pilus with the virion attached, the genome can enter the host cell through the pilus basal pore. For icosahedral viruses, retraction of the pilus brings the virus in contact with the cell membrane and the genome can enter the cell via membrane fusion or genome injection. In GO, viral entry begins after viral attachment; for pilus-attachment proteins see instead: viral attachment to host cell pilus ; GO:0039666.

viral entry into host cell via pilus basal pore
type: Class
subclass of: viral entry into host cell via pilus retraction
definition: The uptake of a virus or viral genetic material into a host cell which occurs through retraction of the virion-bound pilus, followed by entry of the viral genome into the host cell through the pilus basal pore. Filamentous bacteriophages absorb to the tip of the F-pili and can enter the bacterial cell in this way.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-04T14:33:18Z
has_narrow_synonym: filamentous viral entry into host cell via pilus retraction
has_obo_namespace: biological_process
id: GO:0039668

viral entry into host cell via pilus retraction and membrane fusion
type: Class
subclass of: viral entry into host cell via pilus retraction
definition: The uptake of a virus into a host cell which occurs via retraction of the viral-bound pilus to bring the virus in contact with the host cell membrane, followed by fusion of the bacteriophage membrane with the host outer membrane.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-04T14:35:44Z
has_obo_namespace: biological_process
id: GO:0039669
comment: For annotation of viral pilus-binding proteins, see also 'viral attachment to host cell pilus ; GO:0039666'.

evasion by virus of host natural killer cell activity
type: Class
subclass of: evasion or tolerance by virus of host immune response
definition: Any process by which a virus avoids the effects mediated by the host organism's natural killer (NK) cells.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-25T11:04:53Z
has_exact_synonym: evasion by virus of host NK cell killing
has_exact_synonym: evasion by virus of host natural killer cell response
has_exact_synonym: protection by virus against host NK cell cytotoxicity
has_exact_synonym: suppression by virus of host natural killer cell function
has_exact_synonym: viral immunoevasion of host NK cell
has_obo_namespace: biological_process
has_related_synonym: modulation of host NK-cell activity by virus
id: GO:0039671

suppression by virus of host natural killer cell activation
type: Class
subclass of: evasion by virus of host natural killer cell activity
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of natural killer cell activation in the host.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-25T11:08:19Z
has_exact_synonym: suppression by virus of host NK-cell activation
has_obo_namespace: biological_process
id: GO:0039672

evasion by virus of host dendritic cell activity
type: Class
subclass of: evasion or tolerance by virus of host immune response
definition: Any process by which a virus avoids the effects mediated by the host organism's dendritic cells.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-25T11:18:51Z
has_broad_synonym: modulation of host dendritic cell activity by virus
has_exact_synonym: evasion by virus of host dendritic cell response
has_exact_synonym: impairing dendritic cell function by virus
has_obo_namespace: biological_process
id: GO:0039673

exit of virus from host cell nucleus
type: Class
subclass of: intracellular transport of virus
definition: The directed movement of the viral genome or a viral particle out of the host cell nucleus.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-25T13:59:41Z
database_cross_reference: VZ:2177
has_obo_namespace: biological_process
id: GO:0039674
in_subset: goslim virus
in_subset: virus checked

exit of virus from host cell nucleus through nuclear pore
type: Class
subclass of: exit of virus from host cell nucleus
definition: The directed movement of the viral genome or a viral particle out of the host cell nucleus through the nuclear pore.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-25T14:10:03Z
database_cross_reference: VZ:1953
has_exact_synonym: exit of virus from host cell nucleus through nuclear pore complex
has_exact_synonym: nuclear pore exit of virus
has_exact_synonym: viral enome export through nuclear pore
has_obo_namespace: biological_process
id: GO:0039675
in_subset: virus checked

exit of virus from host cell nucleus via nuclear envelope disassembly
type: Class
subclass of: exit of virus from host cell nucleus
definition: The directed movement of the viral genome or a viral particle out of the host cell nucleus that involves disruption of the nuclear membrane envelope by the virus.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-25T14:10:03Z
database_cross_reference: VZ:2176
has_exact_synonym: exit of virus from host cell nucleus via nuclear envelope breakdown
has_obo_namespace: biological_process
id: GO:0039677
in_subset: virus checked

viral genome ejection through host cell envelope
type: Class
subclass of: viral entry into host cell
subclass of: transport of virus
definition: Ejection by a non-enveloped prokaryotic virus of its genome into the host cytoplasm. Caudovirales carry an ejection apparatus that can be long and contractile, long and noncontractile, or short, and is able to penetrate the host cell envelope to deliver the viral genome into the host cell cytoplasm.
imported from: go.owl
created by: rfoulger
creation date: 2013-09-26T11:56:48Z
has_narrow_synonym: phage genome ejection
has_narrow_synonym: viral genome injection through bacterial membranes
has_obo_namespace: biological_process
id: GO:0039678
comment: When a pore-forming protein is involved, see also 'pore-mediated entry of viral genome into host cell ; GO:0044694'.

actin-dependent intracellular transport of virus towards nucleus
type: Class
subclass of: actin-dependent intracellular transport of virus
subclass of: transport of viral material towards nucleus
definition: The directed movement of a virus, or part of a virus, towards the host cell nucleus using actin filaments.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-10T11:24:56Z
database_cross_reference: VZ:991
has_exact_synonym: actin-dependent intracellular transport of viral material towards nucleus
has_exact_synonym: actin-dependent inwards viral transport
has_obo_namespace: biological_process
id: GO:0039680
in_subset: virus checked

rolling circle viral DNA replication
type: Class
subclass of: viral DNA strand displacement replication
definition: A process of unidirectional viral DNA replication that takes place on a circular DNA to rapidly produce numerous copies of the viral genome. Involves creating a nick in one strand of the circular DNA molecule at the origin of replication. DNA is then synthesized by DNA polymerase. Using the non-nicked strand as a template, replication proceeds around the circular DNA molecule, displacing the nicked strand as single-stranded DNA.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T14:13:51Z
has_obo_namespace: biological_process
id: GO:0039682
in_subset: virus checked

rolling circle double-stranded viral DNA replication
type: Class
subclass of: rolling circle viral DNA replication
definition: A rolling circle viral DNA replication that begins with a double-stranded viral DNA genome.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T14:15:04Z
database_cross_reference: VZ:2676
has_exact_synonym: dsDNA rolling circle replication
has_obo_namespace: biological_process
id: GO:0039683
in_subset: virus checked

rolling circle single-stranded viral DNA replication
type: Class
subclass of: rolling circle viral DNA replication
definition: A rolling circle viral DNA replication that begins with a single-stranded viral DNA genome.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T14:15:48Z
database_cross_reference: VZ:1941
has_exact_synonym: ssDNA rolling circle replication
has_obo_namespace: biological_process
id: GO:0039684
in_subset: virus checked

rolling hairpin viral DNA replication
type: Class
subclass of: viral DNA genome replication
definition: A viral DNA replication process where a 3' hairpin structure in the viral single-stranded DNA (ssDNA) template serves as a primer for host enzymes to synthesize DNA.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T14:33:55Z
database_cross_reference: VZ:2656
has_exact_synonym: ssDNA rolling hairpin viral DNA replication
has_obo_namespace: biological_process
id: GO:0039685

bidirectional double-stranded viral DNA replication
type: Class
subclass of: viral DNA genome replication
definition: A viral DNA replication process where replication occurs in both directions from the starting point. This creates two replication forks, moving in opposite directions.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T14:42:09Z
database_cross_reference: VZ:1939
has_exact_synonym: viral bidirectional dsDNA replication
has_obo_namespace: biological_process
id: GO:0039686
in_subset: virus checked

viral DNA strand displacement replication
type: Class
subclass of: viral DNA genome replication
definition: A viral DNA replication process where only one strand is replicated at once, and which releases a single stranded DNA (ssDNA).
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T14:48:40Z
database_cross_reference: VZ:1940
has_obo_namespace: biological_process
id: GO:0039687
in_subset: virus checked

viral double stranded DNA replication via reverse transcription
type: Class
subclass of: viral DNA genome replication
definition: A DNA replication process that uses viral RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T15:00:08Z
database_cross_reference: VZ:1938
has_exact_synonym: dsDNA replication via RNA intermediate
has_exact_synonym: viral RNA-dependent DNA replication
has_obo_namespace: biological_process
has_related_synonym: RNA-dependent viral DNA replication
id: GO:0039688
in_subset: virus checked

negative stranded viral RNA replication
type: Class
subclass of: viral RNA genome replication
subclass of: multi-organism biosynthetic process
definition: A viral genome replication process where the template genome is negative stranded, single stranded RNA ((-)ssRNA).
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T15:40:27Z
database_cross_reference: VZ:1096
has_exact_synonym: (-)ss viral RNA replication
has_obo_namespace: biological_process
id: GO:0039689
in_subset: virus checked

positive stranded viral RNA replication
type: Class
subclass of: viral RNA genome replication
subclass of: multi-organism biosynthetic process
definition: A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T15:45:40Z
database_cross_reference: VZ:1116
has_obo_namespace: biological_process
has_related_synonym: ss(+) viral RNA replication
id: GO:0039690
in_subset: virus checked

double stranded viral RNA replication
type: Class
subclass of: viral RNA genome replication
subclass of: multi-organism biosynthetic process
definition: A viral genome replication process where the template genome is double stranded RNA (dsRNA). Genomic dsRNA is first transcribed into single-stranded (ss) mRNA, which is then replicated to ds-genomic RNA.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T15:52:19Z
database_cross_reference: VZ:1936
has_obo_namespace: biological_process
id: GO:0039691
in_subset: virus checked

single stranded viral RNA replication via double stranded DNA intermediate
type: Class
subclass of: viral RNA genome replication
definition: A viral genome replication where the template is single-stranded RNA (ssRNA), and which proceeds via a double stranded DNA (dsDNA) intermediate molecule. Viral genomic RNA is first reverse transcribed into dsDNA, which integrates into the host chromosomal DNA, where it is transcribed by host RNA polymerase II.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-17T15:59:43Z
has_alternative_id: GO:0045090
database_cross_reference: VZ:1937
has_exact_synonym: retroviral genome replication
has_obo_namespace: biological_process
has_related_synonym: viral ssRNA replication via dsDNA intermediate
id: GO:0039692

viral DNA genome replication
type: Class
subclass of: viral genome replication
subclass of: multi-organism biosynthetic process
definition: The replication of a viral DNA genome.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-23T15:22:31Z
has_alternative_id: GO:0039681
has_exact_synonym: DNA-dependent viral DNA replication
has_exact_synonym: viral DNA replication
has_exact_synonym: viral DNA-dependent DNA replication
has_obo_namespace: biological_process
id: GO:0039693
in_subset: virus checked

viral RNA genome replication
type: Class
subclass of: viral genome replication
subclass of: multi-organism metabolic process
definition: The replication of a viral RNA genome.
imported from: go.owl
created by: rfoulger
creation date: 2013-10-23T15:24:36Z
has_obo_namespace: biological_process
id: GO:0039694
in_subset: virus checked

viral mRNA cap methylation
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: multi-organism metabolic process
definition: Methylation of the 2'-O-ribose of the first or second transcribed nucleotide of a viral mRNA. Methylation allows evasion of the host innate immune response, which degrades cap0 (non-methylated) mRNAs.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-06T14:39:17Z
has_exact_synonym: IFIT mRNA restriction evasion by virus
has_obo_namespace: biological_process
id: GO:0039699

fusion of viral membrane with host outer nuclear membrane
type: Class
subclass of: multi-organism membrane fusion
definition: Fusion of a viral primary envelope with the host outer nuclear membrane during nuclear egress. The transitory primary envelope is acquired by the virus as it buds at the inner nuclear membrane and gains access to the perinuclear space. This membrane is lost by fusing with the host outer nuclear membrane during nuclear exit.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-06T15:07:46Z
has_exact_synonym: fusion of viral membrane with host outer nuclear membrane involved in nuclear egress
has_exact_synonym: viral primary envelope fusion with host outer nuclear membrane
has_obo_namespace: biological_process
id: GO:0039700

microtubule-dependent intracellular transport of viral material towards cell periphery
type: Class
subclass of: microtubule-dependent intracellular transport of viral material
definition: The directed movement of the viral genome or a viral particle towards the cell periphery using host microtubules. Mostly used by viruses that replicate their genome near or in the nucleus to allows newly assembled viral progeny to reach the plasma membrane.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-06T16:09:57Z
database_cross_reference: VZ:1816
has_obo_namespace: biological_process
id: GO:0039701
in_subset: virus checked

viral budding via host ESCRT complex
type: Class
subclass of: viral budding
definition: Viral budding which uses a host ESCRT protein complex, or complexes, to mediate the budding process.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-06T16:51:53Z
has_broad_synonym: host-assisted viral budding
database_cross_reference: VZ:1536
has_obo_namespace: biological_process
has_related_synonym: viral budding through the ESCRT machinery
id: GO:0039702

pore formation by virus in membrane of host cell
type: Class
subclass of: viral process
subclass of: pore formation in membrane of host by symbiont
definition: The aggregation, arrangement and bonding together of a set of components by a virus to form a pore complex in a membrane of a host organism.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-25T15:33:33Z
has_exact_synonym: pore formation in membrane of host cell by virus
has_obo_namespace: biological_process
has_related_synonym: viroporin
id: GO:0039707
in_subset: goslim virus

nuclear capsid assembly
type: Class
subclass of: viral capsid assembly
definition: The assembly of a virus capsid that occurs in the nucleus. The assembly of large icosahedral shells for herpesviridae and adenoviridae requires structural proteins that act as chaperones for assembly.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-28T15:08:41Z
database_cross_reference: VZ:1516
has_obo_namespace: biological_process
id: GO:0039708
in_subset: virus checked

cytoplasmic capsid assembly
type: Class
subclass of: viral capsid assembly
definition: The assembly of a virus capsid that occurs in the cytoplasm.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-28T15:12:30Z
database_cross_reference: VZ:1950
has_obo_namespace: biological_process
id: GO:0039709

cytoplasmic icosahedral capsid assembly
type: Class
subclass of: cytoplasmic capsid assembly
definition: The assembly of an icosahedral viral capsid in the cytoplasm. Often occurs by assembling around the viral genome.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-28T15:20:50Z
has_obo_namespace: biological_process
id: GO:0039710
in_subset: virus checked

cytoplasmic helical capsid assembly
type: Class
subclass of: cytoplasmic capsid assembly
definition: The assembly of a helical viral capsid in the cytoplasm. Occurs by assembling around the viral genome.
imported from: go.owl
created by: rfoulger
creation date: 2013-11-28T15:23:39Z
has_obo_namespace: biological_process
id: GO:0039711

induction by virus of host catalytic activity
type: Class
subclass of: modulation by virus of host catalytic activity
subclass of: positive regulation by symbiont of host catalytic activity
definition: Any viral process that activates or increases the frequency, rate or extent of host catalytic activity.
imported from: go.owl
created by: rfoulger
creation date: 2013-12-19T13:21:45Z
has_exact_synonym: induction by virus of host enzyme activity
has_obo_namespace: biological_process
id: GO:0039712

suppression by virus of host toll-like receptor signaling pathway
type: Class
subclass of: suppression by virus of host innate immune response
definition: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of toll-like receptor (TLR) signaling in the host organism.
imported from: go.owl
created by: rfoulger
creation date: 2014-01-06T11:39:58Z
has_exact_synonym: inhibition of host TLR pathway by virus
has_exact_synonym: suppression by virus of host TLR signaling pathway
has_obo_namespace: biological_process
id: GO:0039722

suppression by virus of host TBK1 activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host protein kinase activity
definition: Any process in which a virus stops, prevents, or reduces the activity of the host serine/threonine kinase TBK1.
imported from: go.owl
created by: rfoulger
creation date: 2014-01-06T12:04:44Z
has_exact_synonym: inhibition of host TBK1 by virus
has_obo_namespace: biological_process
id: GO:0039723
comment: When TBK1 acts as part of a TBK1-IKBKE-DDX3 complex, consider also annotating to: suppression by virus of host TBK1-IKBKE-DDX3 complex activity ; GO:0039659.

suppression by virus of host IKBKE activity
type: Class
subclass of: suppression by virus of host innate immune response
subclass of: suppression by virus of host molecular function
definition: Any process in which a virus stops, prevents, or reduces the activity of the host I-kappa-B kinase epsilon (IKBKE/IKK-epsilon/IKK-E).
imported from: go.owl
created by: rfoulger
creation date: 2014-01-06T12:15:03Z
has_exact_synonym: inhibition of host IKBKE by virus
has_obo_namespace: biological_process
id: GO:0039724
comment: When IKBKE acts as part of a TBK1-IKBKE-DDX3 complex, consider also annotating to: suppression by virus of host TBK1-IKBKE-DDX3 complex activity ; GO:0039659.

translocation of peptides or proteins into host
type: Class
subclass of: translocation of molecules into host
subclass of: translocation of peptides or proteins into other organism involved in symbiotic interaction
definition: The directed movement of peptides or proteins produced by an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: transport of peptides or proteins into host
has_obo_namespace: biological_process
id: GO:0042000
in_subset: gosubset prok

biofilm formation
type: Class
subclass of: multi-organism cellular process
definition: A process in which microorganisms irreversibly attach to and grow on a surface and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0042710
in_subset: goslim candida
in_subset: goslim pir
in_subset: gosubset prok

maternal behavior
type: Class
subclass of: parental behavior
definition: Female behaviors associated with the care and rearing of offspring.
imported from: go.owl
has_exact_synonym: maternal behaviour
has_obo_namespace: biological_process
id: GO:0042711

paternal behavior
type: Class
subclass of: parental behavior
definition: Male behaviors associated with the care and rearing offspring.
imported from: go.owl
has_exact_synonym: paternal behaviour
has_obo_namespace: biological_process
id: GO:0042712

defense response to bacterium
type: Class
subclass of: response to bacterium
subclass of: defense response to other organism
definition: Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
imported from: go.owl
has_alternative_id: GO:0042830
has_exact_synonym: defence response to bacteria
has_exact_synonym: defence response to bacterium
has_exact_synonym: defense response to bacteria
has_obo_namespace: biological_process
has_related_synonym: antibacterial peptide activity
id: GO:0042742
in_subset: gosubset prok

passive evasion of host immune response
type: Class
subclass of: evasion or tolerance of host immune response
subclass of: passive evasion of immune response of other organism involved in symbiotic interaction
definition: Any mechanism of immune avoidance that does not directly interfere with the host immune system; for example, some viruses enter a state of latency where their protein production is drastically downregulated, meaning that they are not detected by the host immune system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_broad_synonym: passive immune evasion
has_obo_namespace: biological_process
id: GO:0042782
in_subset: gosubset prok

active evasion of host immune response
type: Class
subclass of: evasion or tolerance of host immune response
subclass of: active evasion of immune response of other organism involved in symbiotic interaction
definition: Any mechanism of immune avoidance that directly affects the host immune system, e.g. blocking any stage in host MHC class I and II presentation. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_broad_synonym: active immune evasion
has_obo_namespace: biological_process
id: GO:0042783
in_subset: gosubset prok

active evasion of host immune response via regulation of host complement system
type: Class
subclass of: active evasion of host immune response
subclass of: active evasion of immune response of other organism via regulation of complement system of other organism involved in symbiotic interaction
definition: Any mechanism of active immune avoidance which works by regulating the host complement system, e.g. by possessing complement receptors which mediate attachment to, then infection of, host macrophages, which are eventually destroyed. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active immune evasion via modulation of host complement system
has_exact_synonym: active immune evasion via regulation of host complement system
has_obo_namespace: biological_process
id: GO:0042784

active evasion of host immune response via regulation of host cytokine network
type: Class
subclass of: active evasion of host immune response
subclass of: active evasion of immune response of other organism via regulation of cytokine network of other organism involved in symbiotic interaction
definition: Any mechanism of active immune avoidance which works by regulating host cytokine networks, e.g. by secreting proteins that mimic cytokine receptors that act to sequester host cytokines and inhibit action. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active immune evasion via modulation of host cytokine network
has_exact_synonym: active immune evasion via regulation of host cytokine network
has_obo_namespace: biological_process
id: GO:0042785

active evasion of host immune response via regulation of host antigen processing and presentation
type: Class
subclass of: active evasion of host immune response
definition: Any mechanism of active immune avoidance which works by regulating the host's antigen processing or presentation pathways, e.g. by blocking any stage in MHC class II presentation. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active evasion of host immune response via regulation of host antigen processing and presentation pathway
has_exact_synonym: active immune evasion via modulation of antigen processing and presentation
has_exact_synonym: active immune evasion via modulation of antigen processing/presentation
has_exact_synonym: active immune evasion via regulation of antigen processing and presentation
has_obo_namespace: biological_process
id: GO:0042786

defense response to protozoan
type: Class
subclass of: response to protozoan
subclass of: defense response to other organism
definition: Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism.
imported from: go.owl
has_exact_synonym: defence response to pathogenic protozoa
has_exact_synonym: defence response to protozoa
has_exact_synonym: defence response to protozoon
has_exact_synonym: defense response to pathogenic protozoa
has_exact_synonym: defense response to protozoa
has_exact_synonym: defense response to protozoon
has_obo_namespace: biological_process
id: GO:0042832

induction of bacterial agglutination
type: Class
subclass of: antibacterial humoral response
definition: Any process in which infecting bacteria are clumped together by a host organism.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043152

cell-cell adhesion involved in flocculation
type: Class
subclass of: multi-organismal cell-cell adhesion
definition: The attachment of one single cell organism to another via adhesion molecules, occurring as a part of flocculation.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043689
in_subset: gosubset prok

cell-cell adhesion involved in flocculation via cell wall protein-carbohydrate interaction
type: Class
subclass of: cell-cell adhesion involved in flocculation
definition: The attachment of one single cell organism to another during flocculation via the interaction a protein in the cell wall of one cell with a carbohyrdate in the cell wall of another In Saccharomyces this process is mannose-sensitve.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043690
in_subset: gosubset prok

heterophilic cell adhesion involved in cytoadherence to microvasculature, mediated by parasite protein
type: Class
subclass of: multi-organismal cell-cell adhesion
definition: The attachment of a parasite adhesion molecule to a nonidentical adhesion molecule on the microvasculature of a host cell, thereby adhering the parasite to the host cell.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043706

modulation by host of viral transcription
type: Class
subclass of: modulation by host of symbiont transcription
definition: Any process in which a host organism modulates the frequency, rate or extent of viral transcription.
imported from: go.owl
has_exact_synonym: regulation by host of viral transcription
has_exact_synonym: regulation of viral transcription by host
has_obo_namespace: biological_process
id: GO:0043921

negative regulation by host of viral transcription
type: Class
subclass of: modulation by host of viral transcription
definition: Any process in which a host organism stops, prevents, or reduces the frequency, rate or extent of viral transcription.
imported from: go.owl
has_exact_synonym: negative regulation of viral transcription by host
has_obo_namespace: biological_process
id: GO:0043922

positive regulation by host of viral transcription
type: Class
subclass of: modulation by host of viral transcription
definition: Any process is which a host organism activates or increases the frequency, rate or extent of viral transcription, the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
imported from: go.owl
has_exact_synonym: positive regulation of viral transcription by host
has_obo_namespace: biological_process
id: GO:0043923

positive regulation of catalytic activity in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of catalytic activity in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation of enzyme activity in other organism
has_narrow_synonym: activation of enzyme activity in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation of catalytic activity in other organism during symbiotic interaction
has_related_synonym: up regulation of enzyme activity in other organism during symbiotic interaction
has_related_synonym: up-regulation of enzyme activity in other organism during symbiotic interaction
has_related_synonym: upregulation of enzyme activity in other organism during symbiotic interaction
id: GO:0043946
in_subset: gosubset prok

positive regulation by host of symbiont catalytic activity
type: Class
subclass of: positive regulation of catalytic activity in other organism involved in symbiotic interaction
subclass of: negative regulation by host of symbiont molecular function
subclass of: modulation by host of symbiont catalytic activity
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by host of symbiont enzyme activity
has_exact_synonym: up regulation by host of symbiont enzyme activity
has_exact_synonym: up-regulation by host of symbiont enzyme activity
has_exact_synonym: upregulation by host of symbiont enzyme activity
has_narrow_synonym: activation by host of symbiont enzyme activity
has_narrow_synonym: activation of symbiont enzyme activity
has_obo_namespace: biological_process
id: GO:0043947

positive regulation by symbiont of host catalytic activity
type: Class
subclass of: positive regulation of catalytic activity in other organism involved in symbiotic interaction
subclass of: negative regulation by symbiont of host molecular function
subclass of: modulation by symbiont of host catalytic activity
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of host enzyme activity
has_exact_synonym: up regulation by symbiont of host enzyme activity
has_exact_synonym: up-regulation by symbiont of host enzyme activity
has_exact_synonym: upregulation by symbiont of host enzyme activity
has_narrow_synonym: activation by symbiont of host enzyme activity
has_narrow_synonym: activation of host enzyme activity
has_obo_namespace: biological_process
id: GO:0043948
in_subset: gosubset prok

negative regulation by host of symbiont adenylate cyclase-mediated signal transduction
type: Class
subclass of: negative regulation by host of symbiont signal transduction pathway
subclass of: modulation by host of symbiont adenylate cyclase-mediated signal transduction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043962
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host adenylate cyclase-mediated signal transduction; GO:0075336".

modulation by symbiont of host adenylate cyclase-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which the symbiont modulates the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043963
in_subset: gosubset prok

positive regulation by symbiont of host adenylate cyclase-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host adenylate cyclase-mediated signal transduction
subclass of: positive regulation by symbiont of host signal transduction pathway
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043964
in_subset: gosubset prok

negative regulation by symbiont of host adenylate cyclase-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host adenylate cyclase-mediated signal transduction
subclass of: negative regulation by symbiont of host signal transduction pathway
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0043965
in_subset: gosubset prok

movement in host
type: Class
subclass of: movement in host environment
definition: The process in which an organism or its progeny spreads from one location to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: movement of symbiont in host
has_exact_synonym: movement of symbiont within host
has_exact_synonym: movement within host
has_exact_synonym: symbiont movement in host
has_obo_namespace: biological_process
has_related_synonym: symbiont movement within host
id: GO:0044000
in_subset: gosubset prok

migration in host
type: Class
subclass of: movement in host
definition: The directional movement of an organism from one place to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: migration within host
has_obo_namespace: biological_process
id: GO:0044001
in_subset: gosubset prok

acquisition of nutrients from host
type: Class
subclass of: interaction with host
subclass of: multi-organism behavior
definition: The process that begins with the production and formation of structures and molecules in an organism that are required for the acquisition and utilization of nutrients from its host organism, and the ends with the acquirement of the nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044002
in_subset: gosubset prok

modification by symbiont of host morphology or physiology
type: Class
subclass of: interaction with host
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The process in which a symbiont organism effects a change in the structure or processes of its host organism.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044003
in_subset: gosubset prok

disruption by symbiont of host cell
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: disruption of cells of other organism involved in symbiotic interaction
definition: Any process in which an organism has a negative effect on the functioning of the host's cells. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044004
in_subset: gosubset prok

induction by symbiont in host of tumor, nodule, or growth
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: induction of tumor, nodule, or growth in other organism involved in symbiotic interaction
definition: The process in which an organism causes the formation of a mass of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044005
in_subset: gosubset prok

induction by symbiont in host of tumor, nodule, or growth containing transformed cells
type: Class
subclass of: induction by symbiont in host of tumor, nodule, or growth
subclass of: induction of tumor, nodule, or growth containing transformed cells in other organism involved in symbiotic interaction
definition: The process in which an organism causes the formation in its host organism of a growth whose cells have been transformed and continue to exist in the absence of the first organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044006

dissemination or transmission of symbiont from host
type: Class
subclass of: interaction with host
definition: The movement of an organism from a host to another host or from a host to another place in the environment. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: dissemination or transmission of organism from host
has_obo_namespace: biological_process
id: GO:0044007
in_subset: gosubset prok

dissemination or transmission of symbiont from host by vector
type: Class
subclass of: dissemination or transmission of symbiont from host
definition: The movement of an organism from one host to another (or another place in the environment) by means of a third organism (often an insect or other animal). The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: dissemination or transmission of organism from host by vector
has_obo_namespace: biological_process
id: GO:0044008
in_subset: gosubset prok

viral transmission by vector
type: Class
subclass of: transmission of virus
subclass of: dissemination or transmission of symbiont from host by vector
definition: The transfer of virions by means of an organism (often an insect or other animal) in order to create new infection.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044009

single-species biofilm formation
type: Class
subclass of: biofilm formation
definition: A process in which microorganisms of the same species attach to and grow on a surface such, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044010
in_subset: gosubset prok

single-species biofilm formation on inanimate substrate
type: Class
subclass of: single-species biofilm formation
subclass of: intraspecies interaction between organisms
definition: A process in which microorganisms of the same species attach to and grow on an inanimate surface such as a rock or pipe, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044011
in_subset: gosubset prok

modification by symbiont of host protein by phosphorylation
type: Class
subclass of: modification by symbiont of host protein
definition: The process in which an organism adds a phosphate group to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044031
in_subset: gosubset prok
comment: Note that this term is intended for use in annotation of symbiont gene products. For host gene products that phosphorylate host proteins, consider annotation to 'protein amino acid phosphorylation ; GO:0006468'. Consider also annotation to the molecular function term 'protein kinase activity ; GO:0004672'.

modulation by symbiont of indole acetic acid levels in host
type: Class
subclass of: modulation by symbiont of host hormone or growth regulator levels
definition: The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_broad_synonym: modulation by symbiont of auxin levels in host
has_exact_synonym: modulation by symbiont of IAA levels in host
has_obo_namespace: biological_process
id: GO:0044032
comment: Note that this term is intended for use in annotation of symbiont gene products. For host gene products that regulate indole acetic acid levels in the host, consider annotating to 'auxin homeostasis ; GO:0010252'.

multi-organism metabolic process
type: Class
subclass of: multi-organism process
definition: A metabolic process - chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances - which involves more than one organism.
imported from: go.owl
has_exact_synonym: multi-organism metabolism
has_exact_synonym: multi-organismal metabolic process
has_exact_synonym: multi-organismal metabolism
has_obo_namespace: biological_process
id: GO:0044033
in_subset: gosubset prok

multi-organism biosynthetic process
type: Class
subclass of: multi-organism metabolic process
definition: A biosynthetic process - chemical reactions and pathways resulting in the formation of substances - which involves more than one organism.
imported from: go.owl
has_exact_synonym: multi-organism biosynthesis
has_exact_synonym: multi-organismal biosynthesis
has_exact_synonym: multi-organismal biosynthetic process
has_obo_namespace: biological_process
id: GO:0044034
in_subset: gosubset prok

multi-organism catabolic process
type: Class
subclass of: multi-organism metabolic process
definition: A catabolic process - chemical reactions and pathways resulting in the breakdown of substances - which involves more than one organism.
imported from: go.owl
has_exact_synonym: multi-organism catabolism
has_exact_synonym: multi-organismal catabolic process
has_exact_synonym: multi-organismal catabolism
has_obo_namespace: biological_process
id: GO:0044035
in_subset: gosubset prok

multi-organism cell wall macromolecule metabolic process
type: Class
subclass of: multi-organism metabolic process
subclass of: multi-organism cellular process
definition: The chemical reactions and pathways involving macromolecules forming, or destined to form, part of a cell wall, involving more than one organism. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
imported from: go.owl
has_exact_synonym: multi-organism cell wall macromolecule metabolism
has_obo_namespace: biological_process
id: GO:0044037
in_subset: gosubset prok

multi-organism carbohydrate metabolic process
type: Class
subclass of: multi-organism metabolic process
definition: The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, that involve more than one organism.
imported from: go.owl
has_exact_synonym: multi-organism carbohydrate metabolism
has_narrow_synonym: main pathways of carbohydrate metabolic process
has_narrow_synonym: main pathways of carbohydrate metabolism
has_obo_namespace: biological_process
id: GO:0044040
in_subset: gosubset prok

multi-organism carbohydrate catabolic process
type: Class
subclass of: multi-organism catabolic process
subclass of: multi-organism carbohydrate metabolic process
definition: The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, involving more than one organism.
imported from: go.owl
has_exact_synonym: multi-organism carbohydrate breakdown
has_exact_synonym: multi-organism carbohydrate catabolism
has_exact_synonym: multi-organism carbohydrate degradation
has_obo_namespace: biological_process
id: GO:0044041
in_subset: gosubset prok

multi-organism glucan metabolic process
type: Class
subclass of: multi-organism carbohydrate metabolic process
definition: The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, involving more than one organism.
imported from: go.owl
has_exact_synonym: multi-organism glucan metabolism
has_obo_namespace: biological_process
id: GO:0044043
in_subset: gosubset prok

interaction with host via substance in symbiont surface
type: Class
subclass of: interaction with host
definition: An interaction with the host organism mediated by a substance on the surface of the other (symbiont) organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044044
in_subset: gosubset prok

interaction with host via substance in symbiont cell outer membrane
type: Class
subclass of: interaction with host via substance in symbiont surface
definition: An interaction with the host organism mediated by a substance in the symbiont cell outer membrane - a lipid bilayer that forms the outermost layer of the symbiont cell envelope. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044045
in_subset: gosubset prok

interaction with host via substance released outside of symbiont
type: Class
subclass of: interaction with host
definition: An interaction with the host organism mediated by a substance that is released by the other organism. This includes substances that are released via pathogen cell lysis.
imported from: go.owl
has_exact_synonym: interaction with host via substance released outside of symbiont cells
has_obo_namespace: biological_process
id: GO:0044046
in_subset: gosubset prok

interaction with host via protein secreted by type I secretion system
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type I secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044047
in_subset: gosubset prok

interaction with host via protein secreted by type V secretion system
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type V secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044048

interaction with host via protein secreted by type VI secretion system
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type VI secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044049

interaction with host via substance released by sporangium lysis
type: Class
subclass of: interaction with host via substance released outside of symbiont
definition: An interaction with the host organism mediated by a substance released via rupture of symbiont sporangia, structures producing and containing spores. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: interaction with host via substance released by sporangia lysis
has_obo_namespace: biological_process
has_related_synonym: interaction with host via substance released by lysis of symbiont sporangium
id: GO:0044050
in_subset: gosubset prok

interaction with host via substance released by symbiont cytolysis
type: Class
subclass of: interaction with host via substance released outside of symbiont
definition: An interaction with the host organism mediated by a substance released via cytolysis of symbiont cells. Cytolysis is the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: interaction with host via substance released by cytolysis of symbiont
has_obo_namespace: biological_process
id: GO:0044051
in_subset: gosubset prok

interaction with host via substance released by membrane budding
type: Class
subclass of: interaction with host via substance released outside of symbiont
definition: An interaction with the host organism mediated by a substance released via symbiont membrane budding, the evagination of a membrane resulting in formation of a vesicle.
imported from: go.owl
has_exact_synonym: interaction with host via substance released by symbiont membrane budding
has_obo_namespace: biological_process
id: GO:0044052
in_subset: gosubset prok

translocation of peptides or proteins into host cell cytoplasm
type: Class
subclass of: translocation of peptides or proteins into host
definition: The directed movement of peptides or proteins produced by a symbiont organism to a location within the host cell cytoplasm.
imported from: go.owl
has_exact_synonym: translocation of symbiont peptides or proteins into host cell cytoplasm
has_exact_synonym: transport of peptides or proteins into host cell cytoplasm
has_obo_namespace: biological_process
id: GO:0044053
in_subset: gosubset prok

rounding by symbiont of host cells
type: Class
subclass of: disruption by symbiont of host cell
definition: Any process in which an organism causes host cells to change shape and become round.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044054
in_subset: gosubset prok

modulation by symbiont of host system process
type: Class
subclass of: modification by symbiont of host morphology or physiology
definition: The alteration by a symbiont organism of the functioning of a system process in the host. A system process is a multicellular organismal process carried out by any of the organs or tissues in an organ system.
imported from: go.owl
has_exact_synonym: regulation by symbiont of host system process
has_obo_namespace: biological_process
id: GO:0044055
in_subset: gosubset prok

modulation by symbiont of host digestive system process
type: Class
subclass of: modulation by symbiont of host system process
definition: The alteration by a symbiont organism of the functioning of a digestive system process, a physical, chemical, or biochemical process carried out by the host organism to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.
imported from: go.owl
has_exact_synonym: regulation by symbiont of host digestive system process
has_obo_namespace: biological_process
id: GO:0044056

modulation by symbiont of host endocrine process
type: Class
subclass of: modulation by symbiont of host system process
definition: The alteration by a symbiont organism of the functioning of a endocrine process, any of the hormonal, neural, and secretory processes that release products into the blood or lymph, in the host organism.
imported from: go.owl
has_exact_synonym: regulation by symbiont of host endocrine process
has_obo_namespace: biological_process
id: GO:0044059
in_subset: gosubset prok

modulation by symbiont of host excretion
type: Class
subclass of: modulation by symbiont of host system process
definition: The alteration by a symbiont organism of the functioning of excretion, the elimination by the host organism of the waste products that arise as a result of metabolic activity.
imported from: go.owl
has_exact_synonym: regulation by symbiont of host excretion
has_obo_namespace: biological_process
id: GO:0044061
in_subset: gosubset prok

modulation by symbiont of host neurological system process
type: Class
subclass of: modulation by symbiont of host system process
definition: The alteration by a symbiont organism of the functioning of a host neurophysiological process, an organ system process carried out by any of the organs or tissues of neurological system.
imported from: go.owl
has_exact_synonym: regulation by symbiont of host neurological system process
has_obo_namespace: biological_process
id: GO:0044063
in_subset: gosubset prok

modulation by symbiont of host respiratory system process
type: Class
subclass of: modulation by symbiont of host system process
definition: The alteration by a symbiont organism of the functioning of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.
imported from: go.owl
has_exact_synonym: regulation by symbiont of host respiratory system process
has_obo_namespace: biological_process
id: GO:0044064
in_subset: gosubset prok

modification by symbiont of host cell nucleus
type: Class
subclass of: modification by symbiont of host cellular component
definition: The process in which a symbiont organism effects a change in the structure or function of its host cell nucleus.
imported from: go.owl
has_exact_synonym: modification by symbiont of host nucleus
has_exact_synonym: modification of host cell nucleus by symbiont
has_exact_synonym: modification of host nucleus by symbiont
has_obo_namespace: biological_process
id: GO:0044066
in_subset: gosubset prok

modification by symbiont of host intercellular junctions
type: Class
subclass of: modification by symbiont of host cellular component
definition: The process in which a symbiont organism effects a change in the structure or function of its host intercellular junction, a specialized region of connection between two cells.
imported from: go.owl
has_exact_synonym: modification of host intercellular junctions by symbiont
has_obo_namespace: biological_process
id: GO:0044067
in_subset: gosubset prok

modulation by symbiont of host cellular process
type: Class
subclass of: modification by symbiont of host morphology or physiology
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of a cellular process, any process that is carried out at the cellular level, but not necessarily restricted to a single cell, in its host organism.
imported from: go.owl
has_exact_synonym: modulation of host cellular process by symbiont
has_exact_synonym: regulation by symbiont of host cellular process
has_exact_synonym: regulation of host cellular process by symbiont
has_obo_namespace: biological_process
id: GO:0044068
in_subset: gosubset prok

modulation by symbiont of host anion transport
type: Class
subclass of: modulation by symbiont of host intracellular transport
definition: The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.
imported from: go.owl
has_exact_synonym: modification of host anion transport by symbiont
has_obo_namespace: biological_process
id: GO:0044069
in_subset: gosubset prok

modulation by symbiont of host cell cycle
type: Class
subclass of: modulation by symbiont of host cellular process
definition: The process in which a symbiont organism effects a change in its host's cell cycle through direct interactions with the host cell macromolecular machinery.
imported from: go.owl
has_exact_synonym: modification by symbiont of host cell cycle
has_exact_synonym: modulation of host cell cycle by symbiont
has_exact_synonym: regulation by symbiont of host cell cycle
has_obo_namespace: biological_process
id: GO:0044071
in_subset: gosubset prok

negative regulation by symbiont of host cell cycle
type: Class
subclass of: modulation by symbiont of host cell cycle
definition: The process in which a symbiont organism stops, prevents or reduces the rate or extent of its host's progression through its cell cycle via direct interactions with the host cell macromolecular machinery.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044072
in_subset: gosubset prok

modulation by symbiont of host translation
type: Class
subclass of: modulation by symbiont of host cellular process
definition: The process in which a symbiont organism effects a change in translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.
imported from: go.owl
has_exact_synonym: modification by symbiont of host translation
has_exact_synonym: modulation of host translation by symbiont
has_exact_synonym: regulation by symbiont of host translation
has_obo_namespace: biological_process
id: GO:0044073
in_subset: gosubset prok

negative regulation by symbiont of host translation
type: Class
subclass of: modulation by symbiont of host translation
definition: The process in which a symbiont organism stops, prevents, or reduces the frequency, rate or extent of translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.
imported from: go.owl
has_exact_synonym: negative regulation of host translation by symbiont
has_obo_namespace: biological_process
id: GO:0044074
in_subset: gosubset prok

modulation by symbiont of host vacuole organization
type: Class
subclass of: modulation by symbiont of host cellular process
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of vacuole organization in its host organism.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host vacuole organisation
has_exact_synonym: modulation of host vacuole organization by symbiont
has_exact_synonym: regulation by symbiont of host vacuole organization
has_obo_namespace: biological_process
has_related_synonym: modulation by symbiont of host vacuole biogenesis
id: GO:0044075
in_subset: gosubset prok

positive regulation by symbiont of host vacuole organization
type: Class
subclass of: modulation by symbiont of host vacuole organization
definition: The process in which a symbiont organism activates or increases the frequency, rate or extent of vacuole organization in its host organism.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of host vacuole organisation
has_exact_synonym: positive regulation of host vacuole organization by symbiont
has_obo_namespace: biological_process
has_related_synonym: positive regulation by symbiont of host vacuole biogenesis
id: GO:0044076

modulation by symbiont of host receptor-mediated endocytosis
type: Class
subclass of: modulation by symbiont of host cellular process
definition: The process in which a symbiont organism modulates the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport, in its host organism.
imported from: go.owl
has_exact_synonym: modulation of host receptor-mediated endocytosis by symbiont
has_exact_synonym: regulation by symbiont of host receptor-mediated endocytosis
has_obo_namespace: biological_process
id: GO:0044077
in_subset: gosubset prok

positive regulation by symbiont of host receptor-mediated endocytosis
type: Class
subclass of: modulation by symbiont of host receptor-mediated endocytosis
definition: Any process in which a symbiont organism activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport, in its host organism.
imported from: go.owl
has_exact_synonym: positive regulation of host receptor-mediated endocytosis by symbiont
has_obo_namespace: biological_process
id: GO:0044078
in_subset: gosubset prok

modulation by symbiont of host neurotransmitter secretion
type: Class
subclass of: modulation by symbiont of host neurological system process
subclass of: modulation by symbiont of host cellular process
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell in its host organism.
imported from: go.owl
has_exact_synonym: modification by symbiont of host neurotransmitter secretion
has_exact_synonym: modulation of host neurotransmitter secretion by symbiont
has_exact_synonym: regulation by symbiont of host neurotransmitter secretion
has_obo_namespace: biological_process
id: GO:0044079
in_subset: gosubset prok

modulation by symbiont of host cGMP-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which a symbiont organism modulates the rate, frequency or extent of cGMP-mediated signaling in its host organism. cGMP-mediated signaling is a series of molecular signals in which a cell uses cyclic GMP to convert an extracellular signal into a response.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host cGMP-mediated signal transduction pathway
has_exact_synonym: modulation by symbiont of host cGMP-mediated signaling
has_exact_synonym: modulation by symbiont of host cGMP-mediated signalling
has_exact_synonym: modulation of host cGMP-mediated signal transduction by symbiont
has_exact_synonym: regulation by symbiont of host cGMP-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0044080
in_subset: gosubset prok

modulation by symbiont of host nitric oxide-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which a symbiont organism modulates the rate, frequency or extent of nitric oxide mediated signal transduction in its host organism. Nitric oxide mediated signal transduction is a series of molecular signals mediated by the detection of nitric oxide (NO).
imported from: go.owl
has_exact_synonym: modulation by symbiont of host nitric oxide mediated signal transduction
has_exact_synonym: modulation of host nitric oxide-mediated signal transduction by symbiont
has_exact_synonym: modulation of host nitric oxide-mediated signaling by symbiont
has_exact_synonym: modulation of host nitric oxide-mediated signalling by symbiont
has_exact_synonym: regulation by symbiont of host nitric oxide-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0044081
in_subset: gosubset prok

modulation by symbiont of host small GTPase mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of small GTPase mediated signal transduction in its host organism.
imported from: go.owl
has_exact_synonym: modulation of host small GTPase mediated signal transduction by symbiont
has_exact_synonym: regulation by symbiont of host small GTPase mediated signal transduction
has_obo_namespace: biological_process
id: GO:0044082
in_subset: gosubset prok

modulation by symbiont of host Rho protein signal transduction
type: Class
subclass of: modulation by symbiont of host small GTPase mediated signal transduction
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of Rho protein signal transduction in its host organism.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host Rho protein mediated signal transduction
has_exact_synonym: modulation by symbiont of host Rho protein-mediated signal transduction
has_exact_synonym: modulation of host Rho protein signal transduction by symbiont
has_exact_synonym: modulation of host Rho protein signaling by symbiont
has_exact_synonym: modulation of host Rho protein signalling by symbiont
has_exact_synonym: regulation by symbiont of host Rho protein signal transduction
has_obo_namespace: biological_process
id: GO:0044083
in_subset: gosubset prok

growth involved in symbiotic interaction
type: Class
subclass of: multi-organism process
definition: The increase in size or mass of an organism occurring when the organism is in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T02:22:33Z
has_obo_namespace: biological_process
has_related_synonym: growth during symbiotic interaction
id: GO:0044110
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development during symbiotic interaction ; GO:0052171'. See also 'development during symbiotic interaction ; GO:0044111'.

development involved in symbiotic interaction
type: Class
subclass of: multi-organism process
definition: The progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T02:26:46Z
has_obo_namespace: biological_process
has_related_synonym: development during symbiotic interaction
id: GO:0044111
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development during symbiotic interaction ; GO:0052171'. See also 'growth during symbiotic interaction ; GO:0044110'.

growth in other organism involved in symbiotic interaction
type: Class
subclass of: growth involved in symbiotic interaction
definition: The increase in size or mass of an organism, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.
imported from: go.owl
created by: jane
creation date: 2009-07-30T02:32:14Z
has_obo_namespace: biological_process
has_related_synonym: growth in other organism during symbiotic interaction
id: GO:0044112
comment: This term partially replaces the obsolete term 'growth or development in other organism during symbiotic interaction ; GO:0051831'. See also 'development in other organism during symbiotic interaction ; GO:0044113'.

development in other organism involved in symbiotic interaction
type: Class
subclass of: development involved in symbiotic interaction
definition: The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.
imported from: go.owl
created by: jane
creation date: 2009-07-30T02:32:38Z
has_obo_namespace: biological_process
has_related_synonym: development in other organism during symbiotic interaction
id: GO:0044113
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development in other organism during symbiotic interaction ; GO:0051831'. See also 'growth in other organism during symbiotic interaction ; GO:0044112'.

development of symbiont in host
type: Class
subclass of: development of symbiont involved in interaction with host
definition: The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T03:39:25Z
has_obo_namespace: biological_process
id: GO:0044114
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host ; GO:0044412'. See also 'growth of symbiont in host ; GO:0044117'.

development of symbiont involved in interaction with host
type: Class
subclass of: development involved in symbiotic interaction
definition: The progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T03:26:36Z
has_obo_namespace: biological_process
has_related_synonym: development of symbiont during interaction with host
id: GO:0044115
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont during interaction with host ; GO:0052108'. See also 'growth of symbiont during interaction with host ; GO:0044116'.

growth of symbiont involved in interaction with host
type: Class
subclass of: growth involved in symbiotic interaction
definition: The increase in size or mass of an organism, occurring in, on or near the exterior of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T03:27:07Z
has_obo_namespace: biological_process
has_related_synonym: growth of symbiont during interaction with host
id: GO:0044116
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont during interaction with host ; GO:0052108'. See also 'development of symbiont during interaction with host ; GO:0044115'.

growth of symbiont in host
type: Class
subclass of: growth of symbiont involved in interaction with host
definition: The increase in size or mass of an organism, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T03:39:56Z
has_obo_namespace: biological_process
id: GO:0044117
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host ; GO:0044412'. See also 'development of symbiont in host ; GO:0044114'.

development of symbiont in host cell
type: Class
subclass of: development of symbiont in host
definition: The progression of the symbiont from an initial condition to a later condition, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T03:52:00Z
has_obo_namespace: biological_process
id: GO:0044118
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host cell ; GO:0075065'. See also 'growth of symbiont in host cell ; GO:0044119'.

growth of symbiont in host cell
type: Class
subclass of: growth of symbiont in host
definition: The increase in size or mass of symbiont, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T03:52:30Z
has_obo_namespace: biological_process
id: GO:0044119
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host cell ; GO:0075065'. See also 'development of symbiont in host cell ; GO:0044118'. This term refers to an increase in mass of a symbiont in a host cell; it should not be used to annotate an increase in number of symbionts, e.g. viral replication in a host cell.

development of symbiont in host organelle
type: Class
subclass of: development of symbiont in host cell
definition: The progression of the symbiont from an initial condition to a later condition, occurring in its host's organelle. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T03:59:54Z
has_obo_namespace: biological_process
id: GO:0044120
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host organelle ; GO:0075066'. See also 'growth of symbiont in host organelle ; GO:0044121'.

growth of symbiont in host organelle
type: Class
subclass of: growth of symbiont in host cell
definition: The increase in size or mass of a symbiont, occurring in its host's organelle. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T04:00:25Z
has_obo_namespace: biological_process
id: GO:0044121
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host organelle ; GO:0075066'. See also 'development of symbiont in host organelle ; GO:0044120'.

development of symbiont in host vascular tissue
type: Class
subclass of: development of symbiont in host
definition: The progression of the symbiont from an initial condition to a later condition, occurring in its host's vascular tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T04:23:43Z
has_obo_namespace: biological_process
id: GO:0044122
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host organelle ; GO:0075066'. See also 'growth of symbiont in host vascular tissue ; GO:0044123'.

growth of symbiont in host vascular tissue
type: Class
subclass of: growth of symbiont in host
definition: The increase in size or mass of symbiont, occurring in its host's vascular tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T04:24:56Z
has_obo_namespace: biological_process
id: GO:0044123
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host organelle ; GO:0075066'. See also 'development of symbiont in host vascular tissue ; GO:0044122'.

development of symbiont in host intercellular space
type: Class
subclass of: development of symbiont in host
definition: The progression of the symbiont from an initial condition to a later condition, occurring in its host's intercellular space. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T04:50:34Z
has_obo_namespace: biological_process
id: GO:0044124
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host intercellular space ; GO:0075067'. See also 'growth of symbiont in host intercellular space ; GO:0044125'.

growth of symbiont in host intercellular space
type: Class
subclass of: growth of symbiont in host
definition: The increase in size or mass of symbiont, occurring in its host's intercellular space. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-07-30T04:51:07Z
has_obo_namespace: biological_process
id: GO:0044125
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont in host intercellular space ; GO:0075067'. See also 'development of symbiont in host intercellular space ; GO:0044124'.

development of symbiont on or near host
type: Class
subclass of: development of symbiont involved in interaction with host
definition: The progression of a symbiont from an initial condition to a later condition, within the cells or tissues of its host organism.
imported from: go.owl
created by: jane
creation date: 2009-08-04T03:36:02Z
has_obo_namespace: biological_process
id: GO:0044132
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont on or near host ; GO:0044408'. See also 'growth of symbiont on or near host ; GO:0044133'.

growth of symbiont on or near host
type: Class
subclass of: growth of symbiont involved in interaction with host
definition: The increase in size or mass of a symbiont within the cells or tissues of its host organism.
imported from: go.owl
created by: jane
creation date: 2009-08-04T03:36:49Z
has_obo_namespace: biological_process
id: GO:0044133
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont on or near host ; GO:0044408'. See also 'development of symbiont on or near host ; GO:0044132'.

development of symbiont on or near host phyllosphere
type: Class
subclass of: development of symbiont on or near host
definition: The progression of the symbiont from an initial condition to a later condition, occurring on or near its host phyllosphere. The host phyllosphere is defined as total above-ground surfaces of a plant as a habitat for symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-04T04:10:58Z
has_obo_namespace: biological_process
id: GO:0044134
comment: This term partially replaces the obsolete term 'growth or development of symbiont on or near host phyllosphere ; GO:0075013'. See also 'growth of symbiont on or near host phyllosphere ; GO:0044135'.

growth of symbiont on or near host phyllosphere
type: Class
subclass of: growth of symbiont on or near host
definition: The increase in size or mass of symbiont occurring on or near its host phyllosphere. The host phyllosphere is defined as total above-ground surfaces of a plant as a habitat for symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-04T04:11:23Z
has_obo_namespace: biological_process
id: GO:0044135
comment: This term partially replaces the obsolete term 'growth or development of symbiont on or near host phyllosphere ; GO:0075013'. See also 'development of symbiont on or near host phyllosphere ; GO:0044134'.

development of symbiont on or near host rhizosphere
type: Class
subclass of: development of symbiont on or near host
definition: The progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-04T04:18:35Z
has_obo_namespace: biological_process
id: GO:0044136
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont on or near host rhizosphere ; GO:0075014'. See also 'growth of symbiont on or near host rhizosphere ; GO:0044137'.

growth of symbiont on or near host rhizosphere
type: Class
subclass of: growth of symbiont on or near host
definition: The increase in size or mass of symbiont occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-04T04:19:07Z
has_obo_namespace: biological_process
id: GO:0044137
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of symbiont on or near host rhizosphere ; GO:0075014'. See also 'development of symbiont on or near host rhizosphere ; GO:0044136'.

development of organism on or near symbiont surface
type: Class
subclass of: development on or near surface of other organism involved in symbiotic interaction
definition: The progression of an organism from an initial condition to a later condition, occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-06T03:15:52Z
has_obo_namespace: biological_process
id: GO:0044150
in_subset: gosubset prok

growth of organism on or near symbiont surface
type: Class
subclass of: growth on or near surface of other organism involved in symbiotic interaction
definition: The increase in size or mass of an organism occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-06T03:16:19Z
has_obo_namespace: biological_process
id: GO:0044151
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development of organism on or near symbiont surface ; GO:0051857'. See also 'development of organism on or near symbiont surface ; GO:0044150'.

development on or near surface of other organism involved in symbiotic interaction
type: Class
subclass of: development involved in symbiotic interaction
definition: The progression of an organism from an initial condition to a later condition, occurring on or near the exterior of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-06T03:25:28Z
has_obo_namespace: biological_process
has_related_synonym: development on or near surface of other organism during symbiotic interaction
id: GO:0044152
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development on or near surface of other organism during symbiotic interaction ; GO:0051827'. See also 'growth on or near surface of other organism during symbiotic interaction ; GO:0044153'.

growth on or near surface of other organism involved in symbiotic interaction
type: Class
subclass of: growth involved in symbiotic interaction
definition: The increase in size or mass of an organism occurring on or near the exterior of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2009-08-06T03:25:54Z
has_obo_namespace: biological_process
has_related_synonym: growth on or near surface of other organism during symbiotic interaction
id: GO:0044153
in_subset: gosubset prok
comment: This term partially replaces the obsolete term 'growth or development on or near surface of other organism during symbiotic interaction ; GO:0051827'. See also 'development on or near surface of other organism during symbiotic interaction ; GO:0044152'.

hemolysis in other organism
type: Class
subclass of: cytolysis in other organism
definition: The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another.
imported from: go.owl
created by: jane
creation date: 2009-09-04T03:36:00Z
has_exact_synonym: hemolysis of RBCs in other organism
has_exact_synonym: hemolysis of cells in other organism
has_exact_synonym: hemolysis of erythrocytes in other organism
has_exact_synonym: hemolysis of red blood cells in other organism
has_obo_namespace: biological_process
id: GO:0044179
in_subset: gosubset prok

cell wall disruption in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: A process carried out by an organism that results in the breakdown of the cell wall of a second organism.
imported from: go.owl
created by: jane
creation date: 2010-01-14T02:01:48Z
has_obo_namespace: biological_process
id: GO:0044278

envenomation resulting in hemorrhagic damage to other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with vascular damage and hemorrhage in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2011-10-26T04:24:59Z
has_obo_namespace: biological_process
id: GO:0044358

modulation of molecular function in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: The process in which an organism effects a change in the function of proteins in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T01:28:16Z
has_obo_namespace: biological_process
id: GO:0044359

modulation of voltage-gated potassium channel activity in other organism
type: Class
subclass of: modulation of potassium channel activity in other organism
definition: Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated potassium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T02:09:28Z
has_obo_namespace: biological_process
id: GO:0044360

negative regulation of voltage-gated potassium channel activity in other organism
type: Class
subclass of: modulation of voltage-gated potassium channel activity in other organism
subclass of: negative regulation of molecular function in other organism
definition: Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated potassium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T02:11:52Z
has_obo_namespace: biological_process
id: GO:0044361

negative regulation of molecular function in other organism
type: Class
subclass of: modulation of molecular function in other organism
definition: Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the function of proteins in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T02:12:49Z
has_obo_namespace: biological_process
id: GO:0044362

modulation of potassium channel activity in other organism
type: Class
subclass of: modulation of ion channel activity in other organism
definition: Any process in which an organism effects a change in the frequency, rate or extent of the activity of a potassium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T02:19:32Z
has_obo_namespace: biological_process
id: GO:0044363

disruption of cells of other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: A process in which an organism has a negative effect on the functioning of the second organism's cells.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T02:27:48Z
has_obo_namespace: biological_process
id: GO:0044364

envenomation resulting in modulation of platelet aggregation in other organism
type: Class
subclass of: envenomation resulting in modulation of blood coagulation in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change to the frequency, rate or extent of platelet aggregation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T02:36:43Z
has_exact_synonym: envenomation resulting in regulation of platelet aggregation in other organism
has_obo_namespace: biological_process
id: GO:0044365

feeding on or from other organism
type: Class
subclass of: multi-organism behavior
definition: The behaviour of consuming the whole or part of another organism for the purposes of nutrition.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T03:30:30Z
has_obo_namespace: biological_process
id: GO:0044366

feeding from tissue of other organism
type: Class
subclass of: feeding on or from other organism
definition: The behaviour of consuming part of another organism for the purposes of nutrition via a particular tissue e.g. vascular tissue.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T03:31:23Z
has_obo_namespace: biological_process
id: GO:0044367

feeding from vascular tissue of another organism
type: Class
subclass of: feeding from tissue of other organism
definition: The behaviour of consuming part of another organism for the purposes of nutrition via a vascular tissue.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T03:52:32Z
has_obo_namespace: biological_process
id: GO:0044368

feeding on blood of other organism
type: Class
subclass of: feeding from vascular tissue of another organism
definition: The behaviour of feeding on the blood of another organism via specialized mouth parts and chemical agents used to penetrate vascular structures in the skin of hosts.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T03:53:33Z
has_exact_synonym: hematophagy
has_exact_synonym: phlebotomy
has_exact_synonym: taking of blood meal
has_obo_namespace: biological_process
id: GO:0044369

injection of substance into other organism during feeding on blood of other organism
type: Class
subclass of: injection of substance in to other organism
definition: The process of forcing a substance into the bloodstream of another organism, whilst feeding on blood of other organism. The substance may facilitate the feeding process, e.g. by preventing the blood from clotting.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T03:57:28Z
has_obo_namespace: biological_process
id: GO:0044370

feeding from phloem of other organism
type: Class
subclass of: feeding from vascular tissue of another organism
definition: The behaviour of consuming phloem sap, usually by penetration of the phloem wall, for the purposes of nutrition.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T04:06:52Z
has_exact_synonym: feeding from plant phloem
has_exact_synonym: feeding on plant sap
has_obo_namespace: biological_process
id: GO:0044371

feeding from xylem of other organism
type: Class
subclass of: feeding from vascular tissue of another organism
definition: The behaviour of consuming xylem exudate from plant xylem tissue for the purposes of nutrition.
imported from: go.owl
created by: janelomax
creation date: 2011-10-27T04:42:45Z
has_exact_synonym: feeding from plant xylem
has_exact_synonym: feeding from xylem of plant
has_exact_synonym: feeding on xylem exudate
has_obo_namespace: biological_process
id: GO:0044372

envenomation resulting in induction of edema in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the swelling of soft tissues of the bitten organism as a result of excess water accumulation.
imported from: go.owl
created by: janelomax
creation date: 2011-12-21T03:57:27Z
has_exact_synonym: envenomation resulting in induction of oedema in other organism
has_obo_namespace: biological_process
id: GO:0044398

multi-species biofilm formation
type: Class
subclass of: biofilm formation
subclass of: symbiosis, encompassing mutualism through parasitism
definition: A process in which microorganisms of different species attach to and grow on a surface and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044399
in_subset: gosubset prok

multi-species biofilm formation on inanimate substrate
type: Class
subclass of: multi-species biofilm formation
definition: A process in which microorganisms of different species attach to and grow on an inanimate surface such as a rock or pipe and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044400
in_subset: gosubset prok

multi-species biofilm formation in or on host organism
type: Class
subclass of: multi-species biofilm formation
subclass of: adhesion to host
definition: A process in which microorganisms of different species attach to and grow in or on a surface in a host species, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044401
in_subset: gosubset prok

competition with other organism
type: Class
subclass of: interspecies interaction between organisms
definition: Any process in which an organism within a multispecies community gains an advantage in growth or survival over another organism of a different species in that community.
imported from: go.owl
has_broad_synonym: interspecies competition
has_exact_synonym: competition with another organism
has_obo_namespace: biological_process
id: GO:0044402
in_subset: gosubset prok

symbiosis, encompassing mutualism through parasitism
type: Class
subclass of: interspecies interaction between organisms
definition: An interaction between two organisms living together in more or less intimate association. The term host is usually used for the larger (macro) of the two members of a symbiosis. The smaller (micro) member is called the symbiont organism. Microscopic symbionts are often referred to as endosymbionts. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs.
imported from: go.owl
has_alternative_id: GO:0043298
has_alternative_id: GO:0044404
has_exact_synonym: symbiosis
has_exact_synonym: symbiotic interaction
has_exact_synonym: symbiotic interaction between organisms
has_exact_synonym: symbiotic interaction between species
has_obo_namespace: biological_process
has_related_synonym: host-pathogen interaction
has_related_synonym: symbiotic interaction between host and organism
has_related_synonym: symbiotic interaction with other non-host organism
id: GO:0044403
in_subset: goslim generic
in_subset: goslim metagenomics
in_subset: gosubset prok
comment: Note that this term encompasses all symbiotic relationships between species along a continuum from mutualism through to parasitism, as outlined in the definition.

recognition of host
type: Class
subclass of: recognition of other organism involved in symbiotic interaction
subclass of: response to host
definition: The set of specific processes that allow an organism to detect the presence of its host via physical or chemical signals. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: detection of host
has_obo_namespace: biological_process
id: GO:0044405
in_subset: gosubset prok

adhesion to host
type: Class
subclass of: interaction with host
subclass of: adhesion to other organism involved in symbiotic interaction
definition: The attachment of an organism to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: host adhesion
has_obo_namespace: biological_process
id: GO:0044406
in_subset: gosubset prok

single-species biofilm formation in or on host organism
type: Class
subclass of: single-species biofilm formation
subclass of: adhesion to host
definition: A process in which microorganisms of the same species attach to and grow in or on a surface in a host species, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044407
in_subset: gosubset prok

entry into host
type: Class
subclass of: movement in host environment
definition: Penetration by an organism into the body, tissues, or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: host invasion
has_exact_synonym: invasion into host
has_exact_synonym: invasion of host
has_obo_namespace: biological_process
has_related_synonym: invasive growth
id: GO:0044409
in_subset: gosubset prok

entry into host through natural portals
type: Class
subclass of: entry into host
definition: Penetration by an organism into its host organism via naturally occurring openings in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044410
in_subset: gosubset prok

entry into host through host barriers
type: Class
subclass of: entry into host
definition: Penetration by an organism into its host organism via active breaching of the physical barriers of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044411
in_subset: gosubset prok

avoidance of host defenses
type: Class
subclass of: avoidance of defenses of other organism involved in symbiotic interaction
subclass of: response to host defenses
definition: Any process, either constitutive or induced, by which an organism evades, suppresses or tolerates the effects of its host organism's defense(s). Host defenses may be induced by the presence of the organism or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: avoidance of host defences
has_obo_namespace: biological_process
id: GO:0044413
in_subset: gosubset prok

suppression of host defenses
type: Class
subclass of: avoidance of host defenses
subclass of: suppression of defenses of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host defense(s) by active mechanisms that normally result in the shutting down of a host pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of host defenses
has_obo_namespace: biological_process
id: GO:0044414
in_subset: gosubset prok

evasion or tolerance of host defenses
type: Class
subclass of: avoidance of host defenses
subclass of: evasion or tolerance of defenses of other organism involved in symbiotic interaction
definition: Any process, either active or passive, by which an organism avoids or tolerates the effects of its host organism's defense(s). Host defenses may be induced by the presence of the organism or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0044415
in_subset: gosubset prok

induction by symbiont of host defense response
type: Class
subclass of: induction by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
definition: The activation by an organism of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation of host defense response
has_obo_namespace: biological_process
id: GO:0044416
in_subset: gosubset prok

translocation of molecules into host
type: Class
subclass of: interaction with host
subclass of: translocation of molecules into other organism involved in symbiotic interaction
definition: The directed movement of a molecule(s) produced by an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: transport of molecules into host
has_obo_namespace: biological_process
id: GO:0044417
in_subset: gosubset prok

translocation of DNA into host
type: Class
subclass of: translocation of molecules into host
subclass of: translocation of DNA into other organism involved in symbiotic interaction
definition: The directed movement of DNA from an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: transport of DNA into host
has_obo_namespace: biological_process
id: GO:0044418

interspecies interaction between organisms
type: Class
subclass of: multi-organism process
definition: Any process in which an organism has an effect on an organism of a different species.
imported from: go.owl
has_exact_synonym: interaction with another species
has_exact_synonym: interspecies interaction
has_exact_synonym: interspecies interaction with other organisms
has_obo_namespace: biological_process
id: GO:0044419
in_subset: goslim candida
in_subset: goslim pir
in_subset: gosubset prok

modulation of sensory perception of pain in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: A process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-12T03:14:19Z
has_exact_synonym: regulation of sensory perception of pain in another organism
has_obo_namespace: biological_process
id: GO:0044465

envenomation resulting in modulation of blood coagulation in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the frequency, rate or extent of blood coagulation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T01:24:10Z
has_exact_synonym: envenomation resulting in regulation of blood coagulation in other organism
has_obo_namespace: biological_process
id: GO:0044468

envenomation resulting in positive regulation of blood coagulation in other organism
type: Class
subclass of: envenomation resulting in modulation of blood coagulation in other organism
subclass of: envenomation resulting in impairment of hemostasis in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation, maintenance or an increase in the frequency, rate or extent of blood coagulation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T01:29:09Z
has_obo_namespace: biological_process
id: GO:0044469

envenomation resulting in negative regulation of blood coagulation in other organism
type: Class
subclass of: envenomation resulting in modulation of blood coagulation in other organism
subclass of: envenomation resulting in impairment of hemostasis in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of blood coagulation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T01:32:48Z
has_obo_namespace: biological_process
id: GO:0044470

envenomation resulting in pore formation in membrane of other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the aggregation, arrangement and bonding together of a set of components to form a pore complex in a membrane of the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T01:39:47Z
has_obo_namespace: biological_process
id: GO:0044471

envenomation resulting in modulation of calcium channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of ion channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a calcium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:17:25Z
has_obo_namespace: biological_process
id: GO:0044472

envenomation resulting in negative regulation of calcium channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of calcium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a calcium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:19:46Z
has_obo_namespace: biological_process
id: GO:0044473

envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism
type: Class
subclass of: envenomation resulting in negative regulation of calcium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated calcium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:25:04Z
has_obo_namespace: biological_process
id: GO:0044474

envenomation resulting in negative regulation of high voltage-gated calcium channel activity in other organism
type: Class
subclass of: envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a high voltage-gated calcium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:28:11Z
has_obo_namespace: biological_process
id: GO:0044475

envenomation resulting in negative regulation of low voltage-gated calcium channel activity in other organism
type: Class
subclass of: envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a low voltage-gated calcium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:28:42Z
has_obo_namespace: biological_process
id: GO:0044476

envenomation resulting in negative regulation of platelet aggregation in other organism
type: Class
subclass of: envenomation resulting in modulation of platelet aggregation in other organism
subclass of: envenomation resulting in negative regulation of blood coagulation in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of platelet aggregation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:36:44Z
has_obo_namespace: biological_process
id: GO:0044477

envenomation resulting in positive regulation of platelet aggregation in other organism
type: Class
subclass of: envenomation resulting in modulation of platelet aggregation in other organism
subclass of: envenomation resulting in positive regulation of blood coagulation in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation, maintenance or an increase in the frequency, rate or extent of platelet aggregation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:39:45Z
has_obo_namespace: biological_process
id: GO:0044478

envenomation resulting in modulation of mast cell degranulation in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of blood mast cell degranulation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:51:51Z
has_obo_namespace: biological_process
id: GO:0044479

envenomation resulting in positive regulation of mast cell degranulation in other organism
type: Class
subclass of: envenomation resulting in modulation of mast cell degranulation in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of blood mast cell degranulation in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T02:54:37Z
has_obo_namespace: biological_process
id: GO:0044480

envenomation resulting in proteolysis in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant hydrolysis of proteins in of the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T03:01:16Z
has_obo_namespace: biological_process
id: GO:0044481

envenomation resulting in blood vessel extracellular matrix damage, causing hemorrhagic damage in other organism
type: Class
subclass of: envenomation resulting in hemorrhagic damage to other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism which causes damage to the extracellular matrix of the blood vessels of the bitten organism, ultimately resulting in hemorrhage in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T03:12:04Z
has_exact_synonym: envenomation resulting in blood vessel ECM, causing hemorrhagic damage in other organism
has_obo_namespace: biological_process
id: GO:0044482

envenomation resulting in impairment of hemostasis in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the inhibition of the process of hemostasis - the stopping of bleeding or the arrest of the circulation to an organ or part - in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-19T03:15:56Z
has_exact_synonym: envenomation resulting in negative regulation of hemostasis in other organism
has_exact_synonym: envenomation, impairing hemostasis in other organism
has_obo_namespace: biological_process
id: GO:0044483

envenomation resulting in fibrinolysis in other organism
type: Class
subclass of: envenomation resulting in impairment of hemostasis in other organism
definition: The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with fibrinolysis, a process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, in the bloodstream of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-26T03:26:33Z
has_obo_namespace: biological_process
id: GO:0044484

envenomation resulting in fibrinogenolysis in other organism
type: Class
subclass of: envenomation resulting in depletion of circulating fibrinogen in other organism
definition: The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with fibrinogenolysis, a process that degrades fibrinogen at a variety of Arg-Lys bonds, thus impairing fibrinogen clotting in the bloodstream of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-26T03:41:01Z
has_obo_namespace: biological_process
id: GO:0044485

modulation of transmission of nerve impulse in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: The process in which an organism effects a change in the transmission of a nerve impulse in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-26T04:03:31Z
has_exact_synonym: regulation of transmission of nerve impulse in other organism
has_obo_namespace: biological_process
id: GO:0044486

envenomation resulting in modulation of transmission of nerve impulse in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the transmission of nerve impulses in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-01-26T05:01:54Z
has_obo_namespace: biological_process
id: GO:0044487

modulation of voltage-gated sodium channel activity in other organism
type: Class
subclass of: modulation of ion channel activity in other organism
definition: Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T11:48:25Z
has_obo_namespace: biological_process
id: GO:0044488

negative regulation of voltage-gated sodium channel activity in other organism
type: Class
subclass of: negative regulation of molecular function in other organism
subclass of: modulation of voltage-gated sodium channel activity in other organism
definition: Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T12:21:02Z
has_obo_namespace: biological_process
id: GO:0044489

positive regulation of voltage-gated sodium channel activity in other organism
type: Class
subclass of: modulation of voltage-gated sodium channel activity in other organism
subclass of: positive regulation of molecular function in other organism
definition: Any process that activates or increases the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T12:21:26Z
has_obo_namespace: biological_process
id: GO:0044490

positive regulation of molecular function in other organism
type: Class
subclass of: modulation of molecular function in other organism
definition: Any process that activates or increases the frequency, rate or extent of the function of proteins in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T12:21:51Z
has_obo_namespace: biological_process
id: GO:0044491

envenomation resulting in modulation of voltage-gated sodium channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of ion channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a voltage-gated sodium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T01:23:04Z
has_obo_namespace: biological_process
id: GO:0044492

envenomation resulting in negative regulation of voltage-gated sodium channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of voltage-gated sodium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated sodium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T01:26:59Z
has_obo_namespace: biological_process
id: GO:0044493

envenomation resulting in positive regulation of voltage-gated sodium channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of voltage-gated sodium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation or increase in the activity of the activity of a voltage-gated sodium channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T01:29:25Z
has_obo_namespace: biological_process
id: GO:0044494

envenomation resulting in modulation of blood pressure in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the force with which blood travels through the circulatory system of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T02:21:27Z
has_exact_synonym: envenomation resulting in regulation of blood pressure in other organism
has_obo_namespace: biological_process
id: GO:0044498

envenomation resulting in positive regulation of blood pressure in other organism
type: Class
subclass of: envenomation resulting in modulation of blood pressure in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant increase of the force with which blood travels through the circulatory system of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T02:39:06Z
has_obo_namespace: biological_process
id: GO:0044499

envenomation resulting in negative regulation of blood pressure in other organism
type: Class
subclass of: envenomation resulting in modulation of blood pressure in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant decrease of the force with which blood travels through the circulatory system of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-01T02:40:50Z
has_exact_synonym: hypotensive activity in other organism
has_obo_namespace: biological_process
id: GO:0044500

modulation of signal transduction in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T03:48:19Z
has_obo_namespace: biological_process
id: GO:0044501

positive regulation of signal transduction in other organism
type: Class
subclass of: modulation of signal transduction in other organism
definition: A process in which an organism activates, maintains or increases the frequency, rate or extent of a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T04:00:28Z
has_obo_namespace: biological_process
id: GO:0044502

modulation of G-protein coupled receptor activity in other organism
type: Class
subclass of: modulation of receptor activity in other organism
definition: The process in which an organism effects a change in the activity of a G-protein coupled receptor in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T04:20:07Z
has_obo_namespace: biological_process
id: GO:0044503

modulation of receptor activity in other organism
type: Class
subclass of: modulation of molecular function in other organism
definition: The process in which an organism effects a change in the activity of a receptor in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T04:21:41Z
has_obo_namespace: biological_process
id: GO:0044504

positive regulation of G-protein coupled receptor activity in other organism
type: Class
subclass of: modulation of G-protein coupled receptor activity in other organism
subclass of: positive regulation of receptor activity in other organism
definition: A process that activates or increases the frequency, rate or extent of the activity of a G-protein coupled receptor in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T04:24:17Z
has_exact_synonym: regulation of G-protein coupled receptor activity in other organism
has_obo_namespace: biological_process
id: GO:0044505

modulation of glucagon-like peptide receptor 1 activity in other organism
type: Class
subclass of: modulation of receptor activity in other organism
definition: The process in which an organism effects a change in the activity of a glucagon-like peptide receptor 1 in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T04:29:14Z
has_exact_synonym: regulation of glucagon-like peptide receptor activity in other organism
has_obo_namespace: biological_process
id: GO:0044506

positive regulation of receptor activity in other organism
type: Class
subclass of: positive regulation of molecular function in other organism
subclass of: modulation of receptor activity in other organism
definition: A process that activates or increases the frequency, rate or extent of the activity of a receptor in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T04:31:52Z
has_obo_namespace: biological_process
id: GO:0044507

envenomation resulting in modulation of signal transduction in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of signal transduction in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T04:58:10Z
has_obo_namespace: biological_process
id: GO:0044509

envenomation resulting in positive regulation of signal transduction in other organism
type: Class
subclass of: envenomation resulting in modulation of signal transduction in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-23T05:03:22Z
has_obo_namespace: biological_process
id: GO:0044510

envenomation resulting in modulation of receptor activity in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of receptor activity in of the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T10:12:24Z
has_obo_namespace: biological_process
id: GO:0044511

envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in other organism
type: Class
subclass of: envenomation resulting in modulation of receptor activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of glucagon-like peptide receptor 1 activity in of the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T10:20:19Z
has_obo_namespace: biological_process
id: GO:0044512

envenomation resulting in modulation of G-protein coupled receptor activity in other organism
type: Class
subclass of: envenomation resulting in modulation of receptor activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of G-protein coupled receptor activity in of the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:02:17Z
has_obo_namespace: biological_process
id: GO:0044513

envenomation resulting in positive regulation of G-protein coupled receptor activity in other organism
type: Class
subclass of: envenomation resulting in modulation of G-protein coupled receptor activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of G-protein coupled receptor activity in of the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:06:15Z
has_obo_namespace: biological_process
id: GO:0044514

envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in other organism
type: Class
subclass of: envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of glucagon-like peptide receptor 1 activity in of the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:08:08Z
has_obo_namespace: biological_process
id: GO:0044515

positive regulation of glucagon-like peptide receptor 1 activity in other organism
type: Class
subclass of: modulation of glucagon-like peptide receptor 1 activity in other organism
subclass of: positive regulation of receptor activity in other organism
definition: A process that activates or increases the frequency, rate or extent of the activity of a glucagon-like peptide receptor 1 in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:09:44Z
has_obo_namespace: biological_process
id: GO:0044516

modulation of vasoactive intestinal polypeptide receptor activity in other organism
type: Class
subclass of: modulation of receptor activity in other organism
definition: The process in which an organism effects a change in the activity of a vasoactive intestinal polypeptide receptor in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:48:32Z
has_exact_synonym: modulation of VIP receptor activity in other organism
has_exact_synonym: regulation of vasoactive intestinal polypeptide receptor activity in other organism
has_obo_namespace: biological_process
id: GO:0044517

positive regulation of vasoactive intestinal polypeptide receptor activity in other organism
type: Class
subclass of: positive regulation of receptor activity in other organism
subclass of: modulation of vasoactive intestinal polypeptide receptor activity in other organism
definition: A process that activates or increases the frequency, rate or extent of the activity of a vasoactive intestinal polypeptide receptor in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:50:34Z
has_exact_synonym: positive regulation of VIP receptor activity in other organism
has_obo_namespace: biological_process
id: GO:0044518

envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in other organism
type: Class
subclass of: envenomation resulting in modulation of receptor activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:53:33Z
has_exact_synonym: envenomation resulting in modulation of VIP receptor activity in other organism
has_exact_synonym: envenomation resulting in regulation of VIP receptor activity in other organism
has_exact_synonym: envenomation resulting in regulation of vasoactive intestinal polypeptide receptor activity in other organism
has_obo_namespace: biological_process
id: GO:0044519

envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism
type: Class
subclass of: envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-26T11:55:46Z
has_exact_synonym: envenomation resulting in positive regulation of VIP receptor activity in other organism
has_obo_namespace: biological_process
id: GO:0044520

envenomation resulting in muscle damage in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant muscle damage in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-27T12:31:08Z
has_obo_namespace: biological_process
id: GO:0044521

envenomation resulting in myocyte killing in other organism
type: Class
subclass of: envenomation resulting in muscle damage in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, killing heart myocytes and ultimately resulting in muscle damage in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-27T12:33:57Z
has_exact_synonym: envenomation resulting in myocyte killing causing muscle damage in other organism
has_obo_namespace: biological_process
id: GO:0044522

envenomation resulting in damage of muscle extracellular matrix in other organism
type: Class
subclass of: envenomation resulting in muscle damage in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, damaging the extracellular matrix of muscle cells and ultimately resulting in muscle necrosis in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-02-27T12:40:32Z
has_exact_synonym: envenomation resulting in damage of muscle extracellular matrix causing muscle necrosis in other organism
has_obo_namespace: biological_process
id: GO:0044523

modulation of programmed cell death in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: A process in which an organism modulates the frequency, rate or extent of programmed cell death in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-20T04:48:41Z
has_obo_namespace: biological_process
id: GO:0044531

modulation of apoptotic process in other organism
type: Class
subclass of: modulation of programmed cell death in other organism
definition: A process in which an organism modulates the frequency, rate or extent of apoptosis in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-21T11:17:18Z
has_exact_synonym: regulation of apoptotic process in other organism
has_obo_namespace: biological_process
id: GO:0044532

positive regulation of apoptotic process in other organism
type: Class
subclass of: modulation of apoptotic process in other organism
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death by apoptosis in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-21T11:25:24Z
has_obo_namespace: biological_process
id: GO:0044533
in_subset: gosubset prok

envenomation resulting in modulation of apoptotic process in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of apoptosis in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-21T11:39:44Z
has_obo_namespace: biological_process
id: GO:0044534

envenomation resulting in depletion of circulating fibrinogen in other organism
type: Class
subclass of: envenomation resulting in impairment of hemostasis in other organism
definition: The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with a reduction in the quantity of fibrinogen found in the bloodstream of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-21T02:56:49Z
has_exact_synonym: envenomation resulting in negative regulation of circulating fibrinogen in other organism
has_obo_namespace: biological_process
id: GO:0044536

zymogen activation in other organism
type: Class
subclass of: multi-organism metabolic process
definition: The chemical reactions and pathways performed by an organism resulting in the proteolytic processing of an inactive enzyme to an active form in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-22T11:39:41Z
has_obo_namespace: biological_process
id: GO:0044541

plasminogen activation in other organism
type: Class
subclass of: zymogen activation in other organism
definition: The chemical reactions and pathways performed by an organism resulting in the processing of inactive plasminogen to active plasmin in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-22T11:40:03Z
has_obo_namespace: biological_process
id: GO:0044542

envenomation resulting in zymogen activation in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the proteolytic processing of an inactive enzyme to an active form.
imported from: go.owl
created by: janelomax
creation date: 2012-03-22T11:52:56Z
has_obo_namespace: biological_process
id: GO:0044543

envenomation resulting in plasminogen activation in other organism
type: Class
subclass of: envenomation resulting in fibrinolysis in other organism
definition: The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the activation of plasminogen into plasmin in the bitten organism. This process includes cleavage at an internal Arg-Val site to form an N-terminal A-chain and C-terminal B-chain held together by a disulfide bond, and can include further proteolytic cleavage events to remove the preactivation peptide.
imported from: go.owl
created by: janelomax
creation date: 2012-03-22T11:54:49Z
has_obo_namespace: biological_process
id: GO:0044544

envenomation resulting in modulation of vasodilation in other organism
type: Class
subclass of: envenomation resulting in negative regulation of blood pressure in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant modulation of vasodilation of blood vessels, usually causing a reduction in blood pressure, in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-29T02:07:45Z
has_exact_synonym: envenomation resulting in regulation of vasodilation in other organism
has_obo_namespace: biological_process
id: GO:0044551

modulation of vasodilation in other organism
type: Class
subclass of: modulation of biological quality in other organism
definition: A process by which an organism causes vasodilation of blood vessels, usually causing a reduction in blood pressure, in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-29T02:14:42Z
has_exact_synonym: regulation of vasodilation in other organism
has_obo_namespace: biological_process
id: GO:0044552

modulation of biological quality in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: Any process that modulates the frequency, rate or extent of a biological quality in another organism. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc.
imported from: go.owl
created by: janelomax
creation date: 2012-03-29T02:35:03Z
has_exact_synonym: regulation of biological quality in other organism
has_obo_namespace: biological_process
id: GO:0044553

modulation of heart rate in other organism
type: Class
subclass of: modulation of biological quality in other organism
definition: Any process that modulates the frequency or rate of heart contraction of another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-29T02:59:43Z
has_exact_synonym: regulation of heart rate in other organism
has_obo_namespace: biological_process
id: GO:0044554

negative regulation of heart rate in other organism
type: Class
subclass of: modulation of heart rate in other organism
definition: Any process that stops, prevents or reduces the frequency of heart contraction of another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-29T03:01:20Z
has_obo_namespace: biological_process
id: GO:0044555

envenomation resulting in negative regulation of heart rate of other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the negative regulation of the heart rate of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-03-29T03:04:52Z
has_obo_namespace: biological_process
id: GO:0044556

envenomation resulting in modulation of voltage-gated potassium channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of ion channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a voltage-gated potassium channel in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-04-05T03:35:20Z
has_obo_namespace: biological_process
id: GO:0044559

envenomation resulting in modulation of ion channel activity in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of an ion channel in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-04-05T03:46:35Z
has_exact_synonym: envenomation resulting in regulation of ion channel activity in other organism
has_obo_namespace: biological_process
id: GO:0044560

modulation of ion channel activity in other organism
type: Class
subclass of: modulation of molecular function in other organism
definition: Any process in which an organism effects a change in the frequency, rate or extent of the activity of an ion channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-04-05T03:48:28Z
has_exact_synonym: regulation of ion channel activity in other organism
has_obo_namespace: biological_process
id: GO:0044561

envenomation resulting in negative regulation of voltage-gated potassium channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of voltage-gated potassium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant negative regulation of the activity of a voltage-gated potassium channel in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-04-05T04:01:49Z
has_obo_namespace: biological_process
id: GO:0044562

envenomation resulting in slowing of activation kinetics of voltage-gated potassium channel in other organism
type: Class
subclass of: envenomation resulting in negative regulation of voltage-gated potassium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant slowing of the activation kinetics of the activity of a voltage-gated potassium channel in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-04-05T04:06:29Z
has_exact_synonym: voltage-dependence of activation shift (to the left)
has_obo_namespace: biological_process
id: GO:0044563

envenomation resulting in occlusion of the pore of voltage-gated potassium channel in other organism
type: Class
subclass of: envenomation resulting in negative regulation of voltage-gated potassium channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant blocking of a voltage-gated potassium channel, inhibiting the pore's activity, in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-04-05T04:14:24Z
has_obo_namespace: biological_process
id: GO:0044564

disruption by symbiont of host endothelial cells
type: Class
subclass of: disruption by symbiont of host cell
definition: Any process in which an organism has a negative effect on the functioning of the host's endothelial cells.
imported from: go.owl
created by: janelomax
creation date: 2012-05-30T02:24:50Z
has_obo_namespace: biological_process
id: GO:0044607

modulation of relaxation of muscle in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: The process in which an organism effects a change in the relaxation of muscle in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T01:54:12Z
has_exact_synonym: regulation of relaxation of muscle in other organism
has_obo_namespace: biological_process
id: GO:0044616

modulation of relaxation of smooth muscle in other organism
type: Class
subclass of: modulation of relaxation of muscle in other organism
definition: The process in which an organism effects a change in the relaxation of smooth muscle in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T01:55:37Z
has_exact_synonym: regulation of relaxation of smooth muscle in other organism
has_obo_namespace: biological_process
id: GO:0044617

modulation of relaxation of uterine smooth muscle in other organism
type: Class
subclass of: modulation of relaxation of smooth muscle in other organism
definition: The process in which an organism effects a change in the relaxation of smooth muscle in the uterus of a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T01:56:04Z
has_exact_synonym: regulation of relaxation of uterine smooth muscle in other organism
has_obo_namespace: biological_process
id: GO:0044618

positive regulation of relaxation of uterine smooth muscle in other organism
type: Class
subclass of: modulation of relaxation of uterine smooth muscle in other organism
definition: The process in which an organism effects a change in the relaxation of smooth muscle in the uterus of a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T02:51:26Z
has_obo_namespace: biological_process
id: GO:0044619

modulation of cell migration in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: The process in which an organism effects a change in the process of cell migration in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T04:40:13Z
has_exact_synonym: regulation of cell migration in other organism
has_obo_namespace: biological_process
id: GO:0044621

negative regulation of cell migration in other organism
type: Class
subclass of: modulation of cell migration in other organism
definition: Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T04:42:14Z
has_obo_namespace: biological_process
id: GO:0044622

positive regulation of cell migration in other organism
type: Class
subclass of: modulation of cell migration in other organism
definition: Any process that activates or increases the frequency, rate or extent of cell migration in a second organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T04:44:59Z
has_obo_namespace: biological_process
id: GO:0044623

envenomation resulting in modulation of cell migration in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of cell migration in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T05:03:56Z
has_exact_synonym: envenomation resulting in regulation of cell migration in other organism
has_obo_namespace: biological_process
id: GO:0044624

envenomation resulting in negative regulation of cell migration in other organism
type: Class
subclass of: envenomation resulting in modulation of cell migration in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the negative regulation of cell migration in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T05:07:16Z
has_obo_namespace: biological_process
id: GO:0044625

envenomation resulting in positive regulation of cell migration in other organism
type: Class
subclass of: envenomation resulting in modulation of cell migration in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the positive regulation of cell migration in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-04T05:08:21Z
has_obo_namespace: biological_process
id: GO:0044626

modulation of complement activation, classical pathway in other organism
type: Class
subclass of: modulation of complement activation in other organism
definition: A process that modulates the frequency, rate or extent of the classical pathway of complement activation, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T12:55:53Z
has_exact_synonym: regulation of complement activation, classical pathway in other organism
has_obo_namespace: biological_process
id: GO:0044627

positive regulation of complement activation, classical pathway in other organism
type: Class
subclass of: modulation of complement activation, classical pathway in other organism
definition: Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T01:00:10Z
has_obo_namespace: biological_process
id: GO:0044628

negative regulation of complement activation, classical pathway in other organism
type: Class
subclass of: modulation of complement activation, classical pathway in other organism
definition: Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the classical pathway, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T01:03:25Z
has_obo_namespace: biological_process
id: GO:0044629

modulation of complement activation, lectin pathway in other organism
type: Class
subclass of: modulation of complement activation in other organism
definition: A process that modulates the frequency, rate or extent of the lectin pathway of complement activation, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T01:10:31Z
has_exact_synonym: regulation of complement activation, lectin pathway in other organism
has_obo_namespace: biological_process
id: GO:0044630

positive regulation of complement activation, lectin pathway in other organism
type: Class
subclass of: modulation of complement activation, lectin pathway in other organism
definition: Any process that activates or increases the frequency, rate or extent of complement activation by the lectin pathway, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T01:17:33Z
has_obo_namespace: biological_process
id: GO:0044631

negative regulation of complement activation, lectin pathway in other organism
type: Class
subclass of: modulation of complement activation, lectin pathway in other organism
definition: Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T01:18:43Z
has_obo_namespace: biological_process
id: GO:0044632

modulation of complement activation, alternative pathway in other organism
type: Class
subclass of: modulation of complement activation in other organism
definition: A process that modulates the frequency, rate or extent of complement activation, via the alternative pathway, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:24:08Z
has_obo_namespace: biological_process
has_related_synonym: regulation of complement activation, alternative pathway in other organism
id: GO:0044633

negative regulation of complement activation, alternative pathway in other organism
type: Class
subclass of: modulation of complement activation, alternative pathway in other organism
definition: Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the alternative pathway, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:32:55Z
has_obo_namespace: biological_process
id: GO:0044634

positive regulation of complement activation, alternative pathway in other organism
type: Class
subclass of: modulation of complement activation, alternative pathway in other organism
definition: Any process that activates or increases the frequency, rate or extent of complement activation by the alternative pathway, in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:36:11Z
has_obo_namespace: biological_process
id: GO:0044635

envenomation resulting in modulation of complement activation, classical pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the regulation of complement activation via the classical pathway of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:40:57Z
has_obo_namespace: biological_process
id: GO:0044636

envenomation resulting in negative regulation of complement activation, classical pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation, classical pathway in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the negative regulation of complement activation via the classical pathway of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:46:56Z
has_obo_namespace: biological_process
id: GO:0044637

envenomation resulting in positive regulation of complement activation, classical pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation, classical pathway in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the positive regulation of complement activation via the classical pathway of the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:51:36Z
has_obo_namespace: biological_process
id: GO:0044638

envenomation resulting in modulation of complement activation, lectin pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the lectin pathway in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:53:36Z
has_exact_synonym: envenomation resulting in regulation of complement activation, lectin pathway in other organism
has_obo_namespace: biological_process
id: GO:0044639

envenomation resulting in negative regulation of complement activation, lectin pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation, lectin pathway in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant negative regulation of complement activation via the lectin pathway in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-05T04:56:30Z
has_obo_namespace: biological_process
id: GO:0044640

envenomation resulting in positive regulation of complement activation, lectin pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation, lectin pathway in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the lectin pathway in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-11T11:50:23Z
has_obo_namespace: biological_process
id: GO:0044641

envenomation resulting in modulation of complement activation, alternative pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the alternative pathway in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-11T11:53:12Z
has_exact_synonym: envenomation resulting in regulation of complement activation, alternative pathway in other organism
has_obo_namespace: biological_process
id: GO:0044642

envenomation resulting in positive regulation of complement activation, alternative pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation, alternative pathway in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the alternative pathway in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-11T11:56:48Z
has_obo_namespace: biological_process
id: GO:0044643

envenomation resulting in negative regulation of complement activation, alternative pathway in other organism
type: Class
subclass of: envenomation resulting in modulation of complement activation, alternative pathway in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant negative regulation of complement activation via the alternative pathway in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-11T12:35:11Z
has_obo_namespace: biological_process
id: GO:0044644

modulation of complement activation in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: A process that modulates the frequency, rate or extent of complement activation in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-11T12:37:50Z
has_exact_synonym: regulation of complement activation in other organism
has_obo_namespace: biological_process
id: GO:0044645

envenomation resulting in modulation of complement activation in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation in the bitten/stung organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-11T12:49:28Z
has_exact_synonym: envenomation resulting in regulation of complement activation in other organism
has_obo_namespace: biological_process
id: GO:0044646

envenomation resulting in cytolysis in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with cytolysis in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-07-11T02:13:38Z
has_obo_namespace: biological_process
id: GO:0044649

adhesion of symbiont to host cell
type: Class
subclass of: adhesion to host
definition: The attachment of a symbiont to a host cell via adhesion molecules, general stickiness etc., either directly or indirectly.
imported from: go.owl
created by: janelomax
creation date: 2012-07-12T12:42:14Z
has_obo_namespace: biological_process
id: GO:0044650

adhesion of symbiont to host epithelial cell
type: Class
subclass of: adhesion of symbiont to host cell
definition: The attachment of a symbiont to a host epithelial cell via adhesion molecules, general stickiness etc., either directly or indirectly.
imported from: go.owl
created by: janelomax
creation date: 2012-07-12T12:47:09Z
has_obo_namespace: biological_process
id: GO:0044651

adhesion of symbiont to host endothelial cell
type: Class
subclass of: adhesion of symbiont to host cell
definition: The attachment of a symbiont to a host endothelial cell via adhesion molecules, general stickiness etc., either directly or indirectly.
imported from: go.owl
created by: janelomax
creation date: 2012-07-12T12:49:07Z
has_obo_namespace: biological_process
id: GO:0044652

pore formation in membrane of other organism during symbiotic interaction
type: Class
subclass of: pore formation in membrane of other organism
subclass of: modification by symbiont of host cell membrane
definition: The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism, occurring as part of a symbiotic interaction.
imported from: go.owl
created by: janelomax
creation date: 2012-08-01T13:12:10Z
has_obo_namespace: biological_process
id: GO:0044657

pore formation in membrane of host by symbiont
type: Class
subclass of: pore formation in membrane of other organism during symbiotic interaction
definition: The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of a host organism.
imported from: go.owl
created by: janelomax
creation date: 2012-08-01T13:14:42Z
has_obo_namespace: biological_process
id: GO:0044658

cytolysis by virus of host cell
type: Class
subclass of: cytolysis by symbiont of host cells
subclass of: viral release from host cell
subclass of: killing by virus of host cell
subclass of: disruption by virus of host cell
definition: The killing by a virus of a cell in its host organism by means of the rupture of cell membranes and the loss of cytoplasm.
imported from: go.owl
created by: janelomax
creation date: 2012-08-01T13:16:39Z
has_alternative_id: GO:0019077
has_alternative_id: GO:0046756
database_cross_reference: VZ:1077
has_exact_synonym: lytic viral release
has_exact_synonym: viral release by cell lysis
has_exact_synonym: viral release by host cell lysis
has_obo_namespace: biological_process
has_related_synonym: lytic viral life cycle
id: GO:0044659
in_subset: gosubset prok

cytolysis by virus via pore formation in host cell membrane
type: Class
subclass of: cytolysis by virus of host cell
definition: The killing by a virus of a cell in its host organism by cytolysis, caused by the formation by the virus of pores in its host cell membrane.
imported from: go.owl
created by: janelomax
creation date: 2012-08-01T13:23:41Z
has_obo_namespace: biological_process
id: GO:0044660
in_subset: gosubset prok

disruption by virus of host cell
type: Class
subclass of: disruption by symbiont of host cell
definition: A process by which a virus has a negative effect on the functioning of the host's cell.
imported from: go.owl
created by: janelomax
creation date: 2012-08-01T13:41:00Z
has_obo_namespace: biological_process
id: GO:0044661
in_subset: gosubset prok

disruption by virus of host cell membrane
type: Class
subclass of: disruption by virus of host cell
subclass of: membrane disruption in other organism
subclass of: modification by symbiont of host cell membrane
definition: A process by which a virus has a negative effect on the functioning of a host cellular membrane.
imported from: go.owl
created by: janelomax
creation date: 2012-08-01T13:44:52Z
has_exact_synonym: disruption by organism of host cell membrane
has_narrow_synonym: disruption by virus of host cell membrane
has_obo_namespace: biological_process
id: GO:0044662
in_subset: gosubset prok

pore-mediated entry of viral genome into host cell
type: Class
subclass of: viral entry into host cell
subclass of: transport of virus
definition: Injection by a non-enveloped virus of the viral genome into the host cytoplasm through creation of a pore or channel in the host cell membrane(s). Usually mediated by a viral pore-forming peptide associated with the viral capsid or bacteriophage tail.
imported from: go.owl
created by: janelomax
creation date: 2012-08-16T11:08:02Z
database_cross_reference: VZ:979
has_exact_synonym: pore-mediated penetration of viral genome into host cell
has_exact_synonym: viral entry via genome injection
has_exact_synonym: viral genome translocation
has_narrow_synonym: viral genome delivery via icosahedral vertex
has_obo_namespace: biological_process
has_related_synonym: membrane puncture-mediated penetration of viral genome into host cell
has_related_synonym: viral pore-forming protein
id: GO:0044694
comment: This mechanism is used by animal viruses such as poliovirus. Various tailed bacteriophages also carry specialized proteins which open a pore or a channel in the host membrane(s) to allow genome delivery into host cytoplasm.

killing by virus of host cell by post-segregational killing
type: Class
subclass of: killing by virus of host cell
definition: The process by which a virus causes the death of daughter cells which do not contain its genes after host cell division, by a mechanism of post-segregational killing (PSK). The extrachromosomal viral DNA consist of two genes; the product of the second is long lived and toxic, while the product of the first is short lived and antagonizes the lethal action of the toxin. Daughter cells that do not contain the viral extrachromosomal element are killed by the long lived toxin, while daughter cells that do contain the viral extrachromosomal element are protected by the action of the short lived antitoxin it encodes.
imported from: go.owl
created by: janelomax
creation date: 2012-08-16T13:58:18Z
has_exact_synonym: killing by virus of host cell by PSK
has_exact_synonym: killing by virus of host cell by toxin-antitoxin system
has_obo_namespace: biological_process
id: GO:0044696
comment: Note that this process occurs after the cell division partitioning event.

morphogenesis of symbiont in host cell
type: Class
subclass of: development involved in symbiotic interaction
definition: The process in which a symbiont undergoes a change in shape or form, within the host's cell.
imported from: go.owl
created by: janelomax
creation date: 2012-09-19T14:10:53Z
has_obo_namespace: biological_process
id: GO:0044698

multi-organism reproductive process
type: Class
subclass of: multi-organism process
definition: A biological process that directly contributes to the process of producing new individuals, involving another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-09-19T15:56:30Z
has_obo_namespace: biological_process
id: GO:0044703

multi-organism reproductive behavior
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-organism behavior
definition: The specific behavior of an organism that is associated with reproduction involving another organism of the same or different species.
imported from: go.owl
created by: janelomax
creation date: 2012-09-19T16:02:12Z
has_obo_namespace: biological_process
id: GO:0044705

multi-multicellular organism process
type: Class
subclass of: multi-organism process
definition: A multicellular organism process which involves another multicellular organism of the same or different species.
imported from: go.owl
created by: janelomax
creation date: 2012-09-19T16:06:16Z
has_obo_namespace: biological_process
id: GO:0044706

envenomation resulting in modulation of acid-sensing ion channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of ion channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-06T15:58:36Z
has_exact_synonym: envenomation resulting in modulation of ASIC channel activity in other organism
has_obo_namespace: biological_process
id: GO:0044733

envenomation resulting in positive regulation of acid-sensing ion channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of acid-sensing ion channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant positive regulation in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-06T16:02:01Z
has_exact_synonym: envenomation resulting in positive regulation of ASIC channel activity in other organism
has_obo_namespace: biological_process
id: GO:0044734

envenomation resulting in negative regulation of acid-sensing ion channel activity in other organism
type: Class
subclass of: envenomation resulting in modulation of acid-sensing ion channel activity in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant negative regulation in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-06T16:05:58Z
has_exact_synonym: envenomation resulting in negative regulation of ASIC channel activity in other organism
has_obo_namespace: biological_process
id: GO:0044735

modulation of acid-sensing ion channel in other organism
type: Class
subclass of: modulation of ion channel activity in other organism
definition: Any process in which an organism effects a change in the frequency, rate or extent of the activity of an acid-sensing ion channel (ASIC) in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-06T16:51:24Z
has_exact_synonym: regulation of ASIC channel in other organism
has_exact_synonym: regulation of acid-sensing ion channel in other organism
has_obo_namespace: biological_process
id: GO:0044737

negative regulation of acid-sensing ion channel in other organism
type: Class
subclass of: modulation of acid-sensing ion channel in other organism
definition: Any process in which an organism negatively regulates the activity of a voltage-gated sodium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-06T16:55:23Z
has_exact_synonym: negative regulation of ASIC channel in other organism
has_obo_namespace: biological_process
id: GO:0044738

positive regulation of acid-sensing ion channel in other organism
type: Class
subclass of: modulation of acid-sensing ion channel in other organism
definition: Any process in which an organism positively regulates the activity of a voltage-gated sodium channel in another organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-06T16:56:27Z
has_exact_synonym: positive regulation of ASIC channel in other organism
has_obo_namespace: biological_process
id: GO:0044739

negative regulation of sensory perception of pain in other organism
type: Class
subclass of: modulation of sensory perception of pain in other organism
definition: A process that negatively regulates the sensory perception of pain in a different organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-07T13:43:10Z
has_exact_synonym: inhibition of sensory perception of pain in another organism
has_obo_namespace: biological_process
id: GO:0044740

envenomation resulting in negative regulation of sensory perception of pain in other organism
type: Class
subclass of: envenomation resulting in modulation of sensory perception of pain in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the inhibition of the sensory perception of pain in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-07T14:02:14Z
has_exact_synonym: envenomation resulting in inhibition of sensory perception of pain in other organism
has_obo_namespace: biological_process
id: GO:0044741

envenomation resulting in modulation of sensory perception of pain in other organism
type: Class
subclass of: envenomation resulting in modification of morphology or physiology of other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the sensory perception of pain in the bitten organism.
imported from: go.owl
created by: janelomax
creation date: 2012-11-07T14:26:38Z
has_exact_synonym: envenomation resulting in regulation of sensory perception of pain in other organism
has_obo_namespace: biological_process
id: GO:0044742

modulation by symbiont of host synaptic transmission
type: Class
subclass of: modulation by symbiont of host neurological system process
subclass of: modulation by symbiont of host cellular process
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2012-12-06T15:34:05Z
has_exact_synonym: regulation by symbiont of host synaptic transmission
has_obo_namespace: biological_process
id: GO:0044758
in_subset: gosubset prok

negative regulation by symbiont of host synaptic transmission
type: Class
subclass of: modulation by symbiont of host synaptic transmission
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2012-12-06T15:37:25Z
has_obo_namespace: biological_process
id: GO:0044759
in_subset: gosubset prok

modulation by symbiont of host cholinergic synaptic transmission
type: Class
subclass of: modulation by symbiont of host synaptic transmission
definition: Any process in which a symbiont organism modulates the frequency, rate or extent of cholinergic synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse via the neurotransmitter choline, in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2012-12-06T15:39:46Z
has_exact_synonym: regulation by symbiont of host cholinergic synaptic transmission
has_obo_namespace: biological_process
id: GO:0044760
in_subset: gosubset prok

negative regulation by symbiont of host cholinergic synaptic transmission
type: Class
subclass of: negative regulation by symbiont of host synaptic transmission
subclass of: modulation by symbiont of host cholinergic synaptic transmission
definition: Any process in which a symbiont organism negatively regulates cholinergic synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse via the neurotransmitter choline, in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2012-12-06T15:43:53Z
has_obo_namespace: biological_process
id: GO:0044761
in_subset: gosubset prok

negative regulation by symbiont of host neurotransmitter secretion
type: Class
subclass of: modulation by symbiont of host neurotransmitter secretion
definition: Any process in which a symbiont organism negatively regulates the regulated release of a neurotransmitter from a cell in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2012-12-06T15:52:20Z
has_obo_namespace: biological_process
id: GO:0044762
in_subset: gosubset prok

multi-organism cellular process
type: Class
subclass of: multi-organism process
definition: Any process that is carried out at the cellular level which involves another organism of the same or different species.
imported from: go.owl
created by: janelomax
creation date: 2012-12-11T17:00:50Z
has_obo_namespace: biological_process
id: GO:0044764

multi-organism transport
type: Class
subclass of: multi-organism process
definition: The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore, involving more than one organism.
imported from: go.owl
created by: janelomax
creation date: 2012-12-13T16:25:50Z
has_obo_namespace: biological_process
id: GO:0044766

modulation by host of viral process
type: Class
subclass of: modification by host of symbiont morphology or physiology
definition: A process in which a host organism modulates the frequency, rate or extent of any of a process being mediated by a virus with which it is infected.
imported from: go.owl
created by: janelomax
creation date: 2013-06-06T10:50:49Z
has_obo_namespace: biological_process
id: GO:0044788
in_subset: virus checked

modulation by host of viral release from host cell
type: Class
subclass of: modulation by host of viral process
definition: A process in which a host organism modulates the frequency, rate or extent of the release of a virus with which it is infected, from its cells.
imported from: go.owl
created by: janelomax
creation date: 2013-06-06T10:51:10Z
has_obo_namespace: biological_process
id: GO:0044789

negative regulation by host of viral release from host cell
type: Class
subclass of: modulation by host of viral release from host cell
subclass of: negative regulation by host of viral process
definition: A process in which a host organism stops, prevents or reduces the frequency, rate or extent of the release of a virus with which it is infected, from its cells.
imported from: go.owl
created by: janelomax
creation date: 2013-06-06T10:51:27Z
has_obo_namespace: biological_process
id: GO:0044790
in_subset: virus checked

positive regulation by host of viral release from host cell
type: Class
subclass of: modulation by host of viral release from host cell
subclass of: positive regulation by host of viral process
definition: A process in which a host organism activates or increases the frequency, rate or extent of the release of a virus with which it is infected, from its cells.
imported from: go.owl
created by: janelomax
creation date: 2013-06-06T10:51:48Z
has_obo_namespace: biological_process
id: GO:0044791

negative regulation by host of viral process
type: Class
subclass of: modulation by host of viral process
definition: A process in which a host organism stops, prevents or reduces the frequency, rate or extent of a process being mediated by a virus with which it is infected.
imported from: go.owl
created by: janelomax
creation date: 2013-06-06T11:16:00Z
has_obo_namespace: biological_process
id: GO:0044793
in_subset: virus checked

positive regulation by host of viral process
type: Class
subclass of: modulation by host of viral process
definition: A process in which a host organism activates or increases the frequency, rate or extent of the release of a process being mediated by a virus with which it is infected.
imported from: go.owl
created by: janelomax
creation date: 2013-06-06T11:33:51Z
has_obo_namespace: biological_process
id: GO:0044794

multi-organism membrane fusion
type: Class
subclass of: multi-organism membrane organization
definition: The membrane organization process that joins two lipid bilayers to form a single membrane, involving more than one organism.
imported from: go.owl
created by: janelomax
creation date: 2013-09-10T15:06:11Z
has_obo_namespace: biological_process
id: GO:0044800

multi-organism membrane organization
type: Class
subclass of: multi-organism process
definition: A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane, involving more than one organism.
imported from: go.owl
created by: janelomax
creation date: 2013-09-10T15:11:41Z
has_obo_namespace: biological_process
id: GO:0044803

viral genome integration into host DNA
type: Class
subclass of: viral process
definition: The insertion into a host genome of viral DNA, usually by the action of an integrase enzyme. Once integrated, the provirus persists in the host cell and serves as a template for the transcription of viral genes and replication of the viral genome, leading to the production of new viruses.
imported from: go.owl
created by: janelomax
creation date: 2014-02-04T16:58:43Z
has_exact_synonym: viral genome integration
has_obo_namespace: biological_process
id: GO:0044826

modulation by host of viral genome replication
type: Class
subclass of: modulation by host of viral process
definition: A process in which a host organism modulates the frequency, rate or extent of viral genome replication.
imported from: go.owl
created by: janelomax
creation date: 2014-02-06T11:26:45Z
has_exact_synonym: regulation by host of viral genome reproduction
has_obo_namespace: biological_process
id: GO:0044827

negative regulation by host of viral genome replication
type: Class
subclass of: negative regulation by host of viral process
subclass of: modulation by host of viral genome replication
definition: A process in which a host organism stops, prevents or reduces the frequency, rate or extent of viral genome replication.
imported from: go.owl
created by: janelomax
creation date: 2014-02-06T11:34:23Z
has_obo_namespace: biological_process
id: GO:0044828

positive regulation by host of viral genome replication
type: Class
subclass of: positive regulation by host of viral process
subclass of: modulation by host of viral genome replication
definition: A process in which a host organism activates or increases the frequency, rate or extent of viral genome replication.
imported from: go.owl
created by: janelomax
creation date: 2014-02-06T11:35:07Z
has_obo_namespace: biological_process
id: GO:0044829

modulation by host of viral RNA genome replication
type: Class
subclass of: modulation by host of viral genome replication
definition: A process in which a host organism modulates the frequency, rate or extent of viral RNA genome replication.
imported from: go.owl
created by: janelomax
creation date: 2014-02-06T11:43:16Z
has_exact_synonym: regulation by host of viral RNA genome replication
has_obo_namespace: biological_process
id: GO:0044830

modulation by virus of host cytokine production
type: Class
subclass of: modulation by virus of host immune response
definition: Any process in which a virus modulates the frequency, rate or extent of cytokine production in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2014-02-06T12:49:02Z
has_obo_namespace: biological_process
id: GO:0044831

positive regulation by virus of host cytokine production
type: Class
subclass of: modulation by virus of host cytokine production
definition: The process in which a virus increases the frequency, rate or extent of cytokine production in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2014-02-06T13:04:23Z
has_obo_namespace: biological_process
id: GO:0044832

modulation by virus of host protein transport
type: Class
subclass of: modulation by virus of host process
subclass of: modulation by symbiont of host intracellular transport
definition: Any viral process that modulates the frequency, rate or extent of protein transport in its host organism.
imported from: go.owl
created by: janelomax
creation date: 2014-02-06T13:25:52Z
has_obo_namespace: biological_process
id: GO:0044833

male courtship behavior, veined wing generated song production
type: Class
subclass of: male courtship behavior
definition: The process during wing vibration where the male insect produces a species-specific acoustic signal called a love song.
imported from: go.owl
has_broad_synonym: male courtship behavior, song production
has_broad_synonym: male courtship behaviour, song production
has_exact_synonym: male courtship behaviour, veined wing generated song production
has_obo_namespace: biological_process
id: GO:0045433

negative regulation of female receptivity, post-mating
type: Class
subclass of: negative regulation of female receptivity
subclass of: regulation of female receptivity, post-mating
definition: Any process that stops, prevents or reduces the receptiveness of a female to male advances subsequent to mating.
imported from: go.owl
has_exact_synonym: down regulation of female receptivity, post-mating
has_exact_synonym: down-regulation of female receptivity, post-mating
has_exact_synonym: downregulation of female receptivity, post-mating
has_narrow_synonym: inhibition of female receptivity, post-mating
has_obo_namespace: biological_process
id: GO:0045434

regulation of female receptivity
type: Class
subclass of: female mating behavior
definition: Any process that modulates the frequency, rate or extent of the willingness or readiness of a female to receive male advances.
imported from: go.owl
has_alternative_id: GO:0060181
has_obo_namespace: biological_process
has_related_synonym: female receptivity
id: GO:0045924

positive regulation of female receptivity
type: Class
subclass of: regulation of female receptivity
definition: Any process that activates or increases the receptiveness of a female to male advances.
imported from: go.owl
has_exact_synonym: up regulation of female receptivity
has_exact_synonym: up-regulation of female receptivity
has_exact_synonym: upregulation of female receptivity
has_narrow_synonym: activation of female receptivity
has_narrow_synonym: stimulation of female receptivity
has_obo_namespace: biological_process
id: GO:0045925

regulation of female receptivity, post-mating
type: Class
subclass of: regulation of female receptivity
definition: Any process that modulates the receptiveness of a female to male advances subsequent to mating.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046008

positive regulation of female receptivity, post-mating
type: Class
subclass of: positive regulation of female receptivity
subclass of: regulation of female receptivity, post-mating
definition: Any process that increases the receptiveness of a female to male advances subsequent to mating.
imported from: go.owl
has_exact_synonym: up regulation of female receptivity, post-mating
has_exact_synonym: up-regulation of female receptivity, post-mating
has_exact_synonym: upregulation of female receptivity, post-mating
has_narrow_synonym: activation of female receptivity, post-mating
has_narrow_synonym: stimulation of female receptivity, post-mating
has_obo_namespace: biological_process
id: GO:0046009

sperm competition
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: Any process that contributes to the success of sperm fertilization in multiply-mated females.
imported from: go.owl
database_cross_reference: Wikipedia:Sperm_competition
has_obo_namespace: biological_process
id: GO:0046692

sperm storage
type: Class
subclass of: sperm competition
definition: The retention of sperm by a female following mating.
imported from: go.owl
has_exact_synonym: retention of sperm
has_exact_synonym: sequestering of sperm
has_exact_synonym: sequestration of sperm
has_exact_synonym: sperm retention
has_exact_synonym: sperm sequestering
has_exact_synonym: sperm sequestration
has_exact_synonym: storage of sperm
has_obo_namespace: biological_process
id: GO:0046693

sperm incapacitation
type: Class
subclass of: sperm competition
definition: The process in which the use of stored sperm from the first-mating male is inhibited by the seminal fluid of subsequently mating males.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046694

viral entry into host cell
type: Class
subclass of: entry into host cell
definition: The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
imported from: go.owl
has_alternative_id: GO:0019063
database_cross_reference: Reactome:REACT_6232
database_cross_reference: Reactome:REACT_6282
database_cross_reference: VZ:936
has_exact_synonym: entry of virus into host cell
has_exact_synonym: phage translocation
has_exact_synonym: viral penetration
has_exact_synonym: virion penetration
has_exact_synonym: virion penetration into host cell
has_exact_synonym: virus entry into host cell
has_obo_namespace: biological_process
id: GO:0046718
in_subset: goslim virus
in_subset: virus checked
comment: Viral attachment to the host cell is not part of viral entry in GO because virus attachment does not always lead to viral entry: attachment can also result in the virion being carried by the host cell to another location.

regulation by virus of viral protein levels in host cell
type: Class
subclass of: modulation by virus of host morphology or physiology
definition: Any virus-mediated process that modulates the levels of viral proteins in a cell.
imported from: go.owl
has_exact_synonym: regulation of viral protein levels
has_obo_namespace: biological_process
id: GO:0046719

negative regulation of viral protein levels in host cell
type: Class
subclass of: regulation by virus of viral protein levels in host cell
definition: Any process that reduces the levels of viral proteins in a cell.
imported from: go.owl
has_exact_synonym: down regulation of viral protein levels in host cell
has_exact_synonym: down-regulation of viral protein levels in host cell
has_exact_synonym: downregulation of viral protein levels in host cell
has_exact_synonym: negative regulation of viral protein levels
has_narrow_synonym: inhibition of viral protein levels in host cell
has_obo_namespace: biological_process
id: GO:0046725

positive regulation of viral protein levels in host cell
type: Class
subclass of: regulation by virus of viral protein levels in host cell
definition: Any process that increases the levels of viral proteins in a cell.
imported from: go.owl
has_exact_synonym: positive regulation of viral protein levels
has_exact_synonym: up regulation of viral protein levels in host cell
has_exact_synonym: up-regulation of viral protein levels in host cell
has_exact_synonym: upregulation of viral protein levels in host cell
has_narrow_synonym: activation of viral protein levels in host cell
has_narrow_synonym: stimulation of viral protein levels in host cell
has_obo_namespace: biological_process
id: GO:0046726

induction of host immune response by virus
type: Class
subclass of: induction by symbiont of host defense response
subclass of: modulation by virus of host immune response
definition: The induction by a virus of an immune response in the host organism.
imported from: go.owl
has_exact_synonym: activation of host immune response by virus
has_obo_namespace: biological_process
id: GO:0046730

passive induction of host immune response by virus
type: Class
subclass of: induction of host immune response by virus
definition: The unintentional stimulation by a virus of a host defense response to viral infection, as part of the viral infectious cycle.
imported from: go.owl
has_exact_synonym: passive activation of host immune response by virus
has_exact_synonym: passive viral induction of host immune response
has_obo_namespace: biological_process
id: GO:0046731

active induction of host immune response by virus
type: Class
subclass of: induction of host immune response by virus
definition: The intentional, virally-encoded stimulation of a host defense response to viral infection.
imported from: go.owl
database_cross_reference: Reactome:REACT_6213
database_cross_reference: Reactome:REACT_6229
database_cross_reference: Reactome:REACT_6243
has_exact_synonym: active viral induction of host immune response
has_obo_namespace: biological_process
id: GO:0046732

passive induction of host humoral immune response by virus
type: Class
subclass of: passive induction of host immune response by virus
definition: The unintentional stimulation by a virus of a host humoral defense response to viral infection, as part of the viral infectious cycle.
imported from: go.owl
has_exact_synonym: passive induction of humoral immune response in host by virus
has_exact_synonym: passive viral activation of humoral immune response in host
has_exact_synonym: passive viral induction of humoral immune response in host
has_obo_namespace: biological_process
id: GO:0046733

passive induction of host cell-mediated immune response by virus
type: Class
subclass of: passive induction of host immune response by virus
definition: The unintentional stimulation by a virus of a cell-mediated host defense response to viral infection, as part of the viral infectious cycle.
imported from: go.owl
has_exact_synonym: passive induction of cell-mediated immune response in host by virus
has_exact_synonym: passive viral activation of cell-mediated immune response in host
has_exact_synonym: passive viral induction of cell-mediated immune response in host
has_obo_namespace: biological_process
id: GO:0046734

passive induction of host innate immune response by virus
type: Class
subclass of: passive induction of host immune response by virus
definition: The unintentional stimulation by a virus of an innate host defense response to viral infection, as part of the viral infectious cycle.
imported from: go.owl
has_exact_synonym: passive induction of innate immune response in host by virus
has_exact_synonym: passive viral activation of innate immune response in host
has_exact_synonym: passive viral induction of innate immune response in host
has_obo_namespace: biological_process
id: GO:0046735

active induction of humoral immune response in host by virus
type: Class
subclass of: active induction of host immune response by virus
definition: The intentional, virally-encoded stimulation of a host humoral defense response to viral infection.
imported from: go.owl
has_exact_synonym: active viral induction of humoral immune response in host
has_obo_namespace: biological_process
id: GO:0046736

active induction of cell-mediated immune response in host by virus
type: Class
subclass of: active induction of host immune response by virus
definition: The intentional, virally-encoded stimulation of a cell-mediated host defense response to viral infection.
imported from: go.owl
has_exact_synonym: active viral induction of cell-mediated immune response in host
has_obo_namespace: biological_process
id: GO:0046737

active induction of innate immune response in host by virus
type: Class
subclass of: active induction of host immune response by virus
definition: The intentional, virally-encoded stimulation of an innate host defense response to viral infection.
imported from: go.owl
has_exact_synonym: active viral induction of innate immune response in host
has_obo_namespace: biological_process
id: GO:0046738

transport of virus in multicellular host
type: Class
subclass of: movement in host
subclass of: transport of virus
definition: The transport of a virus between cells in a multicellular organism. The cells can be adjacent or spatially separated (e.g. in different tissues or organs).
imported from: go.owl
has_exact_synonym: spread of virus within multicellular host
has_exact_synonym: viral spread within multicellular host
has_obo_namespace: biological_process
has_related_synonym: spread of virus in multicellular host
id: GO:0046739
in_subset: virus checked

transport of virus in host, cell to cell
type: Class
subclass of: transport of virus in multicellular host
subclass of: multi-organism intercellular transport
definition: The transport of a virus between adjacent cells in a multicellular organism.
imported from: go.owl
has_exact_synonym: cell to cell spread of virus within host
has_exact_synonym: intercellular virus transport
has_exact_synonym: spread of virus within host, cell to cell
has_exact_synonym: viral spread within host, cell to cell
has_obo_namespace: biological_process
has_related_synonym: spread of virus in host, cell to cell
id: GO:0046740
in_subset: goslim virus
in_subset: virus checked

transport of virus in host, tissue to tissue
type: Class
subclass of: transport of virus in multicellular host
definition: The transport of a virus between tissues in a multicellular organism.
imported from: go.owl
has_exact_synonym: spread of virus within host, tissue to tissue
has_exact_synonym: tissue to tissue spread of virus within host
has_exact_synonym: viral spread within host, tissue to tissue
has_obo_namespace: biological_process
has_related_synonym: spread of virus in host, tissue to tissue
id: GO:0046741

viral capsid secondary envelopment
type: Class
subclass of: viral process
definition: The process in which a capsid acquires another membrane envelope, subsequent to acquiring an initial membrane envelope.
imported from: go.owl
has_alternative_id: GO:0046746
has_alternative_id: GO:0046747
has_alternative_id: GO:0046748
has_alternative_id: GO:0046768
has_alternative_id: GO:0046769
has_alternative_id: GO:0046770
has_exact_synonym: outer nuclear membrane viral budding during viral capsid re-envelopment
has_exact_synonym: viral budding from ER membrane by viral capsid re-envelopment
has_exact_synonym: viral budding from Golgi membrane by viral capsid re-envelopment
has_exact_synonym: viral budding from inner nuclear membrane by viral capsid re-envelopment
has_exact_synonym: viral budding from nuclear membrane by viral capsid re-envelopment
has_exact_synonym: viral budding from outer nuclear membrane by viral capsid re-envelopment
has_exact_synonym: viral budding from outer nuclear membrane during viral capsid re-envelopment
has_exact_synonym: viral budding from plasma membrane by viral capsid re-envelopment
has_exact_synonym: virus budding from ER membrane by viral capsid re-envelopment
has_exact_synonym: virus budding from Golgi membrane by viral capsid re-envelopment
has_exact_synonym: virus budding from inner nuclear membrane by viral capsid re-envelopment
has_exact_synonym: virus budding from nuclear membrane by viral capsid re-envelopment
has_exact_synonym: virus budding from outer nuclear membrane by viral capsid re-envelopment
has_obo_namespace: biological_process
has_related_synonym: ER membrane viral budding during viral capsid re-envelopment
has_related_synonym: Golgi membrane viral budding during viral capsid re-envelopment
has_related_synonym: endoplasmic reticulum membrane viral budding during viral capsid re-envelopment
has_related_synonym: inner nuclear membrane viral budding during viral capsid re-envelopment
has_related_synonym: nuclear membrane viral budding during viral capsid re-envelopment
has_related_synonym: plasma membrane viral budding during viral capsid re-envelopment
has_related_synonym: viral budding from ER membrane during viral capsid re-envelopment
has_related_synonym: viral budding from Golgi membrane during viral capsid re-envelopment
has_related_synonym: viral budding from inner nuclear membrane during viral capsid re-envelopment
has_related_synonym: viral budding from nuclear membrane during viral capsid re-envelopment
has_related_synonym: viral budding from plasma membrane during viral capsid re-envelopment
has_related_synonym: viral capsid re-envelopment
has_related_synonym: virus budding from ER membrane during viral capsid re-envelopment
has_related_synonym: virus budding from Golgi membrane during viral capsid re-envelopment
has_related_synonym: virus budding from inner nuclear membrane during viral capsid re-envelopment
has_related_synonym: virus budding from nuclear membrane during viral capsid re-envelopment
has_related_synonym: virus budding from outer nuclear membrane during viral capsid re-envelopment
has_related_synonym: virus budding from plasma membrane during viral capsid re-envelopment
id: GO:0046745

viral capsid precursor transport to host cell nucleus
type: Class
subclass of: transport of virus
definition: Any process in which viral capsid precursors are transported to a specific location in the nucleus, thus accumulating the necessary components for assembly of a capsid.
imported from: go.owl
has_broad_synonym: establishment and maintenance of viral capsid precursor localization in nucleus
has_broad_synonym: localization of viral capsid precursors in nucleus
has_broad_synonym: nuclear localization of viral capsid precursors
has_broad_synonym: viral capsid precursor localisation in host cell nucleus
has_broad_synonym: viral capsid precursor localization in host cell nucleus
has_broad_synonym: viral capsid precursor localization to host cell nucleus
has_obo_namespace: biological_process
id: GO:0046752
in_subset: virus checked

non-lytic viral release
type: Class
subclass of: viral release from host cell
subclass of: transport of virus
definition: The exit of a viral particle from a cell that does not involve cell lysis.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046753
in_subset: virus checked

viral exocytosis
type: Class
subclass of: non-lytic viral release
definition: The exit of enveloped or unenveloped virion particles from the host cell by exocytosis, without causing cell lysis.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046754

viral budding
type: Class
subclass of: viral process
subclass of: multi-organism membrane budding
definition: A viral process by which enveloped viruses acquire a host-derived membrane enriched in viral proteins to form their external envelope. The process starts when nucleocapsids, assembled or in the process of being built, induce formation of a membrane curvature in the host plasma or organelle membrane and wrap up in the forming bud. The process ends when the bud is eventually pinched off by membrane scission to release the enveloped particle into the lumenal or extracellular space.
imported from: go.owl
has_alternative_id: GO:0046744
database_cross_reference: VZ:1947
has_narrow_synonym: virion budding
has_obo_namespace: biological_process
has_related_synonym: viral capsid envelopment
has_related_synonym: virus budding
id: GO:0046755
in_subset: goslim virus
in_subset: virus checked

viral budding from Golgi membrane
type: Class
subclass of: viral budding
definition: A viral budding that starts with formation of a membrane curvature in the host Golgi membrane.
imported from: go.owl
has_alternative_id: GO:0046750
has_alternative_id: GO:0046763
has_exact_synonym: Golgi membrane viral budding
has_exact_synonym: virus budding from Golgi membrane
has_obo_namespace: biological_process
has_related_synonym: Golgi membrane viral budding during viral capsid envelopment
has_related_synonym: viral budding from Golgi membrane by viral capsid envelopment
has_related_synonym: viral budding from Golgi membrane during viral capsid envelopment
has_related_synonym: virus budding from Golgi membrane by viral capsid envelopment
has_related_synonym: virus budding from Golgi membrane during viral capsid envelopment
id: GO:0046760
in_subset: virus checked

viral budding from plasma membrane
type: Class
subclass of: non-lytic viral release
subclass of: viral budding
definition: A viral budding that starts with formation of a membrane curvature in the host plasma membrane.
imported from: go.owl
has_alternative_id: GO:0046766
has_alternative_id: GO:0046767
database_cross_reference: Reactome:REACT_6193
has_exact_synonym: plasma membrane viral budding
has_exact_synonym: virus budding from plasma membrane
has_exact_synonym: virus budding from plasma membrane by viral capsid envelopment
has_obo_namespace: biological_process
has_related_synonym: plasma membrane viral budding during viral capsid envelopment
has_related_synonym: viral budding from plasma membrane by viral capsid envelopment
has_related_synonym: viral budding from plasma membrane during viral capsid envelopment
has_related_synonym: virus budding from plasma membrane during viral capsid envelopment
id: GO:0046761
in_subset: virus checked

viral budding from ER membrane
type: Class
subclass of: viral budding
definition: A viral budding that starts with formation of a membrane curvature in the host ER membrane.
imported from: go.owl
has_alternative_id: GO:0046751
has_alternative_id: GO:0046764
has_exact_synonym: ER membrane viral budding
has_exact_synonym: endoplasmic reticulum membrane viral budding
has_exact_synonym: virus budding from ER membrane
has_exact_synonym: virus budding from ER membrane by viral capsid envelopment
has_obo_namespace: biological_process
has_related_synonym: ER membrane viral budding during viral capsid envelopment
has_related_synonym: endoplasmic reticulum membrane viral budding during viral capsid envelopment
has_related_synonym: viral budding from ER membrane by viral capsid envelopment
has_related_synonym: viral budding from ER membrane during viral capsid envelopment
has_related_synonym: virus budding from ER membrane during viral capsid envelopment
id: GO:0046762
in_subset: virus checked

viral budding from nuclear membrane
type: Class
subclass of: viral budding
definition: A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.
imported from: go.owl
has_alternative_id: GO:0046749
has_exact_synonym: nuclear membrane viral budding
has_exact_synonym: virus budding from nuclear membrane
has_exact_synonym: virus budding from nuclear membrane by viral capsid envelopment
has_obo_namespace: biological_process
has_related_synonym: nuclear membrane viral budding during viral capsid envelopment
has_related_synonym: viral budding from nuclear membrane by viral capsid envelopment
has_related_synonym: viral budding from nuclear membrane during viral capsid envelopment
has_related_synonym: virus budding from nuclear membrane during viral capsid envelopment
id: GO:0046765

viral budding from inner nuclear membrane
type: Class
subclass of: viral budding from nuclear membrane
definition: The envelopment of a virus, in which the nucleocapsid evaginates from the host inner nuclear membrane system into the perinuclear space, thus acquiring a membrane envelope.
imported from: go.owl
has_exact_synonym: virus budding from inner nuclear membrane by viral capsid envelopment
has_obo_namespace: biological_process
has_related_synonym: inner nuclear membrane viral budding during viral capsid envelopment
has_related_synonym: viral budding from inner nuclear membrane by viral capsid envelopment
has_related_synonym: viral budding from inner nuclear membrane during viral capsid envelopment
has_related_synonym: virus budding from inner nuclear membrane during viral capsid envelopment
id: GO:0046771

viral budding from outer nuclear membrane
type: Class
subclass of: viral budding from nuclear membrane
definition: The envelopment of a virus, in which the nucleocapsid evaginates from the host outer nuclear membrane system, thus acquiring a membrane envelope.
imported from: go.owl
has_exact_synonym: virus budding from outer nuclear membrane by viral capsid envelopment
has_obo_namespace: biological_process
has_related_synonym: outer nuclear membrane viral budding during viral capsid envelopment
has_related_synonym: viral budding from outer nuclear membrane during viral capsid envelopment
has_related_synonym: virus budding from outer nuclear membrane during viral capsid envelopment
id: GO:0046772

suppression by virus of host translation termination
type: Class
subclass of: modulation by virus of host translation
subclass of: multi-organism biosynthetic process
definition: Any viral process that stops, prevents, or reduces the frequency, rate or extent of translational termination of a host mRNA.
imported from: go.owl
has_exact_synonym: negative regulation by virus of host cell protein biosynthesis shutoff
has_exact_synonym: negative regulation by virus of host cell protein biosynthetic process shutoff
has_exact_synonym: viral inhibition of host cell protein biosynthesis shutoff
has_exact_synonym: viral inhibition of host cell protein biosynthetic process shutoff
has_exact_synonym: viral inhibition of termination of host cell protein biosynthesis
has_exact_synonym: viral inhibition of termination of host cell protein biosynthetic process
has_exact_synonym: viral suppression of termination by host of host cell protein biosynthesis
has_exact_synonym: viral suppression of termination by host of host cell protein biosynthetic process
has_obo_namespace: biological_process
has_related_synonym: suppression by virus of host termination of protein biosynthetic process
id: GO:0046773

suppression by virus of host intracellular interferon activity
type: Class
subclass of: evasion or tolerance by virus of host immune response
subclass of: modulation by virus of host immune response
definition: Any viral process that results in the inhibition of interferon activity within the host cell.
imported from: go.owl
has_exact_synonym: negative regulation by virus of intracellular interferon activity
has_exact_synonym: suppression by virus of intracellular interferon activity in host
has_obo_namespace: biological_process
id: GO:0046774

suppression by virus of host cytokine production
type: Class
subclass of: modulation by virus of host cytokine production
subclass of: suppression of defense response of other organism involved in symbiotic interaction
subclass of: negative regulation by symbiont of host immune response
definition: Any viral process that results in the inhibition of host cell cytokine production.
imported from: go.owl
has_exact_synonym: negative regulation by virus of host cytokine production
has_obo_namespace: biological_process
id: GO:0046775

suppression by virus of host antigen processing and presentation of peptide antigen via MHC class I
type: Class
subclass of: suppression by virus of host antigen processing and presentation
definition: Any viral process that inhibits a host antigen-presenting cell expressing a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.
imported from: go.owl
database_cross_reference: VZ:819
has_exact_synonym: inhibition of host MHC class I molecule presentation by virus
has_exact_synonym: negative regulation by virus of MHC class I cell surface presentation
has_exact_synonym: suppression by virus of MHC class I cell surface presentation in host
has_exact_synonym: suppression by virus of host MHC class I cell surface presentation
has_obo_namespace: biological_process
has_related_synonym: major histocompatibility complex
id: GO:0046776

modification by virus of host mRNA processing
type: Class
subclass of: modulation by virus of host gene expression
definition: Any viral process that interferes with the processing of mRNA in the host cell.
imported from: go.owl
database_cross_reference: Reactome:REACT_6168
database_cross_reference: Reactome:REACT_6173
database_cross_reference: Reactome:REACT_6287
has_exact_synonym: viral perturbation of host mRNA processing
has_obo_namespace: biological_process
id: GO:0046778

suppression by virus of expression of host genes with introns
type: Class
subclass of: suppression by virus of host transcription
definition: Any viral process that discriminates against and subsequently inhibits host transcripts containing introns, thus allowing only intronless viral mRNA to be fully processed.
imported from: go.owl
has_exact_synonym: negative regulation by virus of expression of host genes with introns
has_exact_synonym: viral inhibition of expression of host genes with introns
has_obo_namespace: biological_process
id: GO:0046779

suppression by virus of host mRNA splicing
type: Class
subclass of: suppression by virus of host mRNA processing
definition: Any viral process that inhibits the splicing of host mRNA, thus reducing host protein production.
imported from: go.owl
has_alternative_id: GO:0046781
has_exact_synonym: negative regulation by virus of host mRNA splicing
has_exact_synonym: suppression by virus of host splicing factor activity
has_exact_synonym: viral dispersion of host splicing factors
has_exact_synonym: viral inhibition of host mRNA splicing
has_obo_namespace: biological_process
id: GO:0046780

modification by virus of host polysomes
type: Class
subclass of: modulation by virus of host translation
definition: Any viral process that interferes with and inhibits the assembly and function of polysomes.
imported from: go.owl
has_exact_synonym: viral perturbation of polysomes
has_obo_namespace: biological_process
id: GO:0046783
comment: See also the cellular component term 'polysome ; GO:0005844'.

viral mRNA export from host cell nucleus
type: Class
subclass of: intracellular transport of virus
definition: The directed movement of intronless viral mRNA from the host nucleus to the cytoplasm for translation.
imported from: go.owl
has_exact_synonym: intronless viral mRNA export from host cell nucleus
has_exact_synonym: intronless viral mRNA export out of nucleus
has_exact_synonym: intronless viral mRNA transport from nucleus to cytoplasm
has_exact_synonym: intronless viral mRNA-nucleus export
has_obo_namespace: biological_process
has_related_synonym: intronless viral mRNA export from host nucleus
id: GO:0046784
in_subset: virus checked

viral replication complex formation and maintenance
type: Class
subclass of: viral process
definition: The process of organizing and assembling viral replication proteins in preparation for viral replication.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046786

suppression by virus of host cell cycle arrest
type: Class
subclass of: modification by virus of host cell cycle regulation
definition: Viral interference in host cell processes that lead cell cycle arrest, allowing cell division to occur.
imported from: go.owl
has_exact_synonym: negative regulation by virus of cell cycle arrest
has_exact_synonym: viral inhibition of cell cycle arrest
has_obo_namespace: biological_process
id: GO:0046792

induction by virus of phosphorylation of host RNA polymerase II
type: Class
subclass of: modulation by virus of host transcription
subclass of: induction by virus of host protein phosphorylation
definition: Any process in which a virus activates the frequency, rate or extent of phosphorylation of host RNA polymerase II.
imported from: go.owl
has_broad_synonym: induction by virus of modification of host RNA polymerase II
has_exact_synonym: virus-induced modification of host RNA polymerase II
has_obo_namespace: biological_process
id: GO:0046793

transport of virus
type: Class
subclass of: viral process
subclass of: multi-organism transport
definition: The directed movement of a virus, or part of a virus, into, out of, or within a host cell.
imported from: go.owl
has_exact_synonym: viral transport
has_narrow_synonym: virion transport
has_obo_namespace: biological_process
id: GO:0046794
in_subset: goslim pir
in_subset: virus checked

recruitment of helicase-primase complex to DNA lesions
type: Class
subclass of: viral process
definition: The recruitment of the helicase-primase complex to viral DNA lesions during viral DNA repair.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046799

exit of virus from host cell nucleus by nuclear egress
type: Class
subclass of: exit of virus from host cell nucleus
definition: The directed movement of an assembled viral particle out of the host cell nucleus by budding and fusion through the nuclear membranes. In this process, enveloped viral particles are formed by budding through the inner nuclear membrane. These perinuclear enveloped particles then fuse with the outer nuclear membrane to deliver a naked capsid into the host cytoplasm.
imported from: go.owl
has_alternative_id: GO:0039676
database_cross_reference: VZ:1952
has_exact_synonym: capsid egress
has_exact_synonym: nuclear egress
has_exact_synonym: nuclear egress of viral procapsid
has_obo_namespace: biological_process
has_related_synonym: egress of viral procapsid from host cell nucleus
id: GO:0046802
in_subset: virus checked

viral scaffold assembly and maintenance
type: Class
subclass of: viral process
definition: The assembly and maintenance of the viral scaffold around which the viral capsid is constructed.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046807
in_subset: virus checked
comment: See also the cellular component term 'viral scaffold ; GO:0046806'.

receptor-mediated virion attachment to host cell
type: Class
subclass of: virion attachment to host cell
definition: The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface.
imported from: go.owl
has_exact_synonym: virion attachment, binding of host cell surface receptor
has_obo_namespace: biological_process
id: GO:0046813
in_subset: virus checked

coreceptor-mediated virion attachment to host cell
type: Class
subclass of: virion attachment to host cell
definition: The process by which a virion attaches to a host cell by binding to a co-receptor on the host cell surface.
imported from: go.owl
has_exact_synonym: virion attachment, binding of host cell surface coreceptor
has_obo_namespace: biological_process
id: GO:0046814
in_subset: virus checked

genome retention in viral capsid
type: Class
subclass of: viral process
definition: Any process in which the viral genome is retained within the capsid during genome cleavage and packaging.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0046815

mating behavior, sex discrimination
type: Class
subclass of: mating behavior
definition: The behavior of individuals for the purpose of discriminating between the sexes, for the purpose of finding a suitable mating partner.
imported from: go.owl
has_exact_synonym: mating behaviour, sex discrimination
has_obo_namespace: biological_process
id: GO:0048047

male courtship behavior, veined wing extension
type: Class
subclass of: male courtship behavior
definition: The process during courtship where the male insect extends his wings. An example of this process is found in Drosophila melanogaster.
imported from: go.owl
has_broad_synonym: male courtship behavior, wing extension
has_broad_synonym: male courtship behaviour, wing extension
has_exact_synonym: male courtship behaviour, veined wing extension
has_obo_namespace: biological_process
id: GO:0048065

plantlet formation on parent plant
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: The process in which a new plantlet develops from a meristem on the plant body. As part of this process, when the plantlet is large enough to live independently, the physical connection between the new plantlet and the main plant is severed.
imported from: go.owl
has_broad_synonym: vegetative vivipary
has_broad_synonym: vivipary
has_obo_namespace: biological_process
id: GO:0048624

homeostasis of number of cells in a free-living population
type: Class
subclass of: multi-organism cellular process
definition: The biological process involved in maintaining the steady-state number of cells within a population of free-living cells such as the bacteria in the gut.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0048874
in_subset: gosubset prok

defense response to Gram-negative bacterium
type: Class
subclass of: defense response to bacterium
definition: Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism.
imported from: go.owl
has_exact_synonym: defence response to Gram-negative bacteria
has_exact_synonym: defence response to Gram-negative bacterium
has_exact_synonym: defense response to Gram-negative bacteria
has_obo_namespace: biological_process
has_related_synonym: Gram-negative antibacterial peptide activity
id: GO:0050829

defense response to Gram-positive bacterium
type: Class
subclass of: defense response to bacterium
definition: Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.
imported from: go.owl
has_exact_synonym: defence response to Gram-positive bacteria
has_exact_synonym: defence response to Gram-positive bacterium
has_exact_synonym: defense response to Gram-positive bacteria
has_obo_namespace: biological_process
has_related_synonym: Gram-positive antibacterial peptide activity
id: GO:0050830
in_subset: gosubset prok

male-specific defense response to bacterium
type: Class
subclass of: defense response to bacterium
definition: A set of reactions, specific to males, that are triggered in response to the presence of a bacterium that act to protect the cell or organism.
imported from: go.owl
has_exact_synonym: male-specific defence response to bacteria
has_exact_synonym: male-specific defence response to bacterium
has_exact_synonym: male-specific defense response to bacteria
has_obo_namespace: biological_process
has_related_synonym: male-specific antibacterial peptide activity
id: GO:0050831

defense response to fungus
type: Class
subclass of: response to fungus
subclass of: defense response to other organism
definition: Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
imported from: go.owl
has_alternative_id: GO:0042831
has_exact_synonym: defence response to fungi
has_exact_synonym: defence response to fungus
has_exact_synonym: defense response to fungi
has_obo_namespace: biological_process
id: GO:0050832

RNA virus induced gene silencing
type: Class
subclass of: virus induced gene silencing
definition: Gene silencing induced by RNA viruses leading to a sequence-specific degradation of target mRNAs or post-transcriptional gene silencing.
imported from: go.owl
has_exact_synonym: RNA VIGS
has_exact_synonym: RNA virus-induced gene silencing
has_obo_namespace: biological_process
id: GO:0051214

DNA virus induced gene silencing
type: Class
subclass of: virus induced gene silencing
definition: Gene silencing induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or post-transcriptional gene silencing.
imported from: go.owl
has_exact_synonym: DNA VIGS
has_exact_synonym: DNA virus-induced gene silencing
has_obo_namespace: biological_process
id: GO:0051215

defense response to virus
type: Class
subclass of: response to virus
subclass of: defense response to other organism
definition: Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
imported from: go.owl
has_exact_synonym: antiviral response
has_exact_synonym: defence response to virus
has_exact_synonym: defense response to viruses
has_obo_namespace: biological_process
id: GO:0051607

induction of autolysin activity in other organism
type: Class
subclass of: positive regulation of catalytic activity in other organism involved in symbiotic interaction
definition: Any process in which an organism initiates the activity of the inactive enzyme autolysin in another organism. The autolysin enzyme belongs to, and is active in, the other organism.
imported from: go.owl
has_broad_synonym: positive regulation of autolysin activity in another organism
has_exact_synonym: activation of autolysin activity in another organism
has_exact_synonym: induction of autolysin activity in another organism
has_narrow_synonym: activation of autolysis in other organism
has_narrow_synonym: activation of autolytic activity in other organism
has_narrow_synonym: induction of autolysis in other organism
has_narrow_synonym: induction of autolytic activity in other organism
has_obo_namespace: biological_process
id: GO:0051671
in_subset: gosubset prok

catabolism by organism of cell wall peptidoglycan in other organism
type: Class
subclass of: multi-organism carbohydrate catabolic process
definition: The chemical reactions and pathways resulting in the breakdown of the cell wall peptidoglycans of another organism.
imported from: go.owl
has_exact_synonym: catabolic process of cell wall peptidoglycans of other organism
has_exact_synonym: catabolism of cell wall peptidoglycans of other organism
has_exact_synonym: cell wall peptidoglycan catabolic process in another organism
has_narrow_synonym: cell wall catabolic process in other organism
has_narrow_synonym: cell wall catabolism in other organism
has_obo_namespace: biological_process
id: GO:0051672
in_subset: gosubset prok

membrane disruption in other organism
type: Class
subclass of: modification of morphology or physiology of other organism
definition: The disruption of the membranes of another organism, leading to damage to its cells and possibly death of that organism.
imported from: go.owl
has_exact_synonym: membrane disruption in another organism
has_narrow_synonym: cytolysis, by membrane disruption, in other organism
has_obo_namespace: biological_process
id: GO:0051673
in_subset: gosubset prok

interaction with host
type: Class
subclass of: interspecies interaction between organisms
definition: An interaction between two organisms living together in more or less intimate association. The term host is used for the larger (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051701
in_subset: gosubset prok

interaction with symbiont
type: Class
subclass of: interspecies interaction between organisms
definition: An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051702
in_subset: gosubset prok

intraspecies interaction between organisms
type: Class
subclass of: multi-organism process
definition: Any process in which an organism has an effect on an organism of the same species.
imported from: go.owl
has_exact_synonym: intraspecies interaction with other organisms
has_obo_namespace: biological_process
id: GO:0051703
in_subset: goslim pir
in_subset: gosubset prok

multi-organism process
type: Class
subclass of: process
definition: A biological process which involves another organism of the same or different species.
imported from: go.owl
has_alternative_id: GO:0051706
has_exact_synonym: interaction between organisms
has_exact_synonym: physiological interaction between organisms
has_exact_synonym: physiological interaction with other organism
has_obo_namespace: biological_process
id: GO:0051704
in_subset: goslim pir
in_subset: gosubset prok

multi-organism behavior
type: Class
subclass of: multi-organism process
definition: Any process in which an organism has a behavioral effect on another organism of the same or different species.
imported from: go.owl
has_alternative_id: GO:0023032
has_alternative_id: GO:0044709
has_exact_synonym: behavioral interaction between organisms
has_exact_synonym: behavioral interaction with other organism
has_exact_synonym: behavioural interaction between organisms
has_exact_synonym: behavioural interaction with other organism
has_narrow_synonym: behavioral signaling
has_narrow_synonym: behavioral signalling
has_obo_namespace: biological_process
id: GO:0051705
in_subset: goslim pir

response to other organism
type: Class
subclass of: multi-organism process
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
imported from: go.owl
has_alternative_id: GO:0009613
has_alternative_id: GO:0042828
has_obo_namespace: biological_process
id: GO:0051707
in_subset: gosubset prok

intracellular protein transport in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism intracellular transport
definition: The directed movement of an organism's proteins within a cell of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: intracellular protein transport in other organism during symbiotic interaction
id: GO:0051708

cytolysis in other organism
type: Class
subclass of: killing of cells of other organism
subclass of: multi-organism cellular process
definition: The killing by an organism of a cell in another organism by means of the rupture of cell membranes and the loss of cytoplasm.
imported from: go.owl
has_alternative_id: GO:0001901
has_exact_synonym: cytolysis of cells of another organism
has_narrow_synonym: cytolysis of cells of another, non-host, organism
has_narrow_synonym: cytolysis of cells of competing organism
has_obo_namespace: biological_process
id: GO:0051715
in_subset: gosubset prok

cytolysis in other organism involved in symbiotic interaction
type: Class
subclass of: cytolysis in other organism
subclass of: killing of cells in other organism involved in symbiotic interaction
definition: The killing by an organism of a cell in a second organism by means of the rupture of cell membranes and the loss of cytoplasm, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: cytolysis of cells in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: cytolysis of cells in other organism during symbiotic interaction
id: GO:0051801
in_subset: gosubset prok

evasion or tolerance of immune response of other organism involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of defense response of other organism involved in symbiotic interaction
subclass of: response to immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism avoids the immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: immune evasion
has_obo_namespace: biological_process
has_related_synonym: evasion or tolerance of immune response of other organism during symbiotic interaction
id: GO:0051805
in_subset: gosubset prok

evasion or tolerance of defense response of other organism involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of defenses of other organism involved in symbiotic interaction
definition: Any process, either active or passive, by which an organism avoids or tolerates the effects of a second organism's defense response; the defense response is mounted by the second organism in response to the presence of the first organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: evasion of other organism defence response
has_obo_namespace: biological_process
has_related_synonym: evasion or tolerance of defense response of other organism during symbiotic interaction
id: GO:0051807
in_subset: gosubset prok

translocation of peptides or proteins into other organism involved in symbiotic interaction
type: Class
subclass of: translocation of molecules into other organism involved in symbiotic interaction
definition: The directed movement of peptides or proteins produced by an organism to a location inside a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: translocation of peptides or proteins into other organism during symbiotic interaction
has_related_synonym: transport of peptides or proteins into other organism during symbiotic interaction
id: GO:0051808
in_subset: gosubset prok

passive evasion of immune response of other organism involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism avoids the immune response of a second organism without directly interfering with the second organism's immune system, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: passive immune evasion
has_obo_namespace: biological_process
has_related_synonym: passive evasion of immune response of other organism during symbiotic interaction
id: GO:0051809
in_subset: gosubset prok

active evasion of immune response of other organism involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism avoids the immune response of a second organism which directly affects the second organism's immune system, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active immune evasion
has_obo_namespace: biological_process
has_related_synonym: active evasion of immune response of other organism during symbiotic interaction
id: GO:0051810
in_subset: gosubset prok

active evasion of immune response of other organism via regulation of complement system of other organism involved in symbiotic interaction
type: Class
subclass of: active evasion of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism avoids the immune response of a second organism by regulating the second organism's complement system, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active immune evasion via modulation of complement system of other organism
has_exact_synonym: active immune evasion via regulation of complement system of other organism
has_obo_namespace: biological_process
has_related_synonym: active evasion of immune response of other organism via regulation of complement system of other organism during symbiotic interaction
id: GO:0051811

active evasion of immune response of other organism via regulation of cytokine network of other organism involved in symbiotic interaction
type: Class
subclass of: active evasion of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism avoids the immune response of a second organism by regulating the second organism's cytokine networks, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active immune evasion via modulation of cytokine network of other organism
has_exact_synonym: active immune evasion via regulation of cytokine network of other organism
has_obo_namespace: biological_process
has_related_synonym: active evasion of immune response of other organism via regulation of cytokine network of other organism during symbiotic interaction
id: GO:0051812

active evasion of immune response of other organism via regulation of antigen processing and presentation in other organism involved in symbiotic interaction
type: Class
subclass of: active evasion of host immune response via regulation of host antigen processing and presentation
definition: Any process in which an organism avoids the immune response of a second organism by regulating the second organism's antigen processing or presentation pathways, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active evasion of immune response of other organism via regulation of antigen processing and presentation pathway in other organism during symbiotic interaction
has_exact_synonym: active immune evasion via modulation of antigen processing and presentation in other organism
has_exact_synonym: active immune evasion via modulation of antigen processing/presentation in other organism
has_exact_synonym: active immune evasion via regulation of antigen processing and presentation in other organism
has_obo_namespace: biological_process
has_related_synonym: active evasion of immune response of other organism via regulation of antigen processing and presentation in other organism during symbiotic interaction
id: GO:0051813

modification of morphology or physiology of other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism
definition: The process in which an organism effects a change in the structure or processes of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: regulation of morphology of other organism during symbiotic interaction
has_narrow_synonym: regulation of physiological process in other organism during symbiotic interaction
has_narrow_synonym: regulation of physiology of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modification of morphology or physiology of other organism during symbiotic interaction
has_related_synonym: modulation of morphology or physiology of other organism during symbiotic interaction
has_related_synonym: regulation of morphology or physiology of other organism during symbiotic interaction
id: GO:0051817
in_subset: gosubset prok

disruption of cells of other organism involved in symbiotic interaction
type: Class
subclass of: disruption of cells of other organism
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: A process in which an organism has a negative effect on the functioning of the second organism's cells, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: disruption of cells of other organism during symbiotic interaction
id: GO:0051818
in_subset: gosubset prok

induction of tumor, nodule, or growth in other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The process in which an organism causes the formation of a mass of cells in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: induction of tumor, nodule, or growth in other organism during symbiotic interaction
id: GO:0051819
in_subset: gosubset prok

induction of tumor, nodule, or growth containing transformed cells in other organism involved in symbiotic interaction
type: Class
subclass of: induction of tumor, nodule, or growth in other organism involved in symbiotic interaction
definition: The process in which an organism causes the formation in a second organism of a growth whose cells have been transformed and continue to exist in the absence of the first organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: induction of tumor, nodule, or growth containing transformed cells in other organism during symbiotic interaction
id: GO:0051820

recognition of other organism involved in symbiotic interaction
type: Class
subclass of: detection of other organism
definition: The set of specific processes that allow an organism to detect the presence of a second organism via physical or chemical signals, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: recognition of other organism during symbiotic interaction
id: GO:0051824
in_subset: gosubset prok

adhesion to other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism process
definition: The attachment of an organism to a second organism, where the two organisms are in a symbiotic interaction. Adhesion may be via adhesion molecules, general stickiness etc., and may be either direct or indirect.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: adhesion to other organism during symbiotic interaction
id: GO:0051825
in_subset: gosubset prok

avoidance of defenses of other organism involved in symbiotic interaction
type: Class
subclass of: response to defenses of other organism involved in symbiotic interaction
definition: Any process, either constitutive or induced, by which an organism evades, minimizes, or suppresses the effects of a second organism's defense(s), where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: avoidance of defenses of other organism during symbiotic interaction
id: GO:0051832
in_subset: gosubset prok

suppression of defenses of other organism involved in symbiotic interaction
type: Class
subclass of: avoidance of defenses of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense(s) of a second organism, where the two organisms are in a symbiotic interaction. Suppression occurs by active mechanisms that normally result in the shutting down of pathways in the second organism.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: negative regulation of defenses of other organism during symbiotic interaction
has_related_synonym: suppression of defenses of other organism during symbiotic interaction
id: GO:0051833
in_subset: gosubset prok

evasion or tolerance of defenses of other organism involved in symbiotic interaction
type: Class
subclass of: avoidance of defenses of other organism involved in symbiotic interaction
definition: Any process, either active or passive, by which an organism avoids or tolerates the effects of a second organism's defense(s), where the two organisms are in a symbiotic interaction. Defenses may be induced by the presence of the organism or may be preformed (e.g. physical barriers).
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: evasion or tolerance of defenses of other organism during symbiotic interaction
id: GO:0051834
in_subset: gosubset prok

translocation of molecules into other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism transport
definition: The directed movement of a molecule(s) produced by an organism to a location inside a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: translocation of molecules into other organism during symbiotic interaction
has_related_synonym: transport of molecules into other organism during symbiotic interaction
id: GO:0051836
in_subset: gosubset prok

translocation of DNA into other organism involved in symbiotic interaction
type: Class
subclass of: translocation of molecules into other organism involved in symbiotic interaction
definition: The directed movement of DNA from an organism to a location inside a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: translocation of DNA into other organism during symbiotic interaction
has_related_synonym: transport of DNA into other organism during symbiotic interaction
id: GO:0051837

cytolysis by host of symbiont cells
type: Class
subclass of: cytolysis in other organism involved in symbiotic interaction
subclass of: killing by host of symbiont cells
definition: The killing by an organism of a cell in its symbiont organism by means of the rupture of cell membranes and the loss of cytoplasm. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051838
in_subset: gosubset prok

translocation of peptides or proteins into symbiont
type: Class
subclass of: translocation of peptides or proteins into other organism involved in symbiotic interaction
subclass of: translocation of molecules into symbiont
definition: The directed movement of peptides or proteins produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: transport of peptides or proteins into symbiont
has_obo_namespace: biological_process
id: GO:0051844
in_subset: gosubset prok

acquisition of nutrients from symbiont
type: Class
subclass of: interaction with symbiont
subclass of: multi-organism behavior
definition: The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051850
in_subset: gosubset prok

modification by host of symbiont morphology or physiology
type: Class
subclass of: interaction with symbiont
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or processes of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051851
in_subset: gosubset prok

disruption by host of symbiont cells
type: Class
subclass of: disruption of cells of other organism involved in symbiotic interaction
subclass of: modification by host of symbiont morphology or physiology
subclass of: defense response to other organism
definition: Any process in which an organism has a negative effect on the functioning of the symbiont's cells. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051852
in_subset: gosubset prok

recognition of symbiont
type: Class
subclass of: detection of symbiont
subclass of: interaction with symbiont
subclass of: recognition of other organism involved in symbiotic interaction
definition: The set of specific processes that allow an organism to detect the presence of its symbiont via physical or chemical signals. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051855
in_subset: gosubset prok

adhesion to symbiont
type: Class
subclass of: interaction with symbiont
subclass of: adhesion to other organism involved in symbiotic interaction
definition: The attachment of an organism to its symbiont via adhesion molecules, general stickiness etc., either directly or indirectly. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051856
in_subset: gosubset prok

avoidance of symbiont defenses
type: Class
subclass of: interaction with symbiont
subclass of: avoidance of defenses of other organism involved in symbiotic interaction
subclass of: response to symbiont defenses
definition: Any process, either constitutive or induced, by which an organism evades, minimizes, or suppresses the effects of its symbiont organism's defense(s). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051858
in_subset: gosubset prok

suppression of symbiont defenses
type: Class
subclass of: suppression of defenses of other organism involved in symbiotic interaction
subclass of: avoidance of symbiont defenses
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont defense(s) by active mechanisms that normally result in the shutting down of a symbiont pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051859
in_subset: gosubset prok

evasion or tolerance of symbiont defenses
type: Class
subclass of: evasion or tolerance of defenses of other organism involved in symbiotic interaction
subclass of: avoidance of symbiont defenses
definition: The process, either active or passive, by which an organism evades or tolerates the effects of the defense(s) or defense molecules of a symbiont organism. Symbiont defenses may be induced by the presence of the organism or may be preformed (e.g. physical barriers). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051860
in_subset: gosubset prok

translocation of molecules into symbiont
type: Class
subclass of: interaction with symbiont
subclass of: translocation of molecules into other organism involved in symbiotic interaction
definition: The directed movement of molecule(s) produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: transport of molecules into symbiont
has_obo_namespace: biological_process
id: GO:0051862
in_subset: gosubset prok

killing by host of symbiont cells
type: Class
subclass of: disruption by host of symbiont cells
subclass of: killing of cells in other organism involved in symbiotic interaction
definition: Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0051873
in_subset: gosubset prok

killing of cells in other organism involved in symbiotic interaction
type: Class
subclass of: killing of cells of other organism
subclass of: disruption of cells of other organism involved in symbiotic interaction
definition: Any process mediated by an organism that results in the death of cells in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: killing of cells in other organism during symbiotic interaction
id: GO:0051883
in_subset: gosubset prok

Type IV pili-dependent aggregation
type: Class
subclass of: multi-organismal cell-cell adhesion
definition: The formation of bacterial aggregates in liquid culture dependent on the presence of Type IV pili.
imported from: go.owl
has_broad_synonym: auto-aggregation
has_exact_synonym: bfp-dependent aggregation
has_exact_synonym: bundle-forming fimbriae-dependent aggregation
has_exact_synonym: bundle-forming pili-dependent aggregation
has_exact_synonym: tfp-dependent aggregation
has_obo_namespace: biological_process
id: GO:0052000
in_subset: gosubset prok

Type IV pili-dependent localized adherence to host
type: Class
subclass of: adhesion to host
definition: Attachment of bacterial clusters to the surface of the host in a type IV pili dependent manner. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052001
in_subset: gosubset prok

metabolism by symbiont of substance in host
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: metabolism of substance in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052002

negative regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
type: Class
subclass of: negative regulation by symbiont of host salicylic acid-mediated defense response
subclass of: negative regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
subclass of: negative regulation by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host salicylic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_exact_synonym: down-regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_exact_synonym: downregulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_exact_synonym: negative modulation by organism of defense-related host SA-mediated signal transduction pathway
has_exact_synonym: negative modulation by organism of defense-related host salicylic acid-mediated signal transduction pathway
has_exact_synonym: negative regulation by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: inhibition by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052003
in_subset: gosubset prok

negative regulation by symbiont of host salicylic acid-mediated defense response
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of host salicylic acid-mediated defense response
subclass of: negative regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the salicylic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host salicylic acid-mediated defense response
has_exact_synonym: down-regulation by symbiont of host salicylic acid-mediated defense response
has_exact_synonym: downregulation by symbiont of host salicylic acid-mediated defense response
has_exact_synonym: negative regulation of host SA-mediated defense response
has_exact_synonym: suppression by organism of host salicylic acid-mediated defense response
has_exact_synonym: suppression of host SA mediated defense response
has_narrow_synonym: inhibition by symbiont of host salicylic acid-mediated defense response
has_obo_namespace: biological_process
id: GO:0052004
in_subset: gosubset prok

negative regulation by symbiont of host ethylene-mediated defense response
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of host ethylene-mediated defense response
subclass of: negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host ethylene-mediated defense response
has_exact_synonym: down-regulation by symbiont of host ethylene-mediated defense response
has_exact_synonym: downregulation by symbiont of host ethylene-mediated defense response
has_exact_synonym: suppression by organism of host ethylene-mediated defense response
has_narrow_synonym: inhibition by symbiont of host ethylene-mediated defense response
has_obo_namespace: biological_process
id: GO:0052005
in_subset: gosubset prok

catabolism by symbiont of substance in host
type: Class
subclass of: metabolism by symbiont of substance in host
subclass of: catabolism of substance in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism in its host resulting in the breakdown of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of substance in host
has_obo_namespace: biological_process
id: GO:0052006

biosynthesis by symbiont of substance in host
type: Class
subclass of: metabolism by symbiont of substance in host
subclass of: biosynthesis of substance in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism in its host resulting in the formation of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: biosynthesis by organism of substance in host
has_obo_namespace: biological_process
id: GO:0052007

disruption by symbiont of host cellular component
type: Class
subclass of: modification by symbiont of host cellular component
subclass of: disruption by organism of cellular component in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism of host cellular component by organism
has_exact_synonym: catabolism of host structural constituent by organism
has_exact_synonym: degradation of host cellular component by organism
has_exact_synonym: disassembly by organism of host cellular component
has_obo_namespace: biological_process
has_related_synonym: disassembly by symbiont of host cellular component
id: GO:0052008
in_subset: gosubset prok

disruption by symbiont of host cell wall
type: Class
subclass of: disruption by symbiont of host cellular component
subclass of: modification by symbiont of host cell wall
subclass of: disruption by organism of cell wall of other organism involved in symbiotic interaction
definition: The breakdown of the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism of host cell wall by organism
has_exact_synonym: degradation of host cell wall by organism
has_exact_synonym: disassembly by organism of host cell wall
has_exact_synonym: disassembly by symbiont of host cell wall
has_obo_namespace: biological_process
id: GO:0052009
in_subset: gosubset prok

catabolism by symbiont of host cell wall cellulose
type: Class
subclass of: catabolism by symbiont of host carbohydrate
subclass of: metabolism by symbiont of host cell wall cellulose
subclass of: catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host cell wall cellulose
has_obo_namespace: biological_process
id: GO:0052010
in_subset: gosubset prok

catabolism by symbiont of host cell wall pectin
type: Class
subclass of: catabolism by symbiont of host carbohydrate
subclass of: metabolism by symbiont of host cell wall pectin
subclass of: catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host cell wall pectin
has_obo_namespace: biological_process
id: GO:0052011
in_subset: gosubset prok

catabolism by symbiont of host cell wall chitin
type: Class
subclass of: catabolism by symbiont of host carbohydrate
subclass of: metabolism by symbiont of host cell wall chitin
subclass of: catabolism by organism of cell wall chitin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host cell wall chitin
has_obo_namespace: biological_process
id: GO:0052012
in_subset: gosubset prok

catabolism by symbiont of host macromolecule
type: Class
subclass of: catabolism by symbiont of substance in host
subclass of: metabolism by symbiont of host macromolecule
subclass of: catabolism by organism of macromolecule in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host macromolecule
has_obo_namespace: biological_process
id: GO:0052013

catabolism by symbiont of host protein
type: Class
subclass of: catabolism by symbiont of host macromolecule
subclass of: metabolism by symbiont of host protein
subclass of: catabolism by organism of protein in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host protein
has_obo_namespace: biological_process
id: GO:0052014

catabolism by symbiont of host carbohydrate
type: Class
subclass of: catabolism by symbiont of host macromolecule
subclass of: metabolism by symbiont of host carbohydrate
subclass of: catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host carbohydrate
has_obo_namespace: biological_process
id: GO:0052015

catabolism by symbiont of host glucan
type: Class
subclass of: catabolism by symbiont of host carbohydrate
subclass of: metabolism by symbiont of host glucan
subclass of: catabolism by organism of glucan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host glucan
has_obo_namespace: biological_process
id: GO:0052016

catabolism by symbiont of host xylan
type: Class
subclass of: catabolism by symbiont of host carbohydrate
subclass of: metabolism by symbiont of host xylan
subclass of: catabolism by organism of xylan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by organism of host xylan
has_obo_namespace: biological_process
id: GO:0052017

modulation by symbiont of RNA levels in host
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: modulation of RNA levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of RNA in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host RNA levels
has_obo_namespace: biological_process
id: GO:0052018
in_subset: gosubset prok

modulation by symbiont of host hormone or growth regulator levels
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of hormones or growth regulators in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052019
in_subset: gosubset prok

modification by symbiont of host cell wall
type: Class
subclass of: modification by symbiont of host cellular component
subclass of: modification by organism of cell wall of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: metabolism of host cell wall by organism
has_obo_namespace: biological_process
id: GO:0052020
in_subset: gosubset prok

modulation by symbiont of ethylene levels in host
type: Class
subclass of: modulation by symbiont of host hormone or growth regulator levels
subclass of: modulation by organism of ethylene levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of ethylene in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052021
in_subset: gosubset prok

modulation by symbiont of jasmonic acid levels in host
type: Class
subclass of: modulation by symbiont of host hormone or growth regulator levels
subclass of: modulation by organism of jasmonic acid levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of jasmonic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052022
in_subset: gosubset prok

modulation by symbiont of salicylic acid levels in host
type: Class
subclass of: modulation by symbiont of host hormone or growth regulator levels
subclass of: modulation by organism of salicylic acid levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of salicylic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052023
in_subset: gosubset prok

positive regulation by symbiont of hormone or growth regulator levels in host
type: Class
subclass of: modulation by symbiont of host hormone or growth regulator levels
subclass of: positive regulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
definition: The increase by an organism of the levels of hormones or growth regulators in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive modulation of hormone or growth regulator levels in host
has_exact_synonym: up regulation by symbiont of hormone or growth regulator levels in host
has_exact_synonym: up-regulation by symbiont of hormone or growth regulator levels in host
has_exact_synonym: upregulation by symbiont of hormone or growth regulator levels in host
has_narrow_synonym: activation by symbiont of hormone or growth regulator levels in host
has_narrow_synonym: stimulation by symbiont of hormone or growth regulator levels in host
has_obo_namespace: biological_process
id: GO:0052024
in_subset: gosubset prok

modification by symbiont of host cell membrane
type: Class
subclass of: modification by symbiont of host cellular component
subclass of: modification by organism of membrane in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a host cellular membrane. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: modification by symbiont of host cell membrane
has_obo_namespace: biological_process
id: GO:0052025
in_subset: gosubset prok

modulation by symbiont of host transcription
type: Class
subclass of: modulation by symbiont of host cellular process
subclass of: modulation of transcription in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of its host's transcription. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052026
in_subset: gosubset prok

modulation by symbiont of host signal transduction pathway
type: Class
subclass of: modulation by symbiont of host cellular process
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the host signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of host signal transduction by symbiont
has_exact_synonym: regulation by symbiont of host signal transduction pathway
has_obo_namespace: biological_process
has_related_synonym: modulation by symbiont of host signal transduction
id: GO:0052027
in_subset: gosubset prok

positive regulation by symbiont of host signal transduction pathway
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
subclass of: positive regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the host signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of host signal transduction pathway
has_exact_synonym: up-regulation by symbiont of host signal transduction pathway
has_exact_synonym: upregulation by symbiont of host signal transduction pathway
has_narrow_synonym: activation by symbiont of host signal transduction pathway
has_narrow_synonym: stimulation by symbiont of host signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052028
in_subset: gosubset prok

negative regulation by symbiont of host signal transduction pathway
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
subclass of: negative regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the host signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host signal transduction pathway
has_exact_synonym: down-regulation by symbiont of host signal transduction pathway
has_exact_synonym: downregulation by symbiont of host signal transduction pathway
has_exact_synonym: negative modulation by organism of host signal transduction pathway
has_narrow_synonym: inhibition by symbiont of host signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052029
in_subset: gosubset prok

modulation by symbiont of host defense response
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: response to host defenses
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the defense response of its host, the response mounted by the host in response to the presence of the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052031
in_subset: gosubset prok

modulation by symbiont of host inflammatory response
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of inflammatory response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052032
in_subset: gosubset prok

pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
type: Class
subclass of: positive regulation by symbiont of host innate immune response
subclass of: pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response
subclass of: pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction
definition: Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: MAMP dependent activation of host innate immunity
has_exact_synonym: MAMP dependent induction of host innate immunity
has_exact_synonym: PAMP dependent activation of host innate immunity
has_exact_synonym: PAMP dependent induction of host innate immunity
has_exact_synonym: general elicitor-dependent activation of host innate immunity
has_exact_synonym: general elicitor-dependent induction of host innate immunity
has_exact_synonym: pathogen-associated molecular pattern dependent activation by organism of host innate immunity
has_exact_synonym: pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity
has_obo_namespace: biological_process
id: GO:0052033
in_subset: gosubset prok

negative regulation by symbiont of microbe-associated molecular pattern-induced host innate immune response
type: Class
subclass of: modulation by symbiont of microbe-associated molecular pattern-induced host innate immune response
subclass of: negative regulation by symbiont of host innate immune response
subclass of: negative regulation by organism of pathogen-associated molecular pattern-induced innate immune response of other organism involved in symbiotic interaction
definition: Any process that involves recognition of a microbe-associated molecular pattern, and by which an organism tops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity
has_exact_synonym: down-regulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity
has_exact_synonym: downregulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity
has_exact_synonym: negative regulation by symbiont of microbe-associated molecular pattern-induced host innate immunity
has_exact_synonym: suppression of MAMP induced host innate immunity
has_exact_synonym: suppression of MAMP-induced host innate immunity
has_exact_synonym: suppression of PAMP induced host innate immunity
has_exact_synonym: suppression of PAMP-induced host innate immunity
has_exact_synonym: suppression of general elicitor induced host innate immunity
has_exact_synonym: suppression of general elicitor-induced host innate immunity
has_exact_synonym: suppression of pathogen-associated molecular pattern-induced host innate immunity
has_narrow_synonym: inhibition by symbiont of pathogen-associated molecular pattern-induced host innate immunity
has_obo_namespace: biological_process
id: GO:0052034
in_subset: gosubset prok

positive regulation by symbiont of host inflammatory response
type: Class
subclass of: modulation by symbiont of host inflammatory response
subclass of: positive regulation by organism of inflammatory response of other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of host inflammatory response
has_exact_synonym: up-regulation by symbiont of host inflammatory response
has_exact_synonym: upregulation by symbiont of host inflammatory response
has_narrow_synonym: activation by symbiont of host inflammatory response
has_narrow_synonym: stimulation by symbiont of host inflammatory response
has_obo_namespace: biological_process
id: GO:0052035
in_subset: gosubset prok

negative regulation by symbiont of host inflammatory response
type: Class
subclass of: modulation by symbiont of host inflammatory response
subclass of: negative regulation by symbiont of host defense response
subclass of: negative regulation by organism of inflammatory response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host inflammatory response
has_exact_synonym: down-regulation by symbiont of host inflammatory response
has_exact_synonym: downregulation by symbiont of host inflammatory response
has_narrow_synonym: inhibition by symbiont of host inflammatory response
has_obo_namespace: biological_process
id: GO:0052036
in_subset: gosubset prok

negative regulation by symbiont of host defense response
type: Class
subclass of: suppression of host defenses
subclass of: modulation by symbiont of host defense response
subclass of: suppression of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host defense response
has_exact_synonym: down-regulation by symbiont of host defense response
has_exact_synonym: downregulation by symbiont of host defense response
has_exact_synonym: suppression of host defense response
has_narrow_synonym: inhibition by symbiont of host defense response
has_obo_namespace: biological_process
id: GO:0052037
in_subset: gosubset prok

modulation by symbiont of host intracellular transport
type: Class
subclass of: modulation by symbiont of host cellular process
subclass of: modulation of intracellular transport in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of host intracellular trafficking
has_obo_namespace: biological_process
id: GO:0052038
in_subset: gosubset prok

modification by symbiont of host cytoskeleton
type: Class
subclass of: modification by symbiont of host cellular component
subclass of: modification by organism of cytoskeleton of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of the host cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052039
in_subset: gosubset prok

modulation by symbiont of host programmed cell death
type: Class
subclass of: modulation by symbiont of host cellular process
subclass of: modulation of programmed cell death in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_alternative_id: GO:0052152
has_exact_synonym: modulation of host PCD
has_narrow_synonym: modulation by symbiont of host non-apoptotic programmed cell death
has_obo_namespace: biological_process
id: GO:0052040
in_subset: gosubset prok

negative regulation by symbiont of host programmed cell death
type: Class
subclass of: modulation by symbiont of host programmed cell death
subclass of: negative regulation by organism of programmed cell death in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host programmed cell death
has_exact_synonym: down-regulation by symbiont of host programmed cell death
has_exact_synonym: downregulation by symbiont of host programmed cell death
has_exact_synonym: inhibition of host programmed cell death
has_exact_synonym: suppression by symbiont of host PCD
has_exact_synonym: suppression by symbiont of host programmed cell death
has_narrow_synonym: inhibition by symbiont of host programmed cell death
has_obo_namespace: biological_process
id: GO:0052041
in_subset: gosubset prok

positive regulation by symbiont of host programmed cell death
type: Class
subclass of: modulation by symbiont of host programmed cell death
subclass of: positive regulation by organism of programmed cell death in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_alternative_id: GO:0012504
has_alternative_id: GO:0052044
has_alternative_id: GO:0052045
has_alternative_id: GO:0052153
has_alternative_id: GO:0052397
has_alternative_id: GO:0052400
has_exact_synonym: activation by organism of host programmed cell death
has_exact_synonym: activation by organism of programmed cell death in other organism during symbiotic interaction
has_exact_synonym: enhancement of host programmed cell death
has_exact_synonym: enhancement of host programmed cell death by organism
has_exact_synonym: induction by organism of programmed cell death in other organism involved in symbiotic interaction
has_exact_synonym: induction by symbiont of host programmed cell death
has_exact_synonym: upregulation by symbiont of host programmed cell death
has_narrow_synonym: activation by organism of non-apoptotic programmed cell death in other organism
has_narrow_synonym: activation by symbiont of host programmed cell death
has_narrow_synonym: induction by organism of non-apoptotic programmed cell death in other organism during symbiotic interaction
has_narrow_synonym: positive regulation by symbiont of host non-apoptotic programmed cell death
has_narrow_synonym: stimulation by symbiont of host programmed cell death
has_obo_namespace: biological_process
has_related_synonym: induction by organism of programmed cell death in other organism during symbiotic interaction
has_related_synonym: induction of non-apoptotic programmed cell death by other organism
id: GO:0052042
in_subset: gosubset prok

modification by symbiont of host cellular component
type: Class
subclass of: modification by symbiont of host structure
subclass of: modification of cellular component in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a host cellular component. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052043
in_subset: gosubset prok

modification by symbiont of host morphology or physiology via secreted substance
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: interaction with host via secreted substance involved in symbiotic interaction
subclass of: modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by one of the organisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: modification of host morphology or physiology via effector molecule
has_narrow_synonym: modification of host morphology or physiology via ellicitor
has_obo_namespace: biological_process
id: GO:0052046
in_subset: gosubset prok

interaction with other organism via secreted substance involved in symbiotic interaction
type: Class
subclass of: interspecies interaction between organisms
definition: An interaction with a second organism mediated by a substance secreted by the first organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: interaction with other organism via secreted substance during symbiotic interaction
id: GO:0052047
in_subset: gosubset prok

interaction with host via secreted substance involved in symbiotic interaction
type: Class
subclass of: interaction with host via substance released outside of symbiont
subclass of: interaction with other organism via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: interaction with host via secreted substance during symbiotic interaction
id: GO:0052048
in_subset: gosubset prok

interaction with host via protein secreted by type III secretion system
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
subclass of: interaction with other organism via protein secreted by type III secretion system involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type III secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052049
in_subset: gosubset prok

interaction with host via substance secreted by type IV secretion system
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
subclass of: interaction with other organism via substance secreted by type IV secretion system involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the other organism by a type IV secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052050
in_subset: gosubset prok

interaction with host via protein secreted by type II secretion system
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
subclass of: interaction with other organism via protein secreted by type II secretion system involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the other organism by a type II secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052051
in_subset: gosubset prok

modification by symbiont of host morphology or physiology via protein secreted by type II secretion system
type: Class
subclass of: modification by symbiont of host morphology or physiology via secreted substance
subclass of: interaction with host via protein secreted by type II secretion system
subclass of: modification of morphology or physiology of other organism via protein secreted by type II secretion system involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type II secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052052
in_subset: gosubset prok

negative regulation by symbiont of host catalytic activity
type: Class
subclass of: negative regulation by symbiont of host molecular function
subclass of: modulation by symbiont of host catalytic activity
subclass of: negative regulation of catalytic activity in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host enzyme activity
has_exact_synonym: down-regulation by symbiont of host enzyme activity
has_exact_synonym: downregulation by symbiont of host enzyme activity
has_exact_synonym: inhibition of host enzyme activity
has_exact_synonym: negative regulation by symbiont of host enzyme activity
has_narrow_synonym: inhibition by symbiont of host enzyme activity
has_obo_namespace: biological_process
id: GO:0052053
in_subset: gosubset prok

negative regulation by symbiont of host peptidase activity
type: Class
subclass of: negative regulation by symbiont of host catalytic activity
subclass of: modulation by symbiont of host peptidase activity
subclass of: negative regulation of peptidase activity in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host protease activity
has_exact_synonym: down-regulation by symbiont of host protease activity
has_exact_synonym: downregulation by symbiont of host protease activity
has_exact_synonym: inhibition of host protease activity
has_exact_synonym: negative regulation by symbiont of host protease activity
has_narrow_synonym: inhibition by symbiont of host protease activity
has_obo_namespace: biological_process
id: GO:0052054
in_subset: gosubset prok

modulation by symbiont of host molecular function
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: modulation of molecular function in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the function of a host protein via a direct interaction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modification by symbiont of host molecular function
has_exact_synonym: modification by symbiont of host protein function
has_obo_namespace: biological_process
id: GO:0052055
in_subset: gosubset prok

negative regulation by symbiont of host molecular function
type: Class
subclass of: modulation by symbiont of host molecular function
subclass of: negative regulation of molecular function in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the functional activity of host proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host protein function
has_exact_synonym: down-regulation by symbiont of host protein function
has_exact_synonym: downregulation by symbiont of host protein function
has_exact_synonym: inhibition of host protein function
has_exact_synonym: negative regulation by symbiont of host protein function
has_narrow_synonym: inhibition by symbiont of host protein function
has_obo_namespace: biological_process
id: GO:0052056
in_subset: gosubset prok

modification by symbiont of host morphology or physiology via protein secreted by type III secretion system
type: Class
subclass of: modification by symbiont of host morphology or physiology via secreted substance
subclass of: interaction with host via protein secreted by type III secretion system
subclass of: modification of morphology or physiology of other organism via protein secreted by type III secretion system involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type III secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052057
in_subset: gosubset prok

modification by symbiont of host morphology or physiology via substance secreted by type IV secretion system
type: Class
subclass of: modification by symbiont of host morphology or physiology via secreted substance
subclass of: interaction with host via substance secreted by type IV secretion system
subclass of: modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type IV secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052058
in_subset: gosubset prok

evasion or tolerance by symbiont of host-produced reactive oxygen species
type: Class
subclass of: evasion or tolerance of host immune response
subclass of: evasion or tolerance by organism of reactive oxygen species produced by other organism involved in symbiotic interaction
subclass of: response to defense-related host reactive oxygen species production
definition: The process in which an organism avoids the effects of reactive oxygen species produced as a defense response by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: evasion or tolerance by organism of host-produced reactive oxygen species
has_exact_synonym: evasion or tolerance by organism of reactive oxygen species produced during host defense response
has_exact_synonym: evasion or tolerance of defense-related host metabolic burst
has_exact_synonym: evasion or tolerance of defense-related host oxidative burst
has_exact_synonym: evasion or tolerance of defense-related host respiratory burst
has_exact_synonym: evasion or tolerance of host-produced AOS
has_exact_synonym: evasion or tolerance of host-produced ROIs
has_exact_synonym: evasion or tolerance of host-produced ROS
has_exact_synonym: evasion or tolerance of host-produced active oxygen species
has_exact_synonym: evasion or tolerance of host-produced reactive oxygen intermediates
has_exact_synonym: evasion or tolerance of reactive oxygen species produced by host in response to organism
has_narrow_synonym: evasion by organism of cellular damage caused by host oxidative burst
has_obo_namespace: biological_process
id: GO:0052059

evasion or tolerance by symbiont of host-produced nitric oxide
type: Class
subclass of: evasion or tolerance of host immune response
subclass of: evasion or tolerance by organism of nitric oxide produced by other organism involved in symbiotic interaction
subclass of: response to defense-related host nitric oxide production
definition: The process in which an organism avoids the effects of nitric oxide produced as a defense response by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: evasion or tolerance by organism of host NO
has_exact_synonym: evasion or tolerance by organism of host nitric oxide
has_exact_synonym: evasion or tolerance by organism of host-produced NO
has_exact_synonym: evasion or tolerance by organism of host-produced nitric oxide
has_exact_synonym: evasion or tolerance of NO produced by host in response to organism
has_exact_synonym: evasion or tolerance of nitric oxide produced by host in response to organism
has_obo_namespace: biological_process
id: GO:0052060

evasion or tolerance by symbiont of host-produced phytoalexins
type: Class
subclass of: evasion or tolerance of host immune response
subclass of: evasion or tolerance by organism of phytoalexins produced by other organism involved in symbiotic interaction
subclass of: response to host phytoalexin production
definition: The process in which an organism avoids the effects of phytoalexins produced as a defense response by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: evasion or tolerance by organism of host phytoalexins
has_exact_synonym: evasion or tolerance by organism of host-produced phytoalexins
has_exact_synonym: evasion or tolerance of phytoalexins produced by host in response to organism
has_narrow_synonym: host phytoalexin detoxification
has_obo_namespace: biological_process
id: GO:0052061

induction by symbiont of host phytoalexin production
type: Class
subclass of: induction by organism of phytoalexin production in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host phytoalexin production
subclass of: induction by symbiont of host immune response
definition: The activation by an organism of the production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of host phytoalexin production
has_obo_namespace: biological_process
id: GO:0052062
in_subset: gosubset prok

induction by symbiont of defense-related host nitric oxide production
type: Class
subclass of: induction by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of defense-related host nitric oxide production
subclass of: positive regulation by symbiont of host defense response
subclass of: induction by symbiont of host immune response
definition: The activation by an organism of the production of nitric oxide as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of defense-related host NO production
has_exact_synonym: activation by organism of defense-related host nitric oxide production
has_exact_synonym: induction by organism of defense-related host NO production
has_obo_namespace: biological_process
id: GO:0052063
in_subset: gosubset prok

induction by symbiont of defense-related host reactive oxygen species production
type: Class
subclass of: induction by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of defense-related host reactive oxygen species production
subclass of: induction by symbiont of host immune response
definition: The activation by an organism of the production of reactive oxygen species as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of defense-related host AOS production
has_exact_synonym: activation by organism of defense-related host ROI production
has_exact_synonym: activation by organism of defense-related host ROS production
has_exact_synonym: activation by organism of defense-related host active oxygen species production
has_exact_synonym: activation by organism of defense-related host metabolic burst
has_exact_synonym: activation by organism of defense-related host oxidative burst
has_exact_synonym: activation by organism of defense-related host reactive oxidative species production
has_exact_synonym: activation by organism of defense-related host reactive oxygen intermediate production
has_exact_synonym: activation by organism of defense-related host reactive oxygen species production
has_exact_synonym: activation by organism of defense-related host respiratory burst
has_exact_synonym: induction by organism of defense-related host AOS production
has_exact_synonym: induction by organism of defense-related host ROI production
has_exact_synonym: induction by organism of defense-related host ROS production
has_exact_synonym: induction by organism of defense-related host active oxygen species production
has_exact_synonym: induction by organism of defense-related host metabolic burst
has_exact_synonym: induction by organism of defense-related host oxidative burst
has_exact_synonym: induction by organism of defense-related host reactive oxidative species production
has_exact_synonym: induction by organism of defense-related host reactive oxygen intermediate production
has_exact_synonym: induction by organism of defense-related host respiratory burst
has_obo_namespace: biological_process
id: GO:0052064
in_subset: gosubset prok

positive regulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related Ca2+ flux in other organism during symbiotic interaction
has_related_synonym: positive regulation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
id: GO:0052065
in_subset: gosubset prok

entry of symbiont into host cell by promotion of host phagocytosis
type: Class
subclass of: entry into host cell
subclass of: positive regulation by symbiont of host phagocytosis
subclass of: entry of organism into cell of other organism by promotion of phagocytosis in other organism involved in symbiotic interaction
definition: The invasion by an organism of a cell of its host organism by utilizing the host phagocytosis mechanism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: entry of organism into host cell by promotion of host phagocytosis
has_obo_namespace: biological_process
id: GO:0052066

negative regulation by symbiont of entry into host cell via phagocytosis
type: Class
subclass of: evasion or tolerance of host defenses
subclass of: negative regulation by organism of entry into cell of other organism via phagocytosis involved in symbiotic interaction
definition: Any process in which an organism stops or prevents itself undergoing phagocytosis into a cell in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of entry into host cell via phagocytosis
has_exact_synonym: down-regulation by symbiont of entry into host cell via phagocytosis
has_exact_synonym: downregulation by symbiont of entry into host cell via phagocytosis
has_exact_synonym: negative regulation by organism of entry into host cell via host phagocytosis
has_narrow_synonym: inhibition by symbiont of entry into host cell via phagocytosis
has_obo_namespace: biological_process
id: GO:0052067

negative regulation by symbiont of host jasmonic acid-mediated defense response
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of host jasmonic acid-mediated defense response
subclass of: negative regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: negative regulation by symbiont of host immune response
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the jasmonic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host jasmonic acid-mediated defense response
has_exact_synonym: down-regulation by symbiont of host jasmonic acid-mediated defense response
has_exact_synonym: downregulation by symbiont of host jasmonic acid-mediated defense response
has_exact_synonym: suppression by organism of host JA-mediated defense response
has_narrow_synonym: inhibition by symbiont of host jasmonic acid-mediated defense response
has_obo_namespace: biological_process
id: GO:0052068
in_subset: gosubset prok

negative regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
type: Class
subclass of: negative regulation by symbiont of host signal transduction pathway
subclass of: negative regulation by symbiont of host jasmonic acid-mediated defense response
subclass of: modulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
subclass of: negative regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host jasmonic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_exact_synonym: down-regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_exact_synonym: downregulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_exact_synonym: negative regulation by organism of defense-related host JA-mediated signal transduction pathway
has_narrow_synonym: inhibition by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052069
in_subset: gosubset prok

negative regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
type: Class
subclass of: negative regulation by symbiont of host ethylene-mediated defense response
subclass of: negative regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
subclass of: negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host ethylene-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_exact_synonym: down-regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_exact_synonym: downregulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_exact_synonym: suppression by organism of defense-related host ethylene-mediated signal transduction pathway
has_narrow_synonym: inhibition by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052070
in_subset: gosubset prok

positive regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
type: Class
subclass of: positive regulation by symbiont of host signal transduction pathway
subclass of: positive regulation by symbiont of host ethylene-mediated defense response
subclass of: modulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
subclass of: positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of host ethylene-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_exact_synonym: up-regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_exact_synonym: upregulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_narrow_synonym: activation by organism of defense-related host ethylene-mediated signal transduction pathway
has_narrow_synonym: activation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_narrow_synonym: induction by organism of defense-related host ethylene-mediated signal transduction pathway
has_narrow_synonym: stimulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
has_narrow_synonym: upregulation by organism of defense-related host ethylene-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052071
in_subset: gosubset prok

positive regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
type: Class
subclass of: positive regulation by symbiont of host signal transduction pathway
subclass of: positive regulation by symbiont of host salicylic acid-mediated defense response
subclass of: modulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
subclass of: positive regulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of host salicylic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_exact_synonym: up-regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_exact_synonym: upregulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_narrow_synonym: activation by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: activation by organism of defense-related host salicylic acid-mediated signal transduction pathway
has_narrow_synonym: activation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_narrow_synonym: induction by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: induction by organism of defense-related host salicylic acid-mediated signal transduction pathway
has_narrow_synonym: positive regulation by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: stimulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
has_narrow_synonym: upregulation by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: upregulation by organism of defense-related host salicylic acid-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052072
in_subset: gosubset prok

positive regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
type: Class
subclass of: positive regulation by symbiont of host signal transduction pathway
subclass of: positive regulation by symbiont of host jasmonic acid-mediated defense response
subclass of: modulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
subclass of: positive regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of host jasmonic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related host SA-mediated signal transduction pathway
has_exact_synonym: up regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_exact_synonym: up-regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_exact_synonym: upregulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_narrow_synonym: activation by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: activation by organism of defense-related host jasmonic acid-mediated signal transduction pathway
has_narrow_synonym: activation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_narrow_synonym: induction by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: induction by organism of defense-related host jasmonic acid-mediated signal transduction pathway
has_narrow_synonym: stimulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
has_narrow_synonym: upregulation by organism of defense-related host SA-mediated signal transduction pathway
has_narrow_synonym: upregulation by organism of defense-related host jasmonic acid-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052073
in_subset: gosubset prok

positive regulation by symbiont of host salicylic acid-mediated defense response
type: Class
subclass of: modulation by symbiont of host salicylic acid-mediated defense response
subclass of: positive regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the salicylic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of host SA-mediated defense response
has_exact_synonym: up regulation by symbiont of host salicylic acid-mediated defense response
has_exact_synonym: up-regulation by symbiont of host salicylic acid-mediated defense response
has_exact_synonym: upregulation by symbiont of host salicylic acid-mediated defense response
has_narrow_synonym: activation by symbiont of host salicylic acid-mediated defense response
has_narrow_synonym: induction by organism of host SA-mediated defense response
has_narrow_synonym: induction by organism of host salicylic acid-mediated defense response
has_narrow_synonym: stimulation by symbiont of host salicylic acid-mediated defense response
has_obo_namespace: biological_process
id: GO:0052074
in_subset: gosubset prok

positive regulation by symbiont of host jasmonic acid-mediated defense response
type: Class
subclass of: modulation by symbiont of host jasmonic acid-mediated defense response
subclass of: positive regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of host JA-mediated defense response
has_exact_synonym: up regulation by symbiont of host jasmonic acid-mediated defense response
has_exact_synonym: up-regulation by symbiont of host jasmonic acid-mediated defense response
has_exact_synonym: upregulation by symbiont of host jasmonic acid-mediated defense response
has_narrow_synonym: activation by symbiont of host jasmonic acid-mediated defense response
has_narrow_synonym: induction by organism of host JA-mediated defense response
has_narrow_synonym: induction by organism of host jasmonic acid-mediated defense response
has_narrow_synonym: stimulation by symbiont of host jasmonic acid-mediated defense response
has_obo_namespace: biological_process
id: GO:0052075
in_subset: gosubset prok

positive regulation by symbiont of host ethylene-mediated defense response
type: Class
subclass of: modulation by symbiont of host ethylene-mediated defense response
subclass of: positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of host ethylene-mediated defense response
has_exact_synonym: up-regulation by symbiont of host ethylene-mediated defense response
has_exact_synonym: upregulation by symbiont of host ethylene-mediated defense response
has_narrow_synonym: activation by organism of host ethylene-mediated defense response
has_narrow_synonym: activation by symbiont of host ethylene-mediated defense response
has_narrow_synonym: induction by organism of host ethylene-mediated defense response
has_narrow_synonym: stimulation by symbiont of host ethylene-mediated defense response
has_narrow_synonym: upregulation by organism of host ethylene-mediated defense response
has_obo_namespace: biological_process
id: GO:0052076
in_subset: gosubset prok

modulation by symbiont of defense-related host ethylene-mediated signal transduction pathway
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of host ethylene-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052077
in_subset: gosubset prok

negative regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
subclass of: negative regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: negative regulation by symbiont of host protein kinase-mediated signal transduction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host MAP kinase-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_exact_synonym: down-regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_exact_synonym: downregulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_exact_synonym: negative regulation by organism of defense-related host MAPK-mediated signal transduction pathway
has_exact_synonym: negative regulation by organism of defense-related host mitogen-activated protein kinase-mediated signal transduction pathway
has_exact_synonym: suppression by organism of defense-related host MAP kinase-mediated signal transduction pathway
has_narrow_synonym: inhibition by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052078
in_subset: gosubset prok

positive regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
type: Class
subclass of: modulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
subclass of: positive regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
subclass of: positive regulation by symbiont of host protein kinase-mediated signal transduction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of host MAP kinase-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related host MAPK-mediated signal transduction pathway
has_exact_synonym: positive regulation by organism of defense-related host mitogen-activated protein kinase-mediated signal transduction pathway
has_exact_synonym: up regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_exact_synonym: up-regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_exact_synonym: upregulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_narrow_synonym: activation by organism of defense-related host MAP kinase-mediated signal transduction pathway
has_narrow_synonym: activation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_narrow_synonym: induction by organism of defense-related host MAP kinase-mediated signal transduction pathway
has_narrow_synonym: stimulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
has_narrow_synonym: upregulation by organism of defense-related host MAP kinase-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052079
in_subset: gosubset prok

modulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host protein kinase-mediated signal transduction
definition: Any process in which an organism modulates the frequency, rate or extent of host MAP kinase-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of defense-related host MAPK-mediated signal transduction pathway by organism
has_exact_synonym: modulation of defense-related host mitogen activated protein kinase-mediated signal transduction pathway by organism
has_obo_namespace: biological_process
id: GO:0052080
in_subset: gosubset prok

modulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of host salicylic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of defense-related host SA-mediated signal transduction pathway by organism
has_obo_namespace: biological_process
id: GO:0052081
in_subset: gosubset prok

modulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of host jasmonic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of defense-related host JA-mediated signal transduction pathway by organism
has_obo_namespace: biological_process
id: GO:0052082
in_subset: gosubset prok

negative regulation by symbiont of host cell-mediated immune response
type: Class
subclass of: modulation by symbiont of host cell-mediated immune response
subclass of: negative regulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction
subclass of: negative regulation by symbiont of host immune response
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host cell-mediated immune response
has_exact_synonym: down-regulation by symbiont of host cell-mediated immune response
has_exact_synonym: downregulation by symbiont of host cell-mediated immune response
has_exact_synonym: negative regulation by organism of host cell-based immune response
has_narrow_synonym: inhibition by symbiont of host cell-mediated immune response
has_obo_namespace: biological_process
id: GO:0052083
in_subset: gosubset prok

modulation by symbiont of host ethylene-mediated defense response
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052084
in_subset: gosubset prok

negative regulation by symbiont of host T-cell mediated immune response
type: Class
subclass of: negative regulation by symbiont of host cell-mediated immune response
subclass of: modulation by symbiont of host T-cell mediated immune response
subclass of: negative regulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host T-cell mediated immune response
has_exact_synonym: down-regulation by symbiont of host T-cell mediated immune response
has_exact_synonym: downregulation by symbiont of host T-cell mediated immune response
has_narrow_synonym: inhibition by symbiont of host T-cell mediated immune response
has_obo_namespace: biological_process
id: GO:0052085
in_subset: gosubset prok

negative regulation by symbiont of host B-cell mediated immune response
type: Class
subclass of: negative regulation by symbiont of host cell-mediated immune response
subclass of: modulation by symbiont of host B-cell mediated immune response
subclass of: negative regulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the B-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host B-cell mediated immune response
has_exact_synonym: down-regulation by symbiont of host B-cell mediated immune response
has_exact_synonym: downregulation by symbiont of host B-cell mediated immune response
has_narrow_synonym: inhibition by symbiont of host B-cell mediated immune response
has_obo_namespace: biological_process
id: GO:0052086
in_subset: gosubset prok

negative regulation by symbiont of defense-related host callose deposition
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of defense-related host callose deposition
subclass of: negative regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of callose deposition performed by the host as part of its defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of defense-related host callose deposition
has_exact_synonym: down-regulation by symbiont of defense-related host callose deposition
has_exact_synonym: downregulation by symbiont of defense-related host callose deposition
has_exact_synonym: suppression by organism of defense-related host callose deposition
has_narrow_synonym: inhibition by symbiont of defense-related host callose deposition
has_obo_namespace: biological_process
id: GO:0052087
in_subset: gosubset prok

modulation by symbiont of host jasmonic acid-mediated defense response
type: Class
subclass of: modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of the jasmonic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of host JA-mediated defense response
has_obo_namespace: biological_process
id: GO:0052088
in_subset: gosubset prok

modulation by symbiont of host salicylic acid-mediated defense response
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the salicylic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of host SA-mediated defense response
has_obo_namespace: biological_process
id: GO:0052089
in_subset: gosubset prok

modulation by symbiont of defense-related host callose deposition
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of callose deposition by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052090
in_subset: gosubset prok

modulation by symbiont of nutrient release from host
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: modulation of nutrient release from other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052091
in_subset: gosubset prok

positive regulation by symbiont of nutrient release from host
type: Class
subclass of: modulation by symbiont of nutrient release from host
subclass of: positive regulation by organism of nutrient release from other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: promotion of nutrient release from host
has_exact_synonym: up regulation by symbiont of nutrient release from host
has_exact_synonym: up-regulation by symbiont of nutrient release from host
has_exact_synonym: upregulation by symbiont of nutrient release from host
has_narrow_synonym: activation by symbiont of nutrient release from host
has_narrow_synonym: stimulation by symbiont of nutrient release from host
has_obo_namespace: biological_process
id: GO:0052092
in_subset: gosubset prok

formation of specialized structure for nutrient acquisition from host
type: Class
subclass of: development of symbiont involved in interaction with host
subclass of: formation of specialized structure for nutrient acquisition from other organism involved in symbiotic interaction
definition: The assembly by an organism of a cellular component or anatomical structure for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: formation by organism of specialized structure for nutrient acquisition from host
has_exact_synonym: formation by symbiont of specialized structure for nutrient acquisition from host
has_obo_namespace: biological_process
id: GO:0052093

formation by symbiont of haustorium for nutrient acquisition from host
type: Class
subclass of: development of symbiont in host cell
subclass of: formation of specialized structure for nutrient acquisition from host
definition: The assembly by an organism of a haustorium, a projection from a cell or tissue that penetrates the host's tissues for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: formation by organism of haustoria for nutrient acquisition from host
has_exact_synonym: formation by organism of haustorium for nutrient acquisition from host
has_obo_namespace: biological_process
id: GO:0052094

formation of specialized structure for nutrient acquisition from other organism involved in symbiotic interaction
type: Class
subclass of: development involved in symbiotic interaction
definition: The assembly by an organism of a cellular component or anatomical structure for the purpose of obtaining nutrients from a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: formation of specialized structure for nutrient acquisition from other organism during symbiotic interaction
id: GO:0052095

formation by symbiont of syncytium involving giant cell for nutrient acquisition from host
type: Class
subclass of: formation of specialized structure for nutrient acquisition from host
definition: The assembly by an organism of a syncytium, a nematode-induced multi-nucleate and physiologically active aggregation of fused root cells which exclusively provides the nematode with nourishment during its sedentary life, for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: formation by organism of syncytium involving giant cell for nutrient acquisition from host
has_obo_namespace: biological_process
id: GO:0052096

interspecies quorum sensing
type: Class
subclass of: quorum sensing
subclass of: interspecies interaction between organisms
definition: The process in which a community of single-celled organisms of different species monitors population density by detecting the concentration of small diffusible signal molecules.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052097
in_subset: gosubset prok

formation by host of specialized structure for nutrient acquisition from symbiont
type: Class
subclass of: formation of specialized structure for nutrient acquisition from other organism involved in symbiotic interaction
definition: The assembly by an organism of a cellular component or anatomical structure for the purpose of obtaining nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052098

acquisition by symbiont of nutrients from host via siderophores
type: Class
subclass of: acquisition of nutrients from host
definition: The process that begins with the production and formation of siderophores in an organism that are required for the acquisition and utilization of nutrients from its host organism, and the ends with the acquirement of the nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: acquisition by organism of nutrients from host via siderophores
has_obo_namespace: biological_process
id: GO:0052099

intraspecies quorum sensing
type: Class
subclass of: quorum sensing
subclass of: intraspecies interaction between organisms
definition: The process in which single-celled organisms of the same species monitor population density by detecting the concentration of small, diffusible signal molecules.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052100
in_subset: gosubset prok

induction by symbiont of host resistance gene-dependent defense response
type: Class
subclass of: induction by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host resistance gene-dependent defense response
subclass of: induction by symbiont of host immune response
definition: The activation by an organism of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of defense response in host by specific elicitors
has_exact_synonym: activation by organism of host gene-for-gene resistance
has_exact_synonym: activation by organism of host resistance gene-dependent defense response
has_exact_synonym: activation by organism of pathogen-race/host plant cultivar-specific resistance in host
has_exact_synonym: induction by organism of defense response in host by specific elicitors
has_exact_synonym: induction by organism of host gene-for-gene resistance
has_exact_synonym: induction by organism of pathogen-race/host plant cultivar-specific resistance in host
has_obo_namespace: biological_process
id: GO:0052101
in_subset: gosubset prok

positive regulation by symbiont of defense-related host calcium-dependent protein kinase pathway
type: Class
subclass of: modulation by symbiont of defense-related host calcium-dependent protein kinase pathway
subclass of: positive regulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the host calcium-dependent protein kinase pathway during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of defense-related host CDPK pathway by organism
has_exact_synonym: up regulation by symbiont of defense-related host calcium-dependent protein kinase pathway
has_exact_synonym: up-regulation by symbiont of defense-related host calcium-dependent protein kinase pathway
has_exact_synonym: upregulation by symbiont of defense-related host calcium-dependent protein kinase pathway
has_narrow_synonym: activation by symbiont of defense-related host calcium-dependent protein kinase pathway
has_narrow_synonym: stimulation by symbiont of defense-related host calcium-dependent protein kinase pathway
has_obo_namespace: biological_process
id: GO:0052102
in_subset: gosubset prok

induction by symbiont of host induced systemic resistance
type: Class
subclass of: induction by organism of induced systemic resistance in other organism involved in symbiotic interaction
subclass of: induction by symbiont of host innate immune response
subclass of: positive regulation by symbiont of host induced systemic resistance
definition: Any process in which an organism activates induced systemic resistance in the host; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of ISR in host
has_exact_synonym: activation by organism of induced systemic resistance in host
has_exact_synonym: induction by organism of ISR in host
has_exact_synonym: induction by symbiont of induced systemic resistance in host
has_obo_namespace: biological_process
id: GO:0052103
in_subset: gosubset prok

induction by symbiont of host systemic acquired resistance
type: Class
subclass of: induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction
subclass of: induction by symbiont of host innate immune response
subclass of: positive regulation by symbiont of host systemic acquired resistance
definition: Any process in which an organism activates systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of SAR in host
has_exact_synonym: activation by organism of systemic acquired resistance in host
has_exact_synonym: induction by organism of SAR in host
has_exact_synonym: induction by symbiont of systemic acquired resistance in host
has_obo_namespace: biological_process
id: GO:0052104
in_subset: gosubset prok

induction by symbiont of defense-related host cell wall thickening
type: Class
subclass of: induction by symbiont of host defense response
subclass of: induction by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of defense-related host cell wall thickening
definition: The activation by an organism of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of defense-related host cell wall thickening
has_exact_synonym: activation by organism of host defensive cell wall thickening
has_exact_synonym: induction by organism of host defensive cell wall thickening
has_obo_namespace: biological_process
id: GO:0052105
in_subset: gosubset prok

quorum sensing involved in interaction with host
type: Class
subclass of: interspecies quorum sensing
definition: The process in which a community of single-celled organisms living in intimate contact with a host organism monitors population density by detecting the concentration of small diffusible signal molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: quorum sensing during interaction with host
id: GO:0052106
in_subset: gosubset prok

positive regulation by symbiont of defense-related host callose deposition
type: Class
subclass of: modulation by symbiont of defense-related host callose deposition
subclass of: positive regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of callose deposition by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related papilla formation in host
has_exact_synonym: up regulation by symbiont of defense-related host callose deposition
has_exact_synonym: up-regulation by symbiont of defense-related host callose deposition
has_exact_synonym: upregulation by symbiont of defense-related host callose deposition
has_narrow_synonym: activation by symbiont of defense-related host callose deposition
has_narrow_synonym: induction by organism of defense-related host callose deposition
has_narrow_synonym: induction by organism of defense-related papilla formation in host
has_narrow_synonym: stimulation by symbiont of defense-related host callose deposition
has_obo_namespace: biological_process
id: GO:0052107
in_subset: gosubset prok

positive regulation by symbiont of defense-related host cell wall callose deposition
type: Class
subclass of: positive regulation by symbiont of defense-related host callose deposition
subclass of: modulation by symbiont of defense-related host cell wall callose deposition
subclass of: positive regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of defense-related host cell wall thickening
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related host cell wall callose deposition
has_exact_synonym: up regulation by symbiont of defense-related host cell wall callose deposition
has_exact_synonym: up-regulation by symbiont of defense-related host cell wall callose deposition
has_exact_synonym: upregulation by symbiont of defense-related host cell wall callose deposition
has_narrow_synonym: activation by symbiont of defense-related host cell wall callose deposition
has_narrow_synonym: induction by organism of defense-related host cell wall callose deposition
has_narrow_synonym: stimulation by symbiont of defense-related host cell wall callose deposition
has_obo_namespace: biological_process
id: GO:0052109
in_subset: gosubset prok

occlusion by symbiont of host vascular system
type: Class
subclass of: modification by symbiont of host structure
subclass of: occlusion by organism of vascular system in other organism involved in symbiotic interaction
definition: The process in which an organism reduces the flow of fluid within its host's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052110
in_subset: gosubset prok

modification by symbiont of host structure
type: Class
subclass of: modification by symbiont of host morphology or physiology
subclass of: modification of structure of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in an anatomical part or cellular component of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052111
in_subset: gosubset prok

occlusion by symbiont of host xylem
type: Class
subclass of: occlusion by symbiont of host vascular system
subclass of: occlusion by organism of xylem in other organism involved in symbiotic interaction
definition: The process in which an organism reduces the flow of fluid within the host xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052112
in_subset: gosubset prok

energy taxis in host environment
type: Class
subclass of: movement in host environment
definition: The directed movement of a motile cell or organism in the environment of its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: energy taxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052115
in_subset: gosubset prok

chemotaxis in host environment
type: Class
subclass of: multi-organism behavior
subclass of: movement in host environment
definition: The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: chemotaxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052116
in_subset: gosubset prok

aerotaxis in host environment
type: Class
subclass of: energy taxis in host environment
subclass of: chemotaxis in host environment
definition: The movement of a motile cell or organism in response to environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: aerotaxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052117
in_subset: gosubset prok

positive energy taxis in host environment
type: Class
subclass of: energy taxis in host environment
definition: The directed movement of a motile cell or organism on, within or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive energy taxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052118
in_subset: gosubset prok

negative energy taxis in host environment
type: Class
subclass of: energy taxis in host environment
definition: The directed movement of a motile cell or organism on, within or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative energy taxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052119
in_subset: gosubset prok

positive aerotaxis in host environment
type: Class
subclass of: aerotaxis in host environment
subclass of: positive energy taxis in host environment
subclass of: positive chemotaxis in host environment
definition: The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive aerotaxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052120
in_subset: gosubset prok

positive chemotaxis in host environment
type: Class
subclass of: chemotaxis in host environment
definition: The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive chemotaxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052121
in_subset: gosubset prok

negative aerotaxis in host environment
type: Class
subclass of: aerotaxis in host environment
subclass of: negative energy taxis in host environment
subclass of: negative chemotaxis in host environment
definition: The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative aerotaxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052122
in_subset: gosubset prok

negative chemotaxis in host environment
type: Class
subclass of: chemotaxis in host environment
definition: The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative chemotaxis in response to host environment
has_obo_namespace: biological_process
id: GO:0052123
in_subset: gosubset prok

energy taxis within host
type: Class
subclass of: movement in host
subclass of: energy taxis in host environment
definition: The directed movement of a motile cell or organism within its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052124
in_subset: gosubset prok

energy taxis on or near host
type: Class
subclass of: energy taxis in host environment
subclass of: movement on or near host
definition: The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052125
in_subset: gosubset prok

movement in host environment
type: Class
subclass of: interaction with host
definition: The directed movement of an organism or motile cell on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: movement in response to host
has_obo_namespace: biological_process
id: GO:0052126
in_subset: gosubset prok

movement on or near host
type: Class
subclass of: movement in host environment
definition: The directed movement of an organism or motile cell on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052127
in_subset: gosubset prok

positive aerotaxis on or near host
type: Class
subclass of: positive aerotaxis in host environment
subclass of: aerotaxis on or near host
subclass of: positive chemotaxis on or near host
subclass of: positive energy taxis on or near host
definition: The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052132
in_subset: gosubset prok

positive aerotaxis in host
type: Class
subclass of: positive aerotaxis in host environment
subclass of: aerotaxis in host
subclass of: positive chemotaxis in host
subclass of: positive energy taxis in host
definition: The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive aerotaxis within host
has_obo_namespace: biological_process
id: GO:0052133
in_subset: gosubset prok

negative aerotaxis on or near host
type: Class
subclass of: negative aerotaxis in host environment
subclass of: negative chemotaxis on or near host
subclass of: aerotaxis on or near host
subclass of: negative energy taxis on or near host
definition: The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052134
in_subset: gosubset prok

negative aerotaxis in host
type: Class
subclass of: negative aerotaxis in host environment
subclass of: aerotaxis in host
subclass of: negative chemotaxis in host
subclass of: negative energy taxis in host
definition: The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative aerotaxis within host
has_obo_namespace: biological_process
id: GO:0052135
in_subset: gosubset prok

negative chemotaxis on or near host
type: Class
subclass of: negative chemotaxis in host environment
subclass of: chemotaxis on or near host involved in symbiotic interaction
definition: The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052136
in_subset: gosubset prok

aerotaxis in host
type: Class
subclass of: aerotaxis in host environment
subclass of: energy taxis within host
subclass of: chemotaxis within host
definition: The movement of a motile cell or organism in response to environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: aerotaxis within host
has_obo_namespace: biological_process
id: GO:0052137
in_subset: gosubset prok

aerotaxis on or near host
type: Class
subclass of: aerotaxis in host environment
subclass of: energy taxis on or near host
subclass of: chemotaxis on or near host involved in symbiotic interaction
definition: The movement of a motile cell or organism in response to environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052138
in_subset: gosubset prok

negative chemotaxis in host
type: Class
subclass of: negative chemotaxis in host environment
subclass of: chemotaxis within host
definition: The directed movement of a motile cell or organism towards a lower concentration of a specific chemical within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative chemotaxis within host
has_obo_namespace: biological_process
id: GO:0052139
in_subset: gosubset prok

positive chemotaxis in host
type: Class
subclass of: positive chemotaxis in host environment
subclass of: chemotaxis within host
definition: The directed movement of a motile cell or organism towards a higher concentration of a specific chemical within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive chemotaxis within host
has_obo_namespace: biological_process
id: GO:0052140
in_subset: gosubset prok

positive chemotaxis on or near host
type: Class
subclass of: positive chemotaxis in host environment
subclass of: chemotaxis on or near host involved in symbiotic interaction
definition: The directed movement of a motile cell or organism towards a higher concentration of a specific chemical on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052141
in_subset: gosubset prok

chemotaxis within host
type: Class
subclass of: movement in host
subclass of: chemotaxis in host environment
definition: The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052142
in_subset: gosubset prok

chemotaxis on or near host involved in symbiotic interaction
type: Class
subclass of: chemotaxis in host environment
subclass of: movement on or near host
definition: The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: chemotaxis on or near host during symbiotic interaction
id: GO:0052143
in_subset: gosubset prok

negative energy taxis in host
type: Class
subclass of: negative energy taxis in host environment
subclass of: energy taxis within host
definition: The directed movement of a motile cell or organism within its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative energy taxis within host
has_obo_namespace: biological_process
id: GO:0052144
in_subset: gosubset prok

negative energy taxis on or near host
type: Class
subclass of: negative energy taxis in host environment
subclass of: energy taxis on or near host
definition: The directed movement of a motile cell or organism on or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052145
in_subset: gosubset prok

positive energy taxis on or near host
type: Class
subclass of: positive energy taxis in host environment
subclass of: energy taxis on or near host
definition: The directed movement of a motile cell or organism on or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052146
in_subset: gosubset prok

positive energy taxis in host
type: Class
subclass of: positive energy taxis in host environment
subclass of: energy taxis within host
definition: The directed movement of a motile cell or organism within its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive energy taxis within host
has_obo_namespace: biological_process
id: GO:0052147
in_subset: gosubset prok

modulation by symbiont of host catalytic activity
type: Class
subclass of: modulation by symbiont of host molecular function
subclass of: modulation of catalytic activity in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host enzyme activity
has_exact_synonym: modulation of catalytic activity of host by symbiont
has_exact_synonym: regulation by symbiont of host catalytic activity
has_exact_synonym: regulation of catalytic activity of host by symbiont
has_exact_synonym: regulation of host catalytic activity by symbiont
has_obo_namespace: biological_process
id: GO:0052148
in_subset: gosubset prok

modulation by symbiont of host peptidase activity
type: Class
subclass of: modulation by symbiont of host catalytic activity
subclass of: modulation of peptidase activity in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in host peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host protease activity
has_obo_namespace: biological_process
id: GO:0052149
in_subset: gosubset prok

modulation by symbiont of host apoptotic process
type: Class
subclass of: modulation by symbiont of host programmed cell death
subclass of: modulation by organism of apoptotic process in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of programmed cell death in the host, where programmed cell death proceeds by apoptosis. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of host apoptotic programmed cell death
has_narrow_synonym: modulation by symbiont of host apoptosis
has_obo_namespace: biological_process
id: GO:0052150
in_subset: gosubset prok
comment: Note that term is to be used to annotate gene products in the symbiont. To annotate host gene products, consider the biological process term 'regulation of apoptosis ; GO:0042981'.

positive regulation by symbiont of host apoptotic process
type: Class
subclass of: modulation by symbiont of host apoptotic process
subclass of: positive regulation by organism of apoptotic process in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the host, where programmed cell death proceeds by apoptosis. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_alternative_id: GO:0033669
has_alternative_id: GO:0052030
has_exact_synonym: activation by organism of host apoptosis
has_exact_synonym: activation by organism of host apoptotic programmed cell death
has_exact_synonym: induction by organism of host apoptotic programmed cell death
has_exact_synonym: induction by symbiont of host apoptosis
has_exact_synonym: positive regulation by organism of host apoptotic programmed cell death
has_exact_synonym: up regulation by organism of host apoptotic programmed cell death
has_exact_synonym: up regulation by symbiont of host apoptosis
has_exact_synonym: up-regulation by organism of host apoptotic programmed cell death
has_exact_synonym: up-regulation by symbiont of host apoptosis
has_exact_synonym: upregulation by organism of host apoptotic programmed cell death
has_exact_synonym: upregulation by symbiont of host apoptosis
has_narrow_synonym: activation by symbiont of host apoptosis
has_narrow_synonym: positive regulation by symbiont of host apoptosis
has_narrow_synonym: stimulation by symbiont of host apoptosis
has_obo_namespace: biological_process
id: GO:0052151
in_subset: gosubset prok
comment: Note that term is to be used to annotate gene products in the symbiont. To annotate host gene products, consider the biological process term 'positive regulation of apoptosis ; GO:0043065'.

modulation by symbiont of host B-cell mediated immune response
type: Class
subclass of: modulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of the B-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation by organism of host B-cell mediated immune response
has_obo_namespace: biological_process
id: GO:0052154
in_subset: gosubset prok

modulation by symbiont of host cell-mediated immune response
type: Class
subclass of: modulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of any form of cell-based immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of host cell-based immune response
has_obo_namespace: biological_process
id: GO:0052155
in_subset: gosubset prok

modulation by symbiont of host T-cell mediated immune response
type: Class
subclass of: modulation by symbiont of host cell-mediated immune response
subclass of: modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052156
in_subset: gosubset prok

modulation by symbiont of microbe-associated molecular pattern-induced host innate immune response
type: Class
subclass of: modulation by symbiont of host innate immune response
subclass of: modulation by organism of microbe-associated molecular pattern-induced innate immune response in other organism involved in symbiotic interaction
definition: Any process that involves recognition of a microbe-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of microbe-associated molecular pattern-induced host innate immunity
has_narrow_synonym: modulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity
has_obo_namespace: biological_process
id: GO:0052157
in_subset: gosubset prok

modulation by symbiont of host resistance gene-dependent defense response
type: Class
subclass of: modulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense response in host by specific elicitors
has_exact_synonym: modulation by organism of host gene-for-gene resistance
has_exact_synonym: modulation by organism of pathogen-race/host plant cultivar-specific resistance in symbiont
has_obo_namespace: biological_process
id: GO:0052158
in_subset: gosubset prok

modulation by symbiont of host induced systemic resistance
type: Class
subclass of: modulation by organism of induced systemic resistance in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of induced systemic resistance in host
has_obo_namespace: biological_process
id: GO:0052159
in_subset: gosubset prok

modulation by symbiont of host systemic acquired resistance
type: Class
subclass of: modulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of systemic acquired resistance in host
has_obo_namespace: biological_process
id: GO:0052160
in_subset: gosubset prok

modulation by symbiont of defense-related host cell wall thickening
type: Class
subclass of: modulation by symbiont of host cellular process
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of host defensive cell wall thickening
id: GO:0052161
in_subset: gosubset prok

modulation by symbiont of defense-related host calcium ion flux
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense-related host Ca2+ flux
has_obo_namespace: biological_process
id: GO:0052162
in_subset: gosubset prok

modulation by symbiont of defense-related host nitric oxide production
type: Class
subclass of: modulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
subclass of: response to defense-related host nitric oxide production
definition: Any process in which an organism modulates the frequency, rate or extent of the production of nitric oxide as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense-related host NO production
has_obo_namespace: biological_process
id: GO:0052163
in_subset: gosubset prok

modulation by symbiont of defense-related host reactive oxygen species production
type: Class
subclass of: modulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
subclass of: response to defense-related host reactive oxygen species production
definition: Any process in which an organism modulates the frequency, rate or extent of the production of reactive oxygen species as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense-related host AOS production
has_exact_synonym: modulation by organism of defense-related host ROI production
has_exact_synonym: modulation by organism of defense-related host ROS production
has_exact_synonym: modulation by organism of defense-related host active oxygen species production
has_exact_synonym: modulation by organism of defense-related host metabolic burst
has_exact_synonym: modulation by organism of defense-related host oxidative burst
has_exact_synonym: modulation by organism of defense-related host reactive oxidative species production
has_exact_synonym: modulation by organism of defense-related host reactive oxygen intermediate production
has_exact_synonym: modulation by organism of defense-related host respiratory burst
has_obo_namespace: biological_process
id: GO:0052164
in_subset: gosubset prok

modulation by symbiont of host phytoalexin production
type: Class
subclass of: modulation by organism of phytoalexin production in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
subclass of: response to host phytoalexin production
definition: Any process in which an organism modulates the frequency, rate or extent of production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052165
in_subset: gosubset prok

positive regulation by symbiont of host innate immune response
type: Class
subclass of: modulation by symbiont of host innate immune response
subclass of: positive regulation by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of host innate immunity
has_exact_synonym: positive regulation of host innate immune response
has_exact_synonym: up regulation by symbiont of host innate immunity
has_exact_synonym: up-regulation by symbiont of host innate immunity
has_exact_synonym: upregulation by symbiont of host innate immunity
has_narrow_synonym: activation by symbiont of host innate immunity
has_narrow_synonym: induction of host innate immune response
has_narrow_synonym: induction of host innate immunity
has_narrow_synonym: stimulation by symbiont of host innate immunity
has_obo_namespace: biological_process
id: GO:0052166
in_subset: gosubset prok

modulation by symbiont of host innate immune response
type: Class
subclass of: modulation by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host innate immunity
has_exact_synonym: modulation of host innate immune response
has_obo_namespace: biological_process
id: GO:0052167
in_subset: gosubset prok

modulation by symbiont of defense-related host calcium-dependent protein kinase pathway
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the host calcium-dependent protein kinase signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense-related host CDPK pathway
has_obo_namespace: biological_process
id: GO:0052168
in_subset: gosubset prok

pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response
type: Class
subclass of: modulation by symbiont of host innate immune response
subclass of: pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: pathogen-associated molecular pattern dependent modulation by symbiont of host innate immunity
has_obo_namespace: biological_process
id: GO:0052169
in_subset: gosubset prok

negative regulation by symbiont of host innate immune response
type: Class
subclass of: negative regulation by symbiont of host defense response
subclass of: modulation by symbiont of host innate immune response
subclass of: negative regulation by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: negative regulation by symbiont of host immune response
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism, the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host innate immunity
has_exact_synonym: down-regulation by symbiont of host innate immunity
has_exact_synonym: downregulation by symbiont of host innate immunity
has_exact_synonym: negative regulation by symbiont of host innate immunity
has_exact_synonym: negative regulation of host innate immune response
has_narrow_synonym: inhibition by symbiont of host innate immunity
has_obo_namespace: biological_process
id: GO:0052170
in_subset: gosubset prok

metabolism by symbiont of host cell wall cellulose
type: Class
subclass of: metabolism by symbiont of host carbohydrate
subclass of: metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052172

response to defenses of other organism involved in symbiotic interaction
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response to defenses of other organism during symbiotic interaction
id: GO:0052173
in_subset: gosubset prok

metabolism by symbiont of host macromolecule
type: Class
subclass of: metabolism by symbiont of substance in host
subclass of: metabolism of macromolecule in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052174

metabolism by symbiont of host carbohydrate
type: Class
subclass of: metabolism by symbiont of host macromolecule
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving carbohydrates within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052175

metabolism by symbiont of host glucan
type: Class
subclass of: metabolism by symbiont of host carbohydrate
subclass of: metabolism by organism of glucan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving glucans within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052176

metabolism by symbiont of host xylan
type: Class
subclass of: metabolism by symbiont of host carbohydrate
subclass of: metabolism by organism of xylan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052177

metabolism by symbiont of host cell wall chitin
type: Class
subclass of: metabolism by symbiont of host carbohydrate
subclass of: metabolism by organism of cell wall chitin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052178

metabolism by symbiont of host cell wall pectin
type: Class
subclass of: metabolism by symbiont of host carbohydrate
subclass of: metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052179

negative regulation of peptidase activity in other organism involved in symbiotic interaction
type: Class
subclass of: negative regulation of peptidase activity in other organism
subclass of: modulation of peptidase activity in other organism involved in symbiotic interaction
subclass of: negative regulation of catalytic activity in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protease activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation of protease activity in other organism during symbiotic interaction
has_exact_synonym: down-regulation of protease activity in other organism during symbiotic interaction
has_exact_synonym: downregulation of protease activity in other organism during symbiotic interaction
has_exact_synonym: negative regulation of protease activity in other organism during symbiotic interaction
has_narrow_synonym: inhibition of protease activity in other organism during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0052180
in_subset: gosubset prok

modulation by host of symbiont defense response
type: Class
subclass of: response to symbiont defenses
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052181

modification by host of symbiont morphology or physiology via secreted substance
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction
subclass of: interaction with symbiont via secreted substance involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by a substance secreted by one of the organisms. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052182

modification by host of symbiont structure
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modification of structure of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in an anatomical part or cellular component of the host organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052183

modification of structure of other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in an anatomical part or cellular component of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modification of structure of other organism during symbiotic interaction
id: GO:0052185
in_subset: gosubset prok

modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of hormones or growth regulators in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of hormone or growth regulator levels in other organism during symbiotic interaction
id: GO:0052186
in_subset: gosubset prok

modification by host of symbiont cellular component
type: Class
subclass of: modification by host of symbiont structure
subclass of: modification of cellular component in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a symbiont cellular component. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052187

modification of cellular component in other organism involved in symbiotic interaction
type: Class
subclass of: modification of structure of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a cellular component in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modification of cellular component in other organism during symbiotic interaction
id: GO:0052188
in_subset: gosubset prok

modulation by symbiont of defense-related host cell wall callose deposition
type: Class
subclass of: modulation by symbiont of defense-related host callose deposition
subclass of: modulation by symbiont of defense-related host cell wall thickening
subclass of: modulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052189
in_subset: gosubset prok

modulation by symbiont of host phagocytosis
type: Class
subclass of: modulation by symbiont of host cellular process
subclass of: modulation of phagocytosis in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052190

positive regulation by symbiont of host phagocytosis
type: Class
subclass of: modulation by symbiont of host phagocytosis
subclass of: positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of host phagocytosis
has_exact_synonym: up-regulation by symbiont of host phagocytosis
has_exact_synonym: upregulation by symbiont of host phagocytosis
has_narrow_synonym: activation by symbiont of host phagocytosis
has_narrow_synonym: stimulation by symbiont of host phagocytosis
has_obo_namespace: biological_process
id: GO:0052191

movement in symbiont environment
type: Class
subclass of: interaction with symbiont
definition: The directed movement of an organism or motile cell on, within or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052193
in_subset: gosubset prok

movement on or near symbiont
type: Class
subclass of: movement in symbiont environment
definition: The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052194
in_subset: gosubset prok

negative regulation by host of symbiont defense response
type: Class
subclass of: suppression of symbiont defenses
subclass of: modulation by host of symbiont defense response
subclass of: suppression of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by host of symbiont defense response
has_exact_synonym: down-regulation by host of symbiont defense response
has_exact_synonym: downregulation by host of symbiont defense response
has_narrow_synonym: inhibition by host of symbiont defense response
has_obo_namespace: biological_process
id: GO:0052196

positive regulation by host of symbiont defense response
type: Class
subclass of: modulation by host of symbiont defense response
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by host of symbiont defense response
has_exact_synonym: up-regulation by host of symbiont defense response
has_exact_synonym: upregulation by host of symbiont defense response
has_narrow_synonym: activation by host of symbiont defense response
has_narrow_synonym: stimulation by host of symbiont defense response
has_obo_namespace: biological_process
id: GO:0052197

modulation of peptidase activity in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of catalytic activity in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of protease activity in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modulation of protease activity in other organism during symbiotic interaction
id: GO:0052198
in_subset: gosubset prok

negative regulation of catalytic activity in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of catalytic activity in other organism involved in symbiotic interaction
subclass of: negative regulation of molecular function in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: inhibition of enzyme activity in other organism
has_exact_synonym: negative regulation of enzyme activity in other organism during symbiotic interaction
has_narrow_synonym: inhibition of enzyme activity in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation of enzyme activity in other organism during symbiotic interaction
has_related_synonym: down-regulation of enzyme activity in other organism during symbiotic interaction
has_related_synonym: downregulation of enzyme activity in other organism during symbiotic interaction
id: GO:0052199
in_subset: gosubset prok

response to host defenses
type: Class
subclass of: response to defenses of other organism involved in symbiotic interaction
subclass of: response to host
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052200
in_subset: gosubset prok

response to symbiont defenses
type: Class
subclass of: response to symbiont
subclass of: response to defenses of other organism involved in symbiotic interaction
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052201

negative regulation by symbiont of defense-related host cell wall callose deposition
type: Class
subclass of: negative regulation by symbiont of defense-related host callose deposition
subclass of: modulation by symbiont of defense-related host cell wall callose deposition
subclass of: negative regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of defense-related host cell wall callose deposition
has_exact_synonym: down-regulation by symbiont of defense-related host cell wall callose deposition
has_exact_synonym: downregulation by symbiont of defense-related host cell wall callose deposition
has_narrow_synonym: inhibition by symbiont of defense-related host cell wall callose deposition
has_obo_namespace: biological_process
id: GO:0052202
in_subset: gosubset prok

modulation of catalytic activity in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of molecular function in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of enzyme activity within other organism during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0052203
in_subset: gosubset prok

negative regulation of molecular function in other organism involved in symbiotic interaction
type: Class
subclass of: negative regulation of molecular function in other organism
subclass of: modulation of molecular function in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the functional activity of proteins in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation of protein function in other organism during symbiotic interaction
has_exact_synonym: down-regulation of protein function in other organism during symbiotic interaction
has_exact_synonym: downregulation of protein function in other organism during symbiotic interaction
has_exact_synonym: inhibition of protein function in other organism
has_exact_synonym: negative regulation of protein function in other organism during symbiotic interaction
has_narrow_synonym: inhibition of protein function in other organism during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0052204
in_subset: gosubset prok

modulation of molecular function in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of molecular function in other organism
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the function of proteins in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modification of molecular function in other organism during symbiotic interaction
has_exact_synonym: modification of protein function in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modulation of molecular function in other organism during symbiotic interaction
id: GO:0052205
in_subset: gosubset prok

modification of morphology or physiology of other organism via protein secreted by type II secretion system involved in symbiotic interaction
type: Class
subclass of: interaction with other organism via protein secreted by type II secretion system involved in symbiotic interaction
subclass of: modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type II secretion system in the first organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modification of morphology or physiology of other organism via protein secreted by type II secretion system during symbiotic interaction
id: GO:0052206
in_subset: gosubset prok

modification of morphology or physiology of other organism via protein secreted by type III secretion system involved in symbiotic interaction
type: Class
subclass of: interaction with other organism via protein secreted by type III secretion system involved in symbiotic interaction
subclass of: modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type III secretion system in the first organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modification of morphology or physiology of other organism via protein secreted by type III secretion system during symbiotic interaction
id: GO:0052207
in_subset: gosubset prok

modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction
type: Class
subclass of: interaction with other organism via substance secreted by type IV secretion system involved in symbiotic interaction
subclass of: modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction
id: GO:0052208
in_subset: gosubset prok

interaction with other organism via substance secreted by type IV secretion system involved in symbiotic interaction
type: Class
subclass of: interaction with other organism via secreted substance involved in symbiotic interaction
definition: An interaction with a second organism mediated by a substance secreted by the first organism by a type IV secretion system, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: interaction with other organism via substance secreted by type IV secretion system during symbiotic interaction
id: GO:0052209
in_subset: gosubset prok

interaction with other organism via protein secreted by type III secretion system involved in symbiotic interaction
type: Class
subclass of: interaction with other organism via secreted substance involved in symbiotic interaction
definition: An interaction with a second organism mediated by a substance secreted by the first organism by a type III secretion system, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: interaction with other organism via protein secreted by type III secretion system during symbiotic interaction
id: GO:0052210
in_subset: gosubset prok

interaction with other organism via protein secreted by type II secretion system involved in symbiotic interaction
type: Class
subclass of: interaction with other organism via secreted substance involved in symbiotic interaction
definition: An interaction with a second organism mediated by a substance secreted by the first organism by a type II secretion system, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: interaction with other organism via protein secreted by type II secretion system during symbiotic interaction
id: GO:0052211
in_subset: gosubset prok

modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
subclass of: interaction with other organism via secreted substance involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by one of the organisms, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: modification of host morphology or physiology via effector molecule
has_narrow_synonym: modification of host morphology or physiology via ellicitor
has_obo_namespace: biological_process
has_related_synonym: modification of morphology or physiology of other organism via secreted substance during symbiotic interaction
id: GO:0052212
in_subset: gosubset prok

interaction with symbiont via secreted substance involved in symbiotic interaction
type: Class
subclass of: interaction with symbiont
subclass of: interaction with other organism via secreted substance involved in symbiotic interaction
definition: An interaction with the symbiont organism mediated by a substance secreted by the other (host) organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: interaction with symbiont via secreted substance during symbiotic interaction
id: GO:0052213

metabolism of substance in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism metabolic process
definition: The chemical reactions and pathways performed by an organism in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism of substance in other organism during symbiotic interaction
id: GO:0052214
in_subset: gosubset prok

biosynthesis of substance in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism biosynthetic process
subclass of: metabolism of substance in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism in a second organism resulting in the formation of substances, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: biosynthesis of substance in other organism during symbiotic interaction
id: GO:0052226

catabolism of substance in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism catabolic process
subclass of: metabolism of substance in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism in a second organism resulting in the breakdown of substances, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism of substance in other organism during symbiotic interaction
id: GO:0052227

metabolism by symbiont of host protein
type: Class
subclass of: metabolism by symbiont of host macromolecule
subclass of: metabolism by organism of protein in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052228
in_subset: gosubset prok

metabolism of macromolecule in other organism involved in symbiotic interaction
type: Class
subclass of: metabolism of substance in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving macromolecules within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism of macromolecule in other organism during symbiotic interaction
id: GO:0052229

modulation of intracellular transport in other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of intracellular trafficking in other organism
has_obo_namespace: biological_process
has_related_synonym: modulation of intracellular transport in other organism during symbiotic interaction
id: GO:0052230
in_subset: gosubset prok

modulation of phagocytosis in other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation of phagocytosis in other organism during symbiotic interaction
id: GO:0052231

modulation of programmed cell death in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of programmed cell death in other organism
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of programmed cell death in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_alternative_id: GO:0052459
has_narrow_synonym: modulation by organism of non-apoptotic programmed cell death in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modulation of programmed cell death in other organism during symbiotic interaction
id: GO:0052248
in_subset: gosubset prok

modulation of RNA levels in other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of RNA in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation of RNA levels in other organism during symbiotic interaction
id: GO:0052249
in_subset: gosubset prok

modulation of signal transduction in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of signal transduction in other organism
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the signal transduction pathways, the cascade of processes by which a signal interacts with a receptor, occurring in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation of signal transduction pathway in other organism during symbiotic interaction
id: GO:0052250
in_subset: gosubset prok

induction by organism of defense response of other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: The activation by an organism of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation of defense response of other organism
has_obo_namespace: biological_process
has_related_synonym: induction by organism of defense response of other organism during symbiotic interaction
id: GO:0052251
in_subset: gosubset prok

negative regulation by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism involved in symbiotic interaction
type: Class
subclass of: negative regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: negative regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of salicylic acid-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative modulation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_exact_synonym: negative modulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism
has_exact_synonym: negative regulation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: inhibition by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism during symbiotic interaction
id: GO:0052252
in_subset: gosubset prok

negative regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: suppression of defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the salicylic acid-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of SA-mediated defense response of other organism
has_exact_synonym: suppression by organism of salicylic acid-mediated defense response of other organism
has_exact_synonym: suppression of SA mediated defense response of other organism
has_narrow_synonym: inhibition by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
id: GO:0052253
in_subset: gosubset prok

negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: suppression of defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the ethylene-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: suppression by organism of ethylene-mediated defense response of other organism
has_narrow_synonym: inhibition by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
id: GO:0052254
in_subset: gosubset prok

modulation by organism of defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
subclass of: response to defenses of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the defense response of a second organism, the response mounted by that organism in response to the presence of the first organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense response of other organism during symbiotic interaction
id: GO:0052255
in_subset: gosubset prok

modulation by organism of inflammatory response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of inflammatory response of other organism during symbiotic interaction
id: GO:0052256
in_subset: gosubset prok

pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: MAMP dependent induction of innate immunity of other organism
has_exact_synonym: MAMP-dependent induction of innate immunity of other organism
has_exact_synonym: PAMP dependent induction of innate immunity of other organism
has_exact_synonym: PAMP-dependent induction of innate immunity of other organism
has_exact_synonym: general elicitor dependent induction of innate immunity of other organism
has_exact_synonym: general elicitor-dependent induction of innate immunity of other organism
has_exact_synonym: pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism during symbiotic interaction
id: GO:0052257
in_subset: gosubset prok

negative regulation by organism of pathogen-associated molecular pattern-induced innate immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of microbe-associated molecular pattern-induced innate immune response in other organism involved in symbiotic interaction
subclass of: negative regulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process that involves recognition of a microbe-associated molecular pattern, and by which an organism stops, prevents, or reduces the frequency, rate or extent of the innate immune response, the first line of defense against infection, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by organism of pathogen-associated molecular pattern-induced innate immunity of other organism involved in symbiotic interaction
has_exact_synonym: suppression of MAMP induced innate immunity of other organism
has_exact_synonym: suppression of MAMP-induced innate immunity of other organism
has_exact_synonym: suppression of PAMP induced innate immunity of other organism
has_exact_synonym: suppression of PAMP-induced innate immunity of other organism
has_exact_synonym: suppression of general elicitor induced innate immunity of other organism
has_exact_synonym: suppression of general elicitor-induced innate immunity of other organism
has_exact_synonym: suppression of pathogen-associated molecular pattern-induced innate immunity of other organism
has_narrow_synonym: inhibition by organism of pathogen-associated molecular pattern-induced innate immunity of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of pathogen-associated molecular pattern-induced innate immunity of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of pathogen-associated molecular pattern-induced innate immunity of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of pathogen-associated molecular pattern-induced innate immunity of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of pathogen-associated molecular pattern-induced innate immunity of other organism during symbiotic interaction
id: GO:0052258
in_subset: gosubset prok

positive regulation by organism of inflammatory response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of inflammatory response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of inflammatory response of other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of inflammatory response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of inflammatory response of other organism during symbiotic interaction
has_related_synonym: up regulation by organism of inflammatory response of other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of inflammatory response of other organism during symbiotic interaction
has_related_synonym: upregulation by organism of inflammatory response of other organism during symbiotic interaction
id: GO:0052259
in_subset: gosubset prok

negative regulation by organism of inflammatory response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of inflammatory response of other organism involved in symbiotic interaction
subclass of: suppression of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the inflammatory response; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of inflammatory response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of inflammatory response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of inflammatory response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of inflammatory response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of inflammatory response of other organism during symbiotic interaction
id: GO:0052260
in_subset: gosubset prok

suppression of defense response of other organism involved in symbiotic interaction
type: Class
subclass of: suppression of defenses of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by organism of defense response of other organism involved in symbiotic interaction
has_exact_synonym: suppression of defense response of other organism
has_narrow_synonym: inhibition by organism of defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of defense response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of defense response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of defense response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of defense response of other organism during symbiotic interaction
id: GO:0052261
in_subset: gosubset prok

induction by organism of phytoalexin production in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of phytoalexin production in other organism involved in symbiotic interaction
subclass of: induction by organism of immune response of other organism involved in symbiotic interaction
definition: The activation by an organism of the production of phytoalexins that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: activation by organism of phytoalexin production in other organism during symbiotic interaction
has_related_synonym: induction by organism of phytoalexin production in other organism during symbiotic interaction
id: GO:0052262
in_subset: gosubset prok

induction by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
type: Class
subclass of: induction by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
subclass of: induction by organism of immune response of other organism involved in symbiotic interaction
definition: The activation by an organism of the production of nitric oxide that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of defense-related NO production in other organism
has_exact_synonym: activation by organism of defense-related nitric oxide production in other organism
has_exact_synonym: induction by organism of defense-related NO production in other organism
has_obo_namespace: biological_process
has_related_synonym: induction by organism of defense-related nitric oxide production in other organism during symbiotic interaction
id: GO:0052263
in_subset: gosubset prok

induction by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
type: Class
subclass of: induction by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
subclass of: induction by organism of immune response of other organism involved in symbiotic interaction
definition: The activation by an organism of the production of reactive oxygen species that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of defense-related AOS production in other organism
has_exact_synonym: activation by organism of defense-related ROI production in other organism
has_exact_synonym: activation by organism of defense-related ROS production in other organism
has_exact_synonym: activation by organism of defense-related active oxygen species production in other organism
has_exact_synonym: activation by organism of defense-related metabolic burst in other organism
has_exact_synonym: activation by organism of defense-related oxidative burst in other organism
has_exact_synonym: activation by organism of defense-related reactive oxidative species production in other organism
has_exact_synonym: activation by organism of defense-related reactive oxygen intermediate production in other organism
has_exact_synonym: activation by organism of defense-related reactive oxygen species production in other organism
has_exact_synonym: activation by organism of defense-related respiratory burst in other organism
has_exact_synonym: induction by organism of defense-related AOS production in other organism
has_exact_synonym: induction by organism of defense-related ROI production in other organism
has_exact_synonym: induction by organism of defense-related ROS production in other organism
has_exact_synonym: induction by organism of defense-related active oxygen species production in other organism
has_exact_synonym: induction by organism of defense-related metabolic burst in other organism
has_exact_synonym: induction by organism of defense-related oxidative burst in other organism
has_exact_synonym: induction by organism of defense-related reactive oxidative species production in other organism
has_exact_synonym: induction by organism of defense-related reactive oxygen intermediate production in other organism
has_exact_synonym: induction by organism of defense-related respiratory burst in other organism
has_obo_namespace: biological_process
has_related_synonym: induction by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
id: GO:0052264
in_subset: gosubset prok

induction by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
subclass of: induction by organism of defense response of other organism involved in symbiotic interaction
definition: The activation by an organism of a flux of calcium ions that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of Ca2+ flux of other organism
has_exact_synonym: induction by organism of Ca2+ flux of other organism
has_obo_namespace: biological_process
has_related_synonym: activation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
has_related_synonym: induction by organism of defense-related calcium ion flux in other organism during symbiotic interaction
id: GO:0052265
in_subset: gosubset prok

negative regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: suppression of defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the jasmonic acid-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: suppression by organism of JA-mediated defense response of other organism
has_narrow_synonym: inhibition by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
id: GO:0052266
in_subset: gosubset prok

negative regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: negative regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: negative regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of jasmonic acid-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by organism of defense-related JA-mediated signal transduction pathway in other organism
has_narrow_synonym: inhibition by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052267
in_subset: gosubset prok

negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: negative regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of ethylene-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052268
in_subset: gosubset prok

positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of ethylene-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense-related ethylene-mediated signal transduction pathway in other organism
has_narrow_synonym: activation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: induction by organism of defense-related ethylene-mediated signal transduction pathway in other organism
has_narrow_synonym: stimulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: upregulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052269
in_subset: gosubset prok

positive regulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of salicylic acid-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: activation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism
has_narrow_synonym: activation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: induction by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: induction by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism
has_narrow_synonym: positive regulation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: stimulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: upregulation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: upregulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052270
in_subset: gosubset prok

positive regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of jasmonic acid-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: activation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: activation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism
has_narrow_synonym: activation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: induction by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: induction by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism
has_narrow_synonym: stimulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: upregulation by organism of defense-related SA-mediated signal transduction pathway in other organism
has_narrow_synonym: upregulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052271
in_subset: gosubset prok

positive regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the salicylic acid-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of SA-mediated defense response of other organism
has_narrow_synonym: activation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_narrow_synonym: induction by organism of SA-mediated defense response of other organism
has_narrow_synonym: induction by organism of salicylic acid-mediated defense response of other organism
has_narrow_synonym: stimulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: up regulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: upregulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
id: GO:0052272
in_subset: gosubset prok

positive regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of JA-mediated defense response of other organism
has_narrow_synonym: activation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_narrow_synonym: induction by organism of JA-mediated defense response of other organism
has_narrow_synonym: induction by organism of jasmonic acid-mediated defense response of other organism
has_narrow_synonym: stimulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: up regulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
has_related_synonym: upregulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
id: GO:0052273
in_subset: gosubset prok

positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of ethylene-mediated defense response of other organism
has_narrow_synonym: activation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_narrow_synonym: induction by organism of ethylene-mediated defense response of other organism
has_narrow_synonym: stimulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_narrow_synonym: upregulation by organism of ethylene-mediated defense response of other organism
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_related_synonym: up regulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
has_related_synonym: upregulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
id: GO:0052274
in_subset: gosubset prok

negative regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: suppression of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of MAP kinase-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by organism of defense-related MAPK-mediated signal transduction pathway in other organism
has_exact_synonym: negative regulation by organism of defense-related mitogen-activated protein kinase-mediated signal transduction pathway in other organism
has_narrow_synonym: inhibition by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052275
in_subset: gosubset prok

positive regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of MAP kinase-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related MAPK-mediated signal transduction pathway in other organism
has_exact_synonym: positive regulation by organism of defense-related mitogen-activated protein kinase-mediated signal transduction pathway in other organism
has_narrow_synonym: activation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: activation by organism of defense-related ethylene-mediated signal transduction pathway in other organism
has_narrow_synonym: induction by organism of defense-related ethylene-mediated signal transduction pathway in other organism
has_narrow_synonym: stimulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: upregulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052276
in_subset: gosubset prok

modulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of MAP kinase-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of defense-related MAPK-mediated signal transduction pathway of other organism
has_exact_synonym: modulation of defense-related mitogen activated protein kinase-mediated signal transduction pathway of other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052277
in_subset: gosubset prok

negative regulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction
subclass of: negative regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the cell-based immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of cell-mediated immune response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of cell-mediated immune response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of cell-mediated immune response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of cell-mediated immune response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of cell-based immune response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of cell-mediated immune response of other organism during symbiotic interaction
id: GO:0052278
in_subset: gosubset prok

modulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the ethylene-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of ethylene-mediated defense response of other organism during symbiotic interaction
id: GO:0052279
in_subset: gosubset prok

negative regulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction
type: Class
subclass of: negative regulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction
subclass of: modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the T-cell mediated immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of T-cell mediated immune response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of T-cell mediated immune response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of T-cell mediated immune response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of T-cell mediated immune response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of T-cell mediated immune response of other organism during symbiotic interaction
id: GO:0052280
in_subset: gosubset prok

negative regulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction
subclass of: negative regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the B-cell mediated immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of B-cell mediated immune response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of B-cell mediated immune response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of B-cell mediated immune response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of B-cell mediated immune response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of B-cell mediated immune response of other organism during symbiotic interaction
id: GO:0052281
in_subset: gosubset prok

negative regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction
type: Class
subclass of: suppression of defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the accumulation of callose that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: suppression by organism of defense-related callose deposition of other organism
has_narrow_synonym: inhibition by organism of defense-related callose deposition in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of defense-related callose deposition in other organism during symbiotic interaction
id: GO:0052282
in_subset: gosubset prok

modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the jasmonic acid-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of JA-mediated defense response of other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of jasmonic acid-mediated defense response of other organism during symbiotic interaction
id: GO:0052283
in_subset: gosubset prok

modulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the salicylic acid-mediated defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of SA-mediated defense response of other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of salicylic acid-mediated defense response of other organism during symbiotic interaction
id: GO:0052284
in_subset: gosubset prok

modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the accumulation of callose that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related callose deposition of other organism during symbiotic interaction
id: GO:0052285
in_subset: gosubset prok

induction by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
subclass of: induction by organism of immune response of other organism involved in symbiotic interaction
definition: The activation by an organism of the resistance gene-dependent defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of defense response of other organism by specific elicitors
has_exact_synonym: activation by organism of gene-for-gene resistance in other organism
has_exact_synonym: activation by organism of resistance gene-dependent defense response of other organism
has_exact_synonym: induction by organism of defense response of other organism by specific elicitors
has_exact_synonym: induction by organism of gene-for-gene resistance in other organism
has_obo_namespace: biological_process
has_related_synonym: induction by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
id: GO:0052286
in_subset: gosubset prok

positive regulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of calcium-dependent protein kinase pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense-related calcium-dependent protein kinase pathway in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of defense-related calcium-dependent protein kinase pathway in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related CDPK pathway of other organism
has_related_synonym: positive regulation by organism of defense-related calcium-dependent protein kinase pathway in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related calcium-dependent protein kinase pathway in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related calcium-dependent protein kinase pathway in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related calcium-dependent protein kinase pathway in other organism during symbiotic interaction
id: GO:0052287
in_subset: gosubset prok

induction by organism of induced systemic resistance in other organism involved in symbiotic interaction
type: Class
subclass of: induction by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of induced systemic resistance in other organism involved in symbiotic interaction
definition: Any process in which an organism activates induced systemic resistance, a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of ISR in other organism
has_exact_synonym: induction by organism of ISR in other organism
has_obo_namespace: biological_process
has_related_synonym: activation by organism of induced systemic resistance in other organism during symbiotic interaction
has_related_synonym: induction by organism of induced systemic resistance in other organism during symbiotic interaction
id: GO:0052288
in_subset: gosubset prok

induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction
type: Class
subclass of: induction by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction
definition: Any process in which an organism activates systemic acquired resistance, a salicylic acid-mediated response that confers broad spectrum systemic resistance, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of SAR in other organism
has_exact_synonym: activation by organism of systemic acquired resistance in other organism
has_exact_synonym: induction by organism of SAR in other organism
has_obo_namespace: biological_process
has_related_synonym: induction by organism of systemic acquired resistance in other organism during symbiotic interaction
id: GO:0052289
in_subset: gosubset prok

induction by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
type: Class
subclass of: induction by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
definition: The activation by an organism of the thickening of cell walls that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: activation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_related_synonym: activation by organism of defensive cell wall thickening in other organism during symbiotic interaction
has_related_synonym: induction by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_related_synonym: induction by organism of defensive cell wall thickening in other organism during symbiotic interaction
id: GO:0052290
in_subset: gosubset prok

positive regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the accumulation of callose that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related papilla formation in other organism
has_exact_synonym: up regulation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_exact_synonym: up-regulation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_exact_synonym: upregulation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_narrow_synonym: activation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_narrow_synonym: induction by organism of defense-related callose deposition of other organism
has_narrow_synonym: induction by organism of defense-related papilla formation in other organism
has_narrow_synonym: stimulation by organism of defense-related callose deposition in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related callose deposition in other organism during symbiotic interaction
id: GO:0052291
in_subset: gosubset prok

positive regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the deposition by a second organism of callose in its cell walls, occurring as part of the defense response, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_narrow_synonym: induction by organism of defense-related cell wall callose deposition in other organism
has_narrow_synonym: stimulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
id: GO:0052292
in_subset: gosubset prok

modulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the B-cell mediated immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation by organism of B-cell mediated immune response of other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of B-cell mediated immune response of other organism during symbiotic interaction
id: GO:0052293
in_subset: gosubset prok

modulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of any form of cell-based immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of cell-based immune response of other organism during symbiotic interaction
has_related_synonym: modulation by organism of cell-mediated immune response of other organism during symbiotic interaction
id: GO:0052294
in_subset: gosubset prok

modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the T-cell mediated immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of T-cell mediated immune response of other organism during symbiotic interaction
id: GO:0052295

modulation by organism of microbe-associated molecular pattern-induced innate immune response in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process that involves recognition of a microbe-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response, the first line of defense against infection, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of microbe-associated molecular pattern-induced innate immunity in other organism involved in symbiotic interaction
has_narrow_synonym: modulation by organism of pathogen-associated molecular pattern-induced innate immunity in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of pathogen-associated molecular pattern-induced innate immunity in other organism during symbiotic interaction
id: GO:0052296

modulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the resistance gene-dependent defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense response in other organism by specific elicitors
has_exact_synonym: modulation by organism of gene-for-gene resistance in other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
id: GO:0052297
in_subset: gosubset prok

modulation by organism of induced systemic resistance in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of induced systemic resistance, a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of induced systemic resistance in other organism during symbiotic interaction
id: GO:0052298
in_subset: gosubset prok

modulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of systemic acquired resistance, a salicylic acid-mediated response that confers broad spectrum systemic resistance, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of systemic acquired resistance in other organism during symbiotic interaction
id: GO:0052299
in_subset: gosubset prok

modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the thickening of cell walls that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_related_synonym: modulation by organism of defensive cell wall thickening in other organism during symbiotic interaction
id: GO:0052300
in_subset: gosubset prok

modulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense-related Ca2+ flux in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related calcium ion flux in other organism during symbiotic interaction
id: GO:0052301
in_subset: gosubset prok

modulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
type: Class
subclass of: response to defense-related nitric oxide production by other organism involved in symbiotic interaction
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the production of nitric oxide that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related NO production in other organism during symbiotic interaction
has_related_synonym: modulation by organism of defense-related nitric oxide production in other organism during symbiotic interaction
id: GO:0052302
in_subset: gosubset prok

modulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
type: Class
subclass of: response to defense-related reactive oxygen species production by other organism involved in symbiotic interaction
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the production of reactive oxygen species that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense-related AOS production in other organism
has_exact_synonym: modulation by organism of defense-related ROI production in other organism
has_exact_synonym: modulation by organism of defense-related ROS production in other organism
has_exact_synonym: modulation by organism of defense-related active oxygen species production in other organism
has_exact_synonym: modulation by organism of defense-related metabolic burst in other organism
has_exact_synonym: modulation by organism of defense-related oxidative burst in other organism
has_exact_synonym: modulation by organism of defense-related reactive oxidative species production in other organism
has_exact_synonym: modulation by organism of defense-related reactive oxygen intermediate production in other organism
has_exact_synonym: modulation by organism of defense-related respiratory burst in other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
id: GO:0052303
in_subset: gosubset prok

modulation by organism of phytoalexin production in other organism involved in symbiotic interaction
type: Class
subclass of: response to phytoalexin production by other organism involved in symbiotic interaction
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of production of phytoalexins that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of phytoalexin production in other organism during symbiotic interaction
id: GO:0052304
in_subset: gosubset prok

positive regulation by organism of innate immune response in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of innate immunity in other organism involved in symbiotic interaction
has_exact_synonym: positive regulation of innate immune response of other organism
has_narrow_synonym: activation by organism of innate immunity in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of innate immunity in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of innate immunity in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of innate immunity in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of innate immunity in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of innate immunity in other organism during symbiotic interaction
id: GO:0052305
in_subset: gosubset prok

modulation by organism of innate immune response in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the innate immune response, the first line of defense against infection, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of innate immunity in other organism involved in symbiotic interaction
has_exact_synonym: modulation of innate immune response of other organism
has_obo_namespace: biological_process
id: GO:0052306
in_subset: gosubset prok

modulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of calcium-dependent protein kinase signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of defense-related CDPK pathway in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related calcium-dependent protein kinase pathway in other organism during symbiotic interaction
id: GO:0052307
in_subset: gosubset prok

pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response, the first line of defense against infection, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism during symbiotic interaction
id: GO:0052308

negative regulation by organism of innate immune response in other organism involved in symbiotic interaction
type: Class
subclass of: suppression of defense response of other organism involved in symbiotic interaction
subclass of: modulation by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: negative regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of innate immune response of other organism
has_narrow_synonym: inhibition by organism of innate immunity in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of innate immunity in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of innate immunity in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of innate immunity in other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of innate immunity in other organism during symbiotic interaction
id: GO:0052309
in_subset: gosubset prok

modulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the accumulation of callose in cell walls that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
id: GO:0052310
in_subset: gosubset prok

negative regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
type: Class
subclass of: negative regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction
subclass of: modulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the accumulation of callose in cell walls that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of defense-related cell wall callose deposition in other organism during symbiotic interaction
id: GO:0052311
in_subset: gosubset prok

modulation of transcription in other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of transcription in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation of transcription in other organism during symbiotic interaction
id: GO:0052312
in_subset: gosubset prok

modulation of nutrient release from other organism involved in symbiotic interaction
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation of nutrient release from other organism during symbiotic interaction
id: GO:0052313
in_subset: gosubset prok

positive regulation by organism of phytoalexin production in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of phytoalexin production in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of phytoalexins that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of phytoalexin production in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of phytoalexin production in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of phytoalexin production in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of phytoalexin production in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of phytoalexin production in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of phytoalexin production in other organism during symbiotic interaction
id: GO:0052329
in_subset: gosubset prok

positive regulation by organism of programmed cell death in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of programmed cell death in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_alternative_id: GO:0052518
has_alternative_id: GO:0052529
has_exact_synonym: upregulation by organism of programmed cell death in other organism involved in symbiotic interaction
has_narrow_synonym: activation by organism of programmed cell death in other organism during symbiotic interaction
has_narrow_synonym: positive regulation by organism of non-apoptotic programmed cell death in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of programmed cell death in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: enhancement of other organism programmed cell death by organism
has_related_synonym: positive regulation by organism of programmed cell death in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of programmed cell death in other organism during symbiotic interaction
id: GO:0052330
in_subset: gosubset prok

hemolysis in other organism involved in symbiotic interaction
type: Class
subclass of: hemolysis in other organism
subclass of: cytolysis in other organism involved in symbiotic interaction
definition: The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another, where two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: haemolysis in other organism
has_exact_synonym: hemolysis of cells in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: hemolysin activity
has_related_synonym: hemolysis by organism of RBCs in other organism during symbiotic interaction
has_related_synonym: hemolysis by organism of erythrocytes in other organism during symbiotic interaction
has_related_synonym: hemolysis by organism of red blood cells in other organism during symbiotic interaction
has_related_synonym: hemolysis of cells in other organism during symbiotic interaction
id: GO:0052331
in_subset: gosubset prok

modification by organism of membrane in other organism involved in symbiotic interaction
type: Class
subclass of: modification of cellular component in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a cellular membrane of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: modification by organism of cell membrane in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modification by organism of cell membrane in other organism during symbiotic interaction
id: GO:0052332
in_subset: gosubset prok

modification by organism of cell wall of other organism involved in symbiotic interaction
type: Class
subclass of: modification of cellular component in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of cell wall of other organism
has_related_synonym: modification by organism of cell wall of other organism during symbiotic interaction
id: GO:0052333
in_subset: gosubset prok

modification by organism of cytoskeleton of other organism involved in symbiotic interaction
type: Class
subclass of: modification of cellular component in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of the cytoskeleton of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modification by organism of cytoskeleton of other organism during symbiotic interaction
id: GO:0052334
in_subset: gosubset prok

modification by host of symbiont cytoskeleton
type: Class
subclass of: modification by host of symbiont cellular component
subclass of: modification by organism of cytoskeleton of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of the symbiont cytoskeleton. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052335

modification by host of symbiont cell wall
type: Class
subclass of: modification by host of symbiont cellular component
subclass of: modification by organism of cell wall of other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: metabolism of symbiont cell wall by organism
has_obo_namespace: biological_process
id: GO:0052336

modification by host of symbiont membrane
type: Class
subclass of: modification by host of symbiont cellular component
subclass of: modification by organism of membrane in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the structure or function of a symbiont cellular membrane. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: modification by host of symbiont cell membrane
has_obo_namespace: biological_process
id: GO:0052337

disruption by host of symbiont cell wall
type: Class
subclass of: modification by host of symbiont cell wall
subclass of: disruption by organism of cell wall of other organism involved in symbiotic interaction
subclass of: disruption by host of symbiont cellular component
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism of symbiont cell wall by organism
has_exact_synonym: degradation of symbiont cell wall by organism
has_exact_synonym: disassembly by host of symbiont cell wall
has_obo_namespace: biological_process
id: GO:0052338

disruption by organism of cell wall of other organism involved in symbiotic interaction
type: Class
subclass of: modification by organism of cell wall of other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: disassembly by organism of cell wall of other organism during symbiotic interaction
id: GO:0052339
in_subset: gosubset prok

catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction
type: Class
subclass of: catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
subclass of: metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of cell wall cellulose in other organism during symbiotic interaction
id: GO:0052340
in_subset: gosubset prok

catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
type: Class
subclass of: catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
subclass of: metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of cell wall pectin in other organism during symbiotic interaction
id: GO:0052341
in_subset: gosubset prok

catabolism by organism of cell wall chitin in other organism involved in symbiotic interaction
type: Class
subclass of: catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
subclass of: metabolism by organism of cell wall chitin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of cell wall chitin in other organism during symbiotic interaction
id: GO:0052342
in_subset: gosubset prok

positive regulation by symbiont of host phytoalexin production
type: Class
subclass of: modulation by symbiont of host phytoalexin production
subclass of: positive regulation by organism of phytoalexin production in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of host phytoalexin production
has_exact_synonym: up-regulation by symbiont of host phytoalexin production
has_exact_synonym: upregulation by symbiont of host phytoalexin production
has_narrow_synonym: activation by symbiont of host phytoalexin production
has_narrow_synonym: stimulation by symbiont of host phytoalexin production
has_obo_namespace: biological_process
id: GO:0052344
in_subset: gosubset prok

positive regulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense-related nitric oxide production in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of defense-related nitric oxide production in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related NO production in other organism during symbiotic interaction
has_related_synonym: positive regulation by organism of defense-related nitric oxide production in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related nitric oxide production in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related nitric oxide production in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related nitric oxide production in other organism during symbiotic interaction
id: GO:0052345
in_subset: gosubset prok

positive regulation by symbiont of defense-related host nitric oxide production
type: Class
subclass of: modulation by symbiont of defense-related host nitric oxide production
subclass of: positive regulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related host NO production
has_exact_synonym: up regulation by symbiont of defense-related host nitric oxide production
has_exact_synonym: up-regulation by symbiont of defense-related host nitric oxide production
has_exact_synonym: upregulation by symbiont of defense-related host nitric oxide production
has_narrow_synonym: activation by symbiont of defense-related host nitric oxide production
has_narrow_synonym: stimulation by symbiont of defense-related host nitric oxide production
has_obo_namespace: biological_process
id: GO:0052347
in_subset: gosubset prok

positive regulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of reactive oxygen species that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related AOS production in other organism
has_exact_synonym: positive regulation by organism of defense-related ROI production in other organism
has_exact_synonym: positive regulation by organism of defense-related ROS production in other organism
has_exact_synonym: positive regulation by organism of defense-related active oxygen species production in other organism
has_exact_synonym: positive regulation by organism of defense-related metabolic burst in other organism
has_exact_synonym: positive regulation by organism of defense-related oxidative burst in other organism
has_exact_synonym: positive regulation by organism of defense-related reactive oxidative species production in other organism
has_exact_synonym: positive regulation by organism of defense-related reactive oxygen intermediate production in other organism
has_exact_synonym: positive regulation by organism of defense-related respiratory burst in other organism
has_narrow_synonym: activation by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related reactive oxygen species production in other organism during symbiotic interaction
id: GO:0052348
in_subset: gosubset prok

biosynthesis by host of substance in symbiont
type: Class
subclass of: biosynthesis of substance in other organism involved in symbiotic interaction
subclass of: metabolism by host of substance in symbiont
definition: The chemical reactions and pathways performed by an organism in its symbiont resulting in the formation of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052352

catabolism by host of symbiont carbohydrate
type: Class
subclass of: catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
subclass of: catabolism by host of symbiont macromolecule
subclass of: metabolism by host of symbiont carbohydrate
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052353

catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism carbohydrate catabolic process
subclass of: catabolism by organism of macromolecule in other organism involved in symbiotic interaction
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of carbohydrate in other organism during symbiotic interaction
id: GO:0052354

catabolism by host of symbiont cell wall cellulose
type: Class
subclass of: catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction
subclass of: catabolism by host of symbiont carbohydrate
subclass of: metabolism by host of symbiont cell wall cellulose
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052355

catabolism by host of symbiont cell wall chitin
type: Class
subclass of: catabolism by organism of cell wall chitin in other organism involved in symbiotic interaction
subclass of: catabolism by host of symbiont carbohydrate
subclass of: metabolism by host of symbiont cell wall chitin
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052356

catabolism by host of symbiont cell wall pectin
type: Class
subclass of: catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
subclass of: catabolism by host of symbiont carbohydrate
subclass of: metabolism by host of symbiont cell wall pectin
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052357

catabolism by host of symbiont glucan
type: Class
subclass of: catabolism by host of symbiont carbohydrate
subclass of: catabolism by organism of glucan in other organism involved in symbiotic interaction
subclass of: metabolism by host of symbiont glucan
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052358

catabolism by organism of glucan in other organism involved in symbiotic interaction
type: Class
subclass of: catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
subclass of: metabolism by organism of glucan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of glucan in other organism during symbiotic interaction
id: GO:0052359

catabolism by host of symbiont macromolecule
type: Class
subclass of: catabolism by organism of macromolecule in other organism involved in symbiotic interaction
subclass of: catabolism by host of substance in symbiont
subclass of: metabolism by host of symbiont macromolecule
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052360

catabolism by organism of macromolecule in other organism involved in symbiotic interaction
type: Class
subclass of: catabolism of substance in other organism involved in symbiotic interaction
subclass of: metabolism of macromolecule in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of macromolecule in other organism during symbiotic interaction
id: GO:0052361

catabolism by host of symbiont protein
type: Class
subclass of: catabolism by host of symbiont macromolecule
subclass of: catabolism by organism of protein in other organism involved in symbiotic interaction
subclass of: metabolism by host of symbiont protein
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052362

catabolism by organism of protein in other organism involved in symbiotic interaction
type: Class
subclass of: catabolism by organism of macromolecule in other organism involved in symbiotic interaction
subclass of: metabolism by organism of protein in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of protein in other organism during symbiotic interaction
id: GO:0052363

catabolism by host of substance in symbiont
type: Class
subclass of: catabolism of substance in other organism involved in symbiotic interaction
subclass of: metabolism by host of substance in symbiont
definition: The chemical reactions and pathways performed by an organism in its symbiont resulting in the breakdown of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052364

catabolism by host of symbiont xylan
type: Class
subclass of: catabolism by host of symbiont carbohydrate
subclass of: catabolism by organism of xylan in other organism involved in symbiotic interaction
subclass of: metabolism by host of symbiont xylan
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052365

catabolism by organism of xylan in other organism involved in symbiotic interaction
type: Class
subclass of: catabolism by organism of carbohydrate in other organism involved in symbiotic interaction
subclass of: metabolism by organism of xylan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: catabolism by organism of xylan in other organism during symbiotic interaction
id: GO:0052366

disruption by host of symbiont cellular component
type: Class
subclass of: modification by host of symbiont cellular component
subclass of: disruption by organism of cellular component in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism of symbiont cellular component by organism
has_exact_synonym: catabolism of symbiont structural constituent by organism
has_exact_synonym: degradation of symbiont cellular component by organism
has_obo_namespace: biological_process
has_related_synonym: disassembly by host of symbiont cellular component
id: GO:0052367

disruption by organism of cellular component in other organism involved in symbiotic interaction
type: Class
subclass of: modification of structure of other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism of cellular component in other organism
has_exact_synonym: catabolism of structural constituent in other organism
has_exact_synonym: degradation of cellular component in other organism
has_obo_namespace: biological_process
has_related_synonym: disassembly by organism of cellular component in other organism during symbiotic interaction
has_related_synonym: disassembly by organism of cellular component in other organism involved in symbiotic interaction
id: GO:0052368
in_subset: gosubset prok

positive regulation by symbiont of defense-related host reactive oxygen species production
type: Class
subclass of: modulation by symbiont of defense-related host reactive oxygen species production
subclass of: positive regulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host defense response
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of reactive oxygen species as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related host AOS production
has_exact_synonym: positive regulation by organism of defense-related host ROI production
has_exact_synonym: positive regulation by organism of defense-related host ROS production
has_exact_synonym: positive regulation by organism of defense-related host active oxygen species production
has_exact_synonym: positive regulation by organism of defense-related host metabolic burst
has_exact_synonym: positive regulation by organism of defense-related host oxidative burst
has_exact_synonym: positive regulation by organism of defense-related host reactive oxidative species production
has_exact_synonym: positive regulation by organism of defense-related host reactive oxygen intermediate production
has_exact_synonym: positive regulation by organism of defense-related host respiratory burst
has_exact_synonym: up regulation by symbiont of defense-related host reactive oxygen species production
has_exact_synonym: up-regulation by symbiont of defense-related host reactive oxygen species production
has_exact_synonym: upregulation by symbiont of defense-related host reactive oxygen species production
has_narrow_synonym: activation by symbiont of defense-related host reactive oxygen species production
has_narrow_synonym: stimulation by symbiont of defense-related host reactive oxygen species production
has_obo_namespace: biological_process
id: GO:0052369
in_subset: gosubset prok

entry of organism into cell of other organism by promotion of phagocytosis in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction
definition: The invasion by an organism of a cell of a second organism by utilizing the second organism's phagocytosis mechanism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: entry of organism into cell of other organism by promotion of phagocytosis in other organism during symbiotic interaction
id: GO:0052370

evasion or tolerance by organism of nitric oxide produced by other organism involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of immune response of other organism involved in symbiotic interaction
subclass of: response to defense-related nitric oxide production by other organism involved in symbiotic interaction
definition: The process in which an organism avoids the effects of nitric oxide produced as a defense response by a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: evasion or tolerance by organism of NO produced by other organism during symbiotic interaction
has_related_synonym: evasion or tolerance by organism of nitric oxide produced by other organism during symbiotic interaction
has_related_synonym: evasion or tolerance by organism of other organism-produced NO
has_related_synonym: evasion or tolerance by organism of other organism-produced nitric oxide
id: GO:0052376

evasion or tolerance by organism of phytoalexins produced by other organism involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of immune response of other organism involved in symbiotic interaction
subclass of: response to phytoalexin production by other organism involved in symbiotic interaction
definition: The process in which an organism avoids the effects of phytoalexins produced as a defense response by the second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: evasion or tolerance of other organism phytoalexins
has_exact_synonym: evasion or tolerance of phytoalexins produced by other organism
has_narrow_synonym: phytoalexin detoxification
has_obo_namespace: biological_process
has_related_synonym: evasion or tolerance by organism of phytoalexins produced by other organism during symbiotic interaction
id: GO:0052378

induction by organism of innate immune response in other organism involved in symbiotic interaction
type: Class
subclass of: induction by organism of defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: induction by organism of immune response of other organism involved in symbiotic interaction
definition: The activation by an organism of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of innate immune response in other organism involved in symbiotic interaction
has_exact_synonym: activation by organism of innate immunity in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: induction by organism of innate immunity in other organism during symbiotic interaction
id: GO:0052382
in_subset: gosubset prok

evasion or tolerance by organism of reactive oxygen species produced by other organism involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of immune response of other organism involved in symbiotic interaction
subclass of: response to defense-related reactive oxygen species production by other organism involved in symbiotic interaction
definition: The process in which an organism avoids the effects of reactive oxygen species produced as a defense response by a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: evasion or tolerance by organism of defense-related respiratory burst in other organism during symbiotic interaction
has_exact_synonym: evasion or tolerance of AOS produced by other organism
has_exact_synonym: evasion or tolerance of ROIs produced by other organism
has_exact_synonym: evasion or tolerance of ROS produced by other organism
has_exact_synonym: evasion or tolerance of active oxygen species produced by other organism
has_exact_synonym: evasion or tolerance of reactive oxygen intermediates produced by other organism
has_exact_synonym: evasion or tolerance of reactive oxygen species produced by other organism
has_narrow_synonym: evasion by organism of cellular damage caused by oxidative burst of other organism
has_obo_namespace: biological_process
has_related_synonym: evasion or tolerance by organism of defense-related metabolic burst in other organism during symbiotic interaction
has_related_synonym: evasion or tolerance by organism of defense-related oxidative burst in other organism during symbiotic interaction
has_related_synonym: evasion or tolerance by organism of reactive oxygen species produced by other organism during symbiotic interaction
has_related_synonym: evasion or tolerance by organism of reactive oxygen species produced during defense response of other organism
id: GO:0052385

positive regulation by symbiont of defense-related host calcium ion flux
type: Class
subclass of: positive regulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
subclass of: modulation by symbiont of defense-related host calcium ion flux
subclass of: positive regulation by symbiont of host defense response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related host Ca2+ flux
has_exact_synonym: up regulation by symbiont of defense-related host calcium ion flux
has_exact_synonym: up-regulation by symbiont of defense-related host calcium ion flux
has_exact_synonym: upregulation by symbiont of defense-related host calcium ion flux
has_narrow_synonym: activation by symbiont of defense-related host calcium ion flux
has_narrow_synonym: stimulation by symbiont of defense-related host calcium ion flux
has_obo_namespace: biological_process
id: GO:0052389
in_subset: gosubset prok

induction by symbiont of host innate immune response
type: Class
subclass of: positive regulation by symbiont of host innate immune response
subclass of: induction by organism of innate immune response in other organism involved in symbiotic interaction
subclass of: induction by symbiont of host immune response
definition: The activation by an organism of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of host innate immune response
has_exact_synonym: activation by organism of host innate immunity
has_exact_synonym: induction by symbiont of host innate immunity
has_obo_namespace: biological_process
has_related_synonym: induction by organism of host innate immune response
id: GO:0052390
in_subset: gosubset prok

induction by symbiont of defense-related host calcium ion flux
type: Class
subclass of: induction by symbiont of host defense response
subclass of: induction by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of defense-related host calcium ion flux
definition: The activation by an organism of a flux of calcium ions that occurs as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation by organism of host Ca2+ flux
has_exact_synonym: activation by organism of host calcium ion flux
has_exact_synonym: induction by organism of host Ca2+ flux
has_obo_namespace: biological_process
id: GO:0052391
in_subset: gosubset prok

induction by host of symbiont defense response
type: Class
subclass of: positive regulation by host of symbiont defense response
subclass of: induction by organism of defense response of other organism involved in symbiotic interaction
definition: The activation by an organism of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: activation of symbiont defense response
has_obo_namespace: biological_process
id: GO:0052393

negative regulation by host of symbiont catalytic activity
type: Class
subclass of: negative regulation of catalytic activity in other organism involved in symbiotic interaction
subclass of: negative regulation by host of symbiont molecular function
subclass of: modulation by host of symbiont catalytic activity
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by host of symbiont enzyme activity
has_exact_synonym: down-regulation by host of symbiont enzyme activity
has_exact_synonym: downregulation by host of symbiont enzyme activity
has_exact_synonym: inhibition of symbiont enzyme activity
has_exact_synonym: negative regulation by host of symbiont enzyme activity
has_narrow_synonym: inhibition by host of symbiont enzyme activity
has_obo_namespace: biological_process
id: GO:0052403

negative regulation by host of symbiont peptidase activity
type: Class
subclass of: negative regulation of peptidase activity in other organism involved in symbiotic interaction
subclass of: negative regulation by host of symbiont catalytic activity
subclass of: modulation by host of symbiont peptidase activity
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by host of symbiont protease activity
has_exact_synonym: down-regulation by host of symbiont protease activity
has_exact_synonym: downregulation by host of symbiont protease activity
has_exact_synonym: inhibition of symbiont protease activity
has_exact_synonym: negative regulation by host of symbiont protease activity
has_narrow_synonym: inhibition by host of symbiont protease activity
has_obo_namespace: biological_process
id: GO:0052404

negative regulation by host of symbiont molecular function
type: Class
subclass of: negative regulation of molecular function in other organism involved in symbiotic interaction
subclass of: modification by host of symbiont molecular function
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the functional activity of symbiont proteins. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by host of symbiont protein function
has_exact_synonym: down-regulation by host of symbiont protein function
has_exact_synonym: downregulation by host of symbiont protein function
has_exact_synonym: inhibition of symbiont protein function
has_exact_synonym: negative regulation by host of symbiont protein function
has_narrow_synonym: inhibition by host of symbiont protein function
has_obo_namespace: biological_process
id: GO:0052405

metabolism by host of symbiont carbohydrate
type: Class
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
subclass of: metabolism by host of symbiont macromolecule
definition: The chemical reactions and pathways performed by an organism involving carbohydrates within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052406

metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism carbohydrate metabolic process
subclass of: metabolism of macromolecule in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving carbohydrates within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of carbohydrate in other organism during symbiotic interaction
id: GO:0052407

metabolism by host of symbiont cell wall cellulose
type: Class
subclass of: metabolism by host of symbiont carbohydrate
subclass of: metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052408

metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism cell wall macromolecule metabolic process
subclass of: multi-organism glucan metabolic process
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of cell wall cellulose in other organism during symbiotic interaction
id: GO:0052409

metabolism by host of symbiont cell wall chitin
type: Class
subclass of: metabolism by host of symbiont carbohydrate
subclass of: metabolism by organism of cell wall chitin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052410

metabolism by organism of cell wall chitin in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism cell wall macromolecule metabolic process
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving chitin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of cell wall chitin in other organism during symbiotic interaction
id: GO:0052411

metabolism by host of symbiont cell wall pectin
type: Class
subclass of: metabolism by host of symbiont carbohydrate
subclass of: metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052412

metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism cell wall macromolecule metabolic process
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving pectin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of cell wall pectin in other organism during symbiotic interaction
id: GO:0052413

metabolism by host of symbiont glucan
type: Class
subclass of: metabolism by host of symbiont carbohydrate
subclass of: metabolism by organism of glucan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving glucans within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052414

metabolism by organism of glucan in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism glucan metabolic process
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving glucans within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of glucan in other organism during symbiotic interaction
id: GO:0052415

metabolism by host of symbiont macromolecule
type: Class
subclass of: metabolism of macromolecule in other organism involved in symbiotic interaction
subclass of: metabolism by host of substance in symbiont
definition: The chemical reactions and pathways performed by an organism involving macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052416

metabolism by host of symbiont protein
type: Class
subclass of: metabolism by host of symbiont macromolecule
subclass of: metabolism by organism of protein in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052417

metabolism by organism of protein in other organism involved in symbiotic interaction
type: Class
subclass of: metabolism of macromolecule in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving protein macromolecules within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of protein in other organism during symbiotic interaction
id: GO:0052418
in_subset: gosubset prok

metabolism by host of substance in symbiont
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: metabolism of substance in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052419

metabolism by host of symbiont xylan
type: Class
subclass of: metabolism by host of symbiont carbohydrate
subclass of: metabolism by organism of xylan in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052420

metabolism by organism of xylan in other organism involved in symbiotic interaction
type: Class
subclass of: multi-organism cell wall macromolecule metabolic process
subclass of: metabolism by organism of carbohydrate in other organism involved in symbiotic interaction
definition: The chemical reactions and pathways performed by an organism involving xylan within a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: metabolism by organism of xylan in other organism during symbiotic interaction
id: GO:0052421

modulation by host of symbiont catalytic activity
type: Class
subclass of: modulation of catalytic activity in other organism involved in symbiotic interaction
subclass of: modification by host of symbiont molecular function
definition: The process in which an organism effects a change in symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by host of symbiont enzyme activity
has_obo_namespace: biological_process
id: GO:0052422

positive regulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense response in other organism by specific elicitors
has_exact_synonym: positive regulation by organism of gene-for-gene resistance in other organism
has_narrow_synonym: activation by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
has_related_synonym: up regulation by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
has_related_synonym: upregulation by organism of resistance gene-dependent defense response of other organism during symbiotic interaction
id: GO:0052423
in_subset: gosubset prok

modulation by host of symbiont peptidase activity
type: Class
subclass of: modulation of peptidase activity in other organism involved in symbiotic interaction
subclass of: modulation by host of symbiont catalytic activity
definition: The process in which an organism effects a change in symbiont peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by host of symbiont protease activity
has_obo_namespace: biological_process
id: GO:0052427

modification by host of symbiont molecular function
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modulation of molecular function in other organism involved in symbiotic interaction
definition: The process in which an organism effects a change in the function of proteins in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modification by host of symbiont protein function
has_obo_namespace: biological_process
id: GO:0052428

modulation by host of symbiont RNA levels
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modulation of RNA levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of RNA in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052430

modulation by organism of apoptotic process in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of apoptotic process in other organism
subclass of: modulation of programmed cell death in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of programmed cell death by apoptosis in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by organism of apoptotic programmed cell death in other organism during symbiotic interaction
has_narrow_synonym: modulation by organism of apoptosis in other organism involved in symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of apoptosis in other organism during symbiotic interaction
id: GO:0052433
in_subset: gosubset prok

modulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
type: Class
subclass of: modulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: modulation by host of symbiont protein kinase-mediated signal transduction
definition: Any process in which an organism modulates the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of defense-related symbiont MAPK-mediated signal transduction pathway by organism
has_exact_synonym: modulation of defense-related symbiont mitogen activated protein kinase-mediated signal transduction pathway by organism
has_obo_namespace: biological_process
id: GO:0052435

modulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of ethylene-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052441
in_subset: gosubset prok

modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of jasmonic acid-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of defense-related JA-mediated signal transduction pathway in other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052443
in_subset: gosubset prok

modulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of salicylic acid-mediated signal transduction pathways that occur as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of defense-related SA-mediated signal transduction pathway in other organism
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism during symbiotic interaction
id: GO:0052445
in_subset: gosubset prok

modulation by organism of ethylene levels in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of ethylene in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of ethylene levels in other organism during symbiotic interaction
id: GO:0052449
in_subset: gosubset prok

modulation by organism of jasmonic acid levels in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of jasmonic acid in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of jasmonic acid levels in other organism during symbiotic interaction
id: GO:0052456
in_subset: gosubset prok

modulation by host of nutrient release from symbiont
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modulation of nutrient release from other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052460

modulation by host of symbiont phagocytosis
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modulation of phagocytosis in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052462

modulation by organism of salicylic acid levels in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
definition: The alteration by an organism of the levels of salicylic acid in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of salicylic acid levels in other organism during symbiotic interaction
id: GO:0052469
in_subset: gosubset prok

modulation by host of symbiont signal transduction pathway
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052470

modulation by host of symbiont transcription
type: Class
subclass of: modification by host of symbiont morphology or physiology
subclass of: modulation of transcription in other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of its symbiont's transcription.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052472

negative regulation by organism of entry into cell of other organism via phagocytosis involved in symbiotic interaction
type: Class
subclass of: evasion or tolerance of defenses of other organism involved in symbiotic interaction
definition: Any process in which an organism stops or prevents itself undergoing phagocytosis into a cell in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of entry into cell of other organism via phagocytosis during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of entry into cell of other organism via phagocytosis during symbiotic interaction
has_related_synonym: down-regulation by organism of entry into cell of other organism via phagocytosis during symbiotic interaction
has_related_synonym: downregulation by organism of entry into cell of other organism via phagocytosis during symbiotic interaction
has_related_synonym: negative regulation by organism of entry into cell of other organism via other organism phagocytosis during symbiotic interaction
has_related_synonym: negative regulation by organism of entry into cell of other organism via phagocytosis during symbiotic interaction
id: GO:0052483

negative regulation by host of symbiont programmed cell death
type: Class
subclass of: negative regulation by organism of programmed cell death in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of programmed cell death in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by host of symbiont programmed cell death
has_exact_synonym: down-regulation by host of symbiont programmed cell death
has_exact_synonym: downregulation by host of symbiont programmed cell death
has_exact_synonym: inhibition of symbiont programmed cell death
has_narrow_synonym: inhibition by host of symbiont programmed cell death
has_obo_namespace: biological_process
id: GO:0052489
in_subset: gosubset prok

negative regulation by organism of programmed cell death in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of programmed cell death in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of programmed cell death in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: inhibition of programmed cell death in other organism
has_narrow_synonym: inhibition by organism of programmed cell death in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of programmed cell death in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of programmed cell death in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of programmed cell death in other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of programmed cell death in other organism during symbiotic interaction
id: GO:0052490
in_subset: gosubset prok

negative regulation by host of symbiont signal transduction pathway
type: Class
subclass of: modulation by host of symbiont signal transduction pathway
subclass of: negative regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by host of symbiont signal transduction pathway
has_exact_synonym: down-regulation by host of symbiont signal transduction pathway
has_exact_synonym: downregulation by host of symbiont signal transduction pathway
has_exact_synonym: negative modulation by organism of symbiont signal transduction pathway
has_narrow_synonym: inhibition by host of symbiont signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052492

negative regulation by organism of signal transduction in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the second organism signal transduction pathways, the cascade of processes by which a signal interacts with a receptor, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: inhibition by organism of signal transduction pathway in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: downregulation by organism of signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: negative modulation by organism of other organism signal transduction pathway
has_related_synonym: negative regulation by organism of signal transduction pathway in other organism during symbiotic interaction
id: GO:0052493
in_subset: gosubset prok

occlusion by host of symbiont vascular system
type: Class
subclass of: modification by host of symbiont structure
subclass of: occlusion by organism of vascular system in other organism involved in symbiotic interaction
definition: The process in which an organism reduces the flow of fluid within its symbiont's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052494
in_subset: gosubset prok

occlusion by organism of vascular system in other organism involved in symbiotic interaction
type: Class
subclass of: modification of structure of other organism involved in symbiotic interaction
definition: The process in which an organism reduces the flow of fluid within its second organism's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: occlusion by organism of vascular system in other organism during symbiotic interaction
id: GO:0052495
in_subset: gosubset prok

occlusion by host of symbiont xylem
type: Class
subclass of: occlusion by host of symbiont vascular system
subclass of: occlusion by organism of xylem in other organism involved in symbiotic interaction
definition: The process in which an organism reduces the flow of fluid within the symbiont xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052496
in_subset: gosubset prok

occlusion by organism of xylem in other organism involved in symbiotic interaction
type: Class
subclass of: occlusion by organism of vascular system in other organism involved in symbiotic interaction
definition: The process in which an organism reduces the flow of fluid within the xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves, of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: occlusion by organism of xylem in other organism during symbiotic interaction
id: GO:0052497
in_subset: gosubset prok

positive regulation by organism of apoptotic process in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation of apoptotic process in other organism
subclass of: positive regulation by symbiont of host programmed cell death
subclass of: modulation by organism of apoptotic process in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death by apoptosis in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_alternative_id: GO:0052388
has_exact_synonym: induction by organism of apoptosis in other organism involved in symbiotic interaction
has_narrow_synonym: activation by organism of apoptosis in other organism during symbiotic interaction
has_narrow_synonym: positive regulation by organism of apoptosis in other organism involved in symbiotic interaction
has_narrow_synonym: positive regulation by organism of apoptotic process in other organism involved in symbiotic interaction
has_narrow_synonym: stimulation by organism of apoptosis in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: activation by organism of apoptotic programmed cell death in other organism during symbiotic interaction
has_related_synonym: induction by organism of apoptosis in other organism during symbiotic interaction
has_related_synonym: induction by organism of apoptotic programmed cell death in other organism during symbiotic interaction
has_related_synonym: positive regulation by organism of apoptosis in other organism during symbiotic interaction
has_related_synonym: positive regulation by organism of apoptotic programmed cell death in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of apoptosis in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of apoptosis in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of apoptosis in other organism during symbiotic interaction
id: GO:0052501
in_subset: gosubset prok

positive regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
type: Class
subclass of: positive regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction
subclass of: modulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
subclass of: positive regulation by host of symbiont protein kinase-mediated signal transduction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense-related symbiont MAPK-mediated signal transduction pathway
has_exact_synonym: positive regulation by organism of defense-related symbiont mitogen-activated protein kinase-mediated signal transduction pathway
has_exact_synonym: up regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_exact_synonym: up-regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_exact_synonym: upregulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_narrow_synonym: activation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_narrow_synonym: activation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_narrow_synonym: induction by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_narrow_synonym: stimulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_narrow_synonym: upregulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052502

positive regulation by symbiont of host defense response
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of host defense response
has_exact_synonym: up-regulation by symbiont of host defense response
has_exact_synonym: upregulation by symbiont of host defense response
has_narrow_synonym: activation by symbiont of host defense response
has_narrow_synonym: stimulation by symbiont of host defense response
has_obo_namespace: biological_process
id: GO:0052509
in_subset: gosubset prok

positive regulation by organism of defense response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense response of other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of defense response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense response of other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense response of other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense response of other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense response of other organism during symbiotic interaction
id: GO:0052510
in_subset: gosubset prok

positive regulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction
definition: The increase by an organism of the levels of hormones or growth regulators in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive modulation of hormone or growth regulator levels in other organism
has_narrow_synonym: activation by organism of hormone or growth regulator levels in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of hormone or growth regulator levels in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of hormone or growth regulator levels in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of hormone or growth regulator levels in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of hormone or growth regulator levels in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of hormone or growth regulator levels in other organism during symbiotic interaction
id: GO:0052513
in_subset: gosubset prok

positive regulation by host of nutrient release from symbiont
type: Class
subclass of: modulation by host of nutrient release from symbiont
subclass of: positive regulation by organism of nutrient release from other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: promotion of nutrient release from symbiont
has_exact_synonym: up regulation by host of nutrient release from symbiont
has_exact_synonym: up-regulation by host of nutrient release from symbiont
has_exact_synonym: upregulation by host of nutrient release from symbiont
has_narrow_synonym: activation by host of nutrient release from symbiont
has_narrow_synonym: stimulation by host of nutrient release from symbiont
has_obo_namespace: biological_process
id: GO:0052519

positive regulation by organism of nutrient release from other organism involved in symbiotic interaction
type: Class
subclass of: modulation of nutrient release from other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: promotion of nutrient release from other organism
has_narrow_synonym: activation by organism of nutrient release from other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of nutrient release from other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of nutrient release from other organism during symbiotic interaction
has_related_synonym: up regulation by organism of nutrient release from other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of nutrient release from other organism during symbiotic interaction
has_related_synonym: upregulation by organism of nutrient release from other organism during symbiotic interaction
id: GO:0052520
in_subset: gosubset prok

positive regulation by host of symbiont phagocytosis
type: Class
subclass of: modulation by host of symbiont phagocytosis
subclass of: positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by host of symbiont phagocytosis
has_exact_synonym: up-regulation by host of symbiont phagocytosis
has_exact_synonym: upregulation by host of symbiont phagocytosis
has_narrow_synonym: activation by host of symbiont phagocytosis
has_narrow_synonym: stimulation by host of symbiont phagocytosis
has_obo_namespace: biological_process
id: GO:0052521

positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction
type: Class
subclass of: modulation of phagocytosis in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of phagocytosis in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of phagocytosis in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of phagocytosis in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of phagocytosis in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of phagocytosis in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of phagocytosis in other organism during symbiotic interaction
id: GO:0052522

positive regulation by host of symbiont signal transduction pathway
type: Class
subclass of: modulation by host of symbiont signal transduction pathway
subclass of: positive regulation by organism of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by host of symbiont signal transduction pathway
has_exact_synonym: up-regulation by host of symbiont signal transduction pathway
has_exact_synonym: upregulation by host of symbiont signal transduction pathway
has_narrow_synonym: activation by host of symbiont signal transduction pathway
has_narrow_synonym: stimulation by host of symbiont signal transduction pathway
has_obo_namespace: biological_process
id: GO:0052525

positive regulation by organism of signal transduction in other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation of signal transduction in other organism
subclass of: modulation of signal transduction in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the second organism signal transduction pathways, the cascade of processes by which a signal interacts with a receptor, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of signal transduction pathway in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of signal transduction pathway in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of signal transduction pathway in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of signal transduction pathway in other organism during symbiotic interaction
id: GO:0052526
in_subset: gosubset prok

positive regulation by symbiont of host resistance gene-dependent defense response
type: Class
subclass of: modulation by symbiont of host resistance gene-dependent defense response
subclass of: positive regulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of defense response in host by specific elicitors
has_exact_synonym: positive regulation by organism of host gene-for-gene resistance
has_exact_synonym: positive regulation by organism of pathogen-race/host plant cultivar-specific resistance in symbiont
has_exact_synonym: up regulation by symbiont of host resistance gene-dependent defense response
has_exact_synonym: up-regulation by symbiont of host resistance gene-dependent defense response
has_exact_synonym: upregulation by symbiont of host resistance gene-dependent defense response
has_narrow_synonym: activation by symbiont of host resistance gene-dependent defense response
has_narrow_synonym: stimulation by symbiont of host resistance gene-dependent defense response
has_obo_namespace: biological_process
id: GO:0052527
in_subset: gosubset prok

positive regulation by organism of induced systemic resistance in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of induced systemic resistance in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of induced systemic resistance, a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of induced systemic resistance in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of induced systemic resistance in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of induced systemic resistance in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of induced systemic resistance in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of induced systemic resistance in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of induced systemic resistance in other organism during symbiotic interaction
id: GO:0052532
in_subset: gosubset prok

positive regulation by symbiont of host induced systemic resistance
type: Class
subclass of: modulation by symbiont of host induced systemic resistance
subclass of: positive regulation by symbiont of host defense response
subclass of: positive regulation by organism of induced systemic resistance in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of induced systemic resistance in host
has_exact_synonym: up regulation by symbiont of induced systemic resistance in host
has_exact_synonym: up-regulation by symbiont of induced systemic resistance in host
has_exact_synonym: upregulation by symbiont of induced systemic resistance in host
has_narrow_synonym: activation by symbiont of induced systemic resistance in host
has_narrow_synonym: stimulation by symbiont of induced systemic resistance in host
has_obo_namespace: biological_process
id: GO:0052533
in_subset: gosubset prok

positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of innate immune response in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of systemic acquired resistance organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance, in a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of systemic acquired resistance in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of systemic acquired resistance in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of systemic acquired resistance in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of systemic acquired resistance in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of systemic acquired resistance in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of systemic acquired resistance in other organism during symbiotic interaction
id: GO:0052535
in_subset: gosubset prok

positive regulation by symbiont of host systemic acquired resistance
type: Class
subclass of: modulation by symbiont of host systemic acquired resistance
subclass of: positive regulation by symbiont of host defense response
subclass of: positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction
subclass of: positive regulation by symbiont of host immune response
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of systemic acquired resistance in host
has_exact_synonym: up regulation by symbiont of systemic acquired resistance in host
has_exact_synonym: up-regulation by symbiont of systemic acquired resistance in host
has_exact_synonym: upregulation by symbiont of systemic acquired resistance in host
has_narrow_synonym: activation by symbiont of systemic acquired resistance in host
has_narrow_synonym: stimulation by symbiont of systemic acquired resistance in host
has_obo_namespace: biological_process
id: GO:0052537
in_subset: gosubset prok

positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
subclass of: positive regulation by organism of defense response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the thickening of cell walls that occurs as part of the defense response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_narrow_synonym: activation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_related_synonym: positive regulation by organism of defensive cell wall thickening in other organism during symbiotic interaction
has_related_synonym: up regulation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
has_related_synonym: upregulation by organism of defense-related cell wall thickening in other organism during symbiotic interaction
id: GO:0052538
in_subset: gosubset prok

positive regulation by symbiont of defense-related host cell wall thickening
type: Class
subclass of: modulation by symbiont of defense-related host cell wall thickening
subclass of: positive regulation by symbiont of host defense response
subclass of: positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of a host process resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by organism of host defensive cell wall thickening
has_exact_synonym: up regulation by symbiont of defense-related host cell wall thickening
has_exact_synonym: up-regulation by symbiont of defense-related host cell wall thickening
has_exact_synonym: upregulation by symbiont of defense-related host cell wall thickening
has_narrow_synonym: activation by symbiont of defense-related host cell wall thickening
has_narrow_synonym: stimulation by symbiont of defense-related host cell wall thickening
has_obo_namespace: biological_process
id: GO:0052539
in_subset: gosubset prok

response to phytoalexin production by other organism involved in symbiotic interaction
type: Class
subclass of: response to immune response of other organism involved in symbiotic interaction
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of phytoalexins produced as a defense response by a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response to phytoalexin production by other organism during symbiotic interaction
id: GO:0052549

response to defense-related reactive oxygen species production by other organism involved in symbiotic interaction
type: Class
subclass of: response to immune response of other organism involved in symbiotic interaction
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as a defense response by a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response to defense-related reactive oxygen species production by other organism during symbiotic interaction
id: GO:0052550

response to defense-related nitric oxide production by other organism involved in symbiotic interaction
type: Class
subclass of: response to immune response of other organism involved in symbiotic interaction
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as a defense response by a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response to defense-related nitric oxide production by other organism during symbiotic interaction
id: GO:0052551

modulation by organism of immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of defense response of other organism involved in symbiotic interaction
subclass of: response to immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism modulates the frequency, rate or extent of the immune response of a second organism, where the two organisms are in a symbiotic interaction. The immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: modulation by organism of immune response of other organism during symbiotic interaction
id: GO:0052552
in_subset: gosubset prok

modulation by symbiont of host immune response
type: Class
subclass of: modulation by symbiont of host defense response
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
subclass of: response to host immune response
definition: Any process in which an organism modulates the frequency, rate or extent of the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052553
in_subset: gosubset prok

positive regulation by organism of immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the immune response of a second organism, where the two organisms are in a symbiotic interaction. The immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
imported from: go.owl
has_narrow_synonym: activation by organism of immune response of other organism during symbiotic interaction
has_narrow_synonym: stimulation by organism of immune response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: positive regulation by organism of immune response of other organism during symbiotic interaction
has_related_synonym: up regulation by organism of immune response of other organism during symbiotic interaction
has_related_synonym: up-regulation by organism of immune response of other organism during symbiotic interaction
has_related_synonym: upregulation by organism of immune response of other organism during symbiotic interaction
id: GO:0052555
in_subset: gosubset prok

positive regulation by symbiont of host immune response
type: Class
subclass of: modulation by symbiont of host immune response
subclass of: positive regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: up regulation by symbiont of host immune response
has_exact_synonym: up-regulation by symbiont of host immune response
has_exact_synonym: upregulation by symbiont of host immune response
has_narrow_synonym: activation by symbiont of host immune response
has_narrow_synonym: stimulation by symbiont of host immune response
has_obo_namespace: biological_process
id: GO:0052556
in_subset: gosubset prok

induction by organism of immune response of other organism involved in symbiotic interaction
type: Class
subclass of: positive regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates the immune response of a second organism, where the two organisms are in a symbiotic interaction. The immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
imported from: go.owl
has_exact_synonym: activation by organism of immune response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: induction by organism of immune response of other organism during symbiotic interaction
id: GO:0052558
in_subset: gosubset prok

induction by symbiont of host immune response
type: Class
subclass of: positive regulation by symbiont of host immune response
subclass of: induction by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism activates the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052559
in_subset: gosubset prok

negative regulation by organism of immune response of other organism involved in symbiotic interaction
type: Class
subclass of: modulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the immune response of a second organism, where the two organisms are in a symbiotic interaction. The immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
imported from: go.owl
has_narrow_synonym: inhibition by organism of immune response of other organism during symbiotic interaction
has_obo_namespace: biological_process
has_related_synonym: down regulation by organism of immune response of other organism during symbiotic interaction
has_related_synonym: down-regulation by organism of immune response of other organism during symbiotic interaction
has_related_synonym: downregulation by organism of immune response of other organism during symbiotic interaction
has_related_synonym: negative regulation by organism of immune response of other organism during symbiotic interaction
id: GO:0052561
in_subset: gosubset prok

negative regulation by symbiont of host immune response
type: Class
subclass of: modulation by symbiont of host immune response
subclass of: negative regulation by organism of immune response of other organism involved in symbiotic interaction
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: down regulation by symbiont of host immune response
has_exact_synonym: down-regulation by symbiont of host immune response
has_exact_synonym: downregulation by symbiont of host immune response
has_narrow_synonym: inhibition by symbiont of host immune response
has_obo_namespace: biological_process
id: GO:0052562
in_subset: gosubset prok

response to immune response of other organism involved in symbiotic interaction
type: Class
subclass of: response to defenses of other organism involved in symbiotic interaction
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the immune response of a second organism, where the two organisms are in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response to immune response of other organism during symbiotic interaction
id: GO:0052564
in_subset: gosubset prok

response to defense-related host nitric oxide production
type: Class
subclass of: response to defense-related nitric oxide production by other organism involved in symbiotic interaction
subclass of: response to host immune response
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052565

response to host phytoalexin production
type: Class
subclass of: response to phytoalexin production by other organism involved in symbiotic interaction
subclass of: response to host immune response
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of phytoalexins produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052566

response to defense-related host reactive oxygen species production
type: Class
subclass of: response to defense-related reactive oxygen species production by other organism involved in symbiotic interaction
subclass of: response to host immune response
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052567

response to host immune response
type: Class
subclass of: response to host defenses
subclass of: response to immune response of other organism involved in symbiotic interaction
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0052572
in_subset: gosubset prok

embryonic process involved in female pregnancy
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060136

positive regulation of apoptotic process by virus
type: Class
subclass of: modulation by virus of host process
subclass of: positive regulation by symbiont of host apoptotic process
definition: Any viral process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
imported from: go.owl
has_narrow_synonym: positive regulation of apoptosis by virus
has_obo_namespace: biological_process
id: GO:0060139

positive regulation of syncytium formation by virus
type: Class
subclass of: modulation by virus of host process
definition: The process in which a virus increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.
imported from: go.owl
has_exact_synonym: syncytium formation induced by viral infection
has_obo_namespace: biological_process
id: GO:0060141

host cellular process involved in virus induced gene silencing
type: Class
subclass of: interaction with symbiont
definition: A cellular process occurring in the host cell that contributes to the process of posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060144

modulation by virus of host cell cycle
type: Class
subclass of: modulation by virus of host process
subclass of: modulation by symbiont of host cell cycle
definition: Any viral process that modulates the rate or extent of progression through the cell cycle.
imported from: go.owl
database_cross_reference: VZ:1636
has_exact_synonym: modulation of host cell cycle by virus
has_exact_synonym: regulation by virus of host cell cycle
has_exact_synonym: regulation of host cell cycle by virus
has_exact_synonym: viral process regulating host cell cycle
has_obo_namespace: biological_process
id: GO:0060153
in_subset: goslim virus

cellular process regulating host cell cycle in response to virus
type: Class
subclass of: cellular response to virus
definition: Any cellular process that modulates the rate or extent of progression through the cell cycle in response to a virus.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060154

male mating behavior
type: Class
subclass of: multicellular organismal reproductive behavior
definition: The specific behavior of a male organism that is associated with reproduction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060179

female mating behavior
type: Class
subclass of: multicellular organismal reproductive behavior
definition: The specific behavior of a female organism that is associated with reproduction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060180

maintenance of stationary phase
type: Class
subclass of: homeostasis of number of cells in a free-living population
definition: The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction. Stationary phase can be in response to limited nutrients or a build-up of toxic substances in the environment.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060274

maintenance of stationary phase in response to starvation
type: Class
subclass of: maintenance of stationary phase
definition: The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to limited nutrients in the environment.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060275

maintenance of stationary phase in response to toxin
type: Class
subclass of: maintenance of stationary phase
definition: The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to a build-up of toxins in the environment.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060276

regulation of brood size
type: Class
subclass of: multi-organism reproductive process
subclass of: multi-multicellular organism process
definition: Any process that modulates the extent of brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060378

post-mating oviposition
type: Class
subclass of: oviposition
definition: The deposition of eggs, either fertilized or not, upon a surface or into a medium, following mating.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0060403

parental behavior
type: Class
subclass of: multicellular organismal reproductive behavior
definition: A reproductive behavior in which a parent cares for and rears offspring.
imported from: go.owl
created by: dph
creation date: 2009-06-22T09:05:26Z
has_obo_namespace: biological_process
id: GO:0060746

oral incubation
type: Class
subclass of: parental behavior
definition: A parental behavior in which fertilized eggs are taken into the mouth and held until hatching.
imported from: go.owl
created by: dph
creation date: 2009-06-22T09:08:58Z
has_obo_namespace: biological_process
id: GO:0060747

migration of symbiont within host by polymerization of host actin
type: Class
subclass of: migration in host
definition: The directional movement of an organism, usually a bacterial cell, from one place to another within its host organism, by a process involving continuous polymerization of host actin at one pole of the symbiont cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0070360
in_subset: gosubset prok

neutrophil mediated killing of symbiont cell
type: Class
subclass of: killing by host of symbiont cells
definition: The directed killing of a symbiont target cell by a neutrophil.
imported from: go.owl
created by: midori
creation date: 2009-10-01T01:52:03Z
has_obo_namespace: biological_process
id: GO:0070943

neutrophil mediated killing of bacterium
type: Class
subclass of: neutrophil mediated killing of symbiont cell
definition: The directed killing of a bacterium by a neutrophil.
imported from: go.owl
created by: midori
creation date: 2009-10-01T01:55:56Z
has_obo_namespace: biological_process
id: GO:0070944

neutrophil mediated killing of gram-negative bacterium
type: Class
subclass of: neutrophil mediated killing of bacterium
definition: The directed killing of a gram-negative bacterium by a neutrophil.
imported from: go.owl
created by: midori
creation date: 2009-10-01T01:59:12Z
has_obo_namespace: biological_process
id: GO:0070945

neutrophil mediated killing of gram-positive bacterium
type: Class
subclass of: neutrophil mediated killing of bacterium
definition: The directed killing of a gram-positive bacterium by a neutrophil.
imported from: go.owl
created by: midori
creation date: 2009-10-01T02:04:15Z
has_obo_namespace: biological_process
id: GO:0070946

neutrophil mediated killing of fungus
type: Class
subclass of: neutrophil mediated killing of symbiont cell
definition: The directed killing of a fungal cell by a neutrophil.
imported from: go.owl
created by: midori
creation date: 2009-10-01T02:07:44Z
has_obo_namespace: biological_process
id: GO:0070947

parasitism
type: Class
subclass of: symbiosis, encompassing mutualism through parasitism
definition: An interaction between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms.
imported from: go.owl
created by: midori
creation date: 2010-12-30T12:10:35Z
has_obo_namespace: biological_process
id: GO:0072519

response to host osmotic environment
type: Class
subclass of: response to host
definition: Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the osmotic conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: response of symbiont to host osmotic environment
has_obo_namespace: biological_process
id: GO:0075000

adhesion of symbiont infection structure to host
type: Class
subclass of: adhesion to host
definition: The attachment of an infection structure of the symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: adhesion of symbiont infection structure to host during symbiotic interaction
has_exact_synonym: attachment of symbiont infection structure to host
has_obo_namespace: biological_process
id: GO:0075001
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products of the symbiont involved in this process.

adhesion of symbiont germination tube to host
type: Class
subclass of: adhesion of symbiont infection structure to host
definition: The attachment of a germination tube of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: adhesion of symbiont germination tube to host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075002
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

adhesion of symbiont appressorium to host
type: Class
subclass of: adhesion of symbiont infection structure to host
definition: The attachment of an appressorium of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: adhesion of symbiont appressorium to host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075003
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

adhesion of symbiont spore to host
type: Class
subclass of: adhesion to host
definition: The attachment of a spore of the symbiont to its host via adhesion molecules, general stickiness etc. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: adhesion of symbiont spore to host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075004
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

spore germination on or near host
type: Class
subclass of: development of symbiont on or near host
subclass of: interaction with host
definition: The physiological, developmental and morphological changes that occur in a symbiont spore following release from dormancy up to the earliest signs of growth occurring on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075005
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

germ tube formation on or near host
type: Class
subclass of: development of symbiont on or near host
definition: Development of slender tubular outgrowth first produced by most symbiont spores immediately following germination on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075009
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

formation of infection structure on or near host
type: Class
subclass of: development of symbiont involved in interaction with host
definition: The process in which a symbiont structure that serves to infect the host is formed on or near its host organism. It includes physiological, developmental, and morphological changes of the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: formation by symbiont of infection structure on or near host
has_obo_namespace: biological_process
id: GO:0075015
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products of the symbiont involved in this process.

appressorium formation on or near host
type: Class
subclass of: development of symbiont on or near host phyllosphere
subclass of: formation of infection structure on or near host
definition: The process in which a swollen, flattened portion of a symbiont filament is formed on or near its host organism, to adhere to and for the purpose of penetrating the host surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: appressorium formation for entry into host, on or near host
has_exact_synonym: formation of an appressorium by symbiont on or near host
has_obo_namespace: biological_process
id: GO:0075016
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

initiation of appressorium on or near host
type: Class
subclass of: development involved in symbiotic interaction
definition: The process in which a relatively unspecialized cell starts to acquire specialized features of the symbiont appressorium to aid in infection of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: appressorium initiation on or near host
has_exact_synonym: initiation of appressorium by symbiont on or near host
has_exact_synonym: initiation of symbiont appressorium on or near host
has_obo_namespace: biological_process
id: GO:0075025
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

formation of symbiont germ tube hook structure on or near host
type: Class
subclass of: formation of infection structure on or near host
definition: The development of a swollen tip at the growing end of a symbiont spore which usually flattens against the host cell surface prior to appressorium formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: formation of germ tube tip of symbiont on or near the exterior of host
has_exact_synonym: symbiont germ tube hook structure formation on or near host
has_obo_namespace: biological_process
id: GO:0075029
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

septum formation involved in appressorium formation on or near host
type: Class
subclass of: development of symbiont on or near host
definition: The process in which a symbiont partition is formed to separate the appressorium from the germination tube, occurring on or near the exterior of its host organism during appressorium formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: septum formation during appressorium formation on or near host
id: GO:0075033
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

maturation of appressorium on or near host
type: Class
subclass of: development of symbiont involved in interaction with host
definition: The process in which specialized features of the symbiont appressorium are acquired post initiation, to aid in infection of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: appressorium maturation on or near host
has_exact_synonym: maturation of symbiont appressorium on or near host
has_obo_namespace: biological_process
id: GO:0075035
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

establishment of turgor in appressorium
type: Class
subclass of: development of symbiont involved in interaction with host
definition: The process in which hydrostatic pressure is increased within the symbiont appressorium to breach the cuticle of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: establishment of turgor in symbiont appressorium on or near host
has_exact_synonym: formation of turgor in appressorium
has_exact_synonym: generation of turgor in appressorium
has_obo_namespace: biological_process
id: GO:0075039
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

entry into host via a specialized structure
type: Class
subclass of: entry into host
definition: Penetration via a specialized structure of symbiont into the body, tissues, or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: entry into host via a specialized structure during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075052
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

formation of symbiont penetration peg for entry into host
type: Class
subclass of: formation of infection structure on or near host
definition: The assembly by the symbiont of a peg-like structure for the purpose of penetration into its host organism, which penetrates through the host cuticle and epidermal cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: symbiont penetration peg formation for entry into host
has_obo_namespace: biological_process
id: GO:0075053
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

initiation of symbiont penetration peg
type: Class
subclass of: development involved in symbiotic interaction
definition: The process in which a relatively unspecialized cell of the symbiont starts to acquire the characteristics of a mature penetration peg to penetrate into its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: symbiont penetration peg initiation
has_obo_namespace: biological_process
id: GO:0075057
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

formation of symbiont invasive hypha in host
type: Class
subclass of: development of symbiont in host
definition: The assembly by the symbiont of a threadlike, tubular structure, which may contain multiple nuclei and may or may not be divided internally by septa or cross-walls, for the purpose of invasive growth within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: formation of symbiont invasive hypha within host
has_exact_synonym: formation of symbiont invasive hypha within host during symbiotic interaction
has_exact_synonym: symbiont invasive hypha formation within host
has_obo_namespace: biological_process
id: GO:0075061
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

adhesion of symbiont infection cushion to host
type: Class
subclass of: adhesion of symbiont infection structure to host
definition: The attachment of an infection cushion of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: adhesion of symbiont infection cushion to host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075069
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

adhesion of symbiont hyphopodium to host
type: Class
subclass of: adhesion of symbiont infection structure to host
definition: The attachment of a hyphopodium of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: adhesion of symbiont hyphopodium to host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075070
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

modulation by host of symbiont adenylate cyclase activity
type: Class
subclass of: modulation by host of symbiont catalytic activity
definition: Any process in which the host organism modulates the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075075
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host adenylate cyclase activity ; GO:0075106".

positive regulation by host of symbiont adenylate cyclase activity
type: Class
subclass of: positive regulation by host of symbiont catalytic activity
subclass of: modulation by host of symbiont adenylate cyclase activity
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075076
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host adenylate cyclase activity ; GO:0075107".

negative regulation by host of symbiont adenylate cyclase activity
type: Class
subclass of: negative regulation by host of symbiont catalytic activity
subclass of: modulation by host of symbiont adenylate cyclase activity
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075077
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host adenylate cyclase activity ; GO:0075108".

modulation by host of symbiont receptor-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont signal transduction pathway
definition: Any process in which the host organism modulates the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The receptor is defined as a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand) such as a neurotransmitter or a hormone or other substance, and initiates the cellular response to the ligand. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075078
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host receptor-mediated signal transduction ; GO:0075109".

positive regulation by host of symbiont receptor-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont receptor-mediated signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075079
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host receptor-mediated signal transduction ; GO:0075110".

negative regulation by host of symbiont receptor-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont receptor-mediated signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075080
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host receptor-mediated signal transduction ; GO:0075111".

modulation by host of symbiont transmembrane receptor-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont receptor-mediated signal transduction
definition: Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075081
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host transmembrane receptor-mediated signal transduction ; GO:0075112".

positive regulation by host of symbiont transmembrane receptor-mediated signal transduction
type: Class
subclass of: positive regulation by host of symbiont receptor-mediated signal transduction
subclass of: modulation by host of symbiont transmembrane receptor-mediated signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075082
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host transmembrane receptor-mediated signal transduction ; GO:0075113".

negative regulation by host of symbiont transmembrane receptor-mediated signal transduction
type: Class
subclass of: negative regulation by host of symbiont receptor-mediated signal transduction
subclass of: modulation by host of symbiont transmembrane receptor-mediated signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075083
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host transmembrane receptor-mediated signal transduction ; GO:0075114".

modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
type: Class
subclass of: modulation by host of symbiont transmembrane receptor-mediated signal transduction
subclass of: modulation by host of symbiont cAMP-mediated signal transduction
definition: Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by host of symbiont transmembrane receptor-mediated cAMP signaling
has_obo_namespace: biological_process
id: GO:0075084
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction ; GO:0075115".

positive regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
type: Class
subclass of: positive regulation by host of symbiont transmembrane receptor-mediated signal transduction
subclass of: modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
subclass of: positive regulation by host of symbiont cAMP-mediated signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by host of symbiont transmembrane receptor-mediated cAMP signaling
has_exact_synonym: promotion by host of symbiont transmembrane receptor protein activity involved in cAMP-mediated signal transduction
has_exact_synonym: upregulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
has_narrow_synonym: activation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
has_narrow_synonym: stimulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
has_obo_namespace: biological_process
id: GO:0075085
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction ; GO:0075116".

negative regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
type: Class
subclass of: negative regulation by host of symbiont transmembrane receptor-mediated signal transduction
subclass of: modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
subclass of: negative regulation by host of symbiont cAMP-mediated signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: downregulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction
has_exact_synonym: negative regulation by host of symbiont transmembrane receptor-mediated cAMP signaling
has_narrow_synonym: inhibition by host of symbiont transmembrane receptor-mediated cAMP signal transduction
has_obo_namespace: biological_process
id: GO:0075086
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction ; GO:0075117".

modulation by host of symbiont G-protein coupled receptor protein signal transduction
type: Class
subclass of: modulation by host of symbiont transmembrane receptor-mediated signal transduction
definition: Any process in which the host organism modulates the frequency, rate or extent of the symbiont G-protein coupled receptor protein signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075087
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host G-protein coupled receptor protein signal transduction ; GO:0075118".

positive regulation by host of symbiont G-protein coupled receptor protein signal transduction
type: Class
subclass of: positive regulation by host of symbiont transmembrane receptor-mediated signal transduction
subclass of: modulation by host of symbiont G-protein coupled receptor protein signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont G-protein coupled receptor protein signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075088
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host G-protein coupled receptor protein signal transduction ; GO:0075119".

negative regulation by host of symbiont G-protein coupled receptor protein signal transduction
type: Class
subclass of: negative regulation by host of symbiont transmembrane receptor-mediated signal transduction
subclass of: modulation by host of symbiont G-protein coupled receptor protein signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont G-protein coupled receptor protein signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075089
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host G-protein coupled receptor protein signal transduction ; GO:0075120".

modulation by host of symbiont signal transduction mediated by G-protein alpha subunit
type: Class
subclass of: modulation by host of symbiont G-protein coupled receptor protein signal transduction
definition: Any process in which the host organism modulates the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075090
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host signal transduction mediated by G-protein alpha subunit ; GO:0075121".

positive regulation by host of symbiont signal transduction mediated by G-protein alpha subunit
type: Class
subclass of: positive regulation by host of symbiont G-protein coupled receptor protein signal transduction
subclass of: modulation by host of symbiont signal transduction mediated by G-protein alpha subunit
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075091
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host signal transduction mediated by G-protein alpha subunit ; GO:0075122".

negative regulation by host of symbiont signal transduction mediated by G-protein alpha subunit
type: Class
subclass of: negative regulation by host of symbiont G-protein coupled receptor protein signal transduction
subclass of: modulation by host of symbiont signal transduction mediated by G-protein alpha subunit
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075092
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host signal transduction mediated by G-protein alpha subunit ; GO:0075123".

modulation by host of symbiont signal transduction mediated by G-protein beta subunit
type: Class
subclass of: modulation by host of symbiont G-protein coupled receptor protein signal transduction
definition: Any process in which the host organism modulates the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075093
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host signal transduction mediated by G-protein beta subunit ; GO:0075124".

positive regulation by host of symbiont signal transduction mediated by G-protein beta subunit
type: Class
subclass of: positive regulation by host of symbiont G-protein coupled receptor protein signal transduction
subclass of: modulation by host of symbiont signal transduction mediated by G-protein beta subunit
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075094
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host signal transduction mediated by G-protein beta subunit ; GO:0075125".

negative regulation by host of symbiont signal transduction mediated by G-protein beta subunit
type: Class
subclass of: negative regulation by host of symbiont G-protein coupled receptor protein signal transduction
subclass of: modulation by host of symbiont signal transduction mediated by G-protein beta subunit
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075095
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host signal transduction mediated by G-protein beta subunit ; GO:0075126".

modulation by host of symbiont signal transduction mediated by G-protein gamma subunit
type: Class
subclass of: modulation by host of symbiont G-protein coupled receptor protein signal transduction
definition: Any process in which the host organism modulates the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075096
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host signal transduction mediated by G-protein gamma subunit ; GO:0075127".

positive regulation by host of symbiont signal transduction mediated by G-protein gamma subunit
type: Class
subclass of: positive regulation by host of symbiont G-protein coupled receptor protein signal transduction
subclass of: modulation by host of symbiont signal transduction mediated by G-protein gamma subunit
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075097
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host signal transduction mediated by G-protein gamma subunit ; GO:0075128".

negative regulation by host of symbiont signal transduction mediated by G-protein gamma subunit
type: Class
subclass of: negative regulation by host of symbiont G-protein coupled receptor protein signal transduction
subclass of: modulation by host of symbiont signal transduction mediated by G-protein gamma subunit
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075098
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host signal transduction mediated by G-protein gamma subunit ; GO:0075129".

modulation by host of symbiont protein kinase-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont signal transduction pathway
definition: Any process in which the host organism modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075099
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host protein kinase-mediated signal transduction ; GO:0075130".

positive regulation by host of symbiont protein kinase-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont protein kinase-mediated signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075100
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host protein kinase-mediated signal transduction ; GO:0075131".

negative regulation by host of symbiont protein kinase-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont protein kinase-mediated signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075101
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host protein kinase-mediated signal transduction ; GO:0075132".

negative regulation by host of symbiont MAP kinase-mediated signal transduction
type: Class
subclass of: modulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway
subclass of: negative regulation by host of symbiont protein kinase-mediated signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont MAP kinase-mediated signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075102
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host MAP kinase-mediated signal transduction pathway ; GO:0052078".

modulation by host of symbiont calcium or calmodulin-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont signal transduction pathway
definition: Any process in which the host organism modulates the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by host of symbiont Ca++ or calmodulin-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0075103
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host calcium or calmodulin-mediated signal transduction ; GO:0075133".

positive regulation by host of symbiont calcium or calmodulin-mediated signal transduction
type: Class
subclass of: positive regulation by host of symbiont signal transduction pathway
subclass of: modulation by host of symbiont calcium or calmodulin-mediated signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by host of symbiont Ca++ or calmodulin-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0075104
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host calcium or calmodulin-mediated signal transduction ; GO:0075134".

negative regulation by host of symbiont calcium or calmodulin-mediated signal transduction
type: Class
subclass of: negative regulation by host of symbiont signal transduction pathway
subclass of: modulation by host of symbiont calcium or calmodulin-mediated signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by host of symbiont Ca++ or calmodulin-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0075105
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction ; GO:0075135".

modulation by symbiont of host adenylate cyclase activity
type: Class
subclass of: modulation by symbiont of host catalytic activity
definition: Any process in which the symbiont modulates the frequency, rate or extent of the host adenylate cyclase activity, which involves catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: Modulation by symbiont of host 3',5'-cyclic AMP synthetase activity
has_exact_synonym: Modulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity
has_exact_synonym: Modulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity
has_exact_synonym: Modulation by symbiont of host ATP pyrophosphate-lyase activity
has_exact_synonym: Modulation by symbiont of host adenyl cyclase activity
has_exact_synonym: Modulation by symbiont of host adenylyl cyclase activity
has_exact_synonym: Modulation by symbiont of host adenylylcyclase activity
has_obo_namespace: biological_process
has_related_synonym: Modulation by symbiont of host cAMP generating peptide activity
id: GO:0075106
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont adenylate cyclase activity ; GO:0075075".

positive regulation by symbiont of host adenylate cyclase activity
type: Class
subclass of: positive regulation by symbiont of host catalytic activity
subclass of: modulation by symbiont of host adenylate cyclase activity
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host adenylate cyclase activity, which involves catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: Positive regulation by symbiont of host 3',5'-cyclic AMP synthetase activity
has_exact_synonym: Positive regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity
has_exact_synonym: Positive regulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity
has_exact_synonym: Positive regulation by symbiont of host ATP pyrophosphate-lyase activity
has_exact_synonym: Positive regulation by symbiont of host adenyl cyclase activity
has_exact_synonym: Positive regulation by symbiont of host adenylyl cyclase activity
has_exact_synonym: Positive regulation by symbiont of host adenylylcyclase activity
has_obo_namespace: biological_process
has_related_synonym: Positive regulation by symbiont of host cAMP generating peptide activity
id: GO:0075107
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont adenylate cyclase activity ; GO:0075076".

negative regulation by symbiont of host adenylate cyclase activity
type: Class
subclass of: negative regulation by symbiont of host catalytic activity
subclass of: modulation by symbiont of host adenylate cyclase activity
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: Negative regulation by symbiont of host 3',5'-cyclic AMP synthetase activity
has_exact_synonym: Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity
has_exact_synonym: Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity
has_exact_synonym: Negative regulation by symbiont of host ATP pyrophosphate-lyase activity
has_exact_synonym: Negative regulation by symbiont of host adenyl cyclase activity
has_exact_synonym: Negative regulation by symbiont of host adenylyl cyclase activity
has_exact_synonym: Negative regulation by symbiont of host adenylylcyclase activity
has_obo_namespace: biological_process
has_related_synonym: Negative regulation by symbiont of host cAMP generating peptide activity
id: GO:0075108
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont adenylate cyclase activity ; GO:0075077".

modulation by symbiont of host receptor-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which the symbiont modulates the frequency, rate or extent of receptor-mediated signal transduction in the host organism. The receptor is defined as a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand) such as a neurotransmitter or a hormone or other substance, and initiates the cellular response to the ligand. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075109
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont receptor-mediated signal transduction ; GO:0075078".

positive regulation by symbiont of host receptor-mediated signal transduction
type: Class
subclass of: positive regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host receptor-mediated signal transduction
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075110
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont receptor-mediated signal transduction ; GO:0075079".

negative regulation by symbiont of host receptor-mediated signal transduction
type: Class
subclass of: negative regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host receptor-mediated signal transduction
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075111
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont receptor-mediated signal transduction ; GO:0075080".

modulation by symbiont of host transmembrane receptor-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host receptor-mediated signal transduction
definition: Any process in which the symbiont modulates the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075112
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont transmembrane receptor-mediated signal transduction ; GO:0075081".

positive regulation by symbiont of host transmembrane receptor-mediated signal transduction
type: Class
subclass of: positive regulation by symbiont of host receptor-mediated signal transduction
subclass of: modulation by symbiont of host transmembrane receptor-mediated signal transduction
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075113
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont transmembrane receptor-mediated signal transduction ; GO:0075082".

negative regulation by symbiont of host transmembrane receptor-mediated signal transduction
type: Class
subclass of: negative regulation by symbiont of host receptor-mediated signal transduction
subclass of: modulation by symbiont of host transmembrane receptor-mediated signal transduction
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075114
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont transmembrane receptor-mediated signal transduction ; GO:0075083".

modulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
type: Class
subclass of: modulation by symbiont of host transmembrane receptor-mediated signal transduction
subclass of: modulation by symbiont of host cAMP-mediated signal transduction
definition: Any process in which the symbiont modulates the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host transmembrane receptor-mediated cAMP signaling
has_obo_namespace: biological_process
id: GO:0075115
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction ; GO:0075084".

positive regulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
type: Class
subclass of: positive regulation by symbiont of host transmembrane receptor-mediated signal transduction
subclass of: modulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
subclass of: positive regulation by symbiont of host cAMP-mediated signal transduction
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of host transmembrane receptor-mediated cAMP signaling
has_exact_synonym: promotion by symbiont of host transmembrane receptor-mediated cAMP signal transduction
has_exact_synonym: upregulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
has_narrow_synonym: activation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
has_narrow_synonym: stimulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
has_obo_namespace: biological_process
id: GO:0075116
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction ; GO:0075085".

negative regulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
type: Class
subclass of: negative regulation by symbiont of host transmembrane receptor-mediated signal transduction
subclass of: modulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
subclass of: negative regulation by symbiont of host cAMP-mediated signal transduction
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: downregulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction
has_exact_synonym: negative regulation by symbiont of host transmembrane receptor-mediated cAMP signaling
has_narrow_synonym: inhibition by symbiont of host transmembrane receptor-mediated cAMP signal transduction
has_obo_namespace: biological_process
id: GO:0075117
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction ; GO:0075086".

modulation by symbiont of host G-protein coupled receptor protein signal transduction
type: Class
subclass of: modulation by symbiont of host transmembrane receptor-mediated signal transduction
definition: Any process in which the symbiont modulates the frequency, rate or extent of the host G-protein coupled receptor protein signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075118
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont G-protein coupled receptor protein signal transduction ; GO:0075087".

positive regulation by symbiont of host G-protein coupled receptor protein signal transduction
type: Class
subclass of: positive regulation by symbiont of host transmembrane receptor-mediated signal transduction
subclass of: modulation by symbiont of host G-protein coupled receptor protein signal transduction
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host G-protein coupled receptor protein signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075119
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by symbiont of host G-protein coupled receptor protein signal transduction ; GO:0075088".

negative regulation by symbiont of host G-protein coupled receptor protein signal transduction
type: Class
subclass of: negative regulation by symbiont of host transmembrane receptor-mediated signal transduction
subclass of: modulation by symbiont of host G-protein coupled receptor protein signal transduction
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host G-protein coupled receptor protein signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075120
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont G-protein coupled receptor protein signal transduction ; GO:0075089".

modulation by symbiont of host signal transduction mediated by G-protein alpha subunit
type: Class
subclass of: modulation by symbiont of host G-protein coupled receptor protein signal transduction
definition: Any process in which the symbiont modulates the frequency, rate or extent of the host signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075121
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont signal transduction mediated by G-protein alpha subunit ; GO:0075090".

positive regulation by symbiont of host signal transduction mediated by G-protein alpha subunit
type: Class
subclass of: positive regulation by symbiont of host G-protein coupled receptor protein signal transduction
subclass of: modulation by symbiont of host signal transduction mediated by G-protein alpha subunit
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075122
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont signal transduction mediated by G-protein alpha subunit ; GO:0075091".

negative regulation by symbiont of host signal transduction mediated by G-protein alpha subunit
type: Class
subclass of: negative regulation by symbiont of host G-protein coupled receptor protein signal transduction
subclass of: modulation by symbiont of host signal transduction mediated by G-protein alpha subunit
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075123
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont signal transduction mediated by G-protein alpha subunit ; GO:0075092".

modulation by symbiont of host signal transduction mediated by G-protein beta subunit
type: Class
subclass of: modulation by symbiont of host G-protein coupled receptor protein signal transduction
definition: Any process in which the symbiont modulates the frequency, rate or extent of the host signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075124
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont signal transduction mediated by G-protein beta subunit ; GO:0075093".

positive regulation by symbiont of host signal transduction mediated by G-protein beta subunit
type: Class
subclass of: positive regulation by symbiont of host G-protein coupled receptor protein signal transduction
subclass of: modulation by symbiont of host signal transduction mediated by G-protein beta subunit
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075125
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont signal transduction mediated by G-protein beta subunit ; GO:0075094".

negative regulation by symbiont of host signal transduction mediated by G-protein beta subunit
type: Class
subclass of: negative regulation by symbiont of host G-protein coupled receptor protein signal transduction
subclass of: modulation by symbiont of host signal transduction mediated by G-protein beta subunit
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075126
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont signal transduction mediated by G-protein beta subunit ; GO:0075095".

modulation by symbiont of host signal transduction mediated by G-protein gamma subunit
type: Class
subclass of: modulation by symbiont of host G-protein coupled receptor protein signal transduction
definition: Any process in which the symbiont modulates the frequency, rate or extent of the host signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075127
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont signal transduction mediated by G-protein gamma subunit ; GO:0075096".

positive regulation by symbiont of host signal transduction mediated by G-protein gamma subunit
type: Class
subclass of: positive regulation by symbiont of host G-protein coupled receptor protein signal transduction
subclass of: modulation by symbiont of host signal transduction mediated by G-protein gamma subunit
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075128
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont signal transduction mediated by G-protein gamma subunit ; GO:0075097".

negative regulation by symbiont of host signal transduction mediated by G-protein gamma subunit
type: Class
subclass of: negative regulation by symbiont of host G-protein coupled receptor protein signal transduction
subclass of: modulation by symbiont of host signal transduction mediated by G-protein gamma subunit
definition: Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075129
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont signal transduction mediated by G-protein gamma subunit ; GO:0075098".

modulation by symbiont of host protein kinase-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which the symbiont modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075130
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont protein kinase-mediated signal transduction ; GO:0075099".

positive regulation by symbiont of host protein kinase-mediated signal transduction
type: Class
subclass of: positive regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host protein kinase-mediated signal transduction
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075131
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont protein kinase-mediated signal transduction ; GO:0075100".

negative regulation by symbiont of host protein kinase-mediated signal transduction
type: Class
subclass of: negative regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host protein kinase-mediated signal transduction
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075132
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "negative regulation by host of symbiont protein kinase-mediated signal transduction ; GO:0075101".

modulation by symbiont of host calcium or calmodulin-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which the symbiont modulates the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host Ca++ or calmodulin-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0075133
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont calcium or calmodulin-mediated signal transduction ; GO:0075103".

positive regulation by symbiont of host calcium or calmodulin-mediated signal transduction
type: Class
subclass of: positive regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host calcium or calmodulin-mediated signal transduction
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0075134
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont calcium or calmodulin-mediated signal transduction ; GO:0075104".

negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction
type: Class
subclass of: negative regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host calcium or calmodulin-mediated signal transduction
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction
has_obo_namespace: biological_process
id: GO:0075135
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "Negative regulation by host of symbiont calcium or calmodulin-mediated signal transduction ; GO:0075105".

response to host
type: Class
subclass of: interaction with host
subclass of: response to other organism
definition: Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: response of symbiont to host
id: GO:0075136
in_subset: gosubset prok
comment: Note that this term is used to annotate gene products of the symbiont.

response to host redox environment
type: Class
subclass of: response to host
definition: Any process that results in a change in state or activity of the symbiont organism or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the redox environment in host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: response of symbiont to host redox environment
has_obo_namespace: biological_process
id: GO:0075137
comment: Note that this term is used to annotate gene products of the symbiont.

response to host oxygen tension environment
type: Class
subclass of: response to host
definition: Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting oxygen tension in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: response of symbiont to host oxygen tension environment
has_obo_namespace: biological_process
id: GO:0075138
comment: Note that this term is used to annotate gene products of the symbiont.

response to host iron concentration
type: Class
subclass of: response to host
definition: Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting iron concentration in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: response of symbiont to host iron concentration
has_obo_namespace: biological_process
id: GO:0075139
comment: Note that this term is used to annotate gene products of the symbiont.

response to host defense molecules
type: Class
subclass of: response to host
definition: Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting host defense molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: response of symbiont to host defense molecules
has_obo_namespace: biological_process
id: GO:0075140
comment: Note that this term is used to annotate gene products of the symbiont.

maintenance of symbiont tolerance to host environment
type: Class
subclass of: response to host
definition: Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against the components of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075141
comment: Note that this term is used to annotate gene products of the symbiont.

maintenance of symbiont tolerance to host oxygen tension environment
type: Class
subclass of: response to host oxygen tension environment
subclass of: maintenance of symbiont tolerance to host environment
definition: Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against oxygen tension environment of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075142
comment: Note that this term is used to annotate gene products of the symbiont.

maintenance of symbiont tolerance to host redox environment
type: Class
subclass of: response to host redox environment
subclass of: maintenance of symbiont tolerance to host environment
definition: Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against redox environment of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075143
comment: Note that this term is used to annotate gene products of the symbiont.

maintenance of symbiont tolerance to host iron concentration
type: Class
subclass of: response to host iron concentration
subclass of: maintenance of symbiont tolerance to host environment
definition: Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against iron concentration environment of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075144
comment: Note that this term is used to annotate gene products of the symbiont.

maintenance of symbiont tolerance to host defense molecules
type: Class
subclass of: response to host defense molecules
subclass of: maintenance of symbiont tolerance to host environment
definition: Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against defense molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075145
comment: Note that this term is used to annotate gene products of the symbiont.

maintenance of symbiont tolerance to host osmotic environment
type: Class
subclass of: response to host osmotic environment
subclass of: maintenance of symbiont tolerance to host environment
definition: Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against osmotic environment of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075146
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of signal transduction in response to host
type: Class
subclass of: response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075147
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of signal transduction in response to host
type: Class
subclass of: regulation of signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075148
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of signal transduction in response to host
type: Class
subclass of: regulation of signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075149
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of receptor-mediated signal transduction in response to host
type: Class
subclass of: regulation of signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont receptor-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075150
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of receptor-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of signal transduction in response to host
subclass of: regulation of receptor-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont receptor-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075151
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of receptor-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of signal transduction in response to host
subclass of: regulation of receptor-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont receptor-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075152
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of transmembrane receptor-mediated signal transduction in response to host
type: Class
subclass of: regulation of receptor-mediated signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont transmembrane receptor-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075153
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of transmembrane receptor-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of receptor-mediated signal transduction in response to host
subclass of: regulation of transmembrane receptor-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont transmembrane receptor-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075154
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of transmembrane receptor-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of receptor-mediated signal transduction in response to host
subclass of: regulation of transmembrane receptor-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont transmembrane receptor-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075155
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of G-protein coupled receptor protein signaling pathway in response to host
type: Class
subclass of: regulation of transmembrane receptor-mediated signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein coupled receptor protein-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of G-protein coupled receptor protein signalling pathway in response to host
has_exact_synonym: regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075156
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of G-protein coupled receptor protein signaling pathway in response to host
type: Class
subclass of: positive regulation of transmembrane receptor-mediated signal transduction in response to host
subclass of: regulation of G-protein coupled receptor protein signaling pathway in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein coupled receptor protein-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of G-protein coupled receptor protein signalling pathway in response to host
has_exact_synonym: positive regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075157
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of G-protein coupled receptor protein signaling pathway in response to host
type: Class
subclass of: negative regulation of transmembrane receptor-mediated signal transduction in response to host
subclass of: regulation of G-protein coupled receptor protein signaling pathway in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein coupled receptor protein-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of G-protein coupled receptor protein signalling pathway in response to host
has_exact_synonym: negative regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075158
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of G-protein alpha subunit-mediated signal transduction in response to host
type: Class
subclass of: regulation of G-protein coupled receptor protein signaling pathway in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075159
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of G-protein alpha subunit-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of G-protein coupled receptor protein signaling pathway in response to host
subclass of: regulation of G-protein alpha subunit-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075160
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of G-protein alpha subunit-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of G-protein coupled receptor protein signaling pathway in response to host
subclass of: regulation of G-protein alpha subunit-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075161
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of G-protein beta subunit-mediated signal transduction in response to host
type: Class
subclass of: regulation of G-protein coupled receptor protein signaling pathway in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075162
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of G-protein beta subunit-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of G-protein coupled receptor protein signaling pathway in response to host
subclass of: regulation of G-protein beta subunit-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075163
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of G-protein beta subunit-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of G-protein coupled receptor protein signaling pathway in response to host
subclass of: regulation of G-protein beta subunit-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075164
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of G-protein gamma subunit-mediated signal transduction in response to host
type: Class
subclass of: regulation of G-protein coupled receptor protein signaling pathway in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075165
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of G-protein gamma subunit-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of G-protein coupled receptor protein signaling pathway in response to host
subclass of: regulation of G-protein gamma subunit-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075166
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of G-protein gamma subunit-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of G-protein coupled receptor protein signaling pathway in response to host
subclass of: regulation of G-protein gamma subunit-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075167
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of protein kinase-mediated signal transduction in response to host
type: Class
subclass of: regulation of signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont protein kinase-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075168
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of symbiont protein kinase-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of signal transduction in response to host
subclass of: regulation of protein kinase-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075169
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of protein kinase-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of signal transduction in response to host
subclass of: regulation of protein kinase-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont protein kinase-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075170
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of MAP kinase-mediated signal transduction in response to host
type: Class
subclass of: regulation of protein kinase-mediated signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its MAP kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont MAP kinase-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075171
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of MAP kinase-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of symbiont protein kinase-mediated signal transduction in response to host
subclass of: regulation of MAP kinase-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its MAP kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont MAP kinase-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075172
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of MAP kinase-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of protein kinase-mediated signal transduction in response to host
subclass of: regulation of MAP kinase-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont MAP kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont MAP kinase-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075173
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of cAMP-mediated signaling in response to host
type: Class
subclass of: regulation of signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of cAMP-mediated signal transduction in response to host
has_exact_synonym: regulation of cAMP-mediated signalling in response to host
has_exact_synonym: regulation of symbiont cAMP-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075174
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of cAMP-mediated signaling in response to host
type: Class
subclass of: positive regulation of signal transduction in response to host
subclass of: regulation of cAMP-mediated signaling in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of cAMP-mediated signal transduction in response to host
has_exact_synonym: positive regulation of cAMP-mediated signalling in response to host
has_exact_synonym: positive regulation of symbiont cAMP-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075175
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of cAMP-mediated signaling in response to host
type: Class
subclass of: negative regulation of signal transduction in response to host
subclass of: regulation of cAMP-mediated signaling in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of cAMP-mediated signal transduction in response to host
has_exact_synonym: negative regulation of cAMP-mediated signalling in response to host
has_exact_synonym: negative regulation of symbiont cAMP-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075176
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of calcium or calmodulin-mediated signal transduction in response to host
type: Class
subclass of: regulation of signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host
has_exact_synonym: modulation of symbiont calcium or calmodulin-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075177
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of calcium or calmodulin-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of signal transduction in response to host
subclass of: regulation of calcium or calmodulin-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host
has_exact_synonym: positive regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075178
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of calcium or calmodulin-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of signal transduction in response to host
subclass of: regulation of calcium or calmodulin-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host
has_exact_synonym: negative regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075179
comment: Note that this term is used to annotate gene products of the symbiont.

regulation of transcription in response to host
type: Class
subclass of: response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its transcription as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont transcription in response to host
has_obo_namespace: biological_process
id: GO:0075180
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of symbiont transcription in response to host
type: Class
subclass of: regulation of transcription in response to host
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of its transcription as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075181
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of symbiont transcription in response to host
type: Class
subclass of: regulation of transcription in response to host
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of its transcription as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075182
comment: Note that this term is used to annotate gene products of the symbiont.

infection cushion formation on or near host
type: Class
subclass of: formation of infection structure on or near host
definition: The process in which an organized mass of hyphae is formed on or near the host organism, and numerous infective hyphae develop from the hyphae mass. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075183
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

hyphopodium formation on or near host
type: Class
subclass of: formation of infection structure on or near host
definition: The process in which a specialized structure, consisted of stalked, thick-walled, lobed cells of vegetative epiphytic hyphae, is formed, to attach and penetrate the host surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075187
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

haustorium mother cell formation on or near host
type: Class
subclass of: formation of infection structure on or near host
definition: The process in which a symbiont cell is formed on or near its host organism, via separated from the tip of an infection hypha by a septum. The haustorium mother cell usually contains 2-4 fungal nuclei, and its function is to attach and penetrate the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075192
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

adhesion of symbiont haustorium mother cell to host
type: Class
subclass of: adhesion of symbiont infection structure to host
definition: The attachment of a haustorium mother cell of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: adhesion of symbiont haustorium mother cell to host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075196
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

formation of symbiont haustorium neck for entry into host
type: Class
subclass of: formation of infection structure on or near host
definition: The assembly by the symbiont of a neck-like structure for the purpose of penetration into its host organism. The neck-like structure connects haustorium mother cell and haustorium. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: symbiont haustorium neck formation for entry into host
has_obo_namespace: biological_process
id: GO:0075197
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

formation of symbiont penetration hypha for entry into host
type: Class
subclass of: formation of infection structure on or near host
definition: The assembly by the symbiont of a threadlike, tubular structure, which may contain multiple nuclei and may or may not be divided internally by septa or cross-walls, for the purpose of penetration into its host organism. In the case of an appressorium existing, this term is defined in further details as the process in which the symbiont penetration peg expands to form a hypha which traverses the epidermal cell and emerges into the intercellular space of the mesophyll tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: symbiont penetration hypha formation for entry into host
has_obo_namespace: biological_process
id: GO:0075201
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

modulation by host of symbiont cAMP-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont signal transduction pathway
definition: Any process in which the host organism modulates the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The cAMP-mediated signal transduction is defined as a series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by host of symbiont cAMP-mediated signalling
has_exact_synonym: regulation by host of symbiont cAMP-mediated signaling
has_obo_namespace: biological_process
has_related_synonym: modulation by host of symbiont cAMP-mediated signaling
id: GO:0075205
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host cAMP-mediated signal transduction ; GO:0075208".

positive regulation by host of symbiont cAMP-mediated signal transduction
type: Class
subclass of: positive regulation by host of symbiont signal transduction pathway
subclass of: modulation by host of symbiont cAMP-mediated signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by host of symbiont cAMP-mediated signaling
has_obo_namespace: biological_process
id: GO:0075206
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host cAMP-mediated signal transduction ; GO:0075209".

negative regulation by host of symbiont cAMP-mediated signal transduction
type: Class
subclass of: negative regulation by host of symbiont signal transduction pathway
subclass of: modulation by host of symbiont cAMP-mediated signal transduction
definition: Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by host of symbiont cAMP-mediated signaling
has_obo_namespace: biological_process
id: GO:0075207
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "negative regulation by symbiont of host cAMP-mediated signal transduction ; GO:0075210".

modulation by symbiont of host cAMP-mediated signal transduction
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which the symbiont modulates the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modulation by symbiont of host cAMP-mediated signaling
has_obo_namespace: biological_process
id: GO:0075208
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "modulation by host of symbiont cAMP-mediated signal transduction ; GO:0075205".

positive regulation by symbiont of host cAMP-mediated signal transduction
type: Class
subclass of: positive regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host cAMP-mediated signal transduction
definition: Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: positive regulation by symbiont of host cAMP-mediated signaling
has_obo_namespace: biological_process
id: GO:0075209
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "positive regulation by host of symbiont cAMP-mediated signal transduction ; GO:0075206".

negative regulation by symbiont of host cAMP-mediated signal transduction
type: Class
subclass of: negative regulation by symbiont of host signal transduction pathway
subclass of: modulation by symbiont of host cAMP-mediated signal transduction
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation by symbiont of host cAMP-mediated signaling
has_obo_namespace: biological_process
id: GO:0075210
comment: Note that this term is used to annotate gene products of the symbiont. To annotate host gene products, consider the biological process term "Negative regulation by host of symbiont cAMP-mediated signal transduction ; GO:0075207".

regulation of transmembrane receptor-mediated cAMP signaling in response to host
type: Class
subclass of: regulation of transmembrane receptor-mediated signal transduction in response to host
subclass of: regulation of cAMP-mediated signaling in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host
has_exact_synonym: regulation of transmembrane receptor-mediated cAMP signal transduction in response to host
has_exact_synonym: regulation of transmembrane receptor-mediated cAMP signalling in response to host
has_obo_namespace: biological_process
id: GO:0075211
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of transmembrane receptor-mediated cAMP signal transduction in response to host
type: Class
subclass of: positive regulation of transmembrane receptor-mediated signal transduction in response to host
subclass of: positive regulation of cAMP-mediated signaling in response to host
subclass of: regulation of transmembrane receptor-mediated cAMP signaling in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
has_related_synonym: positive regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host
id: GO:0075212
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of transmembrane receptor-mediated cAMP signal transduction in response to host
type: Class
subclass of: negative regulation of transmembrane receptor-mediated signal transduction in response to host
subclass of: negative regulation of cAMP-mediated signaling in response to host
subclass of: regulation of transmembrane receptor-mediated cAMP signaling in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: negative regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host
has_obo_namespace: biological_process
id: GO:0075213
comment: Note that this term is used to annotate gene products of the symbiont.

spore encystment on host
type: Class
subclass of: development of symbiont on or near host
definition: The physiological, developmental and morphological changes that occur in a symbiont spore during the process of its encystment. Encystment means to enter a state of essentially suspended animation in which the spore is protected by an outer coating and remains immobile and inactive until favorable conditions for growth occur again. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075214

zoospore encystment on host
type: Class
subclass of: spore encystment on host
definition: The physiological, developmental and morphological changes that occur in a symbiont zoospore during the process of its encystment. Encystment means to enter a state of essentially suspended animation in which the spore is protected by an outer coating and remains immobile and inactive until favorable conditions for growth occur again. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075218

sporangium germination on or near host
type: Class
subclass of: development of symbiont on or near host
subclass of: multi-organism reproductive process
definition: The physiological, developmental and morphological changes that occur in a symbiont sporangium following release from dormancy up to the earliest signs of growth occurring on or near its host organism. A sporangium is a structure producing and containing spores. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: germination of symbiont sporangium on or near host
has_exact_synonym: symbiont sporangium germination on or near host
has_narrow_synonym: direct germination on or near host
has_obo_namespace: biological_process
id: GO:0075222
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

encysted zoospore germination on or near host
type: Class
subclass of: spore germination on or near host
definition: The physiological, developmental and morphological changes that occur in the symbiont encysted zoospore, which is on or near its host organism and germinates by developing a germ tube that may penetrate the host directly or indirectly through an appresorium. An encysted zoospore is a zoospore which has shed its flagellum and whose membrane has fused to form a walled cyst. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075226
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

spore movement on or near host
type: Class
subclass of: movement on or near host
definition: Any process involved in the directed movement of a motile spore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075230

zoospore movement on or near host
type: Class
subclass of: spore movement on or near host
definition: Any process involved in the directed movement of a zoospore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: zoospore motility on or near host
has_obo_namespace: biological_process
id: GO:0075234

maintenance of symbiont tolerance to host pH environment
type: Class
subclass of: maintenance of symbiont tolerance to host environment
subclass of: response to host pH environment
definition: Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against pH environment of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075238
comment: Note that this term is used to annotate gene products of the symbiont.

response to host pH environment
type: Class
subclass of: response to host
definition: Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: response of symbiont to host pH environment
has_obo_namespace: biological_process
id: GO:0075293

spore dispersal on or near host
type: Class
subclass of: interaction with host
definition: Any process in which a symbiont disseminates its spores, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: spore dispersal on or near host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075325
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

active spore dispersal on or near host
type: Class
subclass of: spore dispersal on or near host
definition: Any active process in which a symbiont disseminates its spores, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: active spore dispersal on or near host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075326
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

passive spore dispersal on or near host
type: Class
subclass of: spore dispersal on or near host
definition: Any passive process in which a symbiont disseminates its spores, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: passive spore dispersal on or near host during symbiotic interaction
has_obo_namespace: biological_process
id: GO:0075327
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

formation by symbiont of arbuscule for nutrient acquisition from host
type: Class
subclass of: formation of specialized structure for nutrient acquisition from host
definition: The assembly by an organism of an arbuscule, a fine, tree-like hyphal structure projected into the host cell for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075328
comment: Note that this term should not be used to annotate gene products of the host. It should only be used to annotate those gene products from the symbiont involved in this process.

modulation by host of symbiont adenylate cyclase-mediated signal transduction
type: Class
subclass of: modulation by host of symbiont signal transduction pathway
definition: Any process in which the host organism modulates the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075332
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "modulation by symbiont of host adenylate cyclase-mediated signal transduction; GO:0075335".

positive regulation by host of symbiont adenylate cyclase-mediated signal transduction
type: Class
subclass of: positive regulation by host of symbiont signal transduction pathway
subclass of: modulation by host of symbiont adenylate cyclase-mediated signal transduction
definition: Any process in which the host organism activates, maintains or increases the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075333
comment: Note that this term is used to annotate gene products of the host. To annotate symbiont gene products, consider the biological process term "positive regulation by symbiont of host adenylate cyclase-mediated signal transduction; GO:0075336".

modulation of symbiont adenylate cyclase-mediated signal transduction in response to host
type: Class
subclass of: regulation of signal transduction in response to host
definition: Any process in which the symbiont organism modulates the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075334
comment: Note that this term is used to annotate gene products of the symbiont.

positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host
type: Class
subclass of: positive regulation of signal transduction in response to host
subclass of: modulation of symbiont adenylate cyclase-mediated signal transduction in response to host
definition: Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075335
comment: Note that this term is used to annotate gene products of the symbiont.

negative regulation of symbiont adenylate cyclase-mediated signal transduction in response to host
type: Class
subclass of: negative regulation of signal transduction in response to host
subclass of: modulation of symbiont adenylate cyclase-mediated signal transduction in response to host
definition: Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075336
comment: Note that this term is used to annotate gene products of the symbiont.

disruption by symbiont of host cell PML body
type: Class
subclass of: disruption by symbiont of host cellular component
definition: The breakdown, by the symbiont, of a PML body within a host cell. A PML body is a nuclear body that reacts against SP100 auto-antibodies (PML = promyelocytic leukemia). The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: catabolism by symbiont of host cell PML body
has_exact_synonym: degradation by symbiont of host cell PML body
has_exact_synonym: disassembly by symbiont of host cell PML NB
has_exact_synonym: disassembly by symbiont of host cell PML body
has_exact_synonym: disassembly by symbiont of host cell PML body during symbiotic interaction
has_exact_synonym: disassembly by symbiont of host cell PML nuclear body
has_obo_namespace: biological_process
id: GO:0075342

modulation by symbiont of abscisic acid levels in host
type: Class
subclass of: modulation by symbiont of host hormone or growth regulator levels
definition: The alteration by an organism of the levels of abscisic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075343
comment: Note that this term is intended for use in annotation of symbiont gene products. For host gene products that regulate abscisic acid levels in the host, consider annotating to 'regulation of abscisic acid mediated signaling ; GO:0009787' or 'regulation of abscisic acid biosynthetic process ; GO:0010115'.

modulation by symbiont of host protein levels
type: Class
subclass of: modification of morphology or physiology of other organism involved in symbiotic interaction
definition: The alteration by an organism of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075344
comment: Note that this term is intended for use in annotation of symbiont gene products.

modification by symbiont of host protein
type: Class
subclass of: metabolism by symbiont of host protein
definition: The covalent alteration by an organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0075345
in_subset: gosubset prok
comment: Note that this term is intended for use in annotation of symbiont gene products. For host gene products that modify host proteins, consider annotation to 'protein modification process' GO:0006464.

modification by symbiont of host protein by ubiquitination
type: Class
subclass of: modification by symbiont of host protein
definition: The process in which an organism adds one or more ubiquitin groups to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_exact_synonym: modification by symbiont of host protein by ubiquitinylation
has_exact_synonym: modification by symbiont of host protein by ubiquitylation
has_obo_namespace: biological_process
id: GO:0075346
comment: Note that this term is intended for use in annotation of symbiont gene products. For host gene products that ubiquitinate host proteins, consider annotation to 'protein ubiquitination ; GO:0016567'.

endosome membrane permeabilization involved in viral entry into host cell
type: Class
subclass of: permeabilization of host organelle membrane involved in viral entry into host cell
definition: Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm.
imported from: go.owl
created by: jane
creation date: 2010-06-02T02:40:25Z
has_alternative_id: GO:0075518
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via caveolae-mediated endocytosis followed by endosome membrane
has_related_synonym: viral entry into host cell via clathrin-mediated endocytosis followed by endosome membrane permeabilization
id: GO:0075502
in_subset: virus checked

fusion of virus membrane with host macropinosome membrane
type: Class
subclass of: fusion of virus membrane with host endosome membrane
definition: Fusion of a viral membrane with a host macropinosome membrane, that occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents into the host cell cytoplasm.
imported from: go.owl
created by: jane
creation date: 2010-06-02T02:45:47Z
has_exact_synonym: viral entry into host cell via macropinocytosis followed by membrane fusion with the endosome membrane
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via macropinocytosis followed by membrane fusion with the host macropinosome membrane
id: GO:0075503
in_subset: virus checked

macropinosomal membrane permeabilization involved in viral entry into host cell
type: Class
subclass of: permeabilization of host organelle membrane involved in viral entry into host cell
definition: Induction of macropinosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus in a macropinosome, and results in release of the viral contents from the macropinosome into the host cell cytoplasm.
imported from: go.owl
created by: jane
creation date: 2010-06-02T02:48:36Z
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via macropinocytosis followed by macropinosomal membrane permeabilization
id: GO:0075504
in_subset: virus checked

entry of intact viral capsid into host nucleus through nuclear pore complex
type: Class
subclass of: viral penetration into host nucleus
definition: Viral penetration into the host nucleus where a viral capsid passes intact through the host nuclear pore complex (NPC).
imported from: go.owl
created by: janelomax
creation date: 2011-07-26T04:35:03Z
has_obo_namespace: biological_process
id: GO:0075505
in_subset: virus checked
comment: This mechanism is used by viruses with capsids small enough to cross the nuclear pore complex, such as the single-stranded (ss) DNA viruses Parvoviridae, Circoviridae and Geminiviridae.

entry of viral genome into host nucleus through nuclear pore complex via importin
type: Class
subclass of: viral penetration into host nucleus
definition: Viral penetration into the host nucleus where the viral genome passes through the nuclear pore complex (NPC) using the cellular importin transport machinery.
imported from: go.owl
created by: janelomax
creation date: 2011-07-26T04:36:46Z
has_exact_synonym: entry of viral genome into host nucleus via cellular importin transport through the nuclear pore complex
has_obo_namespace: biological_process
id: GO:0075506
in_subset: virus checked
comment: This mechanism is used by some RNA viruses (e.g. Orthomyxoviridae), some dsDNA viruses (e.g. Polyomaviridae) and some ssRNA viruses (e.g. Lentivirus).

entry of viral genome into host nucleus via docking of viral capsid to the nuclear pore complex and injection of viral genome
type: Class
subclass of: viral penetration into host nucleus
definition: Viral penetration into the host nucleus where the where a viral capsid docks on the cytoplasmic side of the nuclear pore complex (NPC) and ejects the viral genome through the pore into the nucleoplasm.
imported from: go.owl
created by: janelomax
creation date: 2011-07-26T04:52:51Z
has_obo_namespace: biological_process
id: GO:0075507
in_subset: virus checked
comment: This mechanism is used by viruses such as Herpesvirales whose capsid is too large to enter the nuclear pore complex (NPC) pore.

entry of viral genome into host nucleus via retainment of capsid in nuclear pore complex and release of genome into nucleoplasm
type: Class
subclass of: viral penetration into host nucleus
definition: Viral penetration into the host nucleus where a viral capsid enters the host nuclear pore complex (NPC) but remains attached to the pore on the nuclear side. The capsid then disassembles, releasing the viral genome into the nucleoplasm.
imported from: go.owl
created by: janelomax
creation date: 2011-07-26T04:56:10Z
has_exact_synonym: entry of viral genome into host nucleus via attachment of capsid to nuclear pore complex and release of genome into nucleoplasm
has_obo_namespace: biological_process
id: GO:0075508
in_subset: virus checked
comment: This mechanism is used by viruses such as Hepadnaviridae whose capsids enter the NPC but are too big to pass intact into the nucleus.

endocytosis involved in viral entry into host cell
type: Class
subclass of: transport of virus
definition: Any endocytosis that is involved in the uptake of a virus into a host cell.
imported from: go.owl
created by: janelomax
creation date: 2011-07-27T11:06:34Z
database_cross_reference: VZ:977
has_exact_synonym: viral penetration via endocytosis followed by endosome disruption
has_exact_synonym: virus endocytosis by host
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via endocytosis
id: GO:0075509
in_subset: goslim virus
in_subset: virus checked

macropinocytosis involved in viral entry into host cell
type: Class
subclass of: endocytosis involved in viral entry into host cell
subclass of: multi-organism macropinocytosis
definition: Any macropinocytosis that is involved in the uptake of a virus into a host cell.
imported from: go.owl
created by: janelomax
creation date: 2011-07-27T11:24:59Z
database_cross_reference: VZ:800
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via macropinocytosis
id: GO:0075510
in_subset: virus checked

macropinosome lysis involved in viral entry into host cell
type: Class
subclass of: lysis of host organelle involved in viral entry into host cell
definition: Viral-induced lysis of the macropinosome involved in the uptake of a virus into a host cell. Occurs after internalization of the virus in a macropinosome, and results in the release of viral contents from the macropinosome into the host cell cytoplasm.
imported from: go.owl
created by: janelomax
creation date: 2011-07-27T11:38:07Z
has_obo_namespace: biological_process
id: GO:0075511
in_subset: virus checked

clathrin-mediated endocytosis of virus by host cell
type: Class
subclass of: receptor-mediated endocytosis of virus by host cell
definition: Any clathrin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicle containing the virus.
imported from: go.owl
created by: janelomax
creation date: 2011-07-27T02:08:54Z
has_alternative_id: GO:0075516
database_cross_reference: VZ:957
has_exact_synonym: viral penetration via clathrin-mediated endocytosis
has_narrow_synonym: viral entry into host cell via clathrin-mediated endocytosis followed by endosome lysis
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via clathrin-mediated endocytosis
id: GO:0075512
in_subset: virus checked

caveolin-mediated endocytosis of virus by host cell
type: Class
subclass of: receptor-mediated endocytosis of virus by host cell
definition: Any caveolin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins when material is taken up into plasma membrane caveolae - specialized lipid rafts that form 50-70 nm flask-shaped invaginations of the plasma membrane - which then pinch off to form endocytic caveolar carriers containing the virus.
imported from: go.owl
created by: janelomax
creation date: 2011-07-27T02:40:04Z
database_cross_reference: VZ:976
has_exact_synonym: viral entry into host cell via caveolae-mediated endocytosis
has_exact_synonym: viral penetration via caveolae-mediated endocytosis followed by endosome disruption
has_obo_namespace: biological_process
has_related_synonym: viral entry into host cell via caveolin-mediated endocytosis
id: GO:0075513
in_subset: virus checked

endosome lysis involved in viral entry into host cell
type: Class
subclass of: lysis of host organelle involved in viral entry into host cell
definition: Viral-induced lysis of the endosome involved in uptake of a virus into a host cell. Occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents from the endosome into the host cell cytoplasm.
imported from: go.owl
created by: janelomax
creation date: 2011-07-27T02:56:15Z
has_exact_synonym: viral entry into host cell via caveolae-mediated endocytosis followed by endosome lysis
has_obo_namespace: biological_process
id: GO:0075514
in_subset: virus checked

microtubule-dependent intracellular transport of viral material
type: Class
subclass of: intracellular transport of virus
definition: The directed movement of the viral genome or viral particle within the host cell cytoplasm along host microtubules. Microtubule-dependent transport involves motor proteins like dynein and kinesin and is mostly used by viruses that target their genomes to the nucleus.
imported from: go.owl
created by: janelomax
creation date: 2011-08-03T01:45:25Z
has_obo_namespace: biological_process
id: GO:0075519
in_subset: virus checked

actin-dependent intracellular transport of virus
type: Class
subclass of: intracellular transport of virus
definition: The directed movement of a virus, or part of a virus, within the host cell cytoplasm via the host's actin filaments. Actin-dependent transport is induced by viral proteins that interact with actin and/or host cell motor proteins like myosins or that promotes actin polymerization/depolymerization reactions.
imported from: go.owl
created by: janelomax
creation date: 2011-08-03T01:45:55Z
database_cross_reference: VZ:991
has_exact_synonym: actin-dependent intracellular transport of viral material
has_obo_namespace: biological_process
id: GO:0075520
in_subset: virus checked

microtubule-dependent intracellular transport of viral material towards nucleus
type: Class
subclass of: microtubule-dependent intracellular transport of viral material
subclass of: transport of viral material towards nucleus
definition: The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.
imported from: go.owl
created by: janelomax
creation date: 2011-08-03T02:09:21Z
database_cross_reference: VZ:983
has_exact_synonym: microtubule-dependent intracellular transport of viral material to nucleus
has_obo_namespace: biological_process
id: GO:0075521
in_subset: virus checked

IRES-dependent viral translational initiation
type: Class
subclass of: viral process
subclass of: multi-organism metabolic process
definition: Process by which viral mRNA translation is initiated, where a domain in the 5' untranslated region (UTR) of the viral mRNA called an internal ribosome entry site (IRES) binds the host 43S preinitiation complex, circumventing regular cap-dependent translation initiation.
imported from: go.owl
created by: janelomax
creation date: 2011-08-03T02:25:03Z
database_cross_reference: VZ:867
has_obo_namespace: biological_process
id: GO:0075522
in_subset: virus checked

viral translational frameshifting
type: Class
subclass of: viral process
subclass of: multi-organism biosynthetic process
definition: A process which occurs during viral translation, which involves a translational recoding mechanism called programmed ribosomal frameshifting. This causes the ribosome to alter its reading of the mRNA to an a different open reading frame to produce alternate viral proteins.
imported from: go.owl
created by: janelomax
creation date: 2011-08-03T02:48:46Z
database_cross_reference: VZ:860
has_exact_synonym: ribosomal frameshifting involved in viral translation
has_obo_namespace: biological_process
id: GO:0075523
in_subset: virus checked

ribosomal skipping
type: Class
subclass of: viral process
definition: A translation process in which a specific viral peptide prevents the ribosome from covalently linking a new inserted amino acid, and lets it continue translation, thereby cleaving the nascent protein while allowing translation to continue.
imported from: go.owl
created by: janelomax
creation date: 2011-08-03T03:19:37Z
database_cross_reference: VZ:914
has_obo_namespace: biological_process
id: GO:0075524
in_subset: virus checked

viral translational termination-reinitiation
type: Class
subclass of: viral process
definition: A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF.
imported from: go.owl
created by: janelomax
creation date: 2011-08-04T12:01:22Z
database_cross_reference: VZ:858
has_exact_synonym: termination reinitiation involved in viral translation
has_exact_synonym: viral translation involving termination re-initiation
has_exact_synonym: viral translation involving termination-reinitiation
has_exact_synonym: viral translation involving translational stop-start
has_obo_namespace: biological_process
id: GO:0075525
in_subset: virus checked

cap snatching
type: Class
subclass of: viral process
definition: A transcription initiation process during which a nucleotide sequence between 10 and 20 nucleotides in size is cleaved from the 5' end of host mRNAs by a viral RNA-dependent polymerase. The capped leader sequence obtained is subsequently used to prime transcription on the viral genome, which ultimately leads to the synthesis of capped, translatable viral mRNAs.
imported from: go.owl
created by: janelomax
creation date: 2011-08-04T01:19:00Z
database_cross_reference: VZ:839
has_exact_synonym: cap snatching involved in viral mRNA transcription
has_obo_namespace: biological_process
id: GO:0075526
in_subset: virus checked

viral RNA editing
type: Class
subclass of: viral process
subclass of: multi-organism metabolic process
definition: The process by which bases in viral mRNA are chemically altered during viral transcription. This is usually the incorporation of 1 - 6 additional nucleotides, which shifts the reading frame, allowing the generation of different protein products or through a specific nucleotide change that eliminates the termination codon.
imported from: go.owl
created by: janelomax
creation date: 2011-08-04T02:07:03Z
database_cross_reference: VZ:857
has_exact_synonym: RNA editing involved in viral mRNA transcription
has_obo_namespace: biological_process
id: GO:0075527
in_subset: virus checked

modulation by virus of host immune response
type: Class
subclass of: modulation by virus of host process
subclass of: modulation by symbiont of host immune response
definition: The process in which a virus effects a change in the host immune response.
imported from: go.owl
created by: janelomax
creation date: 2011-08-04T02:47:57Z
has_exact_synonym: regulation by virus of host immune system process
has_obo_namespace: biological_process
id: GO:0075528
in_subset: goslim virus
in_subset: virus checked

establishment of latency as a circular episome
type: Class
subclass of: establishment of episomal latency
definition: A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a circular structure.
imported from: go.owl
created by: janelomax
creation date: 2011-08-04T03:08:17Z
database_cross_reference: PHI:0000054
has_exact_synonym: establishment of circular plasmid latency
has_exact_synonym: establishment of latency as a circular plasmid
has_obo_namespace: biological_process
id: GO:0075529

establishment of latency as a linear episome
type: Class
subclass of: establishment of episomal latency
definition: A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.
imported from: go.owl
created by: janelomax
creation date: 2011-08-04T03:14:23Z
database_cross_reference: PHI:0000053
has_exact_synonym: establishment of latency as a linear plasmid
has_exact_synonym: establishment of linear plasmid latency
has_obo_namespace: biological_process
id: GO:0075530

transport of viral material towards nucleus
type: Class
subclass of: intracellular transport of virus
definition: The directed movement of a virus, or part of a virus, towards the host cell nucleus. The process begins after viral entry, and ends when the viral material is at the nuclear membrane.
imported from: go.owl
created by: jane
creation date: 2009-11-05T03:33:36Z
database_cross_reference: VZ:990
has_exact_synonym: cytoplasmic inwards viral transport
has_exact_synonym: transport of viral material to nucleus
has_exact_synonym: viral genome transport to host cell nucleus
has_obo_namespace: biological_process
id: GO:0075606
in_subset: goslim virus
in_subset: virus checked
comment: This process does not include the viral material crossing the nuclear membrane. For transport of viral material into the nucleus, consider instead: 'viral penetration into host nucleus ; GO:0075732'.

establishment of integrated proviral latency
type: Class
subclass of: establishment of viral latency
definition: A process by which the virus integrates into the host genome and establishes as a stable provirus or prophage.
imported from: go.owl
created by: jane
creation date: 2009-05-07T02:28:41Z
has_alternative_id: GO:0019047
database_cross_reference: PHI:0000055
database_cross_reference: Reactome:REACT_6918
database_cross_reference: Reactome:REACT_8990
database_cross_reference: VZ:980
has_exact_synonym: prophage integration
has_exact_synonym: provirus integration
has_obo_namespace: biological_process
id: GO:0075713
in_subset: goslim virus

establishment of episomal latency
type: Class
subclass of: establishment of viral latency
definition: A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a distinct genetic entity.
imported from: go.owl
created by: jane
creation date: 2009-11-26T03:57:44Z
database_cross_reference: PHI:0000051
has_exact_synonym: establishment of plasmid latency
has_narrow_synonym: establishment as a plasmid prophage
has_obo_namespace: biological_process
id: GO:0075720

viral penetration into host nucleus
type: Class
subclass of: intracellular transport of virus
subclass of: multi-organism nuclear import
definition: The crossing by the virus of the host nuclear membrane, either as naked viral genome or for small viruses as an intact capsid.
imported from: go.owl
created by: jane
creation date: 2009-05-01T02:43:16Z
database_cross_reference: VZ:989
has_exact_synonym: viral entry into host nucleus
has_exact_synonym: viral import into host nucleus
has_obo_namespace: biological_process
id: GO:0075732
in_subset: goslim virus
in_subset: virus checked

intracellular transport of virus
type: Class
subclass of: transport of virus
subclass of: multi-organism intracellular transport
definition: The directed movement of a virus, or part of a virus, within the host cell.
imported from: go.owl
created by: jane
creation date: 2009-05-01T04:01:33Z
has_alternative_id: GO:0046788
has_alternative_id: GO:0046795
has_alternative_id: GO:0046796
database_cross_reference: Reactome:REACT_115827
database_cross_reference: Reactome:REACT_115893
database_cross_reference: Reactome:REACT_6136
database_cross_reference: Reactome:REACT_6138
database_cross_reference: Reactome:REACT_6164
database_cross_reference: Reactome:REACT_6179
database_cross_reference: Reactome:REACT_6194
database_cross_reference: Reactome:REACT_6248
database_cross_reference: Reactome:REACT_6289
database_cross_reference: Reactome:REACT_6296
database_cross_reference: Reactome:REACT_6303
database_cross_reference: Reactome:REACT_6322
has_exact_synonym: egress of virus within host cell
has_exact_synonym: intracellular transport of viral material
has_exact_synonym: movement of virus within host cell
has_exact_synonym: viral genome transport in host cell
has_obo_namespace: biological_process
has_related_synonym: intracellular virion transport
has_related_synonym: viral egress
id: GO:0075733
in_subset: virus checked

response to herbivore
type: Class
subclass of: response to other organism
definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0080027

host response to induction by symbiont of tumor, nodule or growth in host
type: Class
subclass of: response to symbiont
definition: Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0080034

effector dependent induction by symbiont of host immune response
type: Class
subclass of: induction by symbiont of host immune response
definition: Any process that involves recognition of an effector, and by which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction. Effectors are proteins secreted into the host cell by pathogenic microbes, presumably to alter host immune response signaling. The best characterized effectors are bacterial effectors delivered into the host cell by type III secretion system (TTSS). Effector-triggered immunity (ETI) involves the direct or indirect recognition of an effector protein by the host (for example through plant resistance or R proteins) and subsequent activation of host immune response.
imported from: go.owl
created by: donghui
creation date: 2011-08-10T04:33:53Z
has_exact_synonym: effector dependent induction by symbiont of host immunity
has_obo_namespace: biological_process
id: GO:0080185

modification by symbiont of host morphology or physiology via protein secreted by type V secretion system
type: Class
subclass of: interaction with host via protein secreted by type V secretion system
subclass of: modification by symbiont of host morphology or physiology via secreted substance
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type V secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-07-09T03:08:54Z
has_obo_namespace: biological_process
id: GO:0085000
in_subset: gosubset prok

formation by symbiont of stylet for nutrient acquisition from host
type: Class
subclass of: formation of specialized structure for nutrient acquisition from host
definition: The assembly by a symbiont of a stylet, a hollow protrusible spear-like structure projected into the host cell for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-24T01:49:06Z
has_obo_namespace: biological_process
id: GO:0085001

interaction with host mediated by secreted substance released by symbiont from symbiotic structure
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis.
imported from: go.owl
created by: jane
creation date: 2010-02-10T02:38:10Z
has_obo_namespace: biological_process
id: GO:0085002
comment: This term can be used for annotation of structures like the parasitophorous vacuole which are symbiont induced but entirely host-derived, as well as structures like the stylet which are entirely symbiont-derived.

interaction with host via secreted substance released from stylet
type: Class
subclass of: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
definition: An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the stylet, a hollow protrusible spear-like structure in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T02:53:56Z
has_obo_namespace: biological_process
id: GO:0085003

interaction with host via secreted substance released from haustorium
type: Class
subclass of: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
definition: An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T02:58:39Z
has_obo_namespace: biological_process
id: GO:0085004

interaction with host via secreted substance released from invasive hyphae
type: Class
subclass of: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
definition: An interaction with the host organism mediated by a substance released by the other (symbiont) organism via invasive hyphae. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T02:59:51Z
has_obo_namespace: biological_process
id: GO:0085005

interaction with host mediated by symbiont secreted substance released from symbiont-containing vacuole
type: Class
subclass of: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
definition: An interaction with the host organism mediated by a substance released by the other (symbiont) organism via a symbiont-containing vacuole, a specialized sac within the host in which the symbiont resides. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:00:56Z
has_exact_synonym: interaction with host mediated by symbiont secreted substance released from parasitophorous vacuole
has_obo_namespace: biological_process
id: GO:0085006

interaction with host via secreted substance released from rhoptry
type: Class
subclass of: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
definition: An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:02:08Z
has_obo_namespace: biological_process
id: GO:0085007

interaction with host via secreted substance released from microneme
type: Class
subclass of: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
definition: An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the microneme, a small, elongated secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:03:16Z
has_obo_namespace: biological_process
id: GO:0085008

interaction with host mediated by symbiont secreted substance released from Maurer's cleft
type: Class
subclass of: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
definition: An interaction with the host organism mediated by a substance released by the other (symbiont) organism via Maurer's cleft. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:08:39Z
has_exact_synonym: interaction with host mediated by symbiont secreted substance released from Maurers cleft
has_obo_namespace: biological_process
id: GO:0085009

interaction with host mediated by secreted substance entering host via endocytosis
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a secreted substance from the symbiont entering host cells via endocytosis of the substance. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:12:31Z
has_obo_namespace: biological_process
id: GO:0085010

interaction with host via protein secreted by Sec complex
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:18:36Z
has_exact_synonym: interaction with host via protein secreted by Sec secretion system
has_obo_namespace: biological_process
id: GO:0085011

interaction with host via protein secreted by Tat complex
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Tat complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:29:37Z
has_exact_synonym: interaction with host via protein secreted by Tat secretion system
has_obo_namespace: biological_process
id: GO:0085012

interaction with host via protein secreted by type VII secretion system
type: Class
subclass of: interaction with host via secreted substance involved in symbiotic interaction
definition: An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-02-10T03:31:07Z
has_obo_namespace: biological_process
id: GO:0085013

dormancy entry of symbiont in host
type: Class
subclass of: development of symbiont in host
definition: Entry into a dormant state of the symbiont within the host organism.
imported from: go.owl
created by: jane
creation date: 2010-05-19T02:33:26Z
has_obo_namespace: biological_process
id: GO:0085014

dormancy maintenance of symbiont in host
type: Class
subclass of: development of symbiont in host
definition: Any process in which a dormant state is maintained by the symbiont within the host organism.
imported from: go.owl
created by: jane
creation date: 2010-05-19T03:17:32Z
has_exact_synonym: NRP
has_exact_synonym: non-replicating persistence
has_obo_namespace: biological_process
id: GO:0085015

dormancy exit of symbiont in host
type: Class
subclass of: development of symbiont in host
definition: Exit from dormant state, also known as resuscitation, of the symbiont within the host organism.
imported from: go.owl
created by: jane
creation date: 2010-05-19T03:23:07Z
has_exact_synonym: resuscitation of symbiont
has_obo_namespace: biological_process
id: GO:0085016

symbiont entry into host cell forming a symbiont-containing vacuole
type: Class
subclass of: entry into host cell
definition: The invasion by a symbiont of a cell of its host organism, forming a vacuole in which the parasite resides. The vacuole membrane is formed from lipids and proteins derived from both host and symbiont. Begins when the symbiont attaches on to the host cell membrane which invaginates and deepens as the symbiont enters, and ends when the host cell membrane closes behind the newly-formed vacuole.
imported from: go.owl
created by: jane
creation date: 2010-05-20T02:55:34Z
has_exact_synonym: symbiont entry into host cell forming a parasitophorous vacuole
has_exact_synonym: symbiont entry into host cell forming a pathogen-containing vacuole
has_obo_namespace: biological_process
id: GO:0085017

maintenance of symbiont-containing vacuole by host
type: Class
subclass of: modification by host of symbiont morphology or physiology
definition: The process in which a host organism maintains the structure and function of a symbiont-containing vacuole. The symbiont-containing vacuole is a membrane-bounded vacuole within a host cell in which a symbiont organism resides, and can serve to reduce pathogenicity of invading symbionts by restricting them to the vacuolar compartment.
imported from: go.owl
created by: jane
creation date: 2010-05-20T03:58:51Z
has_exact_synonym: maintenance of parasitophorous vacuole
has_exact_synonym: maintenance of pathogen-containing vacuole
has_narrow_synonym: maintenance of vacuolar integrity during bacterial infection
has_obo_namespace: biological_process
id: GO:0085018

formation by symbiont of a tubovesicular network for nutrient acquisition from host
type: Class
subclass of: formation of specialized structure for nutrient acquisition from host
definition: The assembly of a symbiont-induced complex organelle that comprises of multiple protein and lipid domains for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-05-20T04:29:24Z
has_exact_synonym: formation of a symbiont- induced tubovesicular network for nutrient acquisition from host
has_obo_namespace: biological_process
id: GO:0085019

modification by symbiont of host morphology or physiology via protein secreted by type I secretion system
type: Class
subclass of: interaction with host via protein secreted by type I secretion system
subclass of: modification by symbiont of host morphology or physiology via secreted substance
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type I secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-07-09T03:20:44Z
has_obo_namespace: biological_process
id: GO:0085021
in_subset: gosubset prok

modification by symbiont of host morphology or physiology via protein secreted by type VI secretion system
type: Class
subclass of: interaction with host via protein secreted by type VI secretion system
subclass of: modification by symbiont of host morphology or physiology via secreted substance
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VI secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-07-09T03:32:02Z
has_obo_namespace: biological_process
id: GO:0085022
in_subset: gosubset prok

modification by symbiont of host morphology or physiology via protein secreted by type VII secretion system
type: Class
subclass of: modification by symbiont of host morphology or physiology via secreted substance
subclass of: interaction with host via protein secreted by type VII secretion system
definition: The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VII secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-07-09T03:35:02Z
has_obo_namespace: biological_process
id: GO:0085023
in_subset: gosubset prok

modification by symbiont of host morphology or physiology via protein secreted by Sec complex
type: Class
subclass of: modification by symbiont of host morphology or physiology via secreted substance
subclass of: interaction with host via protein secreted by Sec complex
definition: The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Sec complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-07-09T03:44:31Z
has_exact_synonym: modification by symbiont of host morphology or physiology via protein secreted by the Sec secretion system
has_obo_namespace: biological_process
id: GO:0085024

modification by symbiont of host morphology or physiology via protein secreted by Tat complex
type: Class
subclass of: modification by symbiont of host morphology or physiology via secreted substance
subclass of: interaction with host via protein secreted by Tat complex
definition: The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Tat complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: jane
creation date: 2010-07-09T03:47:01Z
has_exact_synonym: modification by symbiont of host morphology or physiology via protein secreted by the Tat secretion system
has_obo_namespace: biological_process
id: GO:0085025

entry into host via enzymatic degradation of host anatomical structure
type: Class
subclass of: entry into host through host barriers
definition: Penetration by symbiont of a host anatomical structure which provides a barrier to symbiont entry, mediated by symbiont degradative enzymes.
imported from: go.owl
created by: jane
creation date: 2010-07-09T04:00:22Z
has_obo_namespace: biological_process
id: GO:0085027

entry into host via enzymatic degradation of host cuticle
type: Class
subclass of: entry into host via enzymatic degradation of host anatomical structure
definition: Penetration by symbiont of host physical barriers, mediated by symbiont degradative enzymes.
imported from: go.owl
created by: jane
creation date: 2010-07-09T04:02:41Z
has_obo_namespace: biological_process
id: GO:0085028

mutualism
type: Class
subclass of: symbiosis, encompassing mutualism through parasitism
definition: An interaction between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other.
imported from: go.owl
created by: janelomax
creation date: 2010-07-27T01:25:21Z
has_obo_namespace: biological_process
id: GO:0085030

commensalism
type: Class
subclass of: symbiosis, encompassing mutualism through parasitism
definition: An interaction between two organisms living together in more or less intimate association in a relationship in which one benefits and the other is unaffected.
imported from: go.owl
created by: janelomax
creation date: 2010-07-27T01:27:55Z
has_obo_namespace: biological_process
id: GO:0085031

modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
type: Class
subclass of: modulation by symbiont of host signal transduction pathway
definition: Any process in which an organism modulates the frequency, rate or extent of host NF-kappaB-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: janelomax
creation date: 2010-07-27T02:13:37Z
has_exact_synonym: modulation by symbiont of host NF-kappaB-mediated signal transduction pathway
has_obo_namespace: biological_process
id: GO:0085032

positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
type: Class
subclass of: modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
definition: Any process that activates or increases the frequency, rate or extent of host NF-kappaB-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: janelomax
creation date: 2010-07-27T02:47:01Z
has_exact_synonym: activation by symbiont of host I-kappaB kinase/NF-kappaB cascade
has_exact_synonym: induction by symbiont of host I-kappaB kinase/NF-kappaB cascade
has_exact_synonym: positive regulation by symbiont of host NF-kappaB-mediated signal transduction pathway
has_exact_synonym: positive regulation by symbiont of nuclear factor kappa-light-chain-enhancer of activated B cells mediated signal transduction pathway
has_exact_synonym: stimulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
has_exact_synonym: up regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
has_exact_synonym: up-regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
has_exact_synonym: upregulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
has_obo_namespace: biological_process
id: GO:0085033

disassembly by symbiont of host cuticle
type: Class
subclass of: modification by symbiont of host structure
definition: The process in which a symbiont organism effects a breakdown of the host organism cuticle. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: janelomax
creation date: 2010-07-27T01:08:15Z
has_exact_synonym: catabolism of host cuticle
has_obo_namespace: biological_process
has_related_synonym: degradation of host cuticle
id: GO:0085044

receptor-mediated bacteriophage reversible attachment to host cell
type: Class
subclass of: receptor-mediated virion attachment to host cell
definition: Process by which a bacteriophage, using its tail fibers, spikes or a baseplate component, initially recognizes and binds to its specific receptor on the host cell surface. This process is reversible and allows the release of a bacteriophage without affecting infection.
imported from: go.owl
created by: brenley
has_exact_synonym: reversible bacteriophage attachment, binding of host cell surface receptor
has_obo_namespace: biological_process
has_related_synonym: phage reversible adsorption
id: GO:0098001
comment: This process was historically defined by the release, by Waring blending or sonication, by dilution and centrifugation, or by filtration and washing, of infective virions from their complexes with cells, thus contrary to what is observed after irreversible adsorption.

receptor-mediated bacteriophage irreversible attachment to host cell
type: Class
subclass of: receptor-mediated virion attachment to host cell
definition: The processes by which a bacteriophage initially commits to infection by binding the host receptor irreversibly. Disruption of the phage:cell complex at this step results in the loss of infective phage virions since the process is characterized by conformational changes of bacteriophage head and tail proteins and injection of bacteriophage proteins into the infected cell.
imported from: go.owl
created by: brenley
has_exact_synonym: irreversible bacteriophage attachment, binding of host cell surface receptor
has_obo_namespace: biological_process
has_related_synonym: phage irreversible adsorption
id: GO:0098002

viral tail assembly
type: Class
subclass of: viral process
definition: The aggregation, arrangement and bonding together of a set of components to form a virus tail.
imported from: go.owl
created by: brenley
creation date: 2012-07-18T16:01:59Z
has_exact_synonym: virus tail assembly
has_narrow_synonym: bacteriophage tail assembly
has_obo_namespace: biological_process
id: GO:0098003
in_subset: virus checked

virus tail fiber assembly
type: Class
subclass of: viral process
definition: The aggregation, arrangement and bonding together of a set of components to form a virus tail fiber.
imported from: go.owl
created by: brenley
creation date: 2012-07-18T16:08:15Z
has_obo_namespace: biological_process
id: GO:0098004
in_subset: virus checked

viral head-tail joining
type: Class
subclass of: viral process
definition: Process by which virus heads and tails are attached to each other.
imported from: go.owl
created by: brenley
creation date: 2012-07-18T16:11:59Z
has_exact_synonym: virus head-tail joining
has_narrow_synonym: phage head tail joining
has_obo_namespace: biological_process
id: GO:0098005
in_subset: virus checked

viral DNA genome packaging, headful
type: Class
subclass of: viral DNA genome packaging
definition: The encapsulation of the viral genome within the capsid where DNA is packaged into the capsid until the capsid is full.
imported from: go.owl
created by: brenley
creation date: 2012-07-18T16:15:09Z
has_narrow_synonym: phage headful packaging
has_obo_namespace: biological_process
id: GO:0098006
in_subset: virus checked
comment: Generalized transducing phages usually use this mode of DNA packaging.

viral DNA genome packaging via site-specific sequence recognition
type: Class
subclass of: viral DNA genome packaging
definition: The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites by a viral terminase.
imported from: go.owl
created by: brenley
creation date: 2012-07-20T11:36:49Z
has_obo_namespace: biological_process
id: GO:0098035
in_subset: virus checked

viral DNA genome packaging, 3' extended cos packaging
type: Class
subclass of: viral DNA genome packaging via site-specific sequence recognition
definition: The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 3' protruding ends.
imported from: go.owl
created by: brenley
creation date: 2012-07-20T11:38:40Z
has_obo_namespace: biological_process
id: GO:0098036
in_subset: virus checked

viral DNA genome packaging, 5' extended cos packaging
type: Class
subclass of: viral DNA genome packaging via site-specific sequence recognition
definition: The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 5' protruding ends.
imported from: go.owl
created by: brenley
creation date: 2012-07-20T11:40:47Z
has_obo_namespace: biological_process
id: GO:0098037
in_subset: virus checked

virus baseplate assembly
type: Class
subclass of: viral process
definition: The aggregation, arrangement and bonding together of a set of components to form a virus baseplate.
imported from: go.owl
created by: brenley
creation date: 2012-07-25T14:50:32Z
has_obo_namespace: biological_process
id: GO:0098045
in_subset: virus checked

defense response to other organism
type: Class
subclass of: response to other organism
definition: Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.
imported from: go.owl
created by: davidos
creation date: 2013-11-11T12:59:11Z
has_obo_namespace: biological_process
id: GO:0098542

detection of other organism
type: Class
subclass of: response to other organism
definition: The series of events in which a stimulus from another organism is received and converted into a molecular signal.
imported from: go.owl
created by: davidos
creation date: 2013-11-11T14:28:54Z
has_obo_namespace: biological_process
id: GO:0098543

cellular response to virus
type: Class
subclass of: response to virus
definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
imported from: go.owl
created by: davidos
creation date: 2014-01-24T14:54:08Z
has_obo_namespace: biological_process
id: GO:0098586

multi-organismal cell-cell adhesion
type: Class
subclass of: multi-organism process
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0098610
comment: The attachment of one cell to another cell via adhesion molecules where the two interacting cells are from different organisms.

cell-cell adhesion involved in galactose-specific flocculation
type: Class
subclass of: cell-cell adhesion involved in flocculation via cell wall protein-carbohydrate interaction
definition: Cell-cell adhesion between two single-celled organisms, during flocculation, mediated via the binding of cell wall proteins on one cell to galactose residues on the other.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0098611

cell-cell adhesion involved in mannose-specific flocculation
type: Class
subclass of: cell-cell adhesion involved in flocculation via cell wall protein-carbohydrate interaction
definition: Cell-cell adhesion between two single-celled organisms, during flocculation, mediated via the binding of cell wall proteins on one cell to mannose residues on the other.
imported from: go.owl
has_obo_namespace: biological_process
id: GO:0098612

multi-organism membrane invagination
type: Class
subclass of: multi-organism membrane organization
definition: A membrane invagination which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-02T13:58:43Z
has_obo_namespace: biological_process
id: GO:1902535

multi-organism pinocytosis
type: Class
subclass of: multi-organism transport
definition: A pinocytosis which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-02T14:14:46Z
has_obo_namespace: biological_process
id: GO:1902537

multi-organism macropinocytosis
type: Class
subclass of: multi-organism pinocytosis
definition: A macropinocytosis which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-02T14:23:06Z
has_obo_namespace: biological_process
id: GO:1902539

multi-organism micropinocytosis
type: Class
subclass of: multi-organism pinocytosis
definition: A micropinocytosis which involves another organism.
imported from: go.owl
created by: bf
creation date: 2013-12-02T14:26:39Z
has_obo_namespace: biological_process
id: GO:1902541

multi-organism localization
type: Class
subclass of: multi-organism process
definition: A localization which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-18T13:51:13Z
has_exact_synonym: multi organism localization
has_obo_namespace: biological_process
id: GO:1902579

multi-organism cellular localization
type: Class
subclass of: multi-organism localization
definition: A cellular localization which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-18T14:04:41Z
has_exact_synonym: multi organism cellular localization
has_obo_namespace: biological_process
id: GO:1902581

multi-organism intracellular transport
type: Class
subclass of: multi-organism transport
definition: An intracellular transport which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-18T14:04:58Z
has_exact_synonym: multi organism intracellular transport
has_obo_namespace: biological_process
id: GO:1902583

multi-organism intercellular transport
type: Class
subclass of: multi-organism cellular process
subclass of: multi-organism transport
definition: An intercellular transport which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-19T13:25:05Z
has_exact_synonym: multi organism intercellular transport
has_obo_namespace: biological_process
id: GO:1902586

multi-organism plasmodesmata-mediated intercellular transport
type: Class
subclass of: multi-organism intercellular transport
definition: A plasmodesmata-mediated intercellular transport which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-19T13:37:53Z
has_exact_synonym: multi organism plasmodesmata-mediated intercellular transport
has_obo_namespace: biological_process
id: GO:1902588

multi-organism organelle organization
type: Class
subclass of: multi-organism cellular process
definition: An organelle organization which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-19T15:26:08Z
has_exact_synonym: multi organism organelle organization
has_obo_namespace: biological_process
id: GO:1902590

multi-organism membrane budding
type: Class
subclass of: multi-organism membrane organization
subclass of: multi-organism organelle organization
definition: A membrane budding which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-19T15:26:25Z
has_exact_synonym: multi organism membrane budding
has_obo_namespace: biological_process
id: GO:1902592

multi-organism nuclear import
type: Class
subclass of: multi-organism intracellular transport
definition: A nuclear import which involves another organism.
imported from: go.owl
created by: jl
creation date: 2013-12-19T15:26:43Z
has_exact_synonym: multi organism nuclear import
has_obo_namespace: biological_process
id: GO:1902594

rejection of pollen from other species
type: Class
subclass of: interspecies interaction between organisms
definition: The process involved in the rejection of pollen of one species by cells in the stigma of another species.
imported from: go.owl
created by: tb
creation date: 2013-05-29T21:12:09Z
has_exact_synonym: unilateral interspecific incompatibility
has_obo_namespace: biological_process
id: GO:1990109

envenomation resulting in hemolysis in other organism
type: Class
subclass of: envenomation resulting in cytolysis in other organism
definition: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with hemolysis in the bitten organism.
imported from: go.owl
created by: sp
creation date: 2013-07-18T10:46:03Z
has_obo_namespace: biological_process
id: GO:1990142

positive regulation by symbiont of RNA levels in host
type: Class
subclass of: modulation by symbiont of RNA levels in host
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the RNA levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-08T13:31:41Z
has_obo_namespace: biological_process
id: GO:1990208

negative regulation by symbiont of RNA levels in host
type: Class
subclass of: modulation by symbiont of RNA levels in host
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the RNA levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-09T18:09:33Z
has_obo_namespace: biological_process
id: GO:1990209

positive regulation by symbiont of indole acetic acid levels in host
type: Class
subclass of: modulation by symbiont of indole acetic acid levels in host
subclass of: positive regulation by symbiont of hormone or growth regulator levels in host
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the indole acetic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-09T18:54:11Z
has_obo_namespace: biological_process
id: GO:1990210

positive regulation by symbiont of jasmonic acid levels in host
type: Class
subclass of: modulation by symbiont of jasmonic acid levels in host
subclass of: positive regulation by symbiont of hormone or growth regulator levels in host
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-09T18:58:37Z
has_obo_namespace: biological_process
id: GO:1990211

positive regulation by symbiont of ethylene levels in host
type: Class
subclass of: modulation by symbiont of ethylene levels in host
subclass of: positive regulation by symbiont of hormone or growth regulator levels in host
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-09T19:03:10Z
has_obo_namespace: biological_process
id: GO:1990212

negative regulation by symbiont of salicylic acid levels in host
type: Class
subclass of: modulation by symbiont of salicylic acid levels in host
subclass of: positive regulation by symbiont of hormone or growth regulator levels in host
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of salicylic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-09T19:06:19Z
has_obo_namespace: biological_process
id: GO:1990213

negative regulation by symbiont of host protein levels
type: Class
subclass of: modulation by symbiont of host protein levels
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-10T15:39:45Z
has_obo_namespace: biological_process
id: GO:1990214

negative regulation by symbiont of host intracellular transport
type: Class
subclass of: modulation by symbiont of host intracellular transport
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of intracellular transport in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-10T15:42:22Z
has_obo_namespace: biological_process
id: GO:1990215

positive regulation by symbiont of host transcription
type: Class
subclass of: modulation by symbiont of host transcription
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of transcription in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-10T15:45:17Z
has_obo_namespace: biological_process
id: GO:1990216

negative regulation by symbiont of host phytoalexin production
type: Class
subclass of: modulation by symbiont of host phytoalexin production
definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of phytoalexin production in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-10T15:49:33Z
has_obo_namespace: biological_process
id: GO:1990217

positive regulation by symbiont of abscisic acid levels in host
type: Class
subclass of: modulation by symbiont of abscisic acid levels in host
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the abscisic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-10T15:54:10Z
has_obo_namespace: biological_process
id: GO:1990218

positive regulation by symbiont of host protein levels
type: Class
subclass of: modulation by symbiont of host protein levels
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-10T17:26:03Z
has_obo_namespace: biological_process
id: GO:1990219

positive regulation by symbiont of cytokinin levels in host
type: Class
subclass of: positive regulation by symbiont of hormone or growth regulator levels in host
definition: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the cytokinin levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
imported from: go.owl
created by: ml
creation date: 2013-10-16T15:27:27Z
has_obo_namespace: biological_process
id: GO:1990223

parasexual conjugation with cellular fusion
type: Class
subclass of: conjugation
definition: A conjugation process that results in the union of cellular and genetic information from compatible mating types, without the formation of zygotes. An example of this process is found in Candida albicans.
imported from: go.owl
created by: pr
creation date: 2014-01-28T10:30:20Z
has_broad_synonym: mating
has_obo_namespace: biological_process
id: GO:1990277

data item
type: Class
subclass of: information content entity

information content entity
type: Class
subclass of: generically dependent continuant

curation status specification
type: Class
equivalent class: Class
  one of: example to be eventually removed
  one of: metadata complete
  one of: organizational term
  one of: ready for release
  one of: metadata incomplete
  one of: uncurated
  one of: pending final vetting
  one of: to be replaced with external ontology term
  one of: requires discussion
subclass of: data about an ontology part
editor preferred term: curation status specification
has curation status: pending final vetting
definition: The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
editor note: Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)
term editor: PERSON:Bill Bug
definition source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>
definition source: OBI_0000266

data about an ontology part
type: Class
subclass of: data item
definition: data about an ontology part is a data item about a part of an ontology, for example a term
term editor: Person:Alan Ruttenberg

obsolescence reason specification
type: Class
equivalent class: Class
  one of: failed exploratory term
  one of: placeholder removed
  one of: terms merged
  one of: term imported
  one of: term split
subclass of: data about an ontology part
editor preferred term: obsolescence reason specification
has curation status: pending final vetting
definition: The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
editor note: The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology.
term editor: PERSON: Alan Ruttenberg
term editor: PERSON: Melanie Courtot

denotator type
type: Class
equivalent class: Class
  one of: universal
  one of: defined class
  one of: named class expression
subclass of: data about an ontology part
example of usage: The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are "natural kinds" and the latter arbitrary collections of entities.
definition: A denotator type indicates how a term should be interpreted from an ontological perspective.
term editor: Alan Ruttenberg
definition source: Barry Smith, Werner Ceusters

Viruses
type: Class
subclass of: organism or virus or viroid
imported from: ncbitaxon.owl
has_rank: superkingdom
database_cross_reference: GC_ID:1
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Vira
has_related_synonym: Viridae
has_related_synonym: viruses

Viroids
type: Class
subclass of: organism or virus or viroid
imported from: ncbitaxon.owl
has_rank: superkingdom
database_cross_reference: GC_ID:1
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Viroid
has_related_synonym: viroids

Acrogymnospermae
type: Class
subclass of: Spermatophyta
imported from: ncbitaxon.owl
database_cross_reference: GC_ID:1
has_obo_namespace: ncbi_taxonomy

Bacteria <prokaryote>
type: Class
subclass of: organism
imported from: ncbitaxon.owl
has_rank: superkingdom
database_cross_reference: GC_ID:11
database_cross_reference: PMID:10425795
database_cross_reference: PMID:10425796
database_cross_reference: PMID:10425797
database_cross_reference: PMID:10490293
database_cross_reference: PMID:10843050
database_cross_reference: PMID:10939651
database_cross_reference: PMID:10939673
database_cross_reference: PMID:10939677
database_cross_reference: PMID:11211268
database_cross_reference: PMID:11321083
database_cross_reference: PMID:11321113
database_cross_reference: PMID:11411719
database_cross_reference: PMID:11540071
database_cross_reference: PMID:11542017
database_cross_reference: PMID:11542087
database_cross_reference: PMID:11760965
database_cross_reference: PMID:12054223
database_cross_reference: PMID:2112744
database_cross_reference: PMID:270744
database_cross_reference: PMID:8123559
database_cross_reference: PMID:8590690
database_cross_reference: PMID:9103655
database_cross_reference: PMID:9336922
has_exact_synonym: Bacteria
has_exact_synonym: eubacteria
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Monera
has_related_synonym: Procaryotae
has_related_synonym: Prokaryota
has_related_synonym: Prokaryotae
has_related_synonym: bacteria
has_related_synonym: not Bacteria Haeckel 1894
has_related_synonym: prokaryote
has_related_synonym: prokaryotes

Archaea
type: Class
subclass of: organism
imported from: ncbitaxon.owl
has_rank: superkingdom
database_cross_reference: GC_ID:11
database_cross_reference: PMID:10425795
database_cross_reference: PMID:10425796
database_cross_reference: PMID:10425797
database_cross_reference: PMID:10490293
database_cross_reference: PMID:10843050
database_cross_reference: PMID:10939651
database_cross_reference: PMID:10939673
database_cross_reference: PMID:10939677
database_cross_reference: PMID:11211268
database_cross_reference: PMID:11321083
database_cross_reference: PMID:11321113
database_cross_reference: PMID:11411719
database_cross_reference: PMID:11540071
database_cross_reference: PMID:11541975
database_cross_reference: PMID:11542064
database_cross_reference: PMID:11542149
database_cross_reference: PMID:11760965
database_cross_reference: PMID:12054223
database_cross_reference: PMID:2112744
database_cross_reference: PMID:25527841
database_cross_reference: PMID:270744
database_cross_reference: PMID:8123559
database_cross_reference: PMID:8590690
database_cross_reference: PMID:9103655
database_cross_reference: PMID:9336922
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Archaebacteria
has_related_synonym: Mendosicutes
has_related_synonym: Metabacteria
has_related_synonym: Monera
has_related_synonym: Procaryotae
has_related_synonym: Prokaryota
has_related_synonym: Prokaryotae
has_related_synonym: archaea
has_related_synonym: prokaryote
has_related_synonym: prokaryotes

Eukaryota
type: Class
subclass of: organism
imported from: ncbitaxon.owl
has_rank: superkingdom
database_cross_reference: GC_ID:1
database_cross_reference: PMID:23020233
has_exact_synonym: eucaryotes
has_exact_synonym: eukaryotes
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Eucarya
has_related_synonym: Eucaryotae
has_related_synonym: Eukarya
has_related_synonym: Eukaryotae
has_related_synonym: eukaryotes

Chlorophyta
type: Class
subclass of: Viridiplantae
imported from: ncbitaxon.owl
has_rank: phylum
database_cross_reference: GC_ID:1
database_cross_reference: PMID:23020233
has_exact_synonym: green algae
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Chlorophycota
has_related_synonym: Chlorophyta sensu Bremer 1985
has_related_synonym: algae
has_related_synonym: green algae

Embryophyta
type: Class
subclass of: Streptophyta
imported from: ncbitaxon.owl
database_cross_reference: GC_ID:1
has_exact_synonym: higher plants
has_exact_synonym: land plants
has_exact_synonym: plants
has_obo_namespace: ncbi_taxonomy
has_related_synonym: land plants

Viridiplantae
type: Class
subclass of: Eukaryota
imported from: ncbitaxon.owl
has_rank: kingdom
database_cross_reference: GC_ID:1
has_exact_synonym: green plants
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Chlorobionta
has_related_synonym: Chlorophyta/Embryophyta group
has_related_synonym: chlorophyte/embryophyte group
has_related_synonym: green plants

Metazoa
type: Class
subclass of: Eukaryota
imported from: ncbitaxon.owl
has_rank: kingdom
database_cross_reference: GC_ID:1
has_exact_synonym: metazoans
has_exact_synonym: multicellular animals
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Animalia
has_related_synonym: animals

Magnoliophyta
type: Class
subclass of: Spermatophyta
imported from: ncbitaxon.owl
database_cross_reference: GC_ID:1
has_exact_synonym: angiosperms
has_exact_synonym: flowering plants
has_obo_namespace: ncbi_taxonomy
has_related_synonym: Angiospermae
has_related_synonym: flowering plants

Streptophyta
type: Class
subclass of: Viridiplantae
imported from: ncbitaxon.owl
has_rank: phylum
database_cross_reference: GC_ID:1
has_obo_namespace: ncbi_taxonomy

Tracheophyta
type: Class
subclass of: Embryophyta
imported from: ncbitaxon.owl
database_cross_reference: GC_ID:1
has_exact_synonym: vascular plants
has_obo_namespace: ncbi_taxonomy
has_related_synonym: vascular plants

Spermatophyta
type: Class
subclass of: Tracheophyta
imported from: ncbitaxon.owl
database_cross_reference: GC_ID:1
has_exact_synonym: seed plants
has_obo_namespace: ncbi_taxonomy
has_related_synonym: seed plants

Homo sapiens
type: Class
subclass of: Metazoa
imported from: ncbitaxon.owl
has_rank: species
database_cross_reference: GC_ID:1
has_exact_synonym: human
has_exact_synonym: man
has_obo_namespace: ncbi_taxonomy

kingdom
type: Class
subclass of: taxonomic rank
imported from: ncbitaxon.owl
has_obo_namespace: ncbi_taxonomy

phylum
type: Class
subclass of: taxonomic rank
imported from: ncbitaxon.owl
has_obo_namespace: ncbi_taxonomy

species
type: Class
subclass of: taxonomic rank
imported from: ncbitaxon.owl
has_obo_namespace: ncbi_taxonomy

superkingdom
type: Class
subclass of: taxonomic rank
imported from: ncbitaxon.owl
has_obo_namespace: ncbi_taxonomy

quality
type: Class
subclass of: Thing
definition: A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities
imported from: pato.owl
has_alternative_id: PATO:0000072
has_exact_synonym: trait
has_obo_namespace: quality
id: PATO:0000001

color
type: Class
subclass of: physical quality
definition: A composite chromatic quality composed of hue, saturation and intensity parts.
imported from: pato.owl
has_alternative_id: PATO:0000020
has_exact_synonym: colour
has_exact_synonym: relative color
has_obo_namespace: quality
id: PATO:0000014
in_subset: attribute slim

rate
type: Class
subclass of: process quality
definition: A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time.
imported from: pato.owl
has_obo_namespace: quality
id: PATO:0000161
in_subset: attribute slim
in_subset: scalar slim

red
type: Class
subclass of: color
definition: A color hue with high wavelength of the long-wave end of the visible spectrum, evoked in the human observer by radiant energy with wavelengths of approximately 630 to 750 nanometers.
imported from: pato.owl
has_obo_namespace: quality
id: PATO:0000322
in_subset: mpath slim
in_subset: value slim

physical quality
type: Class
subclass of: physical object quality
definition: A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities.
imported from: pato.owl
has_alternative_id: PATO:0002079
database_cross_reference: Wikipedia:Physical_property
has_exact_synonym: relational physical quality
has_obo_namespace: quality
id: PATO:0001018
in_subset: attribute slim

process quality
type: Class
subclass of: quality
definition: A quality which inheres in an process.
imported from: pato.owl
has_alternative_id: PATO:0001239
has_alternative_id: PATO:0001240
has_exact_synonym: quality of a process
has_exact_synonym: quality of occurrent
has_exact_synonym: quality of process
has_exact_synonym: relational quality of occurrent
has_obo_namespace: quality
id: PATO:0001236
comment: See comments of relational quality of a physical entity.

physical object quality
type: Class
subclass of: quality
definition: A quality which inheres in a continuant.
imported from: pato.owl
has_alternative_id: PATO:0001237
has_alternative_id: PATO:0001238
database_cross_reference: snap:Quality
has_exact_synonym: monadic quality of a continuant
has_exact_synonym: multiply inhering quality of a physical entity
has_exact_synonym: quality of a continuant
has_exact_synonym: quality of a single physical entity
has_exact_synonym: quality of an object
has_exact_synonym: quality of continuant
has_narrow_synonym: monadic quality of an object
has_narrow_synonym: monadic quality of continuant
has_obo_namespace: quality
id: PATO:0001241
comment: Relational qualities are qualities that hold between multiple entities. Normal (monadic) qualities such as the shape of a eyeball exist purely as a quality of that eyeball. A relational quality such as sensitivity to light is a quality of that eyeball (and connecting nervous system) as it relates to incoming light waves/particles.

mixed sex
type: Class
subclass of: population quality
definition: A biological sex quality inhering in a population of multiple sexes.
imported from: pato.owl
has_obo_namespace: quality
id: PATO:0001338
in_subset: value slim
comment: For example a mixture of females and male or males and hermaphrodites.

morbidity
type: Class
subclass of: population quality
definition: A quality inhering in a population by virtue of the proportion of its members that are ill at a given time.
imported from: pato.owl
has_obo_namespace: quality
id: PATO:0001415
in_subset: attribute slim
in_subset: scalar slim

population quality
type: Class
subclass of: physical object quality
definition: A quality that inheres in an entire population or part of a population.
imported from: pato.owl
has_obo_namespace: quality
id: PATO:0002003
in_subset: attribute slim

collection of organisms
type: Class
equivalent class: Class
  intersection of: Restriction
    on property: has member
    all values from: organism or virus or viroid
  intersection of: Restriction
    on property: has member
    min qualified cardinality: 2
    on class: organism or virus or viroid
subclass of: object aggregate
subclass of: organismal entity
subclass of: Restriction
  on property: has member
  all values from: organism or virus or viroid
subclass of: Restriction
  on property: has member
  min qualified cardinality: 2
  on class: organism or virus or viroid
example of usage: Examples include: population, community, species (meaning the collection of organisms that makes up a species, not the taxonomic rank), and family.
has curation status: pending final vetting
definition: A material entity that consists of two or more organisms, viruses, or viroids.
alternative term: group of organism
alternative term: organism collection
comment: May be of the same or different species.

population of organisms
type: Class
subclass of: single-species collection of organisms
example of usage: This a general term that can include every organism of a species living in an area or any subset of them. Subclasses can be more specific as needed.
has curation status: pending final vetting
definition: A collection of organisms, all of the same species, that live in the same place.
definition source: ISBN:0878932739
comment: It is sometimes difficult to define the physical boundaries of a population. In the case of sexually reproducing organisms, the individuals within a population have the potential to reproduce with one another during the course of their lifetimes. 'Community', as often used to describe a group of humans, is a type of population. Classes for population already exist in IDO ('organism population', IDO_0000509) and OBI ('population', OBI_0000181). The definitions should be standardized across OBO Foundry ontologies and only one term used.

ecological community
type: Class
equivalent class: Class
  intersection of: community
  intersection of: Restriction
    on property: has member
    min qualified cardinality: 2
    on class: Class
      intersection of: population of organisms
      intersection of: Restriction
        on property: located in
        some values from: site
subclass of: community
subclass of: multi-species collection of organisms
subclass of: Restriction
  on property: has member
  min qualified cardinality: 2
  on class: Class
    intersection of: population of organisms
    intersection of: Restriction
      on property: located in
      some values from: site
has curation status: metadata incomplete
definition: A community of at least two different species, living in a particular area. Must have at least two populations of different species as members.
editor note: Not sure if the equivalancy axiom specifies that both populations are located in the same site.
alternative term: multispecies community
definition source: ISBN:0865423504
comment: Ecological community is defined broadly here, but includes both ecological interactions (inherited from parent term community) and spatial co-existence. It may be used to describe every organisms living in an area, but is often used to refer only to organisms of a particular taxon or guild (e.g., the plant community, the insect community, the herbivore community). The word community, as it often used to describe a group of humans living together, is a type of single-species collection of organisms, not an ecological community.

quality of a population
type: Class
equivalent class: Class
  intersection of: population quality
  intersection of: Restriction
    on property: inheres in
    some values from: population of organisms
subclass of: specifically dependent continuant
subclass of: population quality
subclass of: Restriction
  on property: inheres in
  some values from: population of organisms
has curation status: requires discussion
definition: A quality that inheres in a biological population.
editor note: See Chris's comments on population qualities at: http://code.google.com/p/popcomm-ontology/issues/detail?id=4. These may not belong under BFO:quality. May be better to call them population characteristics, and classify as specifically dependent continuants. Need to look at process profiles in BFO2.
comment: Includes qualities like population size, population growth rate, carrying capacity, immigration rate, emigration rate, fecundity, and death rate. A population quality may depend on the qualities of individual organisms in the population, but cannot be measured or described for a single organism. This term may be replaced by a PATO term.

quality of an ecological community
type: Class
equivalent class: Class
  intersection of: population quality
  intersection of: Restriction
    on property: inheres in
    some values from: ecological community
subclass of: specifically dependent continuant
subclass of: population quality
subclass of: Restriction
  on property: inheres in
  some values from: ecological community
has curation status: requires discussion
definition: A quality that inheres in a community.
editor note: These may not belong under BFO:quality. May be better to call them community characteristics, and classify as specifically dependent continuants. Need to look at process profiles in BFO2.
comment: Includes qualities like diversity, species richness, stability, resilience, community structure, number of trophic levels. A community quality may depend on the qualities of individual organism in the community, but cannot be measured or described for a single individual.

population process
type: Class
subclass of: process
has curation status: metadata incomplete
definition: A process that has as primary participant a population.
comment: Includes processes such as population growth, extinction, evolution, selection, and adaptation. Population processes may depend on the processes of individual organisms {e.g., population growth reflects the cumulative multicellular organism reproduction (GO:0032504) and death (GO:0016265) of all individuals in a population}, but cannot be described for an individual organism. Some of these processes (e.g., evolution, extinction) can also occur at the species level, so PCO distinguishes between, for example, population extinction and species extinction. The GO has the terms 'multi-organism process' (GO:0051704) and 'intraspecies interactions between organisms' (GO:0051703), but tPCOhese categories are only defined for interactions between two individuals. It is unclear at this point if 'biological process' (GO:0008150) encompasses population processes.

population birth rate
type: Class
subclass of: quality of a population
has curation status: metadata incomplete

population death rate
type: Class
subclass of: quality of a population
has curation status: metadata incomplete

population growth rate
type: Class
subclass of: quality of a population
has curation status: metadata incomplete
editor note: Is a rate a quality? Population growth rate may be better classified as a process profile.

carrying capacity
type: Class
subclass of: quality of a population
has curation status: requires discussion
definition: The maximum number of individuals that can be supported in a population that is growing according to logistic growth.
editor note: Might be better to add this as a data property.
definition source: ISBN:0878932739

community species richness
type: Class
subclass of: quality of an ecological community
has curation status: metadata complete
definition: The number of different species represented in an ecological community.
editor note: This is a quality of an ecological community (PCO_0000002). If your metric includes the abundances of species (evenness) as well as the number, you should use community species diversity (PCO_0000019).
definition source: adapted from http://en.wikipedia.org/wiki/Species_richness

population growth
type: Class
subclass of: population process
has curation status: metadata incomplete
definition: A process that leads to a change in the number of individuals (positive or negative) in a population.

logistic population growth
type: Class
subclass of: population growth
has curation status: metadata incomplete
definition: A population process that leads to an increase in the numbers of individuals in a population following a logistic (S-shaped) curve. Generally occurs when the population has a carrying capacity in a particular habitat.

exponential population growth
type: Class
subclass of: population growth
has curation status: metadata incomplete
definition: A population growth process that leads to an exponential increase in the number of individuals in a population.

predator role
type: Class
subclass of: role
has curation status: uncurated

prey role
type: Class
subclass of: role
has curation status: uncurated

symbiont role
type: Class
subclass of: role
has curation status: uncurated

species as a collection of organisms
type: Class
subclass of: single-species collection of organisms
has curation status: metadata complete
definition: A collection of organisms that has as parts every organism of given species and no organisms of any other species.
editor note: At the moment there is no way to specify in an OWL axiom that the collection includes every individual of a species. This should be added, if possible.
comment: This term is neutral with respect to which organisms are included in a species. Membership will depend on the species concept and the taxonomic assertions used to define the species. These criteria must be specified by the user.

single-species collection of organisms
type: Class
equivalent class: Class
  intersection of: Restriction
    on property: has member
    all values from: organism or virus or viroid
  intersection of: Restriction
    on property: has member
    all values from: Restriction
      on property: member of
      qualified cardinality: 1
      on class: species as a collection of organisms
  intersection of: Restriction
    on property: has member
    min qualified cardinality: 2
    on class: organism or virus or viroid
subclass of: collection of organisms
subclass of: Restriction
  on property: has member
  all values from: organism or virus or viroid
subclass of: Restriction
  on property: has member
  all values from: Restriction
    on property: member of
    qualified cardinality: 1
    on class: species as a collection of organisms
subclass of: Restriction
  on property: has member
  min qualified cardinality: 2
  on class: organism or virus or viroid
has curation status: metadata complete
definition: A material entity that has as parts two or more organisms, viruses, or viroids of the same species and no members of any other species.
alternative term: collection of organisms of the same species

community species diversity
type: Class
subclass of: quality of an ecological community
has curation status: metadata complete
definition: The number of different species that are represented in a given community, weighted by their abundance. Community species diversity can be calculated in different ways, but consists of two components: species richness and species evenness.
editor note: If your metric does not include the abundances of different species, but rather just the numer of species, you should use community species richness (PCO_0000010). More specific subclasses or instances of this class may be created to describe specific ways of measuring diversity.
definition source: adapted from http://en.wikipedia.org/wiki/Species_diversity
comment: The Shannon Index and Simpson Index are examples of ways in which species diversity is quantified.

family
type: Class
subclass of: single-species collection of organisms
has curation status: metadata incomplete
definition: A domestic group, or a number of domestic groups linked through descent (demonstrated or stipulated) from a common ancestor, marriage, or adoption.
editor note: Needs axioms for family relationships.
definition source: http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25173
comment: Family membership through marriage or adoption apply primarily to human families. In most species, family membership is defined by common anscestry.

population extinction
type: Class
subclass of: population process
has curation status: metadata incomplete
definition: A population process that ultimately leads to the death of all individuals in a population.

species extinction
type: Class
subclass of: process
has curation status: metadata incomplete
definition: A process that ultimately leads to the death of all individuals in a population.

community species evenness
type: Class
subclass of: quality of an ecological community
example of usage: If there are 40 foxes, and 1000 dogs, the community is not very even, but if there are 40 foxes and 42 dogs, the community is quite even.
has curation status: metadata complete
definition: A quality of a community that reflects how close in abundance all species in a community are.
definition source: adapted from http://en.wikipedia.org/wiki/Species_evenness

household
type: Class
subclass of: organismal entity
subclass of: Class
  intersection of: Restriction
    on property: has member
    all values from: Homo sapiens
  intersection of: Restriction
    on property: has member
    min qualified cardinality: 1
    on class: Homo sapiens
subclass of: Class
  union of: organism or virus or viroid
  union of: collection of organisms
definition: A material entity that consists of one or more people who live in the same dwelling and also share at meals or living accommodation, and may consist of a single family or some other grouping of people.
term editor: Person: Jie Zheng
definition source: WEB: http://en.wikipedia.org/wiki/Household

red population
type: Class
subclass of: Obsolete Class
has obsolescence reason: example to be eventually removed
comment: This is an example population added to demonstrate the modeling pattern for collections of organisms.
deprecated: true

red organism
type: Class
subclass of: Obsolete Class
has obsolescence reason: example to be eventually removed
comment: An example class added to demonstrate the design pattern for collections of organism. Red organism should be automatically classified as a member of red population when the reasoner is synchronized using a DL query.
deprecated: true

collection of humans
type: Class
equivalent class: Class
  intersection of: single-species collection of organisms
  intersection of: Restriction
    on property: has member
    all values from: Homo sapiens
  intersection of: Restriction
    on property: has member
    min qualified cardinality: 2
    on class: Homo sapiens
subclass of: single-species collection of organisms
subclass of: Restriction
  on property: has member
  all values from: Homo sapiens
subclass of: Restriction
  on property: has member
  min qualified cardinality: 2
  on class: Homo sapiens
has curation status: pending final vetting
definition: A collection of organisms of the same species that has as members only humans.
alternative term: human community
alternative term: human population

community
type: Class
subclass of: collection of organisms
subclass of: Class
  intersection of: Restriction
    on property: has member
    all values from: organism or virus or viroid
  intersection of: Restriction
    on property: has member
    min qualified cardinality: 2
    on class: organism or virus or viroid
has curation status: metadata incomplete
definition: A collection of organisms connected by social or biological relations (biotic interactions).
editor note: Biological or social relations are covered by RO_0002437 (biotically interacts with), but that relations does provide an easy way to specify that two entities are interacting with each other (participating in the same interaction). Until that axiom is specified, the logical definition of this term is incomplete.
comment: These relations can include shared values, occupying the same spatial regkion. A community be be a single species collection of organsisms (as in a human community, which is also a type of population) or a or multi-species collection of organisms (as in an ecological community).

multi-species collection of organisms
type: Class
subclass of: collection of organisms
has curation status: metadata incomplete
definition: A collection of organisms that consists of two or more organisms from at least two species.
editor note: Need to add axiom to specify that it has at a mimum members of two different species.

agricultural household
type: Class
subclass of: household
has curation status: metadata incomplete
definition: A household in which the majority of the income of its members is derived from agricultural activities.
editor note: This is a more narrow definition in which the majority of income of a house comes from agricultural activities, as opposed to the broad definition in which any income comes from agricultural activities. The narrow definition was chosen to be consistent with the SDGIO (UN Sustainable Development Goals) which requested this term.

organismal entity
type: Class
equivalent class: Class
  union of: organism or virus or viroid
  union of: collection of organisms
subclass of: material entity
has curation status: pending final vetting
definition: A material entity that is one or more organisms, viruses or viroids.

pair of interacting organisms
type: Class
subclass of: collection of organisms
subclass of: Restriction
  on property: has member
  all values from: organism or virus or viroid
subclass of: Restriction
  on property: has member
  qualified cardinality: 2
  on class: organism or virus or viroid

pair of interacting organisms of the same species
type: Class
equivalent class: Class
  intersection of: pair of interacting organisms
  intersection of: Restriction
    on property: has member
    all values from: Restriction
      on property: member of
      qualified cardinality: 1
      on class: species as a collection of organisms
subclass of: single-species collection of organisms
subclass of: pair of interacting organisms
subclass of: Restriction
  on property: has member
  all values from: Restriction
    on property: member of
    qualified cardinality: 1
    on class: species as a collection of organisms

taxonomic rank
type: Class
imported from: ncbitaxon.owl
has_obo_namespace: ncbi_taxonomy
comment: This is an abstract class for use with the NCBI taxonomy to name the depth of the node within the tree. The link between the node term and the rank is only visible if you are using an obo 1.3 aware browser/editor; otherwise this can be ignored.

obsolete organismal entity
type: Class
subclass of: Obsolete Class
definition: A material entity that is one or more organisms, viruses or viroids.
has obsolescence reason: wrong IRI form
term replaced by: organismal entity
deprecated: true

Obsolete Class
type: Class

example to be eventually removed
type: NamedIndividual
type: curation status specification

failed exploratory term
type: NamedIndividual
type: obsolescence reason specification
definition: The term was used in an attempt to structure part of the ontology but in retrospect failed to do a good job
term editor: Person:Alan Ruttenberg

metadata complete
type: NamedIndividual
type: curation status specification
definition: Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete.

organizational term
type: NamedIndividual
type: curation status specification
definition: term created to ease viewing/sort terms for development purpose, and will not be included in a release

ready for release
type: NamedIndividual
type: curation status specification
definition: Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking "ready_for_release" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed "ready_for_release" will also derived from a chain of ancestor classes that are also "ready_for_release."

metadata incomplete
type: NamedIndividual
type: curation status specification
definition: Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors.

uncurated
type: NamedIndividual
type: curation status specification
definition: Nothing done yet beyond assigning a unique class ID and proposing a preferred term.

pending final vetting
type: NamedIndividual
type: curation status specification
definition: All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor.

core
type: NamedIndividual
type: Subset
definition: Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes.
term editor: PERSON: Alan Ruttenberg
term editor: PERSON: Melanie Courtot

placeholder removed
type: NamedIndividual
type: obsolescence reason specification

terms merged
type: NamedIndividual
type: obsolescence reason specification
editor note: An editor note should explain what were the merged terms and the reason for the merge.

term imported
type: NamedIndividual
type: obsolescence reason specification
editor note: This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use.

term split
type: NamedIndividual
type: obsolescence reason specification
editor note: This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created.

universal
type: NamedIndividual
type: denotator type
editor note: Hard to give a definition for. Intuitively a "natural kind" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents.
term editor: Alan Ruttenberg
definition source: A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf

defined class
type: NamedIndividual
type: denotator type
definition: A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal
editor note: "definitions", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal.
term editor: Alan Ruttenberg

named class expression
type: NamedIndividual
type: denotator type
definition: A named class expression is a logical expression that is given a name. The name can be used in place of the expression.
editor note: named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions
term editor: Alan Ruttenberg

to be replaced with external ontology term
type: NamedIndividual
type: curation status specification
definition: Terms with this status should eventually replaced with a term from another ontology.
term editor: Alan Ruttenberg
definition source: group:OBI

requires discussion
type: NamedIndividual
type: curation status specification
definition: A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues.
term editor: Alan Ruttenberg
definition source: group:OBI

axiom holds for all times
type: NamedIndividual
definition: ## Elucidation This is used when the statement/axiom is assumed to hold true 'eternally' ## How to interpret (informal) First the "atemporal" FOL is derived from the OWL using the standard interpretation. This axiom is temporalized by embedding the axiom within a for-all-times quantified sentence. The t argument is added to all instantiation predicates and predicates that use this relation. ## Example Class: nucleus SubClassOf: part_of some cell forall t : forall n : instance_of(n,Nucleus,t) implies exists c : instance_of(c,Cell,t) part_of(n,c,t) ## Notes This interpretation is *not* the same as an at-all-times relation

relation has no temporal argument
type: NamedIndividual
definition: ## Elucidation This is used when the first-order logic form of the relation is binary, and takes no temporal argument. ## Example: Class: limb SubClassOf: develops_from some lateral-plate-mesoderm forall t, t2: forall x : instance_of(x,Limb,t) implies exists y : instance_of(y,LPM,t2) develops_from(x,y)

bfo-spec-label
definition source: Person:Alan Ruttenberg

BFO_0000134
elucidation: To say that each spatiotemporal region s temporally_projects_onto some temporal region t is to say that t is the temporal extension of s. (axiom label in BFO2 Reference: [080-003])
elucidation: To say that spatiotemporal region s spatially_projects_onto spatial region r at t is to say that r is the spatial extent of s at t. (axiom label in BFO2 Reference: [081-003])

Axiom
annotated source: BFO_0000134
annotated property: elucidation
annotated target: To say that each spatiotemporal region s temporally_projects_onto some temporal region t is to say that t is the temporal extension of s. (axiom label in BFO2 Reference: [080-003])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/080-003

Axiom
annotated source: BFO_0000134
annotated property: elucidation
annotated target: To say that spatiotemporal region s spatially_projects_onto spatial region r at t is to say that r is the spatial extent of s at t. (axiom label in BFO2 Reference: [081-003])
has axiom label: http://purl.obolibrary.org/obo/bfo/axiom/081-003