getSingleCellExpression.cpp File Reference

#include <Rcpp.h>
#include "include/GatingHierarchy.hpp"
#include "include/GatingSet.hpp"
#include <stdexcept>

Functions
NumericMatrix	maskMatrix (const vector< BoolVec > &indexList, NumericMatrix const &data, bool threshold)
NumericMatrix	getSingleCellExpressionByGate (XPtr< GatingSet > gs, string sampleName, List markers_pops, NumericMatrix data, CharacterVector markers, bool threshold)
NumericMatrix	getSingleCellExpression (XPtr< GatingSet > gs, string sampleName, vector< string > pops, NumericMatrix data, CharacterVector markers, bool threshold)