2024-11-25 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version to 1.0.13.6 * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-11-25 Simon Guest * src/attributes.cpp: fix CPP source having to be writable 2024-11-03 Marco Colombo * vignettes/rmd/Rcpp-FAQ.Rmd: Fixed typos * vignettes/rmd/Rcpp-attributes.Rmd: Idem * vignettes/rmd/Rcpp-extending.Rmd: Idem * vignettes/rmd/Rcpp-introduction.Rmd: Idem * vignettes/rmd/Rcpp-libraries.Rmd: Idem * vignettes/rmd/Rcpp-modules.Rmd: Idem * vignettes/rmd/Rcpp-package.Rmd: Idem * vignettes/rmd/Rcpp-quickref.Rmd: Idem * vignettes/rmd/Rcpp-sugar.Rmd: Idem 2024-11-02 Dirk Eddelbuettel * tests/tinytest.R: Minor code edit, removal of two no longer required setters for tinytest 2024-11-01 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version to 1.0.13.5 * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-10-31 Kevin Ushey * inst/include/Rcpp/r/compat.h: Require R (>= 4.5.0) for new APIs 2024-10-26 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version to 1.0.13.4 * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * .github/workflows/ci.yaml (jobs): Roll checkout action to v4 2024-10-26 Gábor Csárdi * inst/include/Rcpp/exceptions_impl.h: check for DragonFlyBSD to fix compilation 2024-10-07 Iñaki Ucar * inst/include/Rcpp/platform/compiler.h: Uncomment HAS_VARIADIC_TEMPLATES macro definition * src/api.cpp: Simplify checks for variadic templates * inst/include/Rcpp/DataFrame.h: Idem * inst/include/Rcpp/DottedPair.h: Idem * inst/include/Rcpp/Function.h: Idem * inst/include/Rcpp/InternalFunctionWithStdFunction.h: Idem * inst/include/Rcpp/Language.h: Idem * inst/include/Rcpp/Pairlist.h: Idem * inst/include/Rcpp/grow.h: Idem * inst/include/Rcpp/internal/call.h: Idem * inst/include/Rcpp/module/class.h: Idem * inst/include/Rcpp/traits/index_sequence.h: Idem * inst/include/Rcpp/traits/named_object.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem * inst/include/Rcpp/Module.h: Idem + add missing is_void method * inst/tinytest/test_module.R: Add test for void functions and methods 2024-10-04 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version to 1.0.13.3 * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-09-29 Dirk Eddelbuettel * inst/include/Rcpp/vector/Vector.h: Remove a cast as R_xlen_t is returned now 2024-09-17 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-09-12 Iñaki Ucar * vignettes/.gitignore: Refinement to ignore more files under rmd/ * vignettes/pdf/*: Rebuilt with Ghostscript 10.03.1 * vignettes/*.pdf: Idem 2024-08-31 Dirk Eddelbuettel * DESCRIPTION (Authors@R): Added 2024-08-28 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R: Create DESCRIPTION with Auhors@R file * inst/tinytest/test_rcpp_package_skeleton.R: Adjust tests 2024-08-20 Dirk Eddelbuettel * inst/tinytest/test_sugar.R: Skip one more NA related test on arm64 and macOS as failure is seen at r-universe on arm64 * .github/workflows/macos.yaml: Add basic r-ci setup but dialed-down to macOS only (as Linux is covered via multiple Docker setups) 2024-08-19 Dirk Eddelbuettel * Contributing.md: Refreshed content 2024-07-30 Dirk Eddelbuettel * vignettes/rmd/Rcpp-modules.Rmd (are): Add short two-sentence illustration following GitHub issue #1322 2024-07-24 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-07-11 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.13 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem * vignettes/pdf/*: Rebuilt 2024-07-07 Kevin Ushey * inst/include/Rcpp/internal/SEXP_Iterator.h: Avoid using VECTOR_PTR * inst/include/Rcpp/vector/Subsetter.h: Avoid using STRING_PTR * inst/include/RcppCommon.h: Include compatibility defines * src/barrier.cpp: Avoid using {STRING/VECTOR}_PTR * inst/include/Rcpp/r/compat.h: Include compatibility defines 2024-07-05 Kevin Ushey * inst/include/Rcpp/Environment.h: Drop support for UserDefinedDatabase [ merged 2024-07-22 after release of Rcpp 1.0.13 ] * inst/include/Rcpp/Language.h: Avoid using SET_TYPEOF * inst/include/Rcpp/Pairlist.h: Idem * inst/include/Rcpp/r_cast.h: Idem [ merged 2024-07-24 after release of Rcpp 1.0.13 ] 2024-06-22 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-06-11 Kevin Ushey * inst/include/Rcpp/internal/r_vector.h: Use template specializations to avoid DATAPTR usage * inst/include/Rcpp/vector/traits.h: Implement bounds checks in r_vector_cache access * inst/tinytest/cpp/Vector.cpp: Add unit tests * inst/tinytest/test_vector.R: Add unit tests * tests/tinytest.R: Test in serial by default 2024-06-02 Dirk Eddelbuettel * inst/include/Rcpp/internal/export.h: More R_xlen_t switching * inst/include/Rcpp/vector/SubMatrix.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem 2024-06-01 Dirk Eddelbuettel * inst/include/Rcpp/internal/Proxy_Iterator.h (Proxy_Iterator): Switch to R_xlen_t ('clang++-17 -Wconversion -Wno-sign-conversion') * inst/include/Rcpp/DataFrame.h: Idem * inst/include/Rcpp/Vector.h: Idem 2024-05-28 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-05-27 Dirk Eddelbuettel * README.md: Remove link references to StackOverflow * inst/NEWS.Rd: Idem * inst/include/Rcpp/Module.h (S4_CppOverloadedMethods): Add cast to int to avoid warnings under 'clang++-17 -Wconversion -Wno-sign-conversion' * inst/include/Rcpp/vector/Vector.h (Vector): Idem * inst/include/Rcpp/module/class.h: Switch variable to size_t to avoid to avoid warnings under 'clang++-17 -Wconversion -Wno-sign-conversion' * inst/tinytest/testRcppClass/src/init.c: Add void to signature 2024-05-26 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2024-05-23 Andrew Johnson * inst/include/Rcpp/: Added variadic templates to be used instead of the generated code in `Rcpp/generated` and `Rcpp/module` when compiling with C++11 or later. 2024-05-18 Dirk Eddelbuettel * docker/ci-4.3/Dockerfile: Add rcpp/ci-4.3 container for R 4.3.* * .github/workflows/ci.yaml (jobs): Add rcpp/ci-4.3 to matrix 2024-05-16 Dirk Eddelbuettel * README.md: Use tinyverse.netlify.app for dependency badge 2024-03-05 Dirk Eddelbuettel * docker/ci/Dockerfile: Switch the base container to r2u * docker/plus/Dockerfile: Given r2u, install more binaries * README.md: Add r-universe badge 2024-02-21 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * inst/include/Rcpp/r/headers.h: Set R_NO_REMAP (and MAXELTSIZE) only if not already defined (as will be needed with R 4.4.0) 2024-01-09 Dirk Eddelbuettel * README.md: Update usage numbers * README.md: Remove StackOverflow badge which only works for logged-in users and is unsuitable for the README 2024-01-08 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.12 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem * vignettes/pdf/*: Rebuilt 2024-01-01 Dirk Eddelbuettel * vignettes/rmd/Rcpp.bib: Updated to current versions of cited packages * inst/bib/Rcpp.bib: Idem 2023-12-27 Dirk Eddelbuettel * src/api.cpp (type2name): Refine OBJSXP return 2023-12-21 Dirk Eddelbuettel * src/api.cpp (type2name): Recognise OBJSXP added in R 4.4.0 2023-11-28 Dirk Eddelbuettel * inst/tinytest/testRcppInterfaceExporter/R/RcppExports.R: Regenerated * inst/tinytest/testRcppInterfaceExporter/src/RcppExports.cpp: Idem 2023-11-26 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * src/attributes.cpp (generateCpp): Add a format string for Rf_error call to not run afoul of -Wformat-security 2023-11-24 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * inst/include/Rcpp/iostream/Rstreambuf.h: Cast streamsize to int in two spots * inst/include/Rcpp/print.h (warningcall): Add missing '%s' format 2023-11-11 Dirk Eddelbuettel * vignettes/rmd/Rcpp-FAQ.Rmd: Updated and edited * vignettes/pdf/Rcpp-FAQ.pdf: Updated * vignettes/rmd/Rcpp.bib: Updated 2023-10-28 Dirk Eddelbuettel * vignettes/rmd/Rcpp-FAQ.Rmd: Updated and edited * vignettes/pdf/Rcpp-FAQ.pdf: Updated * vignettes/rmd/Rcpp.bib: Updated 2023-10-27 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * R/tools.R: Correct missing Rd macros (spotted by R-devel CMD check) 2023-10-22 Aaron Lun * inst/include/Rcpp/vector/MatrixColumn.h: Cast integer index to R_xlen_t to avoid integer overflow with large matrices. * inst/include/Rcpp/vector/MatrixRow.h: Ditto. * inst/include/Rcpp/vector/Vector.h: Remove stray cast to int that causes overflow when returning the end iterator. 2023-09-30 Dirk Eddelbuettel * vignettes/rmd/Rcpp-introduction.Rmd (Rcpp): Correct caption of third figure (cf GitHub issue #1276) * vignettes/pdf/Rcpp-introduction.pdf: Rebuilt 2023-08-31 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2023-08-29 Iñaki Ucar * R/Attributes.R: Ad-hoc fix for testthat's C entrypoint in RcppExports.cpp 2023-08-03 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2023-08-03 Michael Chirico * src/attributes.cpp: Directly `#include ` for `std::endl` * src/date.cpp: Directly `#include ` for `TRUE` and `FALSE` 2023-07-03 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.11 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem * vignettes/pdf/*: Rebuilt 2023-07-02 Dirk Eddelbuettel * README.md: Update usage numbers in Examples section 2023-07-01 Dirk Eddelbuettel * docker/ci-dev/Dockerfile: Make 'rm' more robust as 'rm -f' * docker/ci-4.2/Dockerfile: Add new container for R 4.2.3 * .github/workflows/ci.yaml (jobs): Add entry for R 4.2.3 2023-06-12 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll micro version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * README.md: Two URL updates for appease R CMD check * DESCRIPTION (Encoding): Somewhat belated addition 2023-04-18 Dirk Eddelbuettel * README.md: Use app.codecov.io as base for codecov link 2023-04-12 Dirk Eddelbuettel * .github/workflows/ci.yaml: Simplified container use 2023-03-27 Dirk Eddelbuettel * .github/workflows/stale.yaml: Roll to v8 2023-03-27 Iñaki Ucar * R/Attributes.R: Remove command quoting, not needed anymore for system2() * inst/tinytest/test_xptr.R: Update copyright 2023-03-26 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * inst/tinytest/test_stats.R: Revisit change from PR #1252; we now use a slightly smaller tolerance to accomodate old and new value * inst/tinytest/test_sugar.R: Protect a small number of tests on NA propagation from running on arm64/Darwin which requires special care 2023-03-25 Iñaki Ucar * R/Attributes.R: Switch to system2 to be able to capture stderr on error 2023-03-24 Dirk Eddelbuettel * docker/ci-dev/Dockerfile: During Debian freeze experimental repo is renamed which leads to a hickup here so temporarily remove list file 2023-03-24 Iñaki Ucar * inst/tinytest/test_xptr.R: Skip some tests on Windows 2023-03-19 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * src/attributes.cpp (RExportsGenerator::writeEnd): Replace a pair of apostrophes with backticks in generated .Call() statemente 2023-02-07 Dirk Eddelbuettel * inst/tinytest/test_stats.R: Use more accurate value in R 4.3.0 2023-02-06 Dirk Eddelbuettel * inst/CITATION: Update to new format preferred by r-devel 2023-02-02 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * inst/include/Rcpp/sugar/functions/sapply.h: Enable compilation under C++20 (using clang++ and its C++ library) via invoke_result 2023-01-29 Iñaki Ucar * inst/tinytest/test_xptr.R: Fix a couple of tests writing to stdout 2023-01-24 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2023-01-24 Lukasz Laniewski-Wollk * R/RcppLdpath.R: CxxFlags() now quotes only non-standard paths on linux 2023-01-22 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.10 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem 2023-01-08 Dirk Eddelbuettel * inst/include/Rcpp/String.h: Address clang++-14 conversion warning * inst/include/Rcpp/sugar/functions/mean.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem * src/attributes.cpp: Idem * src/date.cpp: Idem 2022-12-29 Dirk Eddelbuettel * .github/workflows/docker.yaml (jobs): Update several actions 2022-12-26 Dirk Eddelbuettel * .github/workflows/stale.yaml (jobs): Update actions/stale@v6 2022-11-14 Dirk Eddelbuettel * .github/workflows/ci.yaml (jobs): Update to actions/checkout@v3 2022-10-27 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2022-10-27 Kevin Ushey * inst/tinytest/cpp/coerce.cpp: add coerce unit tests * inst/tinytest/test_coerce.R: idem 2022-10-25 Dirk Eddelbuettel * inst/include/Rcpp/internal/r_coerce.h (coerce_to_string): Replace last remaining sprintf with snprintf 2022-10-12 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * R/Attributes.R (sourceCpp): Protect path to binary from spaces 2022-10-06 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * inst/tinytest/test_dataframe.R (test.DataFrame.PushZeroLength): Add new test * inst/tinytest/cpp/DataFrame.cpp (DataFrame_PushOnEmpty): C++ support for new test 2022-10-04 Dirk Eddelbuettel * inst/include/Rcpp/DataFrame.h (set_type_after_push): Allow zero-row data.frame objects to be grown by push_{back,front}() 2022-09-25 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2022-09-23 Kevin Ushey * R/Module.R: Force 'finalize' method to be materialized 2022-09-20 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * R/Attributes.R: Support C++20, C++23 and C++2b (for experimental / incomplete support) via new plugins 2022-07-27 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2022-07-23 Iñaki Ucar * inst/include/Rcpp/r/headers.h: Unwind protection is enabled by default unless `RCPP_NO_UNWIND_PROTECT` is defined (`RCPP_USE_UNWIND_PROTECT` is not checked anymore and has no effect) * inst/include/Rcpp/vector/Vector.h: Switch evaluation to `Rcpp_eval` * R/Attributes.R: `[[Rcpp::plugins(unwindProtect)]]` is deprecated * inst/tinytest/cpp/stack.cpp: Adapted * inst/tinytest/test_exceptions.R: Adapted * inst/tinytest/test_interface.R: Adapted * inst/tinytest/testRcppInterfaceExporter/src/config.h: Removed 2022-07-10 Dirk Eddelbuettel * docker/ci-4.1/Dockerfile: Add Dockerfile for 4.1 series * .github/workflows/ci.yaml: Add 4.1 to CI matrix * .github/workflows/docker.yaml: Do not rebuild versioned ones 2022-07-02 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.9 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem * vignettes/pdf/*: Rebuilt 2022-07-01 Dirk Eddelbuettel * man/dependsAttribute.Rd: Use https in URL * man/exportAttribute.Rd: Idem * man/interfacesAttribute.Rd: Idem * DESCRIPTION (URL): Idem * README.md: Idem, use Amazon page for Rcpp book 2022-05-26 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2022-05-25 Dirk Eddelbuettel * inst/tinytest/test_string.R: Add C++11 conditioning for new unit tests 2022-05-23 Dean Scarff * inst/include/Rcpp/String.h: Make less copies of strings via move semantics and preserving the buffer/SEXP representation when copying * inst/include/RcppCommon.h: include for std::move * inst/tinytest/cpp/String.cpp: Add unit tests * inst/tinytest/test_string.R: Add unit tests 2022-05-12 Dirk Eddelbuettel * docker/ci/Dockerfile: Added xml2, also use more r-cran-* binaries 2022-05-12 Marco Colombo * vignettes/rmd/Rcpp-FAQ.Rmd: Fixed typo 2022-04-03 Dirk Eddelbuettel * vignettes/rmd/Rcpp-FAQ.Rmd: Add paragraph about Date(time) not being aimed at parsing large quantities at once * vignettes/pdf/Rcpp-FAQ.pdf: Idem * vignettes/rmd/Rcpp.bib: Add four entries * inst/bib/Rcpp.bib: Idem 2022-03-14 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2022-03-13 Iñaki Ucar * src/barrier.cpp: Untag tokens upon removal from the precious list, so that the internal reference counter can be safely decremented by R 2022-03-13 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * tests/tinytest.R: Disable full tests on four-digits release to not exceed CRAN test time preference 2022-03-10 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/tinytest/cpp/sugar.cpp: Also conditionally replace std::unary_function with std::function * vignettes/rmd/Rcpp-sugar.Rmd: Replace std::unary_function example with std::function (implicitly requiring C++ in vignette example) * vignettes/rmd/Rcpp-FAQ.Rmd: Idem 2022-03-09 Dirk Eddelbuettel * inst/include/Rcpp/Language.h: To quieten compilations, replace std::(unary|binary)_function with std::function for C++11 or later * inst/include/Rcpp/StringTransformer.he: Idem 2022-01-21 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2022-01-20 Dirk Eddelbuettel * src/attributes.cpp: Make three small changes to permit compilation under C++98 now (while we consider just turning to C++11 overall) 2022-01-14 Dirk Eddelbuettel * inst/tinytest/test_packageversion.R: Comparison to 'dev' revision version now tolerant of optional trailing zero (e.g. 1.0.8.0) 2022-01-11 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.8 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem * vignettes/pdf/*: Rebuilt * inst/include/Rcpp/r/headers.h: STRICT_R_HEADERS set by default unless override RCPP_NO_STRICT_HEADERS is set (cf issue #1158) 2022-01-10 Dirk Eddelbuettel * vignettes/rmd/Rcpp.bib: Updated CRAN and R references * inst/bib/Rcpp.bib: Idem * vignettes/rmd/getCurrentVersionsOfCitedPackages.R: Updated 2022-01-01 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/NEWS.Rd: Added entries for a few PRs since last release * vignettes/rmd/Rcpp.bib: Provide both url and doi entries * inst/bib/Rcpp.bib: Idem 2021-12-28 Dirk Eddelbuettel * README.md: Add section on performance 2021-12-24 Dirk Eddelbuettel * README.md: Update usage counts 2021-12-16 Dirk Eddelbuettel * vignettes/rmd/Rcpp.bib: Update JSS references to new doi scheme, update http URL links to https * inst/bib/Rcpp.bib: Idem 2021-12-10 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2021-12-08 Dirk Eddelbuettel * inst/include/Rcpp/Rcpp: Added as new entry point * inst/include/Rcpp/Light: Added as lighter-weight entry point * inst/include/Rcpp/Lighter: Idem * inst/include/Rcpp/Lightest: Idem 2021-11-30 Dirk Eddelbuettel * README.md: Remove Travis badge * .travis.yml: Removed 2021-11-15 Dirk Eddelbuettel * docker/ci/Dockerfile: Minor cleanup 2021-11-14 Dirk Eddelbuettel * R/RcppLdpath.R: Simplified as we no longer need to worry about CXX0X 2021-11-11 Kevin Ushey * R/RcppLdpath.R: CxxFlags() now quotes its include path 2021-10-15 Travers Ching * inst/tinytest/testRcppAttributePackage: Tests `signature` attribute * inst/tinytest/test_attribute_package.R: Tests `signature` attribute 2021-10-13 Dirk Eddelbuettel * README.md: Switch JSS url to doi form per JSS request * man/Rcpp-package.Rd: Idem * man/RcppLdFlags.Rd: Idem * inst/CITATION: Only use doi entries in three citEntry blocks 2021-10-11 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * .codecov.yml (comment): Disable codecov comments on PRs 2021-10-10 Travers Ching * src/attributes.cpp: Add `signature` attribute and syntax checks 2021-10-02 Dirk Eddelbuettel * .github/workflows/docker.yaml (jobs): Add container builder action 2021-10-01 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Updated 2021-09-29 Iñaki Ucar * inst/include/Rcpp/XPtr.h: Check for new define `RCPP_USE_FINALIZE_ON_EXIT` to flip the value of XPtr's `finalizeOnExit` parameter from false (default) to true. * inst/tinytest/test_xptr.R: Added test for this functionality. 2021-09-27 Dirk Eddelbuettel * README.md: Added total downloads badge 2021-09-06 Dirk Eddelbuettel * docker/ci-4.0/Dockerfile: Using R 4.0.5 to build ci-4.0 * .github/workflows/ci.yaml (jobs): Also run against R 4.0.* 2021-09-05 Dirk Eddelbuettel * inst/examples/Misc/piSugar.cpp (piSugar): Remove spurious call to RNGScope we do not need with Rcpp Attributes * inst/examples/RcppGibbs/RcppGibbs.R (Rgibbs): Comment on two uses of RNGScope as historical in pre-Attributes code * inst/examples/RcppGibbs/timeRNGs.R: Idem for one more 2021-08-05 Dirk Eddelbuettel * inst/bib/Rcpp.bib: Use https for CRAN URLs * vignettes/rmd/Rcpp.bib: Idem 2021-07-25 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2021-07-24 Dirk Eddelbuettel * vignettes/rmd/Rcpp-FAQ.Rmd: New entry on growing vectors 2021-07-08 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * cleanup: Check for optional vignettes/rmd before trying to access it 2021-07-06 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.7 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem * vignettes/pdf/*: Rebuilt 2021-07-05 Iñaki Ucar * src/barrier.cpp (Rcpp_precious_remove): Protect from call with wrong token when unloading modules compiled under earlier version 2021-07-02 Dirk Eddelbuettel * inst/include/Rcpp/r/headers.h: Update notice as January 2022 release will remove protection for STRICT_R_HEADERS making it default 2021-05-27 Dirk Eddelbuettel * inst/tinytest/cpp/rcppversion.cpp (checkVersion): Allow for more than four components of a development version number * inst/tinytest/test_packageversion.R: Idem * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Clarify in comment 2021-05-13 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2021-05-09 Dirk Eddelbuettel * inst/include/RcppCommon.h: Add cfloat header 2021-04-09 Dirk Eddelbuettel * inst/include/Rcpp/hash/IndexHash.h: Silence one comparison, update use of unsigned int to uint32_t throughout 2021-03-22 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2021-03-21 Dirk Eddelbuettel * inst/include/Rcpp/api/meat/message.h: Add wrapper for base::message * inst/include/Rcpp/api/meat/meat.h: Include new file * inst/tinytest/test_misc.R: Simple test * inst/tinytest/cpp/misc.cpp (messageWrapper): Test support 2021-02-23 Dirk Eddelbuettel * Contributing.md: Update unit test link to tinytest 2021-02-08 Dirk Eddelbuettel * DESCRIPTION (Author): Add Inaki to the team 2021-02-01 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * README.md: Mention the Rcpp drap repo and its release candidates in installation section 2021-01-30 Iñaki Ucar * inst/include/test_global_rostream.R: Added test new (optionally) global Rcout and Rcerr objects 2021-01-28 Iñaki Ucar * inst/include/Rcpp/iostream/Rstreambuf.h: Support for global Rcout/Rcerr by defining `-DRCPP_USE_GLOBAL_ROSTREAM`; this mimics std::cout/cerr; initialization code is automatically generated. * inst/include/Rcpp/routines.h: Ditto * src/api.cpp: Ditto * src/attributes.cpp: Ditto * src/rcpp_init.cpp: Ditto 2021-01-21 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/include/Rcpp/DataFrame.h: Remove unused variable * R/Attributes.R (sourceCpp): Support argument echo to be passed to source() to silence optional R evaluation 2021-01-19 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/include/RcppCommon.h: Preverse existing API and offer new token-based API alongside via Rcpp_Precious{Preserve,Release} * inst/include/Rcpp/String.h: Use Rcpp_Precious{Preserve,Release} * inst/include/Rcpp/storage/PreserveStorage.h: Ditto 2021-01-17 Iñaki Ucar * inst/include/Rcpp/String.h: Use Rcpp_{Preserve,Release}Object throughout which connects to Rcpp_precious_* routines * inst/include/Rcpp/exceptions.h: Use Rcpp_ReleaseObject * inst/include/Rcpp/routines.h: Several corrections and refinements * inst/include/Rcpp/storage/PreserveStorage.h: Ditto * inst/include/Rcpp/traits/named_object.h: Ditto * inst/include/Rcpp/unwuindProtect.h: Ditto * inst/include/RcppCommon.h: Ditto * src/barrier.cpp: Ditto 2021-01-17 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem [ these were originally committed 17 May 2020 and have been rebased ] * src/barrier.cpp: Implement Rcpp_precious_{init,teardown,preserve,remove} * src/rcpp_init.c: Register cpp_precious_{init,teardown,preserve,remove} and call from R_{init,unload}_Rcpp * inst/include/Rcpp/routines.h: Declare Rcpp_precious_{init,teardown, preserve,remove} * inst/include/Rcpp/exceptions.h: Use Rcpp_precious_remove * inst/include/Rcpp/traits/named_object.h: Use Rcpp_precious_{preserve,remove} * inst/include/Rcpp/unwuindProtect.h: Use Rcpp_precious_preserve * inst/include/RcppCommon.h: Use Rcpp_precious_{preserve,remove} 2021-01-16 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * tests/tinytest.R: Test for CODECOV when deciding to run extensive tests or just a subset, and set CI=true to enable run full set * .github/workflows/stale.yaml: Run weekly instead of daily * src/attributes.cpp: Additional #nocov tag(s) * R/Attributes.R: Idem * R/Module.R: Idem * R/Rcpp.package.skeleton.R: Idem * R/RcppClass.R: Idem * R/RcppLdpath.R: Idem * src/attributes.cpp: Support include files with dots in package name 2021-01-14 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.6 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem 2021-01-13 Dirk Eddelbuettel * vignettes/rmd/Rcpp.bib: Updated package versions * inst/bib/Rcpp.bib: Idem 2021-01-02 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R: Wrap any() around grepl() 2020-12-22 Dirk Eddelbuettel * .github/workflows/stale.yaml: Adding a staleness monitor labeling and ultimately closing issues and PRs after suitably long windows 2020-12-16 Dirk Eddelbuettel * inst/NEWS.Rd: Updated for recent activity * .github/workflows/ci.yaml: Add container-based CI runner * README.md: Add new badge 2020-11-06 Dirk Eddelbuettel * DESCRIPTION: More URL updates, e.g. http -> https * README.md: Ditto * inst/CITATION: Ditto * man/Rcpp-package.Rd: Ditto * inst/CITATION: Change from PeerJ Preprint to TAS 2020-10-25 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/include/Rcpp/generated/InternalFunction__ctors.h: Switch XPtr finalizer argument from false to true 2020-10-22 Dirk Eddelbuettel * inst/include/Rcpp/lang.h: Remove spurious whitespace * vignettes/.gitignore: Refined to no longer ignore pdf files * vignettes/pdf/*: Added * inst/NEWS.Rd: Updated for two PRs 2020-10-21 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-10-19 Benjamin Christoffersen * src/attributes.cpp: Initialize two private bool variable in default constructor to avoid santizer warning 2020-08-20 Mattias Ellert * inst/include/Rcpp/lang.h: Remove obsolete and confusing comment 2020-08-05 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-07-09 Walter Somerville * inst/include/Rcpp/DataFrame.h: Warn when data.frame has varying length * inst/tinyTest/cpp/DataFrame.cpp: Test added * inst/tinyTest/test_dataframe.R: Idem 2020-07-07 Walter Somerville * inst/include/Rcpp/DataFrame.h: Implement explict push_back and push_front for DataFrame, which takes care to set the class and row.names attributes. * inst/tinyTest/test_dataframe.R: Add in tests for push_back/push_front * inst/tinyTest/cpp/DataFrame.cpp: Idem 2020-07-06 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-07-06 Kevin Ushey * inst/include/Rcpp/module/class.h: EXTPTR_PTR -> R_ExternalPtrAddr * src/api.cpp: Idem * src/module.cpp: Idem 2020-07-01 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.5 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem 2020-06-27 Dirk Eddelbuettel * docker/ci/Dockerfile: Revert back to standard r-base container * docker/plus/Dockerfile: Also install bit64 2020-06-19 Dirk Eddelbuettel * .travis.yml: Determine package name and version from DESCRIPTION, switch to bionic 2020-06-14 Dirk Eddelbuettel * inst/bib/Rcpp.bib: Add John's new 'S, R, and Data Science' article * vignettes/rmd/Rcpp.bib: Idem 2020-06-07 Dirk Eddelbuettel * .travis.yml (jobs): Replace R 3.4.3 with R 3.6.3 in matrix 2020-06-05 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * R/Rcpp.package.skeleton.R: Remove a remaining NAMESPACE entry for a temporary function symbol; ensure an exportPattern is set 2020-05-18 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-05-17 Kevin Ushey * inst/include/Rcpp/String.h: Don't preserve returned SEXP in wrap * inst/include/RcppCommon.h: Simplify 2020-04-30 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * vignettes/rmd/Rcpp-libraries.Rmd: Add new vignette source * vignettes/rmd/Rcpp.bib: Complete references * inst/bib/Rcpp.bib: Idem 2020-04-26 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-04-25 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/sample.h: Replace R_alloc() with a standard vector allocation to reduce memory consumption in sample * docker/ci/Dockerfile: Update for R 4.0.0 (with a temporary diversion to rocker/r-base:4.0.0, and all-source installations) * vignettes/rmd/Makefile: Add bibtex call to JSS 2011 paper builds 2020-04-16 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-04-15 Kevin Ushey * inst/include/Rcpp/String.h: Avoid 'debug' namespace collisions * inst/include/Rcpp/macros/debug.h: Idem * inst/include/Rcpp/macros/macros.h: Idem 2020-04-15 Uwe Korn * inst/include/Rcpp/DataFrame.h: Explicit call to scalar std::abs 2020-04-11 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-04-10 Kevin Ushey * inst/include/Rcpp/macros/macros.h: Safer definition of short_file_name * inst/include/Rcpp/String.h: Idem * inst/include/Rcpp/macros/debug.h: Idem * src/api.cpp: Idem 2020-04-10 Dirk Eddelbuettel * inst/tinytest/test_exceptions.R: Skip parts of file if on Solaris 2020-04-02 Dirk Eddelbuettel * inst/NEWS.rd: Mark as patch release 1.0.4.6 * inst/tinytest/test_exceptions.R: If running skip remainder of file on Windows to not trigger failed test 2020-04-01 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2020-03-31 Dirk Eddelbuettel * docker/ci-dev/Dockerfile: Also install the 'codetools' package 2020-03-31 Kevin Ushey * R/Attributes.R: Fix for sourceCpp() on Windows w/R-devel 2020-03-28 Dirk Eddelbuettel * inst/examples/RcppGibbs/RcppGibbs_Updated.R: Updated example 2020-03-24 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/include/Rcpp/Environment.h: Added two Shield wrappers around Rf_langX calls 2020-03-23 Dirk Eddelbuettel * .travis.yml (script): Run coverage as parallel step 2020-03-22 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * docker/ci-3.4/Dockerfile: Added * docker/ci-3.5/Dockerfile: Idem * docker/ci-dev/Dockerfile: Idem * .travis.yml (jobs): Expand to matrix 2020-03-22 Mattias Ellert * inst/include/Rcpp/exceptions_impl.h: Add include guard, Make sure RCPP_DEMANGLER_ENABLED is always defined, Add missing inline qualifier 2020-03-18 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/include/Rcpp/lang.h: Define Rcpp_list{2,3,4,5} in the Rcpp namespace * DESCRIPTION: Remove versioned depends on R (>= 3.0.0) from 2013 2020-03-17 Davis Vaughan * inst/include/Rcpp/lang.h: Inline Rcpp_list6() to support R 3.3. 2020-03-17 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version (twice) * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Updated 2020-03-15 Kevin Ushey * inst/include/Rcpp/exceptions_impl.h: Ensure is included into global namespace; refactor detection of demangler support 2020-03-13 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.4 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * vignettes/rmd/Rcpp.bib: Idem * inst/bib/Rcpp.bib: Idem 2020-03-12 Dirk Eddelbuettel * vignettes/rmd/Rcpp.bib: Updated to current package versions * inst/bib/Rcpp.bib: Idem 2020-02-24 Dirk Eddelbuettel * inst/include/Rcpp/exceptions_impl.h: Remove spurious semicolon 2020-02-23 Dirk Eddelbuettel * inst/include/Rcpp/generated/Vector__create.h: Added #nocov tags * inst/include/Rcpp/exceptions_impl.h: Idem * src/api.cpp: Idem plus some whitespace realignment 2020-02-13 Dirk Eddelbuettel * README.md: Add a Debian badge 2020-02-12 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * README.md: Added indirect CRAN use badge 2020-02-09 Joshua Pritikin * inst/include/Rcpp.h: Include exceptions_impl.h * inst/include/Rcpp/exceptions.h: Make thread-safe * inst/include/Rcpp/exceptions_impl.h: New home for code moved from src/api.cpp 2020-01-05 Dirk Eddelbuettel * inst/include/Rcpp/exceptions.h: A few more #nocov tags * inst/include/Rcpp/generated/Vector__create.h: Idem, plus whitespace 2020-01-04 Dirk Eddelbuettel * R/Attributes.R: A few more #nocov tags 2020-01-01 Dirk Eddelbuettel * inst/include/Rcpp/module/Module.h: A few more #nocov tags * inst/include/Rcpp/XPtr.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem 2019-12-31 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2019-12-29 Qiang Kou * inst/include/Rcpp/vector/Matrix.h: Ensure scalar OP matrix do not change right-hand side in operation * inst/tinytest/test_matrix.R: New tests * inst/tinytest/cpp/Matrix.cpp: Idem 2019-12-20 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2019-12-18 Dirk Eddelbuettel * inst/include/Rcpp/XPtr.h: Additional null check, refactored 2019-12-17 Kirill Müller * inst/include/Rcpp/XPtr.h: Clear external pointer before finalizer 2019-12-17 Dirk Eddelbuettel * R/Attributes.R (sourceCpp): Very minor cosmetic changes 2019-12-15 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2019-12-14 Dirk Eddelbuettel * R/Attributes.R (sourceCpp): Support new argument windowsDebugDLL to create a debug DLL, supported on Windows only * man/sourceCpp.Rd: Document it * src/date.cpp: A few more #nocov tage 2019-12-13 Dirk Eddelbuettel * src/api.cpp: A few more #nocov tags * src/attributes.cpp: Idem * src/barrier.cpp: Idem 2019-12-08 Dirk Eddelbuettel * tests/tinytest.R: Turn verbose tests on in dev and on Travis * inst/tinytest/test_client_package.R: Finer-grained skip messages * inst/tinytest/test_module_client_package.R: Idem * inst/tinytest/test_expose_class.R: Idem * inst/tinytest/test_interface.R: Idem * inst/tinytest/test_rcpp_package_skeleton.R: Idem * inst/tinytest/test_reference.R: Idem * inst/tinytest/test_*.R: Streamlined initial test and sourceCpp call * src/attributes.cpp: Remove dangling '#nocov end' 2019-12-07 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * inst/tinytest/test_binary_package.R: Finer-grained skip messages * inst/tinytest/test_misc.R: Add commented-out test that fails * tests/tinytest.R: Minor edit * docker/ci/Dockerfile: Add curl and ssl -dev packages needed for covr 2019-12-05 Dirk Eddelbuettel * vignettes/rmd/Rcpp-FAQ.Rmd (Rcpp): Add entry about "'dataptr' (or 'enterRNGScope') not provided by Rcpp" recommending proper importFrom 2019-12-03 Dirk Eddelbuettel * docker/ci/Dockerfile: Lighter builds as fewer Suggests: * docker/plus/Dockerfile: Take packages moved from ci/Dockerfile 2019-12-01 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * DESCRIPTION (Suggests): Remove knitr, rmarkdown, pinp * DESCRIPTION (VignetteBuilder): Remove knitr 2019-11-26 Dirk Eddelbuettel * inst/tinytest/test_embedded_r.R: Use sink to suppress noisy output, reenable tests (still conditional on usual environment variable) 2019-11-25 Dirk Eddelbuettel * inst/tinytest/cpp/Vector.cpp (no_op): Suppress compiler warning 2019-11-24 Dirk Eddelbuettel * DESCRIPTION (Suggests): Add tinytest, remove RUnit * tests/doRUnit.R: Removed * tests/tinytest.R: Added * tests/tinytest.R: Converted from RUnit to tinytest * inst/tinytest/test_algorithm.R: Idem * inst/tinytest/test_as.R: Idem * inst/tinytest/test_binary_package.R: Idem (but inactive for now) * inst/tinytest/test_client_package.R: Idem (but inactive for now) * inst/tinytest/test_dataframe.R: Idem * inst/tinytest/test_date.R: Idem (but condition two test sets on TZ) * inst/tinytest/test_dispatch.R: Idem * inst/tinytest/test_embedded.R: Idem * inst/tinytest/test_environments.R: Idem * inst/tinytest/test_exceptions.R: Idem * inst/tinytest/test_exceptions_nocall.R: Idem * inst/tinytest/test_expose_class.R: Idem * inst/tinytest/test_function.R: Idem * inst/tinytest/test_interface.R: Idem (but inactive for now) * inst/tinytest/test_internal_function.R: Idem * inst/tinytest/test_internal_function_cpp11.R: Idem * inst/tinytest/test_language.R: Idem * inst/tinytest/test_listof.R: Idem * inst/tinytest/test_matrix.R: Idem * inst/tinytest/test_misc.R: Idem * inst/tinytest/test_modref.R: Idem * inst/tinytest/test_module.R: Idem * inst/tinytest/test_module_client_package.R: Idem * inst/tinytest/test_na.R: Idem * inst/tinytest/test_quickanddirty.R: Idem * inst/tinytest/test_rcpp_package_skeleton.R: Idem * inst/tinytest/test_reference.R: Idem * inst/tinytest/test_rmath.R: Idem * inst/tinytest/test_robject.R: Idem * inst/tinytest/test_s4.R: Idem * inst/tinytest/test_stack.R: Idem * inst/tinytest/test_stats.R: Idem * inst/tinytest/test_string.R: Idem * inst/tinytest/test_subset.R: Idem * inst/tinytest/test_sugar.R: Idem * inst/tinytest/test_sugar_var.R: Idem * inst/tinytest/test_support.R: Idem * inst/tinytest/test_system.R: Idem * inst/tinytest/test_table.R: Idem * inst/tinytest/test_vector.R: Idem * inst/tinytest/test_vector_old.R: Idem * inst/tinytest/test_wrap.R: Idem * inst/tinytest/test_wstring.R: Idem * inst/tinytest/test_xptr.R: Idem * inst/tinytest/cpp/*: C++ support files for tests * inst/tinytest/*: Other support files and directories from unitTests * R/unitTests.R: Removed as tied to RUnit setuo * inst/tinytest/test_attributes.R: Added test for error with non-existing package in cppFunction 2019-11-23 Dirk Eddelbuettel * docker/ci/Dockerfile: Add tinytest to ci Docker image 2019-11-20 Dirk Eddelbuettel * R/Attributes.R: Test for and report unavailable 'LinkingTo' package 2019-11-19 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2019-11-18 Kun Ren * src/attributes.cpp: Add invisible param to export attribute (#1024) * vignettes/rmd/Rcpp-attributes.Rmd: Add an section of Returning invisible object 2019-11-13 Dirk Eddelbuettel * .github/ISSUE_TEMPLATE.md: Another small edit * .github/PULL_REQUEST_TEMPLATE.md: Idem 2019-11-13 Stephen Wade * inst/include/Rcpp/XPtr.h: Delete delegating ctor (follow-up #1012) * inst/unitTests/runit.XPTr.R: Reinsert self-tag test on Windows 2019-11-11 Dirk Eddelbuettel * inst/unitTests/runit.packageversion.R: New test * inst/unitTests/cpp/rcppversion.cpp: Cpp portion of test 2019-11-10 Dirk Eddelbuettel * .github/: Add files CONTRIBUTING.md, FUNDING.yml, ISSUE_TEMPLATE.md and PULL_REQUEST_TEMPLATE.md * inst/include/Rcpp/config.h: Correct RCPP_VERSION and RCPP_DEV_VERSION to 1.0.3 2019-11-09 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version 2019-11-09 TJ McKinley * R/Attributes.R: Correct how cppFunction() deals with multiple depends arguments 2019-11-08 Romain Francois * inst/include/Rcpp/lang.h: Safer Rcpp_list* and Rcpp_lang* * inst/include/Rcpp/Function.h: Add Function.invoke() for operator() * inst/include/Rcpp/generated/Function__operator.h: Safer Function.operator() using Function.invoke() 2019-11-08 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Release 1.0.3 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * inst/bib/Rcpp.bib: Idem * vignettes/Rcpp.bib: Idem 2019-11-06 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/XPtr.h: Provided fallback for old constructor when C++11 is not available (follow-up to #1003) * inst/unitTests/runit.XPTr.R (test.XPtr): On Windows (as a proxy for old compilers) do not test new feature * tests/doRUnit.R: Protect printing to /tmp from Windows use * vignettes/rmd/Rcpp.bib: Updated * inst/bib/Rcpp.bib: Idem 2019-11-02 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/Reference.h: Shield Rf_mkstring inside Rf_lang2 * inst/include/Rcpp/Environment.h: Idem (inside Rf_lang4) * inst/include/Rcpp/proxy/FieldProxy.h: Idem (inside Rf_lang3 and 4) 2019-10-31 Romain Francois * inst/include/Rcpp/DataFrame.h: Protect temporaries from gc * inst/include/Rcpp/Environment.h: Idem * inst/include/Rcpp/r_cast.h: Idem 2019-10-27 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/unitTests/runit.exposeClass.R: Updated to pass with r-devel * vignettes/rmd/Rcpp-FAQ.Rmd: Two new short section on speedier compilation and lack of exceptions / stop() across shared libraries 2019-10-26 Dirk Eddelbuettel * vignettes/Rcpp-package.Rnw: Another wrapper * vignettes/Rcpp-jss-2011.Rnw: Idem * vignettes/Makefile: Refinements * vignettes/rmd/Makefile: Idem * cleanup: Removed bashism, added invocation of make clean 2019-10-23 Dirk Eddelbuettel * vignettes/Rcpp-*.Rnw: Wrappers around pdf/*pdf * vignettes/Makefile: Added 2019-10-21 Dirk Eddelbuettel * vignettes/rmd/*: Moved from parent directory * vignettes/pdf/*: New target directory 2019-10-20 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * vignettes/Rcpp-FAQ.Rmd: Turn off knitr cache * vignettes/Rcpp-introduction.Rmd: Idem * vignettes/Makefile: Add simple Makefile * .Rbuildignore: Exclude vignettes/Makefile 2019-10-19 Stephen Wade * inst/include/Rcpp/XPtr.h: XPtr constructor split up, a single argument does not modify tags and protected data of the external pointer * inst/unitTests/cpp/Xptr.cpp: Added test * inst/unitTests/runit.XPtr.R: Idem 2019-10-14 Dirk Eddelbuettel * README.md: Added CRAN + BioConductor badges for reverse depends, 2019-10-11 Dirk Eddelbuettel * inst/include/Rcpp/exceptions.h: Condition use of typeid() on absence of RCPP_NO_RTTI in two places * inst/include/Rcpp/r/headers.h: RCPP_NO_RTTI implies RCPP_NO_MODULES 2019-10-04 Dirk Eddelbuettel * vignettes/Rcpp-attributes.Rmd: Correct two unevaluated knitr C++ chunks to mode 'Rcpp' rather than the (unregistered) C++ mode * vignettes/Rcpp-extending.Rmd: Minor white-space tweak to avoid paragraph-spacing warnings from latex and its mdframed style * vignettes/Rcpp-modules.Rmd: Idem * vignettes/Rcpp-sugar.Rmd: Idem 2019-10-01 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version 2019-09-30 Kevin Ushey * inst/include/Rcpp.h: add RCPP_NO_MODULES * inst/include/Rcpp/api/meat/is.h: Idem * inst/include/Rcpp/api/meat/meat.h: Idem 2019-09-28 Dirk Eddelbuettel * README.md: Add a stackoverflow tag to indicate where to ask questions, also updated package counts on CRAN and BioC for Rcpp users 2019-08-06 Riccardo Porreca * vignettes/Rcpp-modules.Rmd: Extensive review and edit improving the Modules vignette 2019-08-04 Dirk Eddelbuettel * README.md: Add thre doi badges * inst/NEWS.Rd: Two minor edits 2019-07-21 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version 2019-07-21 Riccardo Porreca * R/Module.R: Use an explicit Rcpp:: in the initalize method for C++ classes wrapped inside modules to ensure proper initialization 2019-07-20 Dirk Eddelbuettel * DESCRIPTION: Release 1.0.2 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * inst/bib/Rcpp.bib: Idem * vignettes/Rcpp.bib: Idem 2019-07-18 Pierrick Roger * src/attributes.cpp: Correct parsing of default function values * inst/unitTests/cpp/attributes.cpp: Added tests * inst/unitTests/runit.attributes.R: Idem 2019-07-16 Dirk Eddelbuettel * debian/: Removed, see https://salsa.debian.org/edd/r-base/ instead 2019-07-04 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated * inst/bib/Rcpp.bib: Idem 2019-05-05 Dirk Eddelbuettel * .Rbuildignore: Small tweak 2019-04-27 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R (Rcpp.package.skeleton): Use getRcppVersion() 2019-04-26 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * R/tools.R (getRcppVersion): More idiomatic code 2019-04-25 Dirk Eddelbuettel * R/tools.R (getRcppVersion): Export R (and dev) package version * man/getRcppVersion.Rd: Documentation for new function * inst/include/Rcpp/config.h (RCPP_VERSION_STRING): New version and development version string #define * src/api.cpp (getRcppVersionStrings): Expose new versions strings * src/internal.h: Register new version string exporter * src/rcpp_init.cpp (callEntries[]): Idem * inst/unitTests/runit.misc.R (test.getRcppVersion): test new function 2019-03-23 Ralf Stubner * vignettes/Rcpp-modules.Rmd: Describe RCPP_EXPOSED_* macros * vignettes/Rcpp-extending.Rmd: Reference Modules extensions 2019-03-23 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/NEWS.Rd: Updated 2019-03-20 James J Balamuta * inst/include/Rcpp/sugar/functions/unique.h: Added decreasing parameter to control sort. * inst/unitTests/runit.sugar.R: Added sort_unique() tests * inst/unitTests/cpp/sugar.cpp: Ditto 2019-03-20 Dirk Eddelbuettel * src/date.cpp: Renamed from Date.cpp * src/module.cpp: Renamed from Module.cpp * src/rcpp_init.cpp: Renamed from Rcpp_init.cpp 2019-03-19 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * tests/doRUnit.R: On Travis always set RunAllRcppTests * docker/ci/Dockerfile: Set environment variables container-wide 2019-03-18 Dirk Eddelbuettel * inst/include/Rcpp/macros/macros.h (END_RCPP_RETURN_ERROR): Add UNPROTECT to reference nprot, also check for stop_sym 2019-03-17 Dirk Eddelbuettel * DESCRIPTION: Release 1.0.1 * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * inst/bib/Rcpp.bib: Idem * vignettes/Rcpp.bib: Idem 2019-03-16 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/unitTests/runit.sugar.R: Set the sample() behaviour to R 3.5.0 as R 3.6.0 has a breaking change (for the better) 2019-03-13 Romain François * inst/include/Rcpp/macros/macros.h: Add UNPROTECT to please rchk 2019-03-12 Romain François * inst/include/Rcpp/api/meat/proxy.h: AttributeProxy::set() with Shield<> and a few related uses of Shield<> to please rchk * inst/include/Rcpp/clone.h: Idem * inst/include/Rcpp/proxy/AttributeProxy.h: Idem * inst/include/Rcpp/proxy/NamesProxy.h: Idem * inst/include/Rcpp/vector/Matrix.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem 2019-02-25 Dirk Eddelbuettel * .travis.yml (after_success): Setting CODECOV_TOKEN to reenable codecov.io coverage as detailed by Ralf in GitHub issue #941 2019-02-16 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/cbind.h: Converted CRLF to CR 2019-02-15 Dirk Eddelbuettel * inst/README: Moved stale file to local/ * inst/THANKS: Idem 2019-02-13 Dirk Eddelbuettel * DESCRIPTION (Version, Date): New minor version 2019-02-11 Kevin Ushey * R/Attributes.R: better handle pre-existing RcppExports.cpp, RcppExports.R when calling compileAttributes() 2019-02-09 Ralf Stubner * Rcpp-modules.Rmd: Added example for .factory 2019-01-31 Dirk Eddelbuettel * inst/include/Rcpp/protection/Shelter.h (Rcpp): Only increase nprotected count if object is not NULL (suggested by Stepan Sindelar) 2018-12-26 Zhuoer Dong * vignettes/Rcpp-quickref.Rmd: Fix three bugs: use `Named()`, define `glob`, `glob.ls(TRUE)`. 2018-12-01 Dirk Eddelbuettel * R/Attributes.R: Added new 'c++2a' plugin for '-std=c++2a' compilation standard supported by g++ 8 or later 2018-11-11 Dirk Eddelbuettel * inst/include/Rcpp/vector/Subsetter.h (check_indices): More informative error message as suggested by KK 2018-11-09 William Nolan * inst/include/Rcpp/vector/Subsetter.h: Fixed to use R_xlen_t instead of int for indexing and added warning when indexing by IntegerVector (only for large enough vectors) 2018-11-05 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Version 1.0, and happy 10th birthday! * inst/include/Rcpp/config.h: Idem * inst/NEWS.Rd: Idem * inst/bib/Rcpp.bib: Idem * vignettes/Rcpp.bib: Idem 2018-11-04 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * README.md: Updated stated package and test numbers 2018-10-25 Kevin Ushey * inst/include/Rcpp/String.h: Use Rf_mkCharLenCE() as appropriate * inst/unitTests/cpp/String.cpp: Add unit tests * inst/unitTests/runit.String.R: Add unit tests 2018-10-12 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * tests/doRUnit.R: Simplified to something similar to what RcppArmadillo (and other packages) had for a while now * vignettes/Rcpp-unitTests.Rnw: Removed as less useful now 2018-10-08 JJ Allaire * R/Attributes.R: Sort the files scanned for attributes in the C locale for stable output across systems. 2018-10-07 Ralf Stubner * vignettes/Rcpp-extending.Rmd: Correct EXPORT to EXPOSED in displays of the corresponding macro, and remove two spurious semicolons 2018-10-02 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem 2018-10-02 Romain Francois * inst/include/Rcpp/vector/Matrix.h: Init nrow in Matrix(no_init) ctor * inst/unitTests/runit.Matrix.R: New test * inst/unitTests/cpp/Matrix.cpp: Idem 2018-09-30 Dirk Eddelbuettel * man/RcppUnitTests.Rd: Remove \details{} with conditional code which R-devel (as of Sep 28) warns about as empty 2018-09-28 Dirk Eddelbuettel * .travis.yml (env): Set distinct build and check options to skip tests of vignettes 2018-09-27 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/date_datetime/Date.h: Remove the empty destructor to make g++-9 (prerelease) happy [CRAN request] * inst/unitTests/runit.Matrix.R: Correct typo 2018-09-27 Romain Francois * inst/include/Rcpp/vector/Matrix.h: Fix Matrix(no_init(int,int)) constructor * inst/unitTests/runit.Matrix.R: test for above * inst/unitTests/cpp/Matrix.cpp: same 2018-09-26 Dirk Eddelbuettel * docker/ci/Dockerfile: Set env var RunAllRcppTests=yes * .travis.yml: Do not set env var here as needed in Docker 2018-09-21 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.19 * inst/NEWS.Rd: Idem * inst/bib/Rcpp.bib: Idem * vignettes/Rcpp.bib: Idem * inst/include/Rcpp/config.h: Idem * R/RcppLdpath.R (RcppLdPath, RcppLdFlags, CxxFlags, RcppCxx0xFlags): After discussion with CRAN, do not mark as .Deprecated() as too many packages are involved. This will need to be phased in more slowly. 2018-09-20 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rmd: Set 'eval=FALSE' on another RcppArmadillo example to not create a build-time dependency 2018-09-18 JJ Allaire * src/attributes.cpp: Add support for [[Rcpp::init]] attribute * vignettes/Rcpp-attributes.Rmd: Documentation for [[Rcpp::init]] attribute 2018-09-17 Dirk Eddelbuettel * inst/include/Rcpp/r/headers.h: Define STRICT_R_HEADERS, but until September 2019 protect by defining RCPP_NO_STRICT_HEADERS * .travis.yml (env): Switch to rcpp/ci for ci use 2018-09-15 Dirk Eddelbuettel * docker/ci/Dockerfile: Move Dockerfile to docker/ci * docker/run/Dockerfile: Add deployment Dockerfile * docker/plus/Dockerfile: Add 'plus-sized' Dockerfile suitable for different add-on packages requiring Rcpp{Armadillo,Eigen,GSL} or BH 2018-09-02 Dirk Eddelbuettel * .travis.yml: Switch to rcpp/rcpp-testing container 2018-08-29 Dirk Eddelbuettel * .travis.yml: Use Dockerfile 2018-08-28 Dirk Eddelbuettel * docker/Dockerfile: Add Dockerfile for use by Travis CI 2018-08-27 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * man/Rcpp-deprecated.Rd: Fix two-char typo/thinko in \link{} 2018-07-29 Dirk Eddelbuettel * README.md: Refreshed via some edits and updates * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2018-07-28 Dirk Eddelbuettel * R/RcppLdpath.R (RcppLdPath, RcppLdFlags, CxxFlags, RcppLdFlags) (RcppCxx0xFlags): Marked as deprecated * man/Rcpp-deprecated.Rd: Add exported functions LdFlags() and RcppLdFlags() as deprecated * man/RcppLdFlags.Rd: Idem 2018-07-27 Dirk Eddelbuettel * man/loadRcppModules-deprecated.Rd: Fix typo; was deprecated in 0.12.5, not 0.16.5 which does not exist 2018-07-26 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rmd: Use collapse: true * vignettes/Rcpp-introduction.Rmd: Idem 2018-07-25 Dirk Eddelbuettel * vignettes/Rcpp-extending.Rmd: Use collapse: true 2018-07-24 Martin Lysy * R/loadRcppClass.R: Search in R module for 'Class' instead of 'CppClass'. * R/exposeClass.R: Fixed 'rename' argument to work as expected. * inst/unitTests/runit.exposeClass.R: Added unit tests for the above. 2018-07-23 Dirk Eddelbuettel * inst/bib/Rcpp.bib: More updates * vignettes/Rcpp.bib: Idem 2018-07-21 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.18 * inst/NEWS.Rd: Idem * inst/bib/Rcpp.bib: Idem * vignettes/Rcpp.bib: Idem * inst/include/Rcpp/config.h: Idem * vignettes/Rcpp.bib: Updated other references * inst/bib/Rcpp.bib: Idem * inst/unitTests/runit.sugar.R: Additional min, max unit tests * inst/unitTests/cpp/sugar.cpp: Idem 2018-07-20 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/max.h: Also consider case of an empty vector * inst/include/Rcpp/sugar/functions/min.h: Idem 2018-07-19 Jack Wasey * inst/include/Rcpp/r_cast.h: Error and abort if debugging for STRSXP 2018-07-24 Martin Lysy * R/loadRcppClass.R: Search in R module for 'Class' instead of 'CppClass'. * R/exposeClass.R: Fixed 'rename' argument to work as expected. * inst/unitTests/runit.exposeClass.R: Added unit tests for the above. 2018-07-12 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2018-07-12 Jack Wasey * R/Attributes.R: Use case-insensitive sort of filenames to make RcppExports more deterministic 2018-07-10 Lionel Henry * inst/include/Rcpp/exceptions.h: Move LongjumpException from the Rcpp::internal namespace to the public Rcpp namespace. If you have a catch-all statement like `catch (...)`, be sure to catch and rethrow Rcpp::LongjumpException to prevent the R longjump from being ignored. * inst/include/Rcpp/macros/macros.h (VOID_END_RCPP): idem * src/attributes.cpp: idem 2018-07-09 Dirk Eddelbuettel * src/Date.cpp: Skip 'tm_gmtoff' on AIX as well (thanks to PR 876 by @ayappanec) 2018-07-05 Lionel Henry * inst/include/Rcpp/api/meat/Rcpp_eval.h: Rename `RCPP_PROTECTED_EVAL` to `RCPP_USE_UNWIND_PROTECT` because the new API is now more general than just evaluation of R code. * inst/NEWS.Rd: idem * inst/unitTests/runit.interface.R: idem * R/unit.tests.R (unitTestSetup): Pass extra arguments to sourceCpp() for easier debugging. * R/Attributes.R (.plugins[["unwindProtect"]]): You can now add `[[Rcpp::plugins(unwindProtect)]]` in one of your source file to enable the new unwind-protect mechanism easily. It appends `-DRCPP_USE_UNWIND_PROTECT` to `PKG_CPPFLAGS`. This is safer than using a `#define` because it ensures unwind-protect is enabled in all compilation units, including RcppExports.cpp. * inst/unitTests/cpp/stack.cpp: Use new plugin to enable unwind-protect. 2018-06-22 Kevin Ushey * inst/include/Rcpp/api/meat/Rcpp_eval.h: Ensure R_BaseEnv is used 2018-06-21 Lionel Henry * inst/include/Rcpp/api/meat/unwind.h: Extract unwind protection from Rcpp::Rcpp_fast_eval() into Rcpp::unwindProtect(). Use this function whenever you need to call a C function that might longjump, for instance a function from R's C API. Rcpp::unwindProtect() will protect your C++ stack and throw a Rcpp::internal::LongJump exception to ensure all destructors are called. The R longjump is then resumed once it is safe to do so. This function powers Rcpp_fast_eval(). You can use Rcpp::unwindProtect() in two ways. First with a C-like callback interface that takes a `SEXP (*)(void* data)` function pointer and a `void*` data argument that is passed to the function. Second, if you have C++11 enabled, Rcpp::unwindProtect() implements an `std::function` overload. You can pass any function object or lambda function with the right signature. * inst/include/Rcpp/api/meat/Rcpp_eval.h: Idem 2018-06-15 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem 2018-06-13 Filip Schouwenaars * inst/unitTests/runit.embeddedR.R: Evaluate in environment derived of baseenv 2018-06-11 Romain Francois * inst/include/Rcpp/exceptions.h: Control call and stack display after exception / stop * inst/unitTests/cpp/Exceptions_nocall.cpp: new test * inst/unitTests/runit.Exceptions_nocall.R: idem 2018-06-09 Qiang Kou * inst/include/Rcpp/DataFrame.h: Use Rcpp_fast_eval, not Rcpp_eval * inst/include/Rcpp/Environment.h: Idem * inst/include/Rcpp/Function.h: Idem * inst/include/Rcpp/Language.h: Idem * inst/include/Rcpp/Module.h: Idem * inst/include/Rcpp/Reference.h: Idem * inst/include/Rcpp/exceptions.h: Idem * inst/include/Rcpp/generated/Function__operator.h: Idem * inst/include/Rcpp/proxy/FieldProxy.h: Idem * inst/include/Rcpp/proxy/NamesProxy.h: Idem * inst/include/Rcpp/r_cast.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem * inst/examples/SugarPerformance/sugarBenchmarks.R: Idem * inst/unitTests/cpp/language.c: Idem * inst/unitTests/cpp/misc.c: Idem * src/barrier.c: Idem 2018-06-09 Dirk Eddelbuettel * inst/unitTests/runit.embeddedR.R: Suspend test for now 2018-06-08 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h: Idem * Contributing.md: Minor update coding style 2018-06-07 Kevin Ushey * inst/include/Rcpp/config.h: bump dev version 2018-06-06 Kevin Ushey * inst/include/Rcpp/RNGScope.h: Allow suspension of RNG synchronization * inst/include/Rcpp/routines.h: Idem * src/Rcpp_init.cpp: Idem * src/api.cpp: Idem * inst/include/Rcpp/api/meat/Rcpp_eval.h: Evaluate in base env 2018-06-05 Jack Wasey * inst/include/Rcpp/r_cast.h: Error and abort if debugging 2018-06-02 Lionel Henry * inst/unitTests/runit.interface.R: New test for the case where the client package was compiled without protected evaluation enabled. On R 3.5, longjump exceptions thrown from imported functions are still caught and dealt with properly by the client package. * inst/unitTests/runit.interface.R: Test both Rcpp_eval() and Rcpp_fast_eval(). 2018-06-01 Lionel Henry * inst/unitTests/runit.interface.R: New tests for interfaces and unwind. These tests build two packages, and that exports a function via Rcpp::interfaces(cpp) and the other that calls it. The attributes are regenerated and the packages rebuilt each time the tests are run. The tests check in particular that the C++ stack is properly unwound when a long jump occurs. 2018-06-01 Romain Francois * inst/include/Rcpp/Environment.h: Make Environment::new_child() const 2018-05-31 Lionel Henry * inst/include/Rcpp/api/meat/Rcpp_eval.h: Fix protected evaluation. Setting `RCPP_PROTECTED_EVAL` before including Rcpp.h enables a new R 3.5 API for safe evaluation of R code. R longjumps are now correctly intercepted and rethrown. Thanks to this the C++ stack is now safely unwound when a longjump is detected while calling into R code. This includes the following cases: thrown errors, caught condition of any class, long return, restart invokation, debugger exit. Note that this is still experimental! When `RCPP_PROTECTED_EVAL` is enabled, Rcpp_eval() uses the protect-unwind API under the hood in order to gain safety. It is fully backward-compatibile and still catches errors and interrupts to rethrow them as typed C++ exceptions. If you don't need to catch those, consider using Rcpp_fast_eval() instead to avoid the catching overhead. Rcpp_fast_eval() is a wrapper around Rf_eval(). Unlike Rcpp_eval(), it does not evaluate R code within tryCatch() and thus avoids the overhead of wrapping and evaluating the expression in a tryCatch() call. When Rcpp is compiled with a lower version than R 3.5, Rcpp_fast_eval() falls back to Rf_eval() without any protection from long jumps, even when `RCPP_PROTECTED_EVAL` is set. Either add R 3.5 to your `Depends` or make sure the legacy Rcpp_eval() function is called instead of Rcpp_fast_eval() when your package is compiled with an older version of R. Note that Rcpp_fast_eval() behaves a bit differently to Rcpp_eval(). The former has the semantics of the C function Rf_eval() whereas the latter behaves like the R function base::eval(). This has subtle implications for control flow. For instance evaluating a return() expression within a frame environment returns from that frame rather than from the Rcpp_eval() call. * inst/include/Rcpp/macros/macros.h: Leave the try/catch scope before resuming jump to ensure proper destruction of the exception reference. * inst/include/Rcpp/exceptions.h: Functions to create and check a longjump sentinel. This sentinel is used as return value in contexts where it is not safe to resume a jump (i.e. in the glue code of cpp interfaces). * inst/include/Rcpp/macros/macros.h: Return a longjump sentinel in END_RCPP_RETURN_ERROR. * src/attributes.cpp: Detect longjump sentinels and resume jump. 2018-05-27 Romain Francois * inst/include/Rcpp/vector/string_proxy.h: Make StringProxy::operator== const * inst/unitTests/cpp/Vector.cpp: New test * inst/unitTests/runit.Vector.R: Idem 2018-05-09 Filip Schouwenaars * R/Attributes.R: Set local environment in source() * inst/unitTests/cpp/embeddedR.cpp: New test * inst/unitTests/runit.embeddedR.R: Idem 2018-05-09 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.17 * inst/NEWS.Rd: Release 0.12.17 * inst/bib/Rcpp.bib: Release 0.12.17 * vignettes/Rcpp.bib: Release 0.12.17 * inst/include/Rcpp/config.h: Release 0.12.17 * debian/*: Changes for Debian release of 0.12.16 2018-05-05 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rmd: Also mention TAS paper * vignettes/Rcpp-introduction.Rmd: Idem * vignettes/Rcpp-jss-2011.Rnw: Idem 2018-05-04 Romain Francois * inst/include/Rcpp/String.h: Extend StoragePolicy support * inst/include/Rcpp/vector/00_forward_proxy.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem * inst/include/Rcpp/vector/const_generic_proxy.h: Idem * inst/include/Rcpp/vector/const_string_proxy.h: Idem * inst/include/Rcpp/vector/generic_proxy.h: Idem * inst/include/Rcpp/vector/proxy.h: Idem * inst/include/Rcpp/vector/string_proxy.h: Idem * inst/include/Rcpp/vector/traits.h: Idem * inst/unitTests/cpp/Vector.cpp: New test * inst/unitTests/runit.Vector.R: Idem 2018-04-25 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version 2018-04-25 Romain Francois * inst/include/Rcpp/Benchmark/Timer.h: If defined, undefine FALSE 2018-04-17 Ralf Stubner * vignettes/Rcpp-attributes.Rmd: Replace back-quote with straight quote * vignettes/Rcpp-modules.Rmd: Idem 2018-04-02 Dirk Eddelbuettel * .editorconfig: Added support for editorconfig.org * .clang_format: Removed * .dir-locals.el: Removed 2018-03-31 Dirk Eddelbuettel * inst/include/Rcpp/sprintf.h (Rcpp): Remove parens [gcc8 warning] * vignettes/Rcpp-attributes.Rmd: Update link to JSS intro vignette * vignettes/Rcpp-modules.Rmd: Idem 2018-03-21 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version 2018-03-18 Kevin Ushey * inst/include/Rcpp/stats/random/random.h: No inheritance from RNGScope 2018-03-14 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rmd: Correct a double-quote (thanks, Joris Meys) 2018-03-08 Peter Hickey * vignettes/Rcpp-attributes.Rmd: Correct stray backslash 2018-03-08 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.16 * inst/NEWS.Rd: Release 0.12.16 * inst/bib/Rcpp.bib: Release 0.12.16 * vignettes/Rcpp.bib: Release 0.12.16 * inst/include/Rcpp/config.h: Release 0.12.16 * debian/*: Changes for Debian release of 0.12.16 2018-02-07 Kevin Ushey * inst/include/Rcpp/longlong.h: Revised and more general logic for long long on 64bit Windows etc via C++11 and as int64_t alias where possible 2018-03-01 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/complex.h (Rcpp): Remove RCPP_HYPOT macro and use ::hypot() throught as it is provided with C99 * inst/include/Rcpp/sugar/undoRmath.h: Also uncomment pythag here 2018-02-28 Dirk Eddelbuettel * inst/include/Rcpp/Rmath.h (R): Rf_pythag has been remove in R 2.14.0 so comment-out the R::pythag wrapper (per request of Brian Ripley) 2018-02-26 Kevin Ushey * src/api.cpp: Always set / put RNG state when calling Rcpp function 2018-02-25 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated * inst/bib/Rcpp.bib: Idem * vignettes/Rcpp-FAQ.Rmd (Note): Expand conda answer by adding link 2018-02-14 Dirk Eddelbuettel * DESCRIPTION (Version, Date): New minor version 2018-02-14 Kirill Müller * R/Attributes.R: Code compiled with cppFunction() uses .Call instead of .Primitive(".Call"), #795 2018-02-07 Kevin Ushey * inst/include/Rcpp/longlong.h: Allow long long on 64bit Windows 2018-01-21 Dirk Eddelbuettel * README.md: Added new section 'Support' * vignettes/Rcpp-FAQ.Rmd (vignette): Uppercase index to 'Rcpp-FAQ'; removed reference to Gmane which sadly is no more 2018-01-19 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rmd (Note): Document the conda package `gxx_linux-64` as helpful in that environment 2018-01-16 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.15 * inst/NEWS.Rd: Release 0.12.15 * inst/bib/Rcpp.bib: Release 0.12.15 * vignettes/Rcpp.bib: Release 0.12.15 * inst/include/Rcpp/config.h: Release 0.12.15 * debian/*: Changes for Debian release of 0.12.15 2018-01-15 Dirk Eddelbuettel * inst/include/RcppCommon.h: Check for new #define RCPP_USE_UNWIND_PROTECT and unset if defined, this is being be used to "park" code from #789 * inst/include/Rcpp/Environment.h: Ifdef #789 via RCPP_USE_UNWIND_PROTECT * inst/include/Rcpp/Language.h: Idem * inst/include/Rcpp/api/meat/Rcpp_eval.h: Idem * inst/include/Rcpp/exceptions.h: Idem * inst/include/Rcpp/macros/macros.h: Idem * inst/unitTests/runit.stack.R: Ensure test is not running 2018-01-14 Dirk Eddelbuettel * DESCRIPTION (Version, Date): New minor version 0.12.14.8 * inst/include/Rcpp/traits/is_na.h (Rcpp): Also speed up Rcpp::is_na 2018-01-14 Lionel Henry * inst/unitTests/cpp/stack.cpp: Move stack unwinding tests from misc.cpp * inst/unitTests/runit.stack.R: Move stack unwinding tests from misc.R; disaggregate stack unwinding tests; also disable for now 2018-01-11 Kirill Müller * inst/include/Rcpp/traits/is_na.h: Speed up Rcpp::is_na() 2018-01-09 Iñaki Ucar * inst/include/Rcpp/vector/proxy.h: Improve support for NVCC, the CUDA compiler, by making three more methods const 2018-01-06 Kendon Bell * src/api.cpp: Allow for compilation on ANDROID 2017-12-21 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Updated minor version and date 2017-12-21 Kirill Müller * inst/include/Rcpp/internal/wrap.h: Appease gcc-7 with fall-through * inst/include/Rcpp/macros/unroll.h: Idem 2017-12-20 Kirill Müller * inst/include/Rcpp/utils/tinyformat.h: Update to new upstream c42f/tinyformat@8f60162, simplify future updates by separating Rcpp-specific changes (issue #786). 2017-12-19 Kevin Ushey * inst/include/Rcpp/internal/na.h: Remove 'clever' NA / NaN checks 2017-12-16 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Updated minor version and date 2017-12-13 Lionel Henry * inst/include/Rcpp/api/meat/Rcpp_eval.h: Add Rcpp_fast_eval() for safe and fast evaluation of R code using the new protect-unwind API in R 3.5. [ This is however disabled for release 0.12.15. ] * inst/include/Rcpp/exceptions.h: Add LongjumpException and resumeJump() to support Rcpp_fast_eval(). * inst/include/Rcpp/macros/macros.h: Catch LongjumpException and call resumeJump(). If resumeJump() doesn't jump (on old R versions), throw an R error (this normally should not happen). * inst/include/RcppCommon.h: Add Rcpp_fast_eval() to the public API and internal::Rcpp_eval_impl() to the private API. * inst/include/Rcpp/Environment.h: Use safe evaluation * inst/include/Rcpp/Language.h: idem 2017-12-05 Kevin Ushey * inst/include/Rcpp/Environment.h: Use public R APIs * inst/include/Rcpp/api/meat/Environment.h: Idem 2017-12-04 Kevin Ushey * inst/include/Rcpp/RObject.h: Protect temporary wrapped SEXPs * inst/include/Rcpp/api/meat/DataFrame.h: Idem * inst/include/Rcpp/api/meat/Environment.h: Idem * inst/include/Rcpp/api/meat/proxy.h: Idem * inst/include/Rcpp/proxy/ProtectedProxy.h: Idem * inst/include/Rcpp/vector/generic_proxy.h: Idem 2017-12-03 Dirk Eddelbuettel * DESCRIPTION (Version, Date): New minor version * inst/include/Rcpp/sugar/functions/is_na.h: Correct test for NA to work with new as well as old Date(time)Vectors * inst/unitTests/cpp/dates.cpp (has_na): Added tests * inst/unitTests/runit.Date.R (test.NA): Idem 2017-11-30 James J Balamuta * src/attributes.cpp: Fixed missing Rcpp namespace in export interface generation 2017-11-25 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/exceptions/cpp11/exceptions.h: Ensure Rf_format gets a format string * inst/include/Rcpp/exceptions/cpp98/exceptions.h (Rcpp): Ditto 2017-11-18 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * vignettes/Rcpp-FAQ.Rmd: Use Rcpp::Rcpp.plugin.maker(), not ':::' 2017-11-17 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.14 * inst/NEWS.Rd: Release 0.12.14 * inst/bib/Rcpp.bib: Release 0.12.14 * vignettes/Rcpp.bib: Release 0.12.14 * inst/include/Rcpp/config.h: Release 0.12.14 2017-11-04 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rmd: Add 'skip_final_break: true' toggle * vignettes/Rcpp-attributes.Rmd: Idem * vignettes/Rcpp-extending.Rmd: Idem * vignettes/Rcpp-modules.Rmd: Idem * vignettes/Rcpp-sugar.Rmd: Idem 2017-10-30 Dirk Eddelbuettel * inst/include/Rcpp.h: Unless RCPP_FORCE_OLD_DATE_DATETIME_VECTORS is defined, define RCPP_NEW_DATE_DATETIME_VECTORS to switch to new date and datetime vector as announced in release 0.12.8 one year ago 2017-10-03 Dirk Eddelbuettel * inst/include/Rcpp/iostream/Rstreambuf.h: White-space edits 2017-10-02 Kirill Müller * inst/include/Rcpp/iostream/Rstreambuf.h: Embed buffer class instance in Rostream to not require run-time allocation, and please Coverity 2017-09-29 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * DESCRIPTION (Description): Add per suggestion by CRAN * inst/CITATION: Add PeerJ article, add doi info, reindent 2017-09-26 Daniel C. Dillon * inst/include/Rcpp/vector/MatrixRow.h: Added cbegin() / cend() to MatrixRow, and fixing return types * inst/include/Rcpp/vector/VectorBase.h: Ditto 2017-09-24 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.13 * inst/NEWS.Rd: Release 0.12.13 * inst/bib/Rcpp.bib: Release 0.12.13 * inst/include/Rcpp/config.h: Release 0.12.13 2017-09-23 Dirk Eddelbuettel * inst/bib/Rcpp.bib: Updated references * viignettes/Rcpp.bib: Idem 2017-09-21 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * vignettes/Rcpp-FAQ.Rmd (Rcpp): Add entry for 'symbols not found' error requiring two runs of compileAttributes 2017-09-20 James J Balamuta * vignettes/rcpp-docs.cls: Removed 2017-09-20 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rmd: Modified formatting and cleaned a bit more. * vignettes/Rcpp-sugar.Rmd: Idem * vignettes/Rcpp-introduction.Rmd: Added new PeerJ preprint 2017-09-19 James J Balamuta * vignettes/Rcpp-FAQ.Rmd: Formatted and cleaned up vignette. * vignettes/Rcpp-sugar.Rmd: Idem 2017-09-19 Dirk Eddelbuettel * vignettes/Rcpp-attributes.Rmd: Formatted and cleaned up vignette. * vignettes/Rcpp-extending.Rmd: Idem * vignettes/Rcpp-modules.Rmd: Idem * vignettes/Rcpp-package.Rmd: Idem * vignettes/Rcpp-quickref.Rmd: Idem 2017-09-18 James J Balamuta * DESCRIPTION (Suggests): Added rmarkdown, knitr, and pinp dependencies * .travis.yml: idem * vignettes/Rcpp-quickref.Rmd: Translated vignette from highlight/sweave to RMarkdown for use with the pinp template. * vignettes/Rcpp-sugar.Rmd: Idem * vignettes/Rcpp-package.Rmd: Idem * vignettes/Rcpp-modules.Rmd: Idem * vignettes/Rcpp-FAQ.Rmd: Idem * vignettes/Rcpp-extending.Rmd: Idem * vignettes/Rcpp-attributes.Rmd: Idem 2017-09-18 Daniel C. Dillon * inst/include/Rcpp/vector/MatrixRow.h: Added cbegin() and cend() to the class along with a framework for proper const-correctness in the future. 2017-09-03 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version 2017-09-02 James J Balamuta * inst/include/Rcpp/vector/VectorBase.h: Defined both iterator AND const_iterator for future considerations. Currently, as before, only const_iterator is available (though it used to be called iterator). Added cbegin() and cend() functions. We should revisit whether there should be a non-const iterator on VectorBase in the future. * inst/include/Rcpp/vector/Matrix.h: Added cbegin() and cend() functions. Iterator defintions inherited from Vector are appropriate. * inst/include/Rcpp/vector/MatrixColumn.h: Added cbegin() and cend() functions. Iterator definitions inherited from Vector are appropriate because Matrix is column-major. * inst/include/Rcpp/vector/Vector.h: Added cbegin() and cend() functions. Iterators are appropriate minus the problem with the const proxy class of objects (which may or may not actually be const depending on which one). * inst/include/Rcpp/vector/traits.h: Removed (accidentally) some some trailing whitespace on lines. 2017-09-02 Dirk Eddelbuettel * DESCRIPTION (Version): Roll minor version * vignettes/Rcpp-jss-2011.Rnw: Renamed again from Rcpp-introduction-2011, added reference to new Rcpp-introduction * inst/bib/Rcpp.bib: Merged bibliography from new vignette; also added PeerJ Preprint with new Rcpp Introduction 2017-09-01 Dirk Eddelbuettel * vignettes/Rcpp-introduction.Rnw: New introductory vignette from PeerJ preprints but typeset 'more nicely' * vignettes/rcpp-docs.cls: New LaTeX style file derived from pnas-new and its supporting files * vignettes/figures/: Three support figures for new vignette * vignettes/intro2Rcpp.bib: New bibliography * vignettes/Rcpp-introduction-2011.Rnw: Renamed from from Rcpp-introduction 2017-08-26 Dirk Eddelbuettel * .travis.yml (before_install): Use https for curl fetch 2017-08-14 James J Balamuta * vignettes/Rcpp-FAQ.Rnw: Sunset macOS documentation dealing with toolchains by redirecting to the R Installation and Administration manual * vignettes/.gitignore: Added various LaTeX build artifacts to ignore. 2017-08-05 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version and date * inst/include/Rcpp/XPtr.h: Whitespace only-changes 2017-08-04 Lei Yu * inst/include/Rcpp/Module.h: Correct one closing parenthesis 2017-07-13 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.12 * inst/NEWS.Rd: Release 0.12.12 * inst/bib/Rcpp.bib: Release 0.12.12 * inst/include/Rcpp/config.h: Release 0.12.12 * README.md: Updated counts for dependents and tests * debian/*: Changes for Debian release of 0.12.12 2017-07-10 Jeff Pollock * inst/include/Rcpp/Module.h: Avoid unused variable warning * inst/include/Rcpp/Module_generated_Constructor.h: Ditto 2017-07-09 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Ditto * inst/NEWS.Rd: Added missing entries 2017-07-08 Kirill Müller * inst/include/Rcpp/vector/no_init.h: Accept R_xlen_t instead of int * inst/include/Rcpp/internal/wrap.h: Use R_xlen_t not int in loop unroll * inst/include/Rcpp/macros/unroll.h: Ditto * inst/include/Rcpp/vector/Vector.h: Ditto 2017-07-05 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Ditto 2017-07-02 JJ Allaire * src/attributes.cpp: Generate C++ native routines with underscore prefix to avoid export when standard exportPattern is used in NAMESPACE 2017-06-29 JJ Allaire * src/attributes.cpp: Replace dot (".") with underscore ("_") in package names when generating native routine registrations. 2017-06-27 Jeroen Ooms * inst/include/RcppCommon.h: Support attribute_visible macro 2017-06-17 Kirill Müller * inst/include/Rcpp/Dimension.h: Explicit cast to int * inst/include/Rcpp/exceptions.h: Don't declare unused arguments * src/attributes.cpp: Ditto 2017-06-14 JJ Allaire * src/attributes.cpp: Add Shield around parameters in Rcpp::interfaces 2017-06-07 Dirk Eddelbuettel * README.md: Use alternates for img.shields.io GPL-2+ badges 2017-06-06 Yu Gong * src/api.cpp: Also permit compilation under Haiku-OS 2017-06-04 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * man/Rcpp.plugin.maker.Rd: Update manual page to additional Imports argument 2017-06-02 JJ Allaire * src/attributes.cpp: Automatically register init functions for RcppModules * R/Rcpp.package.skeleton.R: compileAttributes only after all code is generated 2017-06-01 JJ Allaire * src/attributes.cpp: Fix registration for exports with name attribute. 2017-05-30 Dirk Eddelbuettel * inst/include/Rcpp/utils/tinyformat.h: Added missing newline 2017-05-23 JJ Allaire * R/Attributes.R: Execute tools::package_native_routine_registration_skeleton within package rather than current working directory. * src/attributes.cpp: Execute tools::package_native_routine_registration_skeleton within package rather than current working directory. 2017-05-22 Dirk Eddelbuettel * R/inline.R (Rcpp.plugin.maker): Whitespace changes 2017-05-20 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.11 * inst/NEWS.Rd: Release 0.12.11 * inst/bib/Rcpp.bib: Release 0.12.11 * inst/include/Rcpp/config.h: Release 0.12.11 * README.md: Updated counts for dependents and tests * debian/*: Changes for Debian release of 0.12.10 2017-05-19 Dirk Eddelbuettel * inst/NEWS.Rd: Removed one duplicate entry * inst/include/Rcpp/api/meat/Rcpp_eval.h (Rcpp): Minor whitespace changes 2017-05-18 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll Date and Version once more * inst/NEWS.Rd: Updated * R/Attributes.R (.plugins[["openmp"]]): Fix typo in comment * src/attributes.cpp (Rcpp): Use size_t (twice) to suppress nags from g++ 2017-05-16 JJ Allaire * R/Attributes.R: Automatically generate native routine registrations. * src/attributes.cpp: Automatically generate native routine registrations. * R/Rcpp.package.skeleton.R: Don't generate native routines when creating a package using attributes. 2017-05-09 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R (Rcpp.package.skeleton): Under R 3.4.0, run tools::package_native_routine_registration_skeleton to create src/init.c 2017-05-07 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version again * inst/include/Rcpp/module/Module_Property.h: Remove two typed exception specifications which upset g++ 7.1 or higher 2017-05-05 Kirill Müller * inst/include/Rcpp/date_datetime/Date.h: Suppress -Wconversion warnings * inst/include/Rcpp/date_datetime/Datetime.h: Idem * inst/include/Rcpp/date_datetime/newDateVector.h: Idem * inst/include/Rcpp/date_datetime/newDatetimeVector.h: Idem * inst/include/Rcpp/sugar/functions/rowSums.h: Idem * inst/include/Rcpp/sugar/functions/sample.h: Idem * inst/include/Rcpp/sugar/functions/strings/trimws.h: Idem 2017-04-26 Dirk Eddelbuettel * inst/include/Rcpp/exceptions.h (string_to_try_error): Protect result from Rf_mkString 2017-04-25 Dirk Eddelbuettel * R/Attributes.R (.plugins[["cpp11"]]): If R 3.4.0 or newer is used, set USE_CXX11 (instead of the older USE_CXX1X); (.plugins[["cpp14"]]): similarly updated for C++14 (.plugins[["cpp17"]]): similarly updated for C++17 (.plugins[["cpp98"]]): added 2017-04-22 Nathan Russell * inst/include/Rcpp/sugar/functions/strings/trimws.h: Added sugar function trimws with unit tests * inst/include/Rcpp/sugar/functions/strings/strings.h: Idem * inst/unitTests/cpp/sugar.cpp: Idem * inst/unitTests/runit.sugar.R: Idem 2017-04-20 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Idem * inst/include/Rcpp/exceptions/cpp98/exceptions.h (RCPP_ADVANCED_EXCEPTION_CLASS): Suppressing some warnings 2017-04-20 James J Balamuta * inst/include/Rcpp/api/meat/DottedPairImpl.h: Corrected format specifier from '%s' to '%i'. 2017-04-18 James J Balamuta * inst/include/Rcpp/vector/Matrix.h: Corrected exception throws from not_compatible to not_a_matrix. * inst/include/Rcpp/S4.h: Fixed documentation detailing exception class throw. * inst/include/Rcpp/Environment.h: Improved error handling messages * inst/include/Rcpp/Function.h: idem * inst/include/Rcpp/Promise.h: idem * inst/include/Rcpp/String.h: idem * inst/include/Rcpp/Symbol.h: idem * inst/include/Rcpp/XPtr.h: idem * inst/include/Rcpp/as.h: idem * inst/include/Rcpp/r_cast.h: idem * inst/include/Rcpp/api/meat/DottedPairImpl.h: idem * inst/include/Rcpp/internal/export.h: idem * inst/include/Rcpp/proxy/DottedPairProxy.h: idem * inst/include/Rcpp/proxy/SlotProxy.h: idem * inst/include/Rcpp/vector/MatrixColumn.h: idem * inst/include/Rcpp/vector/MatrixRow.h: idem * inst/include/Rcpp/vector/Vector.h: idem 2017-04-17 James J Balamuta * inst/include/Rcpp/Rcpp/exceptions/cpp11/exceptions.h: Removed semicolons from RCPP_ADVANCED_EXCEPTION_CLASS to quiet 'extra ;' -Wpedantic * inst/include/Rcpp/exceptions.h: Modified exceptions macros to support a default string and removed generated stop, warning from file. * inst/include/Rcpp/Rcpp/exceptions/cpp98/exceptions.h: Contains generated RCPP_ADVANCED_EXCEPTION_CLASS macro, stop & warning. * inst/include/Rcpp/Rcpp/exceptions/cpp11/exceptions.h: idem but for variadic versions. * inst/include/Rcpp/utils/tinyformat.h: Enabled ability to use variadic tinyformat function if c++11 is detected. 2017-04-14 James J Balamuta * inst/include/Rcpp/utils/tinyformat.h: Refreshed tinyformat.h against May 13, 2016 upstream, retained local mods. 2017-04-14 Kirill Müller * inst/include/Rcpp/macros/macros.h: Remove unused variable warning in BEGIN_RCPP macro * inst/include/Rcpp/DataFrame.h: Explicitly call parent constructor * inst/include/Rcpp/sugar/functions/rep.h: Remove variable name in function declaration to suppress unused argument warning * src/Rcpp_init.cpp: Ditto * src/attributes.cpp: Ditto 2017-04-11 Dirk Eddelbuettel * inst/inst/unitTests/testRcppClass/src/init.c (R_init_testRcppClass): Call R_registerRoutines() and R_useDynamicSymbols(); also ensure _rcpp_module_boot_* is registered for each module * inst/unitTests/testRcppClass/NAMESPACE: Added registration * inst/unitTests/testRcppClass/DESCRIPTION (Title): Title case * inst/unitTests/testRcppClass/R/rcpp_hello_world.R (rcpp_hello_world): Call the renamed C++ function * inst/unitTests/testRcppClass/src/rcpp_hello_world.cpp (rcpp_hello_world_cpp): Renamed C++ function to be distinct from R function calling it * inst/unitTests/testRcppClass/src/rcpp_hello_world.h: Ditto * inst/unitTests/testRcppClass/man/rcpp_hello_world.Rd: Alias renamed C++ function 2017-04-09 Dirk Eddelbuettel * inst/unitTests/testRcppModule/src/init.c (R_init_testRcppModule): Call R_registerRoutines() and R_useDynamicSymbols(); also ensure _rcpp_module_boot_* is registered for each module * inst/unitTests/testRcppModule/NAMESPACE: Added registration * inst/unitTests/testRcppModule/DESCRIPTION (Title): Title case * inst/unitTests/testRcppModule/R/rcpp_hello_world.R (rcpp_hello_world): Call the renamed C++ function * inst/unitTests/testRcppModule/src/rcpp_hello_world.cpp (rcpp_hello_world_cpp): Renamed C++ function to be distinct from R function calling it * inst/unitTests/testRcppModule/src/rcpp_hello_world.h: Ditto * inst/unitTests/testRcppModule/man/rcpp_hello_world.Rd: Alias renamed C++ function * inst/unitTests/testRcppModule/man/Rcpp_modules_examples.Rd: Alias renamed modules * inst/unitTests/testRcppModule/tests/modules.R: Call renamed module 2017-04-03 Jim Hester * inst/include/Rcpp/exceptions.h: Added support for throwing exceptions without call stacks. * inst/include/Rcpp/macros/macros.h: Idem * inst/unitTests/cpp/exceptions.cpp: Idem * inst/unitTests/runit.exceptions.R: Idem 2017-03-28 James J Balamuta * inst/vignettes/Rcpp-FAQ.Rnw: Added "Known Issues" section to FAQ 2017-03-25 Dirk Eddelbuettel * LICENSE: Added * .Rbuildignore: Do not include LICENSE in package 2017-03-17 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.10 * inst/NEWS.Rd: Release 0.12.10 * inst/bib/Rcpp.bib: Release 0.12.10 * inst/include/Rcpp/config.h: Release 0.12.10 * README.md: Updated counts for dependents and tests * debian/*: Changes for Debian release of 0.12.10 2017-03-15 Jeroen Ooms * inst/include/Rcpp/XPtr.h: added finalizeOnExit parameter 2017-02-28 Dirk Eddelbuettel * src/Rcpp_init.cpp (R_init_Rcpp): Call R_useDynamicSymbols() * DESCRIPTION (Version, Date): New minor version 2017-02-25 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: New subsection on C++11, C++14, C++17 2017-02-17 Dirk Eddelbuettel * R/tools.R: More #nocov * inst/include/Rcpp/internal/r_vector.h: Idem 2017-02-15 Dirk Eddelbuettel * DESCRIPTION (Version, Date): New minor version 2017-02-14 Iñaki Ucar * inst/include/Rcpp/iostream/Rstreambuf.h: Fixed single-character handling (pull request #649, fixes issue #647) 2017-02-13 Dirk Eddelbuettel * R/Attributes.R (.plugins[["cpp17"]]): New plugin (.plugins[["cpp1z"]]): Idem 2017-02-04 Daniel C. Dillon * inst/include/Rcpp/algorithm.h: Improved setup for Intel's icc 2017-01-31 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Roll minor version * inst/include/Rcpp/algorithm.h: Allow algorithm.h to be compiler under Intel's compiler, add copyright header and include guard 2017-01-31 Nathan Russell * inst/include/Rcpp/sugar/matrix/upper_tri.h: Inherit from MatrixBase and use correct comparators in get() to fix segfault * inst/include/Rcpp/sugar/matrix/lower_tri.h: Idem * inst/unitTests/cpp/sugar.cpp: Added unit tests for upper_tri and lower_tri * inst/unitTests/runit.sugar.R: Idem 2017-01-23 James J Balamuta * inst/include/Rcpp/DataFrame.h: Corrected return type for column size. 2017-01-22 Dirk Eddelbuettel * inst/include/Rcpp/DataFrame.h: Simplified and removed deprecation language. 2017-01-21 James J Balamuta * inst/include/Rcpp/DataFrame.h: Added alias for column and row size * inst/unitTests/runit.DataFrame.R: Added unit tests for aliases * inst/unitTests/cpp/DataFrame.cpp: Idem 2017-01-17 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version and Date * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Roll minor * src/Date.cpp (Rcpp): Do not access tm_gmtoff on Solaris 2017-01-14 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.9 * inst/NEWS.Rd: Release 0.12.9 * inst/bib/Rcpp.bib: Release 0.12.9 * inst/include/Rcpp/config.h: Release 0.12.9 * README.md: Updated counts for dependents and tests * debian/*: Changes for Debian release of 0.12.9 2017-01-13 Dirk Eddelbuettel * inst/include/Rcpp/exceptions.h: Added more #nocov tags * inst/include/Rcpp/api/bones/wrap_extra_steps.h: Idem * inst/include/Rcpp/iostream/Rstreambuf.h: Idem * inst/include/Rcpp/traits/named_object.h: Idem * inst/include/Rcpp/r_cast.h: Idem * src/Module.cpp: Idem 2017-01-12 Dirk Eddelbuettel * inst/bib/Rcpp.bib: Moved from vignettes/ directory * R/bib.R (bib): Idem * vignettes/Rcpp-FAQ.Rnw: Evaluate \Sexpr{Rcpp:::bib()} * vignettes/Rcpp-attributes.Rnw: Idem * vignettes/Rcpp-extending.Rnw: Idem * vignettes/Rcpp-introduction.Rnw: Idem * vignettes/Rcpp-modules.Rnw: Idem * vignettes/Rcpp-packages.Rnw: Idem * vignettes/Rcpp-sugar.Rnw: Idem * inst/unitTests/runit.misc.R (test.bib): New test * R/exceptions.R: Added #nocov 2017-01-11 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated references * src/attributes.cpp (Rcpp): Correct typos in #nocov tags, added tags 2017-01-07 James J Balamuta * inst/include/Rcpp/sugar/functions/complex.h: Added Arg() function * inst/unitTests/runit.sugar.R: Added Arg() unit test to complex list * inst/unitTests/cpp/sugar.cpp: Idem 2017-01-06 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Mark new minor version * src/attributes.cpp: Additional nocov tags 2017-01-04 Dirk Eddelbuettel * src/Date.cpp (Rcpp): Protect assignment to tm_gmtoff to not being under MinGW; could potentially bite other too-limited systems * inst/unitTests/runit.Date.R (test.Datetime.formating): Do not set TZ when running test, only set digits option 2017-01-01 Dirk Eddelbuettel * inst/unitTests/runit.Date.R (test.mktime, test.gmtime): New tests * inst/unitTests/cpp/dates.cpp (test_mktime, test_gmtime): Idem 2016-12-31 Dirk Eddelbuettel * inst/include/Rcpp/vector/Matrix.h: Minor simplification 2016-12-31 James J Balamuta * inst/include/Rcpp/vector/Matrix.h: Fixed non-symmetric case of matrix fills by switching to a loop based solution from iterator. * inst/unitTests/runit.Matrix.R: Added unit tests for diagonally filling matrices. * inst/unitTests/cpp/Matrix.cpp: Idem 2016-12-30 Dirk Eddelbuettel * src/Date.cpp: Synchronized internal code with R * inst/unitTests/cpp/dates.cpp (gmtime_mktime): New test * inst/unitTests/runit.Date.R (test.mktime_gmtime): Idem 2016-12-26 Dirk Eddelbuettel * R/Attributes.R: Added #nocov markers * R/Module.R: Idem * R/exposeClass.R: Idem, added copyright header 2016-12-25 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Roll minor version * src/api.cpp: Added #nocov markers * src/Rcpp_init.cpp: Idem * src/Date.cpp: Date 2016-12-14 Nathan Russell * inst/include/Rcpp/sugar/functions/sample.h: Use vector instead of manual memory management. 2016-12-13 Nathan Russell * inst/include/Rcpp/sugar/functions/sample.h: Use malloc.h instead of alloca.h when building on Windows * inst/include/Rcpp/date_datetime/Date.h: Include time.h when building on Windows * inst/include/Rcpp/date_datetime/Datetime.h: Idem 2016-12-12 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/sample.h: In case sample.h from the RcppArmadillo extensions was included, skip this file 2016-12-10 Nathan Russell * inst/include/Rcpp/sugar/functions/sample.h: New function sample() * inst/include/Rcpp/sugar/functions/functions.h: Idem * inst/unitTests/cpp/sugar.cpp: Unit tests for sample() * inst/unitTests/runit.sugar.R: Idem 2016-12-10 Dirk Eddelbuettel * R/loadRcppModules.R: Added #nocov tags * R/loadModule.R: Ditto * R/unit.tests.R (test): Adjusted one #nocov tag 2016-12-09 Dirk Eddelbuettel * R/00_classes.R: Added #nocov tags * R/01_show.R: Ditto * R/02_completion.R: Ditto * R/03_prompt.R: Ditto 2016-12-07 Dirk Eddelbuettel * inst/include/Rcpp/vector/Matrix.h: Add 'using ...' to disambiguate size() 2016-12-04 Dirk Eddelbuettel * .codecov.yml (comment): Enable more verbose codecov.io reports 2016-12-03 Dirk Eddelbuettel * inst/unitTests/cpp/dates.cpp (Datetime_format): Additional ostream tests * inst/unitTests/runit.Date.R (test.Date.formating): Ditto * inst/unitTests/runit.system.R (test.RcppCxx): New tests * R/RcppLdpath.R (canUseCXX0X): Simplified as we can now rely on more modern compilers; underlying C++ code has not been present for a while * R/compilerCheck.R (compilerCheck): Added some #nocov tags * R/unit.tests.R (test, gctortureRUnitTest): Ditto * R/zzz.R (.onLoad): Ditto 2016-11-29 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll minor version to 0.12.8.2 2016-11-28 Dirk Eddelbuettel * inst/unitTests/cpp/dates.cpp (Date_format, Datetime_format): New tests * inst/unitTests/runit.Date.R (test.Date.formating): Ditto (test.Datetime.formating): Ditto * inst/unitTests/runit.sugar.R (test.intersect): Added sort() around call to Sugar's intersect to ensure sorted output with g++-6.* 2016-11-27 Dirk Eddelbuettel * inst/include/Rcpp/date_datetime/Date.h (format, operator<<): Added * inst/include/Rcpp/date_datetime/Datetime.h (format, operator<<): Ditto * inst/include/Rcpp/date_datetime/newDateVector.h (operator<<): Ditto * inst/include/Rcpp/date_datetime/newDatetimeVector.h (operator<<): Ditto 2016-11-23 Dirk Eddelbuettel * inst/include/Rcpp/config.h (RCPP_DEV_VERSION): Set minor version 2016-11-22 Dirk Eddelbuettel * DESCRIPTION (Date, Version): Roll minor version * inst/include/Rcpp/date_datetime/newDatetimeVector.h (Rcpp): Small correction concerning timezone attribute to ctor from RTYPE 2016-11-22 Jim Hester * inst/src/api.cpp: Cleanup to stack message parseing * inst/unitTests/cpp/exceptions.cpp: Unit tests for cleanup * inst/unitTests/runit.exceptions.R: Ditto 2016-11-19 James J Balamuta * inst/unitTests/runit.environments.R: Added environment find unit tests as well as a symbol access test for environment get. * inst/unitTests/cpp/Environment.cpp: Idem 2016-11-18 James J Balamuta * vignettes/Rcpp-extending: Switched to attributes and added external class pointer macro notes by MathurinD 2016-11-16 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.8 * inst/NEWS.Rd: Release 0.12.8 * vignettes/Rcpp.bib: Release 0.12.8 * inst/include/Rcpp/config.h: Release 0.12.8 * README.md: Updated counts for dependents and tests * debian/*: Changes for Debian release of 0.12.8 2016-11-15 Dirk Eddelbuettel * DESCRIPTION: Nathan Russell added to Authors 2016-11-14 Jim Hester * inst/include/Rcpp/exceptions.h: Improved exception call stack * inst/include/Rcpp/routines.h: Ditto * inst/src/api.cpp: Ditto * R/exections.R: Print and format method for stack straces * inst/unitTests/runit.exceptions.R: Unit tests * inst/unitTests/cpp/exceptions.cpp: Ditto 2016-11-13 Dirk Eddelbuettel * R/Attributes.R (mergeIntoBuildEnv): Correct 'empty' return 2016-11-10 Dirk Eddelbuettel * inst/include/Rcpp/date_datetime/newDateVector.h: Added constructor using VectorBase<> 2016-11-05 Daniel C. Dillon * inst/include/Rcpp/date_datetime/newDatetimeVector.h: Added constructor to instantiate newDatetimeVector from VectorBase. 2016-11-04 Nathan Russell * inst/include/Rcpp/macros/dispatch.h: Modify variadic macros to not use GNU extensions * DESCRIPTION: roll minor version 2016-11-03 Nathan Russell * inst/include/Rcpp/hash/IndexHash.h: Add casts to eliminate signed / unsigned comparison warning * inst/include/Rcpp/hash/SelfHash.h: Idem * inst/unitTests/cpp/sugar.cpp: Added unit tests for sugar function unique() * inst/unitTests/runit.sugar.R: Idem 2016-10-30 Dirk Eddelbuettel * src/api.cpp: New capabilities field for new date(time) vectors * inst/unitTests/runit.Date.R (test.DatetimeVector.ctor): Differentiate in test as case of 'Inf' is handling differently by new and old datetime classes (and passed through as is by new ones which is better) * inst/unitTests/runit.InternalFunctionCPP11.R: Small cosmetic edit 2016-10-24 Qiang Kou * inst/include/Rcpp/sugar/Range.h : fix range sugar ambiguity * inst/unitTests/cpp/sugar.cpp: range sugar unit test * inst/unitTests/runit.sugar.R: range sugar unit test 2016-10-24 Nathan Russell * inst/include/Rcpp/vector/MatrixBase.h: Change sugar functions eye(), ones(), and zeros() into static methods in MatrixBase * inst/include/Rcpp/traits/one_type.h: Idem * inst/include/Rcpp/traits/traits.h: Idem * inst/unitTests/cpp/Matrix.cpp: Idem * inst/unitTests/runit.Matrix.R: Idem 2016-10-24 Qiang Kou * inst/include/Rcpp/sugar/Range.h: Range sugar uses R_xlen_t as start/end type 2016-10-23 Nathan Russell * inst/include/Rcpp/sugar/matrix/eye.h: New functions eye(), ones(), and zeros() * inst/include/Rcpp/sugar/matrix/matrix_functions.h: Idem * inst/unitTests/cpp/sugar.cpp: Unit tests for new functions * inst/unitTests/runit.sugar.R: Idem * inst/unitTests/runit.dispatch.R (test.ExpressionVector): Use expression rather than parse, correct typo 2016-10-22 Qiang Kou * inst/include/Rcpp/hash/IndexHash.h: change hashing function to return unsigned int * inst/include/Rcpp/hash/SelfHash.h: Ditto 2016-10-21 Qiang Kou * inst/include/Rcpp/barrier.h: Change string_elt/vector_elt to accept R_xlen_t * inst/include/Rcpp/routines.h: Ditto * src/barrier.cpp: Ditto 2016-10-19 Dirk Eddelbuettel * inst/include/Rcpp/date_datetime/Datetime.h (Rcpp): Additional operator+ for int argument 2016-10-18 Dirk Eddelbuettel * inst/include/Rcpp/date_datetime/Date.h (Rcpp): Add operator double() * inst/include/Rcpp/date_datetime/Datetime.h (Rcpp): Ditto 2016-10-17 Dirk Eddelbuettel * inst/include/Rcpp/date_datetime/newDatetimeVector.h (Rcpp): Allow setting of timezone attribute; default not-set leads to local as in R 2016-10-16 Dirk Eddelbuettel * inst/include/Rcpp.h (RCPP_NEW_DATE_DATETIME_VECTORS): Add a new compile-time #define to switch between 'old' (existing) and 'new' DateVector and DatimeVector classes. Currently uses 'new' for testing plan to switch to proper deprecation schedule. * inst/include/Rcpp/date_datetime/date_datetime.h: New header file (and directory) regrouping all Date and Datetime headers, scalar and vector * inst/include/Rcpp/date_datetime/Date.h: Moved one directory down * inst/include/Rcpp/date_datetime/Datetime.h: Ditto * inst/include/Rcpp/date_datetime/oldDateVector.h: Moved and renamed * inst/include/Rcpp/date_datetime/oldDatetimeVector.h: Ditto * inst/include/Rcpp/date_datetime/newDateVector.h: New implementation inheriting from NumericVector, still optional * inst/include/Rcpp/date_datetime/newDatetimeVector.h: Ditto 2016-09-05 Dirk Eddelbuettel * DESCRIPTION (Version): Roll minor version * cleanup: Clean two more file type from vignettes/ 2016-09-04 Nathan Russell * inst/include/Rcpp/sugar/functions/rowSums.h: New functions rowSums(), colSums(), rowMeans(), and colMeans() * inst/include/Rcpp/sugar/functions/functions.h: Idem * inst/unitTests/cpp/sugar.cpp: Unit tests for new functions * inst/unitTests/runit.sugar.R: Idem 2016-09-04 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.7 * inst/NEWS.Rd: Release 0.12.7 * vignettes/Rcpp.bib: Release 0.12.7 * inst/include/Rcpp/config.h: Release 0.12.7 * README.md: Updated counts for dependents and tests * debian/*: Changes for Debian release of 0.12.7 2016-09-02 Simon Dirmeier * src/attributes.cpp: Remove leading underscore in header guard 2016-08-14 James J Balamuta * inst/examples/FastLM/lmGSL.R: Updated example to use new GSL templates 2016-08-11 Dirk Eddelbuettel * .travis.yml: Switch to using run.sh for Travis CI 2016-08-09 Artem Klevtsov * inst/include/Rcpp/macros/dispatch.h: Add variadic conditional macro when C++11 compiler used * ints/include/unitTests/cpp/dispatch.cpp: Add unit tests for RCPP_RETURN_VECTOR and RCPP_RETURN_MATRIX macro * ints/include/unitTests/runit.dispatch.R: Idem 2016-08-05 James J Balamuta * inst/examples/FastLM/fastLMviaArmadillo.r: format fix * inst/examples/FastLM/lmGSL.R: Updated example to use Rcpp attributes instead of cxxfunction * inst/examples/FastLM/lmArmadillo.R: Idem * inst/examples/functionCallback/newApiExample.r: Idem * inst/examples/RcppInline/RcppInlineExample.r: Idem * inst/examples/RcppInline/RcppInlineWithLibsExamples.r: Idem * inst/examples/RcppInline/UncaughtExceptions.r: Idem * inst/examples/RcppInline/external_pointer.r: Idem 2016-08-04 James J Balamuta * src/attributes.cpp: Correct variable re-declaration * inst/examples/RcppGibbs/RcppGibbs.R: Updated example to use Rcpp attributes instead of cxxfunction * inst/examples/RcppGibbs/timeRNGs.R: Idem 2016-08-03 Dirk Eddelbuettel * .gitattributes: Added to have ChangeLog and NEWS.Rd merge via union 2016-08-02 James J Balamuta * R/Rcpp.package.skeleton.R: Added autogeneration warning * src/attributes.cpp: Fixed invalid C++ Identifiers and modified export header to warn against hand edits * vignettes/Rcpp-package.Rnw: Updated code generation snippets * man/Rcpp.package.skeleton.Rd: Add warning on hand edits to the autogenerated RcppExports files. * man/compileAttributes.Rd: Idem 2016-08-02 Qiang Kou * inst/include/Rcpp/String.h: CE_UTF8 as default encoding * inst/unitTests/cpp/String.cpp: Update unit test * inst/unitTests/runit.String.R: Idem 2016-08-01 Nathan Russell * inst/include/Rcpp/vector/Vector.h: Added decreasing option for Vector sort * inst/include/Rcpp/internal/NAComparator.h: Idem * inst/unitTests/cpp/Vector.cpp: Idem * inst/unitTests/runit.Vector.R: Idem 2016-07-31 Qiang Kou * inst/examples/SugarPerformance/sugarBenchmarks.R: Remove usage of Rf_eval * inst/include/Rcpp/Environment.h: Idem * inst/include/Rcpp/Module.h: Idem * inst/include/Rcpp/exceptions.h: Idem * inst/include/Rcpp/proxy/FieldProxy.h: Idem * inst/include/Rcpp/r_cast.h: Idem * inst/unitTests/cpp/language.cpp: Idem * src/barrier.cpp: Idem 2016-07-24 Dirk Eddelbuettel * inst/unitTests/cpp/rmath.cpp: Added RNG unit tests for sugar variants * inst/unitTests/runit.rmath.R: Idem 2016-07-22 James J Balamuta * inst/unitTests/cpp/rmath.cpp: Added unit tests for Rmath RNGs * inst/unitTests/runit.rmath.R: idem * inst/include/Rcpp/Environment.h: Added get() & find() that accept a symbol * inst/include/Rcpp.h: Modified header load order so that Symbol.h is now placed before Environment.h 2016-07-21 Dirk Eddelbuettel * DESCRIPTION (Version): Roll minor release 2016-07-18 Kevin Ushey * inst/include/Rcpp/r/headers.h: Ensure NORET macro is set appropriately 2016-07-18 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.6 * inst/NEWS.Rd: Release 0.12.6 * vignettes/Rcpp.bib: Release 0.12.6, RProtoBuf updates * inst/include/Rcpp/config.h: Release 0.12.6 * README.md: Updated counts for dependents and tests * debian/*: Changes for Debian release of 0.12.5 2016-07-17 James J Balamuta * vignettes/Rcpp-quickref.Rnw: Added sections on Rcpp attributes and plugins. Facelifts on important notes, inline, environments, and calling R functions. 2016-07-16 Daniel C. Dillon * Added a const_interator typedef to VectorBase 2016-07-15 James J Balamuta * vignettes/Rcpp-FAQ.Rnw: Added section on default function parameters 2016-07-15 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Also point to Rcpp-attributes in Question 1 2016-07-13 Dirk Eddelbuettel * NAMESPACE: Add import for glob2rx to please R CMD check * man/cppFunction.Rd: line break below 90 columns to please R CMD check 2016-07-11 J.J. Allaire * R/Attributes.R Add cacheDir argument to sourceCpp to enable caching of shared libraries across R sessions * src/attributes.cpp Add cacheDir argument to sourceCpp to enable caching of shared libraries across R sessions * man/sourceCpp.Rd: Document new cacheDir option * man/cppFunction.Rd: Idem * man/evalFunction.Rd: Idem 2016-07-10 Nathan Russell * inst/include/Rcpp/algorithm.h: Accomodate clang compiler 2016-07-03 Dirk Eddelbuettel * DESCRIPTION (Version): Rolling minor version 2016-07-02 Qiang Kou * src/attributes.cpp: Replace '.' in package names 2016-06-23 Dirk Eddelbuettel * DESCRIPTION (Version): Rolling minor version * inst/include/Rcpp/exceptions.h (Rcpp): Also expose Rf_warningcall() within Rcpp namespace (without leading Rf_) 2016-06-20 Qin Wenfeng * inst/include/Rcpp/exceptions.h: add RCPP_USING_UTF8_ERROR_STRING macro to use UTF-8 encoding exception string in R 2016-06-14 Artem Klevtsov * inst/include/Rcpp/sugar/functions/na_omit.h: Improve na_omit for vectors without NA * inst/unitTests/cpp/sugar.cpp: Add unit test for the na_omit * inst/unitTests/runit.sugar.R: Ditto 2016-06-02 Kirill Müller * inst/include/Rcpp/algorithm.h: Use "long long" only if available * inst/include/Rcpp/exceptions.h: Annotate stop() with NORET 2016-05-18 Daniel C. Dillon * inst/include/Rcpp/algorithm.h: New approach for sugar * inst/unitTests/cpp/algorithm.cpp: Unit test support * inst/unitTests/runit.algorithm.R: Ditto 2016-05-17 Dirk Eddelbuettel * DESCRIPTION (Version): Rolling minor version 2016-05-16 Qiang Kou * inst/include/Rcpp/String.h: Correct string replacement * inst/unitTests/runit.String.R: Unit test 2016-05-16 Daniel C. Dillon * inst/include/Rcpp/sugar/functions/max.h: Fixing constness * inst/include/Rcpp/sugar/functions/min.h: Ditto 2016-05-15 Daniel C. Dillon * inst/include/Rcpp/vector/Matrix.h: Correcting ambiguities in Vector/Matrix and scalar operations * inst/include/Rcpp/sugar/operators/divides.h: Ditto * inst/include/Rcpp/sugar/operators/minus.h: Ditto * inst/include/Rcpp/sugar/operators/plus.h: Ditto * inst/include/Rcpp/sugar/operators/times.h: Ditto 2016-05-14 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.5 * inst/NEWS.Rd: Release 0.12.5 * vignettes/Rcpp.bib: Release 0.12.5 * inst/include/Rcpp/config.h: Release 0.12.5 * debian/*: Changes for Debian release of 0.12.5 * vignettes/Rcpp.bib: Updated references 2016-05-13 Dirk Eddelbuettel * DESCRIPTION: Rolled minor version * R/compilerCheck.R: Minimal R function to check g++ version sufficiency * man/compilerCheck.Rd: Documentation 2016-05-11 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R: Modified to create a package without notes, warnings, or error even pkgKitten is not available * R/Rcpp.package.skeleton.R (.playWithPerPackageHelpPage): Added new helper function to be used when pkgKitten is not available * inst/skeleton/manual-page-stub.Rd: Stub for per-package help page used when pkgKitten is not available 2016-05-10 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R: Also correct Title: and Description: to satisfy R CMD check in R-release and (current) R-devel 2016-05-08 Dirk Eddelbuettel * inst/unitTests/cpp/Matrix.cpp: Made four scalar/matrix tests less ambiguous for overloads by using double as scalar 2016-05-06 Dirk Eddelbuettel * R/loadRcppModules.R (loadRcppModules): Add call to .Deprecated pointing out that loadModule is preferred * man/Rcpp-deprecated.Rd: Added to list deprecated functions * man/loadRcppModules-deprecated.Rd: Renamed to -deprecated, added link to loadModule which is the preferred method * vignettes/Rcpp-modules.Rnw: Updated with respect to loadRcppModules deprecation and loadModule being preferred 2016-04-15 Kevin Ushey * src/attributes.cpp: Add a missing 'winslash = "/"' 2016-04-14 J.J. Allaire * src/attributes.cpp: Correct handling of dependent file paths on Windows (use winslash = "/") 2016-04-13 Dirk Eddelbuettel * DESCRIPTION (Version): Rolling minor version and Date 2016-04-11 Ben Goodrich * R/Module.R: Avoid calling as.character() on C++Object to prevent race 2016-04-02 Dirk Eddelbuettel * DESCRIPTION: Rolled to minor version 0.12.4.3 * inst/include/Rcpp/config.h: Ditto * ChangeLog: Added entries for PRs 453 and 454 * inst/NEWS.Rd: Add two missing \item uses * R/Module.R: Rename copy to copyObject to avoid function name collisions * inst/unitTests/runit.Module.R: Ditto * man/copyObject.Rd: Ditto * inst/NEWS.Rd: Ditto * NAMESPACE: Ditto * inst/unitTests/runit.environments.R: Skip test.environment.child test 2016-03-31 Romain Francois * R/Modules.R: New top-level functions copy, destruct and is_destructed * NAMESPACE: New functions copy, destruct and is_destructed exported * man/copy.Rd: New manual page * man/destruct.Rd: Ditto * inst/include/Rcpp/module/class.h: Add copy constructortor + destructor * inst/include/Rcpp/module/class_Base.h: Ditto * src/Module.cpp: Ditto * src/Rcpp_init.cpp: Ditto * src/internal.h: Ditto * inst/include/Rcpp/traits/traits.h: New trait detecting copy contructor * inst/include/Rcpp/traits/has_copy_constructor.h: Ditto * inst/unitTests/runit.Module.R: Test new copy constructor and destructor * inst/unitTests/cpp/Module.cpp: Ditto 2016-03-29 Daniel C. Dillon * inst/include/Rcpp/String.h: Correct Rcpp::String for Rcpp::Nullable 2016-03-27 Qin Wenfeng * R/Attributes.R: Support new R 3.3.0 Windows toolchain 2016-03-26 Dirk Eddelbuettel * DESCRIPTION: Rolled Date and minor Version 2016-03-23 Sergio Marques * src/api.cpp: Also check a flag __MUSL__ to accomodate Alpine 2016-03-22 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.4 * inst/NEWS.Rd: Release 0.12.4 * vignettes/Rcpp.bib: Release 0.12.4 * inst/include/Rcpp/config.h: Release 0.12.4 * debian/*: Changes for Debian release of 0.12.4 2016-03-19 Dirk Eddelbuettel * README.md: Use canonical CRAN URL to please R-devel CMD check 2016-03-12 Nathan Russell * inst/include/Rcpp/sugar/functions/cbind.h: Undefine MakeBindable macro after use 2016-03-12 Nathan Russell * inst/include/Rcpp/sugar/functions/cbind.h: New cbind() function * inst/include/Rcpp/sugar/functions/functions.h: Idem * inst/unitTests/cpp/sugar.cpp: Unit tests for cbind() * inst/unitTests/runit.sugar.R: Idem 2016-03-09 Colin Gillespie * vignettes/Rcpp-sugar.Rnw: Correct typos and indentation 2016-03-09 Dirk Eddelbuettel * inst/include/Rcpp/stats/random/rlogis.h: Updated Emacs header and copyright, aligned indentation * inst/include/Rcpp/stats/random/rnbinom.h: Idem * inst/include/Rcpp/stats/random/rnbinom_mu.h: Idem * inst/include/Rcpp/stats/random/rnchisq.h: Idem * inst/include/Rcpp/stats/random/rnorm.h: Idem * inst/include/Rcpp/stats/random/rt.h: Idem * inst/include/Rcpp/stats/random/runif.h: Idem * inst/include/Rcpp/stats/random/rweibull.h: Idem * inst/include/Rcpp/stats/random/random.h: Idem * inst/include/Rcpp/stats/random/rcauchy.h: Idem * inst/include/Rcpp/stats/random/rchisq.h: Idem * inst/include/Rcpp/stats/random/rexp.h: Idem * inst/include/Rcpp/stats/random/rf.h: Idem * inst/include/Rcpp/stats/random/rgeom.h: Idem * inst/include/Rcpp/stats/random/rlnorm.h: Idem * inst/include/Rcpp/stats/random/rbeta.h: Idem * inst/include/Rcpp/stats/random/rbinom.h: Idem * inst/include/Rcpp/stats/random/rgamma.h: Idem * inst/include/Rcpp/stats/random/rhyper.h: Idem * inst/include/Rcpp/stats/random/rpois.h: Idem * inst/include/Rcpp/stats/random/rsignrank.h: Idem * inst/include/Rcpp/stats/random/rwilcox.h: Idem 2016-03-07 Dirk Eddelbuettel * inst/include/Rcpp/stats/beta.h: Updated Emacs header and copyright * inst/include/Rcpp/stats/binom.h: Idem * inst/include/Rcpp/stats/cauchy.h: Idem * inst/include/Rcpp/stats/chisq.h: Idem * inst/include/Rcpp/stats/f.h: Idem * inst/include/Rcpp/stats/gamma.h: Idem * inst/include/Rcpp/stats/geom.h: Idem * inst/include/Rcpp/stats/hyper.h: Idem * inst/include/Rcpp/stats/nbeta.h: Idem * inst/include/Rcpp/stats/nbinom.h: Idem * inst/include/Rcpp/stats/nbinom_mu.h: Idem * inst/include/Rcpp/stats/nchisq.h: Idem * inst/include/Rcpp/stats/nf.h: Idem * inst/include/Rcpp/stats/nt.h: Idem * inst/include/Rcpp/stats/pois.h: Idem * inst/include/Rcpp/stats/stats.h: Idem * inst/include/Rcpp/stats/t.h: Idem * inst/include/Rcpp/stats/unif.h: Idem * inst/include/Rcpp/stats/dpq/dpq.h: Idem 2016-03-05 Dirk Eddelbuettel * inst/include/Rcpp/stats/exp.h: Replaced initial Emacs header line with current one, ran M-x untabify, streamlined indentation, update copyright * inst/include/Rcpp/stats/lnorm.h: Idem * inst/include/Rcpp/stats/logis.h: Idem * inst/include/Rcpp/stats/norm.h: Idem * inst/include/Rcpp/stats/weibull.h: Idem 2016-03-04 Dirk Eddelbuettel * inst/unitTests/runit.Function.R: Switched to '/usr/bin/env r' * inst/unitTests/runit.table.R: Idem * inst/unitTests/runit.as.R: Idem * inst/unitTests/runit.Date.R: Idem * inst/unitTests/runit.misc.R: Idem * inst/unitTests/runit.Language.R: Idem * inst/unitTests/runit.subset.R: Idem * inst/unitTests/runit.wrap.R: Idem * inst/unitTests/runit.sugar.R: Idem * inst/unitTests/runit.na.R: Idem * inst/unitTests/runit.String.R: Idem * inst/unitTests/runit.Vector.R: Idem * inst/unitTests/runit.environments.R: Idem * inst/unitTests/runit.Reference.R: Idem * inst/unitTests/runit.Matrix.R: Idem * inst/unitTests/runit.client.package.R: Idem * inst/unitTests/runit.binary.package.R: Idem * inst/unitTests/runit.support.R: Idem * inst/unitTests/runit.S4.R: Idem * inst/unitTests/runit.RObject.R: Idem * inst/unitTests/runit.modref.R: Idem * inst/unitTests/runit.InternalFunctionCPP11.R: Idem * inst/unitTests/runit.attributes.R: Idem * inst/unitTests/runit.sugar.var.R: Idem * inst/unitTests/runit.Module.R: Idem * inst/unitTests/runit.XPTr.R: Idem * inst/unitTests/runit.Module.client.package.R: Idem * inst/unitTests/runit.stats.R: Idem * inst/unitTests/runit.rmath.R: Idem * inst/unitTests/runit.DataFrame.R: Idem * inst/unitTests/runit.wstring.R: Idem * inst/unitTests/runit.InternalFunction.R: Idem 2016-03-03 Dirk Eddelbuettel * inst/examples/FastLM/benchmarkLongley.r: Switched to '/usr/bin/env r' * inst/examples/FastLM/fastLMviaArmadillo.r: Idem * inst/examples/FastLM/fastLMviaGSL.r: Idem * inst/examples/FastLM/lmArmadillo.R: Idem * inst/examples/FastLM/lmGSL.R: Idem * inst/examples/FastLM/benchmark.r: Idem * inst/examples/ConvolveBenchmarks/exampleRCode.r: Idem 2016-02-27 Dirk Eddelbuettel * inst/examples/RcppInline/RcppInlineWithLibsExamples.r: Switched to using '/usr/bin/env r', switch to using 'cxxfunction' and RcppGSL plugin * inst/examples/RcppInline/external_pointer.r: Switched to '/usr/bin/env r' * inst/examples/RcppInline/RcppInlineExample.r: Idem * inst/examples/ConvolveBenchmarks/overhead.r: Idem * inst/include/Rcpp/Fast.h (Rcpp): Undo two const declarations 2016-02-23 Dirk Eddelbuettel * inst/examples/OpenMP/OpenMPandInline.r: Switched to '/usr/bin/env r' * inst/examples/RcppInline/RcppSimpleExample.r: Idem * inst/examples/RcppInline/RObject.r: Idem * inst/examples/RcppInline/UncaughtExceptions.r: Idem 2016-02-21 Dirk Eddelbuettel * inst/examples/functionCallback/newApiExample.r (vecfunc): Switched to using '/usr/bin/env r', switch to using 'cxxfunction' * inst/examples/Misc/fibonacci.r: Switched to using '/usr/bin/env r', added explicit load of Rcpp package * inst/examples/Misc/newFib.r: Switched to using '/usr/bin/env r' * inst/examples/Misc/ifelseLooped.r: Idem * inst/examples/Misc/piBySimulation.r: Idem * inst/examples/SugarPerformance/sugarBenchmarks.r: Idem 2016-02-16 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Added answer on fixed-size limit of arguments 2016-02-07 Dirk Eddelbuettel * R/Attributes.R (sourceCppFunction): Use fully matched seq(along.with=...) * vignettes/Rcpp-FAQ.Rnw: Added a table of contents 2016-02-06 James J Balamuta * vignettes/Rcpp-FAQ.Rnw (Rcpp): Additional material, and corrections, for use on OS X 2016-01-30 Qiang Kou * inst/include/Rcpp/vector/Subsetter.h: Fix the error under gc * inst/unitTests/cpp/Vector.cpp : Add tests * inst/unitTests/runit.Vector.R : Idem 2016-01-29 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw (Rcpp): Add new entry about required TeXlive installation to build vignettes (issue #422) 2016-01-22 Dirk Eddelbuettel * DESCRIPTION (Version): Mark as 0.12.3.1 2016-01-22 Daniel C. Dillon * R/Attributes.R: Add plugin for cpp14 2016-01-18 Daniel C. Dillon * inst/include/Rcpp/Nullable.h: Add isUsable() * inst/unitTests/cpp/misc.cpp: Add tests * inst/unitTests/runit.misc.R: Idem 2016-01-17 Nathan Russell * inst/include/Rcpp/sugar/functions/median.h: New function * inst/unitTests/cpp/sugar.cpp: Add tests * inst/unitTests/runit.sugar.R: Idem 2016-01-17 Daniel C. Dillon * inst/include/Rcpp/Nullable.h: Add as() and clone() * inst/unitTests/cpp/misc.cpp: Add tests * inst/unitTests/runit.misc.R: Idem 2016-01-13 Kirill Mueller * inst/include/Rcpp/Nullable.h: Added const support * inst/unitTests/cpp/misc.cpp: Added tests for const support 2016-01-10 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.3 * inst/NEWS.Rd: Release 0.12.3 * vignettes/Rcpp.bib: Release 0.12.3 * inst/include/Rcpp/config.h: Release 0.12.3 * debian/*: Changes for Debian release of 0.12.3 * vignettes/Rcpp.bib: Updated all CRAN reference to current versions 2016-01-09 Dirk Eddelbuettel * Contributing.md: Added to GitHub repo * .Rbuildignore: Ensure Contributing.md is not in R package, also removed two old entries 2015-12-29 Joshua Pritikin * inst/include/Rcpp/Module.h: Initialize base class in copy ctor * inst/include/Rcpp/macros/interface.h: Idem 2015-12-12 Qiang Kou * inst/include/Rcpp/String.h: std::hash * inst/unitTests/cpp/wrap.cpp: Unit tests * inst/unitTests/runit.wrap.R: Unit tests 2015-12-04 Qiang Kou * inst/include/Rcpp/vector/Matrix.h: Add math operators between matrix and scalar * inst/unitTests/runit.Matrix.R: Unit tests * inst/unitTests/cpp/Matrix.cpp: Unit tests 2015-11-27 Daniel C. Dillon * inst/include/Rcpp/vector/proxy.h: const_iterators for CharacterVector now work analogously to iterators * inst/include/Rcpp/vector/const_generic_proxy.h: Idem * inst/include/Rcpp/vector/const_string_proxy.h: Idem * inst/include/Rcpp/vector/traits.h: Idem * inst/unitTests/cpp/Vector.cpp: Tests for above * inst/unitTests/runit.Vector.R: Idem [ All this was commited on Sep 5 but only merged Nov 27 ] 2015-11-25 JJ Allaire * src/attributes.cpp: Avoid invalid function names when generating C++ interfaces. 2015-11-15 Kazuki Fukui > * src/attributes.cpp: Insert extra space around & in interface 2015-11-14 Dirk Eddelbuettel * .travis.yml: Add token for secure Slack & Travis integration 2015-11-14 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.2 * inst/NEWS.Rd: Release 0.12.2 * vignettes/Rcpp.bib: Release 0.12.2 * inst/include/Rcpp/config.h: Release 0.12.2 * debian/*: Changes for Debian release of 0.12.2 * vignettes/Rcpp.bib: Updated all CRAN reference to current versions 2015-11-13 Dirk Eddelbuettel * inst/include/Rcpp/complex.h: Define a header guard for dplyr to prevent errorneous redefinition of operator<<() via dplyr 2015-11-11 Dirk Eddelbuettel * inst/include/Rcpp/vector/Matrix.h: Further simplification 2015-11-11 Qiang Kou * include/Rcpp/complex.h: operator<< for Rcomplex 2015-11-10 Dirk Eddelbuettel * inst/include/Rcpp/vector/Matrix.h: Added transpose for character matrices as well * inst/unitTests/runit.Matrix.R: New unit tests * inst/unitTests/cpp/Matrix.cpp: Ditto 2015-11-08 Dirk Eddelbuettel * inst/include/Rcpp/vector/Matrix.h: Matrix transpose is now a free function for both INTSXP and REALSXP * inst/unitTests/runit.Matrix.R: New unit tests * inst/unitTests/cpp/Matrix.cpp: Ditto 2015-11-08 Daniel C. Dillon * inst/include/Rcpp/Nullable.h: No longer prevent assignment of R_NilValue to Nullable<> in function signatures * inst/include/Rcpp/vector/Matrix.h: Use showpoint in operator<<() 2015-11-07 Dirk Eddelbuettel * inst/include/Rcpp/vector/Matrix.h: Beginnings of a Matrix transpose 2015-11-06 Kevin Ushey * inst/include/Rcpp/vector/Subsetter.h: Add sugar math operators * inst/unitTests/runit.subset.R: Unit tests * inst/unitTests/cpp/Subset.cpp: Unit tests * inst/NEWS.Rd: NEWS entry 2015-11-01 Qiang Kou * inst/include/Rcpp/vector/MatrixColumn.h: Fix overflow 2015-11-01 Dirk Eddelbuettel * DESCRIPTION: Roll Version: to 0.12.1.4 2015-10-30 Nathan Russell * inst/include/Rcpp/sugar/functions/cummax.h: New sugar function * inst/include/Rcpp/sugar/functions/cummin.h: New sugar function * inst/include/Rcpp/sugar/functions/cumprod.h: New sugar function * inst/unitTests/cpp/sugar.cpp: Unit test support for new functions * inst/unitTests/runit.sugar.R: Ditto 2015-10-08 Tianqi Chen * inst/include/Rcpp/api/meat/is.h: Enhance the check for Rcpp Module objects (PR #381 fixing #380) 2015-10-01 JJ Allaire * src/attributes.cpp: Enable export of C++ interface for functions that return void 2015-09-28 Dirk Eddelbuettel * inst/NEWS.Rd: GitHub pull requests and issues are now linked * src/barrier.cpp: Use SET_STRING_ELT() on LHS (with thanks to Luke) 2015-09-21 Dirk Eddelbuettel * inst/include/Rcpp/String.h: Before assigning ensure we received exactly one string argument 2015-09-10 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.1 * inst/NEWS.Rd: Release 0.12.1 * vignettes/Rcpp.bib: Release 0.12.1 * inst/include/Rcpp/config.h: Release 0.12.1 * debian/*: Changes for Debian release of 0.12.1 2015-09-09 Dirk Eddelbuettel * vignettes/Rcpp-attributes.Rnw: Less harsh grey border around code * vignettes/Rcpp-*.Rnw: Ditto * inst/include/Rcpp/String.h: More comparison operators 2015-09-08 Daniel C. Dillon * inst/include/Rcpp/vector/string_proxy.h: More comparison operators * inst/include/Rcpp/vector/const_string_proxy.h: More comparison operators 2015-09-08 Florian Plaza Onate * inst/include/Rcpp/Dimension.h: Correct creation and access of large matrices * inst/include/Rcpp/vector/Matrix.h: Ditto 2015-09-07 Dirk Eddelbuettel * inst/include/Rcpp/Nullable.h: New class for objects which may be NULL * inst/unitTests/cpp/Vector.cpp: Unit tests for Nullable * inst/unitTests/runit.Vector.R: Ditto 2015-09-06 Daniel C. Dillon * inst/include/Rcpp/String.h: Make strings and string_proxies comparable * inst/unitTests/cpp/String.cpp: Unit tests for above * inst/unitTests/runit.String.R: Ditto 2015-09-05 Daniel C. Dillon * inst/include/Rcpp/vector/Matrix.h: Matrix now has appropriate operator<< * inst/include/Rcpp/vector/Vector.h: Vector now has appropriate operator<< * inst/unitTests/cpp/Vector.cpp: Unit tests for above 2015-09-01 Florian Plaza Onate * inst/include/Rcpp/vector/Subsetter.h: Allow logical subsets to be assigned to a vector of size 1 (pull request #349, discussed in issue #345) * inst/unitTests/cpp/Subset.cpp: Add unit test for above * inst/unitTests/runit.subset.R: Ditto 2015-08-31 Dirk Eddelbuettel * DESCRIPTION (Version, Date): Roll Version and Date 2015-08-30 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated RcppGSL entry 2015-08-29 Dirk Eddelbuettel * vignettes/Rcpp.bib: Add RcppZiggurat entry * inst/include/Rcpp/utils/tinyformat.h: Updated to current upstream version keeping our local modifications / adaptations (PR #357) 2015-08-29 Qiang Kou * inst/include/Rcpp/vector/Subsetter.h: Enable logical subsetting on both LHS and RHS, eg 'a[b > 3] = b[b > 3]' (pull request #352 addressing issue #345) * inst/unitTests/cpp/Subset.cpp: Ditto * inst/unitTests/runit.subset.R: Unit tests for above 2015-08-26 Dirk Eddelbuettel * inst/unitTests/testRcppClass/src/rcpp_module.cpp: Renamed Module 'World' to 'RcppClassWorld' to avoid multiple modules with same name (pull request #351, fixed issue #350) * inst/unitTests/testRcppClass/man/Rcpp_class_examples.Rd: Ditto * inst/unitTests/testRcppClass/R/load.R: Ditto * inst/unitTests/testRcppClass/NAMESPACE: Ditto * inst/unitTests/runit.Module.client.package.R: Re-enable test * inst/unitTests/testRcppModule/src/rcpp_module.cpp: Renamed Module 'World' to 'RcppModuleWorld' to avoid multiple modules with same name * inst/unitTests/cpp/modref.cpp: Rename 'World' to 'ModRefWorld' * inst/unitTests/runit.modref.R (test.modRef): Ditto * inst/unitTests/cpp/Module.cpp: Rename 'World' to 'ModuleWorld' * inst/unitTests/runit.Module.R (test.Module): Ditto 2015-08-25 Kurt Hornik * R/loadModule.R: For now=TRUE, always set .botched to FALSE which corresponds to the case of the methods package being in the search path * inst/include/Rcpp/Reference.h: Call call with the internal Namespace 2015-08-24 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated R / R Core references 2015-08-23 Romain Francois * inst/include/Rcpp/Benchmark/Timer.h: Silence 'g++ -pedantic' by replaceing one R_xlen_t by size_t (pull request #348) 2015-08-19 Florian Plaza Onate * inst/include/Rcpp/vector/Vector.h: Add 'at' methods which implement accessors with bounds cheking (pull request #342, fixes issue #341) * inst/include/Rcpp/vector/Matrix.h: Ditto * inst/unitTests/cpp/Vector.cpp: Add unit tests for at acessors * inst/unitTests/cpp/Matrix.cpp: Ditto * inst/unitTests/runit.Vector.R: Ditto * inst/unitTests/runit.Matrix.R: Ditto 2015-08-18 Dirk Eddelbuettel * inst/unitTests/runit.Module.client.package.R: Disabled for bad interaction of Rcpp Modules and R 3.2.2 2015-08-15 Florian Plaza Onate * inst/include/Rcpp/vector/converter.h: Correct conversion from const char argument (pull request #344, fixes issue #343) 2015-08-14 Florian Plaza Onate * inst/include/Rcpp/vector/DimNameProxy.h: Add assignment operator, refactor code, update error message formatting (pull request #339) 2015-08-05 Kevin Ushey * src/api.cpp: use `_WIN32` instead of `WIN32` 2015-08-02 Dirk Eddelbuettel * R/Attributes.R (sourceCpp): In no-rebuild-needed case, also set a default directory restoration via on.exit() (pull request #335, addressing issue #309) 2015-07-24 Dirk Eddelbuettel * DESCRIPTION: Release 0.12.0 * inst/NEWS.Rd: Release 0.12.0 * vignettes/Rcpp.bib: Release 0.12.0 * inst/include/Rcpp/config.h: Release 0.12.0 * debian/*: Changes for Debian release of 0.12.0 2015-07-23 Dirk Eddelbuettel * inst/include/Rcpp/Symbol.h: Use Rf_installChar(x) instead of Rf_install(CHAR(X)) if R 3.2.0 or later is used 2015-07-07 Qiang Kou * src/include/Rcpp/String.h: Ensure proper initialization of String objects from two constructors * inst/unitTests/cpp/String.cpp: New unit test * inst/unitTests/runit.String.R: Ditto 2015-07-21 Kevin Ushey * inst/include/Rcpp/api/meat/Rcpp_eval.h: don't use 'CDDDR' 2015-07-20 Dirk Eddelbuettel * DESCRIPTION: Rolled minor Date and Version * R/Attributes.R: Use explicit 'utils::assignInMyNamespace' * R/Rcpp.package.skeleton.R: Use explicit 'utils::package.skeleton' 2015-07-17 JJ Allaire * Rcpp.Rproj: don't use devtools mode in RStudio (enables the Test Package command to invoke the RUnit based test-suite) * src/attributes.cpp: Correctly handle signature termination characters ('{' or ';') contained in quotes 2015-07-16 Kevin Ushey * inst/include/Rcpp/api/meat/Rcpp_eval.h: Don't use 'R_ToplevelExec'; ensure Rcpp_eval respects previously established handlers. Capture errors + interrupts with R-level 'tryCatch'. * inst/NEWS.Rd: Add news entry 2015-07-14 JJ Allaire * src/attributes.cpp: fix crash on second call to sourceCpp 2015-07-07 Qiang Kou * src/include/Rcpp/String.h: Use Rcpp_PreserveObject and Rcpp_ReplaceObject to protect underlying SEXP inside String objects 2015-07-07 Matt P. Dziubinski * inst/include/Rcpp/sugar/functions/var.h: Variance -- changed from the unstable formula back to the stable (two-pass) formula, fixed support for complex numbers (formula correction). * inst/unitTests/runit.sugar.var.R: Added tests for complex variance computation, applied simple code refactoring. 2015-07-04 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated reference to several CRAN packages 2015-07-02 Kevin Ushey * .clang_format: Added 2015-06-25 Kevin Ushey * inst/include/Rcpp/api/meat/Rcpp_eval.h: reset error after Rcpp_eval * inst/unitTests/cpp/Function.cpp: unit tests * inst/unitTests/runit.Function.R: unit tests * inst/include/Rcpp/Function.h: catch empty error messages * inst/include/Rcpp/api/meat/Rcpp_eval.h: protect call 2015-06-24 Qiang Kou * inst/include/Rcpp/String.h: Support encodings * src/String.cpp: Ditto * inst/unitTests/runit.String.R: Add unit tests 2015-06-18 Dirk Eddelbuettel * R/Attributes.R (evalCpp): Add support for plugings argument * man/evalCpp.Rd: Document argument 2015-06-07 JJ Allaire * src/attributes.cpp: Don't load sourceCpp dynamic library if it's already been loaded 2015-06-05 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R (Rcpp.package.skeleton): Remove `character.only=TRUE` from `requireNamespace()` as it happens to flip the boolean value too 2015-06-03 Qiang Kou * inst/include/Rcpp/*: Finish changing R_len_t to R_xlen_t * src/*: Ditto 2014-05-27 Romain Francois * inst/include/Rcpp/DataFrame.h: Safe DataFram constructor 2015-05-16 Qiang Kou * inst/include/Rcpp/*: Begin changing R_len_t to R_xlen_t * src/*: Ditto 2015-05-17 Matt P. Dziubinski * inst/include/Rcpp/platform/compiler.h: Added RCPP_USING_CXX0X_OR_LATER * inst/include/Rcpp/sugar/functions/sapply.h: Updated to support lambda functions 2015-05-01 Kevin Ushey * vignettes/Rcpp-FAQ.Rnw: Notes on installing gfortran 2015-05-01 Dirk Eddelbuettel * DESCRIPTION: Release 0.11.6 * inst/NEWS.Rd: Release 0.11.6 * inst/include/Rcpp/config.h: Release 0.11.6 * debian/*: Changes for Debian release of 0.11.6 2015-04-27 JJ Allaire * src/Module.cpp: Revert parts of PR291 pertaining to Modules and {BEGIN/END}_RCPP * inst/include/Rcpp/api/meat/module/Module.h: Ditto * inst/include/Rcpp/InternalFunctionWithStdFunction.h: Ditto * inst/include/Rcpp/module/Module_generated_CppFunction.h: Ditto * inst/include/Rcpp/module/class.h: Ditto 2014-04-25 Romain Francois * inst/include/Rcpp/vector/Vector.h: update the parameterization of Vector cache * inst/include/Rcpp/vector/traits.h: ... * inst/include/Rcpp/vector/00_forward_proxy.h: ... * inst/unitTests/runit.Vector.R: test for above changes * inst/unitTests/cpp/Vector.cpp: ... 2015-04-22 Kevin Ushey * inst/include/Rcpp/utils/tinyformat.h: don't use C++11 features 2015-04-14 Dirk Eddelbuettel * .travis.yml (sudo): Adding 'sudo: required' to force older Travis backend 2014-04-14 Romain Francois * inst/include/Rcpp/api/meat/is.h: added is__simple * inst/include/Rcpp/config.h: not using floating point arithmetic in preprocessor 2015-04-12 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Also load Rcpp to make cppFunction visible 2014-04-11 Romain Francois * inst/include/Rcpp/macros/macros.h: Reworked BEGIN_RCPP and END_RCPP * inst/include/Rcpp/*: Removed BEGIN_RCPP and END_RCPP from a few files * src/Module.cpp: But added here 2015-04-19 Jonathan Marshall * inst/include/Rcpp/vector/string_proxy.h: Adds empty() constructor * inst/include/Rcpp/vector/const_string_proxy.h: Ditto 2015-03-18 Dmitrii Meleshko * inst/include/Rcpp/vector/Matrix.h: Added default ctor for 0x0 matrix 2015-03-18 JJ Allaire * R/Attributes.R: Revert to use of gcc 4.6.3 with Rtools 3.3 2015-03-16 JJ Allaire * src/attributes.cpp: Fix failing local include test (normalize path of base source file so comparisons work on Windows). 2015-03-15 Dirk Eddelbuettel * R/Attributes.R (.rtoolsPath): Replace trimws() use with a local variant 2015-03-11 JJ Allaire * R/Attributes.R: Rtools 3.3 is now located and used for compilation under R 3.2. 2015-03-11 Kevin Ushey * inst/include/RcppCommon.h: Move headers into major/minor protection * inst/include/Rcpp/r/headers.h: New file 2015-03-04 Dirk Eddelbuettel * DESCRIPTION: Release 0.11.5 * inst/NEWS.Rd: Release 0.11.5 * inst/include/Rcpp/config.h: Release 0.11.5 * debian/*: Changes for Debian release of 0.11.5 2015-03-03 Dirk Eddelbuettel * inst/include/Rcpp/routines.h: Additional application of the 'attribute_hidden' macro for a number of routines in Rcpp::internal 2015-03-02 Dirk Eddelbuettel * inst/include/Rcpp/print.h (Rcpp): New inline function Rcpp::print() * inst/include/RcppCommon.h: Include new header * src/api.cpp: Commented-out print() in global namespace * src/Rcpp_init.cpp: Commented-out registration of print() * inst/include/Rcpp/routines.h: Commented-out initialization 2015-03-01 Dirk Eddelbuettel * src/api.cpp: New function print() as a wrapper around Rf_PrintValue() * src/Rcpp_init.cpp: Corresponding registration for print() * inst/include/Rcpp/routines.h: Corresponding initialization 2015-02-25 Dirk Eddelbuettel * inst/include/Rcpp/routines.h: Use the 'attribute_hidden' define from the R header R_ext/Visibility.h to protect symbols (cf #264) * inst/include/RcppCommon.h: Also include R_ext/Visibility.h 2015-02-24 JJ Allaire * src/attributes.cpp: Guard against includes referencing themselves (and thus creating an endless loop of include processing); Process attributes in included files; Automatically build implementation files (*.cc; *.cpp) corresponding to local header files if they exist. 2015-02-20 Lionel Henry * inst/include/Rcpp/Function.h New Function constructors that will perform function-lookup in an environment or in a namespace. 2015-02-19 Dirk Eddelbuettel * DESCRIPTION: Bump Version: and Date: 2015-02-19 Lionel Henry * inst/include/Rcpp/Environment.h Allow new_env() to create an environment with a specified parent 2015-02-19 JJ Allaire * vignettes/Rcpp-attributes.Rnw: Add note on using inline keyword from shared header files. 2015-02-17 JJ Allaire * vignettes/Rcpp-attributes.Rnw: Update attributes vignette with docs on new features. 2015-02-14 JJ Allaire * src/attributes.cpp: Allow includes of local files (e.g. #include "foo.hpp") in sourceCpp * Rcpp.Rproj: Specify Sweave as Rnw handler for RStudio * vignettes/*.Rnw: Add driver magic comment and turn off Sweave concordance. * vignettes/.gitignore: Ignore artifacts of PDF preview 2015-02-13 Dirk Eddelbuettel * .travis.yml (install): Switch to using ppa:edd/misc to install all the R packages needed for the Travis CI run as r-cran-* binary packages 2015-02-13 JJ Allaire * src/attributes.cpp: Allow 'R' to come immediately after '***' for defining embedded R code chunks in sourceCpp 2015-02-12 JJ Allaire * DESCRIPTION: bump version * src/attributes.cpp: Add rng parameter to Rcpp::export to prevent inclusion of RNGScope in generated code; recognize Rtools 3.2 2015-02-06 Kevin Ushey * inst/include/Rcpp/vector/Subsetter.h: compare CHARSXP pointers rather than string contents in subsetter 2015-02-03 JJ Allaire * src/attributes.cpp: Simplify generated attributes code for RNGScope (use RObject and it's destructor rather than SEXP protect/unprotect). * vignettes/Rcpp-package.Rnw: Update docs on generated code. 2015-02-03 JJ Allaire * inst/include/Rcpp/exceptions.h: Add Rcpp::warning function as wrapper for Rf_warning 2014-02-03 JJ Allaire * inst/include/Rcpp/XPtr.h: Improvements to XPtr including new checked_get and release functions and improved behavior (throw an exception rather than crash) when a NULL external pointer is dereferenced. * inst/unitTests/runit.XPTr.R: tests for XPtr improvements. * inst/unitTests/cpp/XPtr.cpp: tests for XPtr improvements. 2014-02-03 JJ Allaire * R/Attributes.R: Include pkg_types.h file in RcppExports.cpp if it's present in inst/include or src * src/attributes.cpp: Include pkg_types.h file in generated C++ interface file if it's present in inst/include or src 2015-02-02 JJ Allaire * R/exceptions.R: Evaluate R code within an R_toplevelExec block * include/Rcpp/api/meat/Rcpp_eval.h: Evaluate R code within an R_toplevelExec block 2015-01-25 Kevin Ushey * inst/include/Rcpp/utils/tinyformat.h: define an error handler for tinyformat (using ::Rcpp::stop) to not spill assert 2015-01-20 Dirk Eddelbuettel * DESCRIPTION: Release 0.11.4 * inst/NEWS.Rd: Release 0.11.4 * inst/include/Rcpp/config.h: Release 0.11.4 * debian/*: Changes for Debian release of 0.11.4 2015-01-19 Kevin Ushey * inst/include/Rcpp/r/headers.h: move R headers inclusion to own file; move sysmacros.h workarounds to here * inst/include/RcppCommon.h: idem * inst/include/Rcpp/platform/sysmacros.h: idem 2015-01-19 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated to current package versions * vignettes/getCurrentVersionsOfCitedPackages.R: New helper function * .Rbuildignore: Added vignettes/getCurrentVersionsOfCitedPackages.R * R/unit.tests.R (test): Use requireNamespace() instead of require() * R/unit.tests.R (test): Ditto 2015-01-19 Wush Wu * inst/include/Rcpp/sugar/functions/var.h: Support four vector types * inst/unitTests/runit.sugar.var.R: Added corresponding tests 2015-01-16 Kevin Ushey * inst/include/Rcpp/String.h: fix push_front() * inst/unitTests/runit.String.R: test * inst/unitTests/cpp/String.cpp: test 2015-01-15 Kevin Ushey * inst/include/Rcpp/platform/sysmacros.h: remove leaked macros 'major', 'minor', 'makedev' from * inst/include/RcppCommon.h: ditto * inst/unitTests/cpp/Vector.cpp: simple test 2015-01-08 Dirk Eddelbuettel * inst/examples/OpenMP/GNUmakefile: Renamed from Makefile because it contains GNU make extentions (which we happen to like) * inst/examples/ConvolveBenchmarks: Ditto 2015-01-02 Kevin Ushey * inst/include/Rcpp/sugar/functions/setdiff.h: fix for setequals * inst/unitTests/cpp/sugar.cpp: unit tests * inst/unitTests/runit.sugar.R: unit tests 2015-01-01 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/mean.h: Return type is double, not storage type; also added logical vector case; also added integer case to correctly deal with NA values * inst/unitTests/runit.sugar.R: Added unit tests for new sugar mean() * inst/unitTests/cpp/sugar.cpp: C++ side of new unit tests 2014-12-31 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/mean.h: Support int and complex 2014-12-30 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/mean.h: Use two-pass method 2014-12-29 Kevin Ushey * inst/include/Rcpp/macros/macros.h: reformat for legibility 2014-12-11 Yixuan Qiu * inst/include/Rcpp/internal/r_vector.h: Internal functions to help detect unqualified vector types for sorting, with the help of Romain Francois * inst/include/Rcpp/vector/Vector.h: Disallow sorting on List, RawVector and ExpressionVector, from the discussion with Dirk Eddelbuettel and Kevin Ushey 2014-11-30 Romain Francois * inst/include/Rcpp/vector/proxy.h: Const iteration correction * inst/include/Rcpp/sugar: Ditto in three files 2014-11-25 Dirk Eddelbuettel * inst/include/Rcpp/grow.h: Apply additional Shield<> use around tail object as suggested by Martin Morgan on the rcpp-devel list 2014-11-24 Dirk Eddelbuettel * inst/include/Rcpp/config.h: Release version is still 0.11.3 2014-11-23 Dirk Eddelbuettel * inst/include/Rcpp/config.h: New macro RcppDevVersion to account for four-part development versions such as the current 0.11.3.2 * DESCRIPTION: Version incremented to 0.11.3.2 2014-11-23 Romain Francois * inst/include/Rcpp/exceptions.h: Richer formatting for Rcpp::stop * inst/include/Rcpp/utils/tinyformat.h: Backend for formattinh * inst/unitTests/runit.misc.R: Added new unit test * inst/unitTests/cpp/misc.cpp: C++ backend for test 2014-11-19 Dirk Eddelbuettel * .travis.yml: Temporary stop-gap measure of setting CRAN to something other than the RStudio CDN which currently has DNS issue * inst/include/Rcpp/internal/NAComparator.h: Support sorting of complex numbers, thanks to patch by Yixuan Qiu (in PR #202) 2014-11-08 Kevin Ushey * R/Attributes.R: Fix regular expression used to find source files for compileAttributes 2014-11-02 Dirk Eddelbuettel * inst/unitTests/RcppTestA: Rename to inst/unitTests/testRcppPackage * inst/unitTests/testRcppPackage: Updated throughout * inst/include/Rcpp/Rmath.h: As suggested by Kevin, test for R_VERSION via #define to conditon on R >= 3.1.2 -- this does not require a hard constraint in DESCRIPTION yet on newer R will get R::[dpq]nbinom_mu() 2014-11-01 Dirk Eddelbuettel * src/api.cpp: Do not include execinfo.h on AIX, per r-devel discussion with Mike Beddo, and http://sf.net/p/predef/wiki/OperatingSystems/ 2014-10-29 Dirk Eddelbuettel * inst/include/Rcpp/Rmath.h: Comment out R::[dpqr]nbinom_mu functions as not declared by R with Rf_* name-mapping prefixes 2014-10-17 Chenliang Xu * R/Attributes: Enable scanning of header files 2014-10-03 JJ Allaire * R/Attributes.R: Only look for plugins in the package's namespace (rather than entire search path) 2014-10-01 Kevin Ushey * inst/include/Rcpp/vector/ListOf.h ListOf inherits relevant proxies * inst/unitTests/cpp/ListOf.cpp: Idem * inst/unitTests/runit.ListOf.R: Idem 2014-09-29 Dirk Eddelbuettel * debian/*: Changes for Debian release of 0.11.3 * inst/NEWS.Rd: Removed a double entry 2014-09-27 Dirk Eddelbuettel * DESCRIPTION: Release 0.11.3 * inst/NEWS.Rd: Release 0.11.3 * inst/include/Rcpp/config.h: Release 0.11.3 * ChangeLog: Added a few more entries based on commit log * inst/NEWS.Rd: Idem 2014-09-26 JJ Allaire * DESCRIPTION: Bump version to enable checking for dryRun. 2014-09-23 JJ Allaire * R/Attributes.R: Add dryRun parameter to sourceCpp. 2014-09-21 Dirk Eddelbuettel * DESCRIPTION: Shorten Description: to single paragraph 2014-09-21 Kevin Ushey * inst/unitTests/runit.environments.R: Use 'checkIdentical' as it's a more appropriate expression of intent 2014-09-15 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R: Use more neutral default name, email settings * man/Rcpp.package.skeleton.Rd: Document these 2014-09-14 Dirk Eddelbuettel * inst/unitTests/testRcppClass/man/Rcpp_class_examples.Rd: Similar update to yesterday's update for testRcppModule 2014-09-14 Kevin Ushey * inst/include/Rcpp/vector/Vector.h: Alternate strategy using SFINAE * inst/include/Rcpp/traits/traits.h: Idem * inst/include/Rcpp/traits/enable_if.h: Idem 2014-09-13 Kevin Ushey * inst/include/Rcpp/vector/Vector.h: Allow logical vectors to be created from bools * inst/unitTests/runit.Vector.R: Idem * inst/unitTests/cpp/Vector.cpp: Idem 2014-09-13 Dirk Eddelbuettel * inst/skeleton/Rcpp_modules_examples.Rd: Added to document modules examples * inst/unitTests/testRcppModule/NAMESPACE: Updated for current Modules use * inst/unitTests/testRcppModule/R/zzz.R: Updated for current Modules use * inst/unitTests/testRcppModule/man/Rcpp_modules_examples.Rd: Also added here 2014-09-10 Dirk Eddelbuettel * R/R/Rcpp.package.skeleton.R: If available, pkgKitten used for skeleton pkg 2014-09-09 Dirk Eddelbuettel * R/unit.tests.R: Fully qualify three functions from RUnit via :: 2014-09-03 Kevin Ushey * inst/include/Rcpp/Environment.h: make new_env a free function 2014-09-02 Kevin Ushey * inst/include/Rcpp/api/meat/proxy.h: Finish meat reintroduction + tests * inst/unitTests/runit.wrap.R: Idem * inst/unitTests/cpp/wrap.cpp: Idem * inst/include/Rcpp/proxy/FieldProxy.h: Idem 2014-09-02 Dirk Eddelbuettel * inst/include/Rcpp/vector/Vector.h: Reversing change from Aug 30: the Vector ctor from char* and string are used for CharacterVector() 2014-09-02 JJ Allaire * R/Attributes.R: Include LinkingTo in DESCRIPTION fields scanned to confirm that C++ dependencies are referenced by package. 2014-09-01 Yixuan Qiu * inst/include/Rcpp/vector/Vector.h: fix return value of range eraser 2014-09-01 Kevin Ushey * inst/include/Rcpp/vector/ListOf.h: `size()` member function should return `R_len_t` rather than `int` 2014-08-30 Kevin Ushey * inst/include/Rcpp/Environment.h: Add 'new_env' function 2014-08-30 Dirk Eddelbuettel * inst/include/Rcpp/vector/Vector.h: Mark two 'from string' ctors as deprecated following a suggestion by Yixuan Qiu [reversed on 2014-09-02] 2014-08-18 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Added a new entry regarding licensing of packages stressing that any combined work linking to the GPL-ed R will also be under the terms of the GNU General Public License. 2014-08-13 Kevin Ushey * inst/include/Rcpp/api/meat/meat.h: Reintroduce meat * inst/include/Rcpp/api/meat/proxy.h: Idem * inst/include/Rcpp/proxy/AttributeProxy.h: Idem * inst/include/Rcpp/proxy/Binding.h: Idem * inst/include/Rcpp/proxy/NamesProxy.h: Idem * inst/include/Rcpp/proxy/SlotProxy.h: Idem * inst/include/Rcpp/proxy/TagProxy.h: Idem * inst/include/Rcpp/proxy/proxy.h: Idem 2014-08-08 Christian Authmann * inst/unitTests/cpp/InternalFunction.cpp: New unit test support * inst/unitTests/cpp/InternalFunctionCPP11.cpp: Idem * inst/unitTests/runit.InternalFunction.R: Idem * inst/unitTests/runit.InternalFunctionCPP11.R: Idem 2014-08-06 Christian Authmann * inst/include/Rcpp/InternalFunctionWithStdFunction.h: Extend the existing Rcpp::InternalFunction interface to work with std::function, conditional on a sufficient C++11 support by the compiler 2014-08-05 Dirk Eddelbuettel * inst/include/Rcpp/Date.h: Remove a const qualifier which triggers a warnings as 'type qualifiers ignored on function return type' 2014-08-03 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Updated with respect to OS X installations requiring Fortran (to e.g. build against RcppArmadillo) 2014-07-29 Kevin Ushey * inst/include/Rcpp/vector/no_init.h: Add no_init for matrices * inst/include/Rcpp/vector/Matrix.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem * inst/unitTests/runit.Matrix.R: Idem * inst/unitTests/cpp/Matrix.cpp: Idem 2014-07-29 Dirk Eddelbuettel * inst/include/Rcpp/vector/proxy.h: Removed operator bool() cast as discussed by Christian Authmann on rcpp-devel 2014-07-28 Dirk Eddelbuettel * inst/include/Rcpp/generated/InternalFunction__ctors.h: Updated from corrected creator script 2014-07-25 Romain Francois * inst/include/Rcpp/Benchmark/Timer.h: Added new static method get_timers() to return a vector of timers useful for multithreaded contexts; also removed two unused old member functions (cf #157) 2014-07-14 Kevin Ushey * inst/unitTests/runit.Matrix.R: DimNames Proxy * inst/unitTests/cpp/Matrix.cpp: Idem * inst/include/Rcpp/vector/Matrix.h: Idem * inst/include/Rcpp/vector/DimNameProxy.h: Idem 2014-07-12 Kevin Ushey * R/Attributes.R: Strip version in .parseLinkingTo 2014-07-12 Dirk Eddelbuettel * inst/include/Rcpp/generated/InternalFunction__ctors.h: Regenerated with tighter whitespace and updated header information from updated generator script in corresponding rcpp-scripts repo * inst/include/Rcpp/module/Module_generated_CppFunction.h: Idem * inst/include/Rcpp/module/Module_generated_CppMethod.h: Idem * inst/include/Rcpp/module/Module_generated_Pointer_CppMethod.h: Idem * inst/include/Rcpp/module/Module_generated_Pointer_method.h: Idem * inst/include/Rcpp/module/Module_generated_function.h: Idem * inst/include/Rcpp/module/Module_generated_get_signature.h: Idem * inst/include/Rcpp/module/Module_generated_method.h: Idem 2014-07-09 Kevin Ushey * inst/include/Rcpp/Language.h: OUT -> RESULT_TYPE * inst/include/Rcpp/generated/InternalFunction__ctors.h: Idem * inst/include/Rcpp/module/Module_generated_CppFunction.h: Idem * inst/include/Rcpp/module/Module_generated_CppMethod.h: Idem * inst/include/Rcpp/module/Module_generated_Pointer_CppMethod.h: Idem * inst/include/Rcpp/module/Module_generated_Pointer_method.h: Idem * inst/include/Rcpp/module/Module_generated_function.h: Idem * inst/include/Rcpp/module/Module_generated_get_signature.h: Idem * inst/include/Rcpp/module/Module_generated_method.h: Idem * inst/include/Rcpp/module/get_return_type.h: Idem * inst/include/Rcpp/sugar/block/SugarBlock_1.h: Idem * inst/include/Rcpp/sugar/block/SugarBlock_2.h: Idem * inst/include/Rcpp/sugar/block/SugarBlock_3.h: Idem * inst/include/Rcpp/sugar/block/SugarMath.h: Idem * inst/include/Rcpp/sugar/functions/complex.h: Idem 2014-07-08 Dirk Eddelbuettel * inst/include/Rcpp/InternalFunction.h: Add missing update(SEXP) method per GitHub Pull Request #152, with thanks to Omar Andres Zapata Mesa * inst/THANKS: Updated 2014-07-04 Dirk Eddelbuettel * vignettes/Rcpp-unitTests.Rnw: Commented-out copy of results to /tmp 2014-06-29 JJ Allaire * R/Attributes.R: fix setwd problem when sourceCpp used a relative path and included an R code chunk 2014-06-20 Dirk Eddelbuettel * include/Rcpp/sugar/functions/ifelse.h: Applied pull request #150 by Romain to have operator{} return the correct NA type 2014-06-11 Dirk Eddelbuettel * inst/include/Rcpp/macros/macros.h: No longer include macros/preprocessor_generated.h which was deprecated as of Rcpp 0.10.5 * inst/include/Rcpp/macros/preprocessor_generated.h: Removed 2014-06-08 Dirk Eddelbuettel * cleanup: Do not remove 'build/Rcpp.pdf', thanks to hint by Kurt / CRAN 2014-06-06 Dirk Eddelbuettel * DESCRIPTION: Release 0.11.2 * inst/NEWS.Rd: Release 0.11.2 * inst/include/Rcpp/config.h: Release 0.11.2 * debian/*: Similarly updated for new release to Debian * tests/doRUnit.R: Additional check added for release version case 2014-06-05 JJ Allaire * R/Attributes.R: Use -std=c++0x for cpp11 plugin on Windows if R <= 3.0 2014-05-28 Kevin Ushey * inst/include/Rcpp/vector/vector_from_string.h: Protect result of Rf_mkString 2014-05-24 Dirk Eddelbuettel * .Rbuildignore: Add .dir-locals.el 2014-05-23 Dirk Eddelbuettel * R/Module.R (new_dummyObject): Remove erraneous quotes * .dir-locals.el: Setting tab-width to 8 2014-05-18 Kevin Ushey * inst/include/Rcpp/vector/Vector.h: Safer casting to fix #146 * inst/include/Rcpp/Environment.h: Idem * inst/include/Rcpp/api/meat/Environment.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem * .dir-locals.el: Added for project-local Emacs settings 2014-05-10 Dirk Eddelbuettel * R/Attributes.R (compileAttributes): Read Imports: as well 2014-05-07 Kevin Ushey * R/Attributes.R (.plugins[["cpp11"]]): Set USE_CXX1X to more reasonable non-empty value 2014-05-06 Kevin Ushey * R/Attributes.R (.plugins[["cpp11"]]): Set USE_CXX1X to non-empty value 2014-04-30 Dirk Eddelbuettel * R/Attributes.R: Add plugins for C++0x and C++1y 2014-04-30 JJ Allaire * R/Attributes.R: Use USE_CXX1X for cpp11 plugin when R >= 3.1 2014-04-02 Dirk Eddelbuettel * tests/doRUnit.R: Better RUnit error report with thanks to Murray 2014-03-18 JJ Allaire * man/cppFunction.Rd: Correct package header file example to use .h 2014-03-14 Dirk Eddelbuettel * inst/include/Rcpp/DataFrame.h: Add missing return in Impl method 2014-03-13 Dirk Eddelbuettel * DESCRIPTION: Release 0.11.1 * inst/NEWS.Rd: Release 0.11.1 * inst/include/Rcpp/config.h: Release 0.11.1 * debian/*: Similarly updated for new release to Debian 2014-03-09 Kevin Ushey * inst/include/Rcpp/vector/const_string_proxy.h: Workaround for issue with constructing proxies from CHARSXPs 2014-03-08 Kevin Ushey * inst/include/Rcpp/proxy/proxy.h: Make sure proxies know about the const char* wrap shortcut 2014-03-08 Dirk Eddelbuettel * inst/include/Rcpp/proxy/Binding.h: Remove spurious ';' [g++ -pedantic] * inst/include/Rcpp/proxy/ProtectedProxy.h: Idem * inst/include/Rcpp/proxy/TagProxy.h: Idem * inst/include/Rcpp/proxy/AttributeProxy.h: Idem 2014-03-05 Kevin Ushey * inst/include/Rcpp/proxy/FieldProxy.h: bandaid for protection issue in operator= of FieldProxy * R/unit.tests.R: modify Rcpp:::test so we can run tests with gctorture(TRUE) 2014-03-03 Kevin Ushey * inst/include/Rcpp/proxy/SlotProxy.h: Add missing const_SlotProxy ctor definition 2014-02-24 Kevin Ushey * R/Rcpp.package.skeleton.R: make sure we add loadModule to NAMESPACE when module is TRUE 2014-02-23 Kevin Ushey * inst/include/Rcpp/DataFrame.h: better nrows behavior 2014-02-17 Romain Francois * inst/include/Rcpp/traits/un_pointer.h: fix bug in un_pointer for object 2014-02-17 Kevin Ushey * src/attributes.cpp: Fix attributes behavior with ::create, and also add an option for a default constructor (e.g. NumericVector v = NumericVector(10)) gives a default value of 'numeric(10)' at the R level). Also make NAs keep their type when exposed to R. 2014-02-16 JJ Allaire * src/attributes.cpp Replace (incorrect) call to Rcpp::internal::jumpToTop with Rf_onintr 2014-02-07 Kevin Ushey * inst/include/Rcpp/Reference.h: Add default ctor 2014-02-03 Kevin Ushey * inst/include/Rcpp/vector/Vector.h: Enable conversion from Rcpp vectors to RObject 2014-02-02 Dirk Eddelbuettel * DESCRIPTION: Release 0.11.0 * inst/NEWS.Rd: Release 0.11.0 * inst/include/Rcpp/config.h: Release 0.11.0 * debian/*: Similarly updated for new release to Debian 2014-02-02 JJ Allaire * R/Attributes.R: Use placeholder for .Call to avoid warning 2014-02-01 Dirk Eddelbuettel * tests/doRUnit.R: Simplified following pattern in RProtoBuf * vignettes/Rcpp-unitTests.Rnw: Remove a now superfluous global var * vignettes/Rcpp.bib: Updated references to current packages 2014-02-01 JJ Allaire * R/Attributes.R: Embedded R code chunks in sourceCpp can now be disabled 2014-01-31 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Render code with background boxen * vignettes/Rcpp-package.Rnw: Idem * vignettes/Rcpp-modules.Rnw: Idem * vignettes/Rcpp-extending.Rnw: Idem * vignettes/Rcpp-sugar.Rnw: Idem * vignettes/Rcpp-attributes.Rnw: Switched to highlight driver * inst/include/Rcpp/Benchmark/Timer.h: Reverted back to using iterators via use of anonymous namespace for accessors * inst/announce/ANNOUNCE-0.11.0.txt: Updated 2014-01-31 Dirk Eddelbuettel * man/Rcpp.package.skeleton.Rd: Also updated 2014-01-31 JJ Allaire * R/Attributes.R: Embedded R code chunks in sourceCpp are now executed within the working directory of the C++ source file. 2014-01-30 Dirk Eddelbuettel * vignettes/Rcpp-package.Rnw: Updates for upcoming release 2014-01-28 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Some updates for upcoming release 2014-01-25 Dirk Eddelbuettel * inst/include/Rcpp/Benchmark/Timer.h: Simplified -- Rcpp Gallery example using it was not building any longer under g++ 2014-01-23 Dirk Eddelbuettel * inst/announce/ANNOUNCE-0.11.0.txt: Added for next release 2014-01-21 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R: Update skeleton package to add proper Imports: to DESCRIPTION, and importFrom() to NAMESPACE 2014-01-19 Kevin Ushey * inst/include/Rcpp/api/meat/Vector.h: Add missing UNPROTECT in push_back_name__impl 2014-01-18 Kevin Ushey * inst/unitTests/runit.S4.R: Add a test for ctor from slot proxy * inst/unitTests/cpp/S4.cpp: Add a test for ctor from slot proxy * inst/include/Rcpp/vector/Vector.h: Add missing r_cast to vector ctor from proxy 2014-01-18 JJ Allaire * R/Attributes.R: More restrictive matching of C++ file extensions for compileAttributes. 2014-01-18 Kevin Ushey * inst/unitTests/cpp/Matrix.cpp: Add unit test * inst/unitTests/runit.Matrix.R: Add unit test * inst/include/Rcpp/api/meat/Matrix.h: Bug fix in operator= 2014-01-17 Dirk Eddelbuettel * R/RcppLdpath.R (RcppCxxFlags): Restore function to supply values for include files for packages not yet converted to LinkingTo: 2014-01-16 JJ Allaire * inst/include/Rcpp/macros/macros.h: Use Rf_onintr rather than non-public Rf_jump_to_toplevel * inst/include/Rcpp/DateVector.h: Fix GreedyVector compilation error * inst/include/Rcpp/DatetimeVector.h: Fix GreedyVector compilation error 2014-01-15 Dirk Eddelbuettel * inst/include/Rcpp/exceptions.h: Move stop() into Rcpp namespace 2014-01-03 JJ Allaire * .gitignore: Added src/, *.Rproj, and .Rproj.user * inst/include/Rcpp/Interrupt.h: New checkUserInterrupt function that provides a C++ friendly implementation of R_CheckUserInterrupt * inst/include/RcppCommon.h: Include Rcpp/Interrupts.h * inst/include/macros/macros.h: Check for interrupts in END_RCPP * src/attributes.cpp: Handle interrupted-error in attribute function envelope. 2013-12-31 Dirk Eddelbuettel * vignettes/Rcpp.bib: Updated CRAN package references 2013-12-20 Kevin Ushey * inst/include/Rcpp/sugar/tools/mapcompare.h: Use a union for type punning, to avoid compiler warning on aliasing. Also switch to uint64_t to enforce 64bit comparison. * inst/include/Rcpp/RObject.h: Add missing *this return for RObject_impl::operator= 2013-12-20 Dirk Eddelbuettel * inst/include/Rcpp/RObject.h: Applied fix by Kevin Ushey (#88) * inst/include/Rcpp/vector/Vector.h: Ditto (#89) 2013-12-01 Kevin Ushey * R/Rcpp.package.skeleton.R: Fixed bug relating to user-supplied functions in 'list' argument * inst/unitTests/runit.Rcpp.package.skeleton.R: Added unit tests 2013-11-30 Dirk Eddelbuettel * vignettes/Rcpp-FAQ.Rnw: Updated and corrected in several spots 2013-11-22 Dirk Eddelbuettel * inst/include/Rcpp/stats/nt.h: Correct expansion of (d|q|p)nt() * inst/unitTests/runit.stats.R: Added unit tests for t dist with ncp * inst/unitTests/cpp/stats.cpp: C++ side of expamded unit tests 2013-11-05 Dirk Eddelbuettel * .travis.yml: Added to support continuous integration on github 2013-10-28 Romain Francois * include/Rcpp/protection/Armor.h : Armor::operator SEXP has to be const for it to work properly with wrap. 2013-10-27 Dirk Eddelbuettel * DESCRIPTION: Release 0.10.6 * inst/NEWS.Rd: Release 0.10.6 * inst/include/Rcpp/config.h: Release 0.10.5 * debian/*: Similarly updated for new release to Debian 2013-10-17 JJ Allaire * R/Attributes.R: sourceCpp now correctly binds to Rtools 3.0 and 3.1 2013-10-16 Dirk Eddelbuettel * R/Rcpp.package.skeleton.R (Rcpp.package.skeleton): Deprecate namespace argument which package.skeleton() no longer uses * man/Rcpp.package.skeleton.Rd: Updated documentation accordingly 2013-10-16 Romain Francois * include/Rcpp/api/meat/is.h : added missing implementation for is and is 2013-10-14 Romain Francois * inst/include/Rcpp/protection/protection.h: added Shield/Shelter/Armor * DESCRIPTION: bump to version 0.10.5.3 2013-10-12 Dirk Eddelbuettel * DESCRIPTION (Depends): Rolled Depends: on R to "R (>= 3.0.0)" as required by the vignette building code (with thanks to Uwe Ligges) 2013-10-08 Dirk Eddelbuettel * NAMESPACE: Export LdFlags as well as RcppLdFlags * man/RcppLdFlags.Rd: Updated 2013-10-06 John M Chambers * R/exposeClass.R: avoid warning from unclosed file() 2013-10-06 John M Chambers * NAMESPACE: change classModule to exposeClass * R/classModule.R: delete * man/classModule.Rd: delete * R/exposeClass.R: add * man/exposeClass.Rd: add * man/setRcppClass.Rd: update, clarify, recommend exposeClass() 2013-10-03 John M Chambers * R/classModule.R: new function to write module file for class * man/classModule.Rd: documentation for new function classModule() * NAMESPACE: export classModule * R/loadModule.R: clean up an error message * R/RcppClass.R: defaults for module consistent w. classModule() * man/setRcppClass.Rd: add defaults, explain need for saveAs 2013-10-02 Dirk Eddelbuettel * inst/include/Rcpp/traits/is_na.h: More fixes thanks to Thomas Tse 2013-10-01 Dirk Eddelbuettel * inst/include/Rcpp/api/meat/is.h: Applied patch by Thomas Tse to provide missing Character(Vector|Matrix) * DESCRIPTION: Bump to development release 0.10.5.1 2013-09-28 Dirk Eddelbuettel * DESCRIPTION: Release 0.10.5 * inst/NEWS.Rd: Release 0.10.5 * inst/include/Rcpp/config.h: Release 0.10.5 * debian/*: Similarly updated for new release to Debian * vignettes/Rcpp-unitTests.Rnw: Switched to Charter font just like the other eight vignettes 2013-09-28 Romain Francois * include/Rcpp/module/Module_generated_CppMethod.h : more code bloat to handle flexible semantics for passing parameters in methods * include/Rcpp/module/Module_generated_Pointer_CppMethod.h : same * inst/unitTests/cpp/Module.cpp: testing the above * unitTests/runit.Module.R: testing 2013-09-27 Dirk Eddelbuettel * vignettes/Rcpp-unitTests.Rnw: Re-activated vignette * DESCRIPTION: Version number bumped to 0.10.4.6 2013-09-27 Romain Francois * include/Rcpp/module/Module_generated_CppFunction.h : regenerated to use input_parameter traits for more flexible parameter passing strategy * unitTests/cpp/Module.cpp : more testing * unitTests/runit.Module.R : more testing 2013-09-22 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/diff.h: Declare set_previous const and add a missing traits:: prefix before is_na * inst/unitTests/cpp/sugar.cpp: Unit test for diff() of int. vector * inst/unitTests/runit.sugar.R: Invoke new test 2013-09-21 Dirk Eddelbuettel * vignettes/Rcpp-modules.Rnw: Remove vignette-local compilations which again caused problems for the Windows builds at R-Forge and win-builder. Unit tests comprise the same functionality and pass. * vignettes/Rcpp-attributes.Rnw: Refresh look by using Bitstream Charter, and microtype package (cf http://www.khirevich.com/latex) * vignettes/Rcpp-extending.Rnw: Idem * vignettes/Rcpp-FAQ.Rnw: Idem * vignettes/Rcpp-modules.Rnw: Idem * vignettes/Rcpp-package.Rnw: Idem * vignettes/Rcpp-quickref.Rnw: Idem * vignettes/Rcpp-sugar.Rnw: Idem 2013-09-20 Dirk Eddelbuettel * R/Module.R: More ':::' cleanups to make R CMD check happy * R/RcppClass.R: Ditto * NAMESPACE: Some new exports related to this * man/setRcppClass.Rd: Document loadRcppClass() * man/Rcpp-internal.Rd: Added in order to document cpp_object_initializer() and cpp_object_dummy() 2013-09-19 Dirk Eddelbuettel * inst/include/Rcpp/longlong.h: Unbreak long long by making it (as before) conditional on g++ (or clang) as well as C++11. The condition can be OR'ed with another suitably-defined variable, but the default has to be off as CRAN compliance has to remain the standard 2013-09-19 Romain Francois * include/Rcpp/longlong.h: isolate all handling of long long in a separate file which we might choose not to include by default * include/Rcpp/traits/r_sexptype_traits.h : unsigned int wrapped as REALSXP long standing feature request from Murray. * R/Attributes.R : Added the helper demangle and sizeof functions * man/demangle.Rd : Documentation for demangle and sizeof * include/Rcpp/platform/compiler.h : less restritive support of long long types. But still behind a test for gcc and a test for the availability of the type, and the __extension__. -pedantic does not warn about it 2013-09-18 JJ Allaire * R/Attributes.R: Don't search the inline package as a fallback when loading plugins for the the Rcpp::plugins attribute 2013-09-18 Romain Francois * vignettes/Rcpp-package.Rnw: Updating the vignette. Setting attributes to TRUE by default. * R/Rcpp.package.skeleton.R: Setting attributes to TRUE by default. This is what we should encourage people to use. * include/Rcpp/as.h: add as specialization * include/Rcpp/sugar/functions/diff.h : rework the implementation of diff so that it works even when we don't know the previous value * unitTests/runit.sugar.R : * unitTests/cpp/sugar.cpp : * include/Rcpp/sugar/functions/range.h : factored out of minmax.h * include/Rcpp/sugar/functions/min.h : factored out of minmax.h * include/Rcpp/sugar/functions/max.h : factored out of minmax.h * TODO : 3 less items 2013-09-17 JJ Allaire * R/Attributes.R: Call inlineCxxPlugin and Rcpp.plugin.maker without qualification rather than with ':::' 2013-09-17 Dirk Eddelbuettel * NAMESPACE: Export RcppLdFlags which is often used to build Rcpp * man/RcppLdFlags.Rd: Added required manual page * R/Attributes.R: Call RcppLdFlags() via '::' instead of ':::' * R/SHLIB.R: Ditto * R/inline.R: Ditto * vignettes/Rcpp-FAQ.Rnw: Add %\VignetteEngine{highlight::highlight} * vignettes/Rcpp-attributes.Rnw: Idem * vignettes/Rcpp-extending.Rnw: Idem * vignettes/Rcpp-modules.Rnw: Idem * vignettes/Rcpp-package.Rnw: Idem * vignettes/Rcpp-quickref.Rnw: Idem * vignettes/Rcpp-sugar.Rnw: Idem * vignettes/Rcpp-package.Rnw: Altered to make use of highlight package; also no longer build embedded demo package (which upsets R CMD check under R-devel) 2013-09-16 JJ Allaire * R/Attributes.R : Remove calls to non-exported functions from the tools package 2013-09-16 Romain Francois * include/Rcpp/internal/Exporter.h : Specific handling of containers (std::vector, std::deque, and std::list so that we use their faster range constructor when we can, and so let the STL optimize how data is copied * include/Rcpp/api/meat/export.h : Implementation of the above * include/Rcpp/vector/Vector.h : added Vector( const char* ) ctor * DESCRIPTION : bump to 0.10.4.5 (for RcppExtras) 2013-09-15 Dirk Eddelbuettel * inst/include/Rcpp/InputParameter.h (Rcpp): Add 'const' case * inst/unitTests/cpp/Vector.cpp: New unit tests for std::vector conversions, using both int and double arguments * inst/unitTests/runit.Vector.R: R complement of these tests 2013-09-15 Romain Francois * include/Rcpp/InputParameter.h : added the traits::input_parameter trait to add another layer of abstration. * include/Rcpp/macros/module.h : taking advantage of input_parameter to specialize how to work with module objects * src/attributes.cpp : using traits::input_parameter instead of InputParameter 2013-09-14 Dirk Eddelbuettel * src/attributes.cpp : Precede closing '>' by space to avoid '>>' * inst/include/Rcpp/platform/compiler.h: Further refine #if test for 'long long' by conditioning __LP64__ on also using clang/llvm * src/attributes.cpp : Precede closing '>' by space to avoid '>>' 2013-09-13 Romain Francois * src/api.cpp : added "long long" to the capabilities function. * include/Rcpp/platform/compiler.h : demangling is definitely available on all mac versions using gcc. No point is testing for OSX version. * include/Rcpp/InputParameter.h : extra layer of abstraction to allow for custom handling of references etc ... used in RcppArmadillo * src/attributes.cpp : using InputParameter * DESCRIPTION: bump to 0.10.4.4 2013-09-12 Romain Francois * include/Rcpp/platform/compiler.h : patch submitted by Murray for better support of long long type. * include/Rcpp/platform/compiler.h : gcc 4.2.1 has tr1/unordered_map and tr1/unordered_set. Previous test was for gcc 4.4.0 for some reason 2013-08-31 Dirk Eddelbuettel * inst/doc/*: Moved all vignettes to vignettes/* * vignettes/*: Minor updates to some vignettes 2013-08-22 Romain Francois * include/Rcpp/traits/is_primitive.h : new trait to identify if a type is primitive, this is a shortcut of using r_type_traits and compare it to r_type_primitive_tag * include/Rcpp/traits/r_type_traits.h : new tag r_type_pair_tag to handle wrapping map where KEY can be converted to String and VALUE can wrap itself * include/Rcpp/internal/wrap.h : handling map and vector where T is a class handled by modules * include/Rcpp/api/meat/wrap.h : implementations to handle map * unitTests/cpp/wrap.cpp : more tests for map with KEY not a string * unitTests/runit.wrap.R : more tests for map with KEY not a string * include/Rcpp/internal/export.h : added export_range__dispatch for the r_type_generic_tag tag. Meaning we can now use as< vector > where T is not a primitive * include/Rcpp/api/meat/export.h : implementation in meat because it needs as 2013-08-01 Romain Francois * unitTests/cpp/wstring.cpp: fix to re-enable wstring test suite. * unitTests/runit.wstring.R: re-enable the wstring test suite. 2013-07-31 Dirk Eddelbuettel * DESCRIPTION: Bump development version to 0.10.4.3 * inst/doc/Makefile: Rejigged pdf builds in another attempt at pleasing whatever runs the builds on r-forge. L'espoir fait vivre. 2013-07-25 Romain Francois * include/Rcpp/sugar/functions/is_na.h : added is_na for DateVector and DatetimeVector * include/Rcpp/Date.h : added is_na method * include/Rcpp/Datetime.h : added is_na method * unitTests/cpp/dates.cpp : removed the ignoreme useless parameters * unitTests/runit.Date.R : idem * src/attributes.cpp: collecting functions in a FunctionMap. Will use this for dispatching 2013-07-24 Romain Francois * include/Rcpp/traits/is_module_object.h: trait class that identifies at compile time if a given type is a type exposed by a module, i.e. if we used the RCPP_EXPOSED_AS macro * include/Rcpp/is.h: able to identify if an object is of a given type exposed by a module (supports references and pointers too). * src/Module.cpp: implementation of is_module_object_internal that checks if an object is of a given typeid, used by is where T is module exposed 2013-07-23 Romain Francois * include/Rcpp/as.h: support as and as where T is a class exposed by modules * include/Rcpp/macros/module.h: idem * include/Rcpp/traits/un_pointer.h: handle the object case * include/Rcpp/traits/r_type_traits.h: adding traits to help the with as and as * unitTests/runit.Module.R: testing as and as * unitTests/cpp/Module.cpp: idem * src/attributes.cpp: take advantage of a more flexible as<>. The Type class gains a full_name() method that shows const-ness and reference-ness 2013-07-17 Romain Francois * include/Rcpp/vector/instantiation.h: added the DoubleVector alias to NumericVector * include/Rcpp/is.h: added is template function 2013-07-11 Dirk Eddelbuettel * R/Attributes.R: Add an OpenMP plugin 2013-07-03 Romain Francois * unitTests/runit.modref.R: using sourceCpp * unitTests/runit.Module.R: using sourceCpp * unitTests/runit.Vector.R: no more uses of inline * unitTests/runTests.R: we don't need inline no more for testing * doc/unitTests/Rcpp-unitTests.R: idem 2013-07-02 Romain Francois * include/Rcpp/vector/Vector.h: fill__dispatch was mispelled (as fill_dispatch) for the non trivial case, so it did not work * unitTests/runit.Matrix.R: using sourceCpp * unitTests/runit.misc.R: using sourceCpp * unitTests/runit.wrap.R: using sourceCpp * unitTests/runit.support.R: using sourceCpp * unitTests/runit.rmath.R: using sourceCpp * unitTests/runit.RObject.R: using sourceCpp * unitTests/runit.stats.R: using sourceCpp * unitTests/runit.XPTr.R: using sourceCpp * unitTests/runit.Vector.R: testing List( int, IntegerVector ) which eventually uses fill__dispatch * include/Rcpp/traits/r_type_traits.h: support for as and as when T is module exposed * include/Rcpp/as.h: as and as when T is module exposed * include/Rcpp/module/Module_generated_CppFunction.h: removed the remove_const_and_reference since as and as is supported * src/attributes.cpp: automatically populating the environment with the content of a module, rather than make the module object available in the environment 2013-07-01 Romain Francois * R/unit.test.R: added helper function Rcpp:::unit_test_setup to avoid some boiler plate code in unit test files. See e.g. runit.Function.R for an example * unitTests/runit.as.R: using sourceCpp * unitTests/runit.Function.R: using sourceCpp * unitTests/runit.DataFrame.R: remove dependency on datasets 2013-06-25 Dirk Eddelbuettel * src/api.cpp: Also test for #defined(__sun) when checking for system lacking a valid backtrace() function for stack traces 2013-06-25 Romain Francois * DESCRIPTION : devel version 0.10.4.1 * src/Module.cpp : bring a simplified version of RCPP_FUNCTION 1 .. 4 * unitTests/runit.macros.R : removed, as RCPP_FUNCTION ... are deprecated * include/Rcpp/macros/preprocessor_generated.h : deprecating RCPP_FUNCTION_... macros 2013-06-24 Dirk Eddelbuettel * inst/include/Rcpp/platform/compiler.h: Note the useful wiki page http://sourceforge.net/p/predef/wiki/Home with #defines for OSs, compilers, libraries and more 2013-06-23 Dirk Eddelbuettel * DESCRIPTION: Release 0.10.4 * inst/NEWS.Rd: Release 0.10.4 * inst/include/Rcpp/config.h: Release 0.10.4 * debian/*: Similarly updated for new release to Debian 2013-06-19 Romain Francois * inst/NEWS.Rd: Document planned depreciation of old RCPP_FUNCION_* macros which are redundant thanks to Rcpp Modules and Rcpp Attributes * include/Rcpp/vector/string_proxy.h : added operator string_proxy::operator==( const string_proxy& ) so that me may compare x[i] and y[i] (x and y being CharacterVector) * include/Rcpp/module/Module_generated_Pointer_CppMethod.h : remove const and reference to OUT type in several places, that was causing problems e.g. on making the Rcpp-modules vignette * include/Rcpp/module/Module_generated_CppMethod.h : idem 2013-06-18 Romain Francois * include/Rcpp/module/Module_generated_CppFunction.h : using BEGIN_RCPP / END_RCPP as suggested by Ben North on Rcpp-devel. This should reduce cross dll exceptions issues on windows. 2013-06-14 Romain Francois * include/Rcpp/stats/random/runif.h : removed unused max variable * include/Rcpp/stats/random/rf.h : removed unused n1 and n2 variables 2013-06-13 Romain Francois * src/Module.cpp: small buglet in macro. Reported on Rcpp-devel 2013-06-12 Dirk Eddelbuettel * inst/doc/Makefile: Force serial build of vignettes in yet another effort to not let R-Forge fail when trying to rebuild them 2013-06-08 Dirk Eddelbuettel * inst/doc/Rcpp.bib: Updated entries * inst/doc/Rcpp-introduction.Rnw: Added pointer to 'Rcpp Attributes' vignette, as well as to 'Rcpp Sugar' and 'Rcpp Modules' vignettes. * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Idem 2013-06-06 Romain Francois * unitTests/cpp/Vector.cpp : more unit tests for erase * unitTests/runit.Vector.R : more unit tests for erase 2013-06-05 Romain Francois * include/Rcpp/api/meat/Vector.h : fixed Vector<>::erase(iterator, iterator) and correct return value of erase * unitTests/cpp/Vector.cpp : added regression test for the above fix * unitTests/runit.Vector.R : added regression test for the above fix * include/Rcpp/module/class.h : removed useless typedef 2013-05-31 Romain Francois * unitTests/runit.sugar.R : new test for is_infinite and is_nan * unitTests/cpp/sugar.cpp : new test for is_infinite and is_nan * include/Rcpp/sugar/functions/is_infinite.h : new function is_infinite * include/Rcpp/traits/is_infinite.h : new function is_infinite * include/Rcpp/sugar/functions/is_nan.h : new function is_nan * include/Rcpp/traits/is_nan.h : new function is_nan 2013-05-30 Romain Francois * include/Rcpp/sugar/functions/all.h : bug fixed for the NA=false case * include/Rcpp/sugar/functions/is_na.h : header * include/Rcpp/sugar/functions/is_finite.h : added sugar is_finite function * include/Rcpp/traits/is_finite.h : added is_finite trait * unitTests/runit.sugar.R : added test for is_finite * unitTests/cpp/S4.cpp : new cpp file to host S4 unit tests * unitTests/runit.S4.R : rework unit tests to use attributes * unitTests/runit.Reference.R : unit tests for Rcpp::Reference * unitTests/cpp/Reference.cpp : unit tests c++ code 2013-05-26 Dirk Eddelbuettel * src/api.cpp: Minor tweak for internal formatting 2013-05-24 J.J. Allaire * R/Attributes.R: Disallow compilation for files that don't have extensions supported by R CMD SHLIB 2013-05-21 J.J. Allaire * R/Attributes.R: Lookup plugins in inline package if they aren't found within the Rcpp package * man/pluginsAttribute.Rd: Documentation updates. 2013-05-17 J.J. Allaire * src/attributes.cpp: prevent gc problems with RNGScope destructor in attributes generated functions; don't include package header file in generated cpp exports file * src/api.cpp: use unsigned long for RNG scope counter 2013-04-28 Dirk Eddelbuettel * src/api.cpp (Rcpp): No longer use Rd_format(Real|Complex) which is a very verboten R internal; formatting to string is now very bare bones 2013-04-27 Dirk Eddelbuettel * src/Makevars: Improved use as well as a new possible overrride of /usr/bin/install_name_tool on OS X, once again contributed by Simon 2013-04-16 Romain Francois * include/Rcpp/sugar/functions/na_omit.h : new function na_omit to remove missing values from a vector. * src/attributes.cpp : portability fix (from Martyn Plummer) * include/Rcpp/api/meat/Vector.h : portability fix (from Martyn Plummer) 2013-04-14 Romain Francois * include/Rcpp/traits/is_na.h: complex version did not work. added default for VECSXP and EXPRSXP versions 2013-04-02 Dirk Eddelbuettel * src/Date.cpp: Corrected operator-() for Date and Datetime objects to behave more inline with C++ standard * inst/include/Rcpp/Date.h: operator-() for Dates now returns a double as the date itself is fractional double since epoch * inst/unitTests/cpp/dates.cpp: New file with C++ portion of tests factored out from R unit test file * inst/unitTests/runit.Date.R: Rewritten for use with new C++ tests 2013-04-02 Romain Francois * include/Rcpp/generated/DataFrame_generated.h : DateFrame::create uses List::create and then feeds to the DataFrame constructor, which seems to work better than the previous approach of calling back to the data.frame function in R * include/Rcpp/DataFrame.h : private function from_list, to help the new implementation of DataFrame::create * src/api.cpp : impl of DataFrame::from_list 2013-03-31 Dirk Eddelbuettel * debian/control (Build-Depends): Modified for Debian-only rebuilds under (rc version of upcoming) R 3.0.0 release * debian/changelog: Entry for Debian build 0.10.3-2 2013-03-29 Dirk Eddelbuettel * src/api.cpp (Rcpp): Re-enable coerce_to_string<>() for real and complex types with Poor Man's Versions (TM) of Rf_EncodeReal and Rf_EncodeComplex which the Powers That Be disallow from being used 2013-03-27 Romain Francois * include/Rcpp/vector/MatrixRow.h : removed unintended printed messaged (reported on Rcpp-devel by Michaeal Love) 2013-03-23 Dirk Eddelbuettel * DESCRIPTION: Release 0.10.3 * inst/NEWS.Rd: Release 0.10.3 * inst/include/Rcpp/config.h: Release 0.10.3 * debian/*: Similarly updated for new release to Debian 2013-03-21 Dirk Eddelbuettel * inst/unitTests/runit.wstring.R (test.as_vector_wstring): replace the "€" symbol with its unicode equivalent "\u20ac" 2013-03-20 Dirk Eddelbuettel * inst/doc/Rcpp.bib: Updated versions for several CRAN packages * inst/CITATION: Add information about forthcoming book 2013-03-20 Romain Francois * include/Rcpp/traits/is_wide_string.h : fixes to re-enable wrap( vector ) and wrap( vector ), needed to support package httpuv * include/Rcpp/internal/wrap.h : same 2013-03-19 Dirk Eddelbuettel * inst/include/Rcpp/config.h: Define RCPP_USE_NEW_PRESERVE_RELEASE with default value of 0 to enable/disable new preserve/release code * src/api.cpp: Bracket the new Rcpp object preserve / release code with the new variable RCPP_USE_NEW_PRESERVE_RELEASE and fall back to R behaviour if not set 2013-03-12 Romain Francois * include/Rcpp/Module.h: added virtual destructor to CppProperty 2013-03-08 Dirk Eddelbuettel * inst/include/Rcpp/platform/compiler.h: Improved g++ version detection with thanks to Yan Zhou 2013-02-28 JJ Allaire * src/attributes.cpp: standalone roxygen chunks (e.g. to document a class) are now transposed into RcppExports.R 2013-02-27 JJ Allaire * R/Rcpp.package.skeleton.R: eliminated spurious empty hello world function definition in Rcpp.package.skeleton 2013-02-24 JJ Allaire * R/Attributes.R: add global package include file to RcppExports.cpp if it exists; handle Rcpp module definitions in sourceCpp * src/attributes.cpp: handle Rcpp module definitions in sourceCpp * man/sourceCpp.Rd: documentation updates 2013-02-20 Dirk Eddelbuettel * inst/include/Rcpp/platform/compiler.h: As deteced by Gong-Yi Liao, we need to test for __LONG_LONG_MAX__ (defined in limits.h) and not LONG_LONG_MAX (defined climits which we do not include) 2013-02-19 Romain Francois * src/api.cpp : more debugging * include/RcppCommon.h : move sexp_to_name here. Used in some debugging * include/Rcpp/vector/MatrixRow.h : fix const version of operator[] * include/Rcpp/vector/Vector.h : more debugging * include/Rcpp/internal/wrap.h : more debugging. more dispatch. 2013-02-18 Romain Francois * include/Rcpp/vector/string_proxy.h : only declare operator+= * include/Rcpp/String.h : define string_proxy::operator+=, now that String is defined. 2013-02-15 JJ Allaire * R/Attributes.R: Merge existing values of build related environment variables for sourceCpp 2013-02-12 Romain Francois * src/api.cpp : More careful about RCPP_PROTECTION_STACK init 2013-02-08 Romain Francois * include/Rcpp/as.h: re-enable as(CharacterVector[int]) 2013-02-07 Dirk Eddelbuettel * inst/THANKS: Adding Ben North for the help / bug report on iterators 2013-02-05 Romain Francois * include/Rcpp/vector/string_proxy.h : more wstring support * include/Rcpp/XPtr.h : more debugging. removed delete_finalizer which is no longer used 2013-02-05 JJ Allaire * src/attributes.cpp : ensure that line comments invalidate block comments when parsing for attributes 2013-02-04 Romain Francois * include/Rcpp/traits/r_type_traits.h : make the r_type_pairstring_string_tag tag more general, handling wstring as well as string * include/Rcpp/internal/wrap.h : using make_charsexp, a more generic version of charsexp_from_wstring. * include/Rcpp/as.h : more support fot wstring * include/Rcpp/internal/wrap.h : rework the support of wstring * include/Rcpp/internal/export.h : added as_string_elt to rework the support of wstring * include/Rcpp/traits/char_type.h : new trait to help the wstring support * include/Rcpp/String.h : added some support for wstring * include/Rcpp/vector/string_proxy.h : adapt to add wstring support * unitTests/runit.wstring.R : unit tests for wstring support * unitTests/cpp/wstring.cpp : unit tests for wstring support 2013-02-03 Romain Francois * include/Rcpp/traits/wrap_type_traits.h : support for wrap( wstring ) * include/Rcpp/internal/export.h : exporting wstring and containers of wstring * include/Rcpp/internal/wrap.h : support for wrap( wstring ) and containers of wstring * include/RcppCommon.h : definition of charsexp_from_wstring * src/api.cpp: implementation of charsexp_from_wstring 2013-02-02 Romain Francois * include/Rcpp/vector/MatrixRow.h: correct operator++(int) and operator--(int) * include/Rcpp/internal/Proxy_Iterator.h: correct operators ++ and -- * include/Rcpp/sugar/Range.h: correct operators ++ and -- * include/Rcpp/sugar/tools/iterator.h: correct operators ++ and -- * include/Rcpp/vector/MatrixBase.h : correct operators ++ and -- * include/Rcpp/vector/VectorBase.h : correct operators ++ and -- * unitTests/cpp/Vector.cpp: new unit tests * unitTests/runit.Vector.R: new unit tests * src/api.cpp: comment dropTrailing0 which is not used anymore * include/Rcpp/as.h: support for as * include/Rcpp/internal/export.h: more support for wstring 2013-01-15 Dirk Eddelbuettel * src/api.cpp (Rcpp): Commented-out coerce_to_string() for real and complex arguments as R-devel (as of today) dislikes use of non-API functions Rf_EncodeComplex’, ‘Rf_EncodeReal’, ‘Rf_formatComplex’ * .Rbuildignore: Added inst/include/Rcpp/preprocessor and sugar/functions/impl which are currently empty directories * src/Timer.cpp (Rcpp): Avoid a 'long long' warning from a const 2014-01-15 JJ Allaire * R/Attributes.R: don't add source directory as an include path for sourceCpp; fix duplicate inclusion of Rcpp directory * R/RcppLdpath.R: don't quote paths on windows 2014-01-14 JJ Allaire * DESCRIPTION: bump version to 0.10.2.3 * R/Attributes.R: handle build paths with spaces on windows * R/RcppLdpath.R: handle build paths with spaces on windows * R/tools.R: handle build paths with spaces on windows * src/Timer.cpp: fix OSX build (remove __MACH__ define check) * R/: set svn eol-style native for source files * src/: set svn eol-style native for source files * inst/include/: set svn eol-style native for source files 2014-01-13 JJ Allaire * R/Attributes.R: use plugin includes in cppFunction; stop with explicit error on Windows then the Rcpl libPath or sourceCpp target file contains spaces in it's path; add source file directory as an include path for sourceCpp; special handling for sourceCpp include paths on windows * man/pluginsAttribute.Rd: clarify which fields of plugin are used by sourceCpp 2014-01-12 JJ Allaire * DESCRIPTION: bump version to 0.10.2.2 * NAMESPACE: add registerPlugin function * R/Attributes.R: add registerPlugin function; add plugins parameter to cppFunction * man/cppFunction.Rd: documentation updates * man/pluginsAttribute.Rd: documentation updates * man/registerPlugin: documentation updates 2014-01-11 JJ Allaire * R/Attributes.R: initial support for Rcpp::plugins attribute; add built-in cpp11 plugin * src/attributes.cpp: initial support for Rcpp::plugins attribute 2014-01-04 JJ Allaire * R/Attributes.R: null check on pkginfo depends field 2013-01-02 Dirk Eddelbuettel * src/Timer.cpp (Rcpp): Applied refinement of previously applied patch re *BSD builds, see http://bugs.debian.org/697032 for more 2012-12-30 Dirk Eddelbuettel * src/Timer.cpp (Rcpp): Added defined() tests for more *BSD family members as the build also failed with the FreeBSD Kernel on Debian 2012-12-27 Dirk Eddelbuettel * src/Timer.cpp (Rcpp): Applied patch kindly supplied by Rainer Hurling to support compilation on FreeBSD 2012-12-26 JJ Allaire * R/Attributes.R: return invisibly from void functions * src/attributes.cpp: return invisibly from void functions 2012-12-21 Romain Francois * NAMESPACE : remove C++ObjectS3 and C++ClassRepresentation classes * R/00_classes.R: remove unused S4 classes * src/internal.h: added Rcpp_PreserveObject, Rcpp_ReleaseObject and Rcpp_ReplaceObject as replacements to R_ versions. The back end of the Rcpp_ version is a list (generic vector) instead of a linked list and is faster * src/Module.cpp: more debugging * src/barrier.cpp: added get_Rcpp_protection_stack used in the new stack system for protecting/releasing objects in Rcpp * src/api.cpp: implemetation of Rcpp_PreserveObject, Rcpp_ReleaseObject and Rcpp_ReplaceObject. RObject::setSEXP now uses the new system. The RObject(SEXP) constructor now directly uses Rcpp_PreserveObject More debugging for the RObject class Changes in api classes to better use the new protection system * unitTests/cpp/language.cpp: hosting unit test in sourceCpp form * unitTests/runit.Language.R: update unit tests * unitTests/runit.Module.client.package.R: remove code that has been commented for ages * include/Rcpp/DottedPair.h: better use of the RObject constructor * include/Rcpp/vector/Vector.h: better use of the RObject constructor * include/Rcpp/vector/Matrix.h: Using update_matrix instead of the virtual update which has been removed. * include/Rcpp/Module.h : more careful about types and constructors * include/Rcpp/XPtr.h: more debugging * include/Rcpp/macros/debug.h: more debugging macros * include/Rcpp/module/class_Base.h: using classes instead of SEXP * include/Rcpp/module/class.h: using classes instead of SEXP * include/Rcpp/generated/Language__ctors.h : using update_language_object instead of the virtual update which has been removed. * include/Rcpp/api/meat/Vector.h : using update_vector instead of the virtual update that has been removed, more debugging * include/Rcpp/api/meat/Matrix.h : more debugging, using update_matrix instead of the virtual update which has been removed * include/Rcpp/Language.h : added update_language_object to replace update which was virtual * include/Rcpp/RObject.h : only keep declarations here 2012-12-21 Dirk Eddelbuettel * DESCRIPTION: Release 0.10.2 * inst/NEWS.Rd: Release 0.10.2 * inst/include/Rcpp/config.h: Release 0.10.2 * debian/*: Similarly updated for new release to Debian * inst/doc/unitTests/Rcpp-unitTests.R: added one more variable so that unitTest vignette can be built against new sourceCpp based files 2012-12-15 Romain Francois * include/Rcpp/exceptions.h: added exception_to_r_condition * exceptions.cpp: new implementation of forward_exception_to_r that directly calls stop rather than a function in Rcpp * R/exceptions.R: remove code rendered useless * src/Rcpp_init.c: less exports * src/api.cpp: less going back to the R side 2012-12-14 Romain Francois * include/Rcpp/sugar/functions/clamp.h: clamp was pretty wrong * unitTests/runit.sugar.R: new unit test for clamp * unitTests/cpp/sugar.cpp: new unit test for clamp 2012-12-12 JJ Allaire * src/Attributes.R: always generate new dynlib file for rebuild=TRUE * src/attributes.cpp: set svn:eol-style to native; always generate new dynlib file for rebuild=TRUE; don't declare attributes constant strings extern 2012-12-12 Romain Francois * include/Rcpp/Symbol.h: c_str becomes const and added Symbol::operator==(const char* ) 2012-12-11 JJ Allaire * R/Attributes.R: always print output when shared library is not created * src/attributes.cpp: consolidate attributes into single file * src/Attributes.cpp: consolidate attributes into single file * src/AttributesGen.h: consolidate attributes into single file * src/AttributesGen.cpp: consolidate attributes into single file * src/AttributesParser.h: consolidate attributes into single file * src/AttributesParser.cpp: consolidate attributes into single file * src/AttributesTypes.h: consolidate attributes into single file * src/AttributesUtil.h: consolidate attributes into single file * inst/NEWS.Rd: additional notes on changes to attributes * inst/doc/Rcpp-attributes/Rcpp-attributes.Rnw: update for changes to attributes in 0.10.2 2012-12-11 Romain Francois * include/Rcpp/String.h: missing operator +=( const StringProxy& ) * include/Rcpp/sugar/functions/strings/strings.h : string sugar functions * include/Rcpp/sugar/functions/strings/collapse.h : collapse function, implementing paste( . , collapse = "" ) * include/Rcpp/complex.h: operator==( Rcomplex, Rcomplex ) * src/api.cpp: implementation of operator==(Rcomplex, Rcomplex) * include/Rcpp/vector/Vector.h: added const version of operator[](string) 2012-12-10 JJ Allaire * R/Attributes.R: warn when depends attribute is not matched with required entries in package description; add Rtools to PATH for duration of sourceCpp * src/Attributes.cpp: warn when depends attribute is not matched with required entries in package description * src/AttributesGen.cpp: prune unnecessary includes from RcppExports * src/Timer.cpp: fix timer build issues on windows 2012-12-10 Romain Francois * src/api.cpp: import r_cast.cpp, coerce.cpp, RcppCommon.cpp and debugging.cpp content * include/platform/compiler.h: put here compiler specific deduction things * src/internal.h: new header to host function declarations for routines that are not exported into Rcpp.h * src/Rcpp_init.c: export capabilities (renamed rcpp_capabilities) * include/Rcpp/traits/traits.h: master file for all traits includes * include/Rcpp/macros/macros.h: master file for all macros includes * include/Rcpp/DataFrame.h: just have declaration for DataFrame * include/Rcpp/Benchmark/Timer.h: move it into the Rcpp:: namespace * include/Rcpp/cache.h: clean * include/Rcpp/Reference.h : field was declared const and should not be. added a ConstFieldProxy class for read only use 2012-12-09 Romain Francois * src/api.cpp: merge many .cpp files here to reduce compile time * src/barrier.cpp: merge with cache.cpp to reduce compile time * include/Rcpp/exceptions.h: drop forward_uncaught_exceptions_to_r * src/exceptions.cpp: drop forward_uncaught_exceptions_to_r * src/Date.cpp: merge all Date related files 2012-12-08 Romain Francois * src/Timer.cpp: implementation of Timer * include/Rcpp/Benchmark/Timer.h: internal performance timer, based on the code from the microbenchmark package * include/Rcpp/api/meat/Matrix.h: move more in Matrix meat * src/Date.cpp: import the code from posixt.cpp 2012-12-07 JJ Allaire * src/AttributesGen.cpp: use __ prefix for variables in generated code; add RNGScope for attribute exported functions. 2012-12-07 Romain Francois * src/random.cpp: instantiations of random generators here * include/Rcpp/stats/random/random.h: only have declarations of random generators here. Rework the Generator template so that it inherits RNGScope to provide automatic calls to GetRNGstate and PutRNGstate 2012-12-06 JJ Allaire * R/Attributes.R: revert DOS newlines; use new shared library name for each rebuild in sourceCpp * src/Attributes.cpp: revert DOS newlines; define RCPP_NO_SUGAR; use new shared library name for each rebuild in sourceCpp * src/AttributesGen.cpp: revert DOS newlines; convert 'try-error' to exception for C++ interfaces * src/AttributesGen.h: 'try-error' to exception for C++ interfaces * src/AttributesParser.cpp: revert DOS newlines; define RCPP_NO_SUGAR * src/RcppCommon.cpp: conversion from exeption to 'try-error' * include/Rcpp/exceptions.h: conversion from exeption to 'try-error' * include/Rcpp/preprocessor.h: add END_RCPP_RETURN_ERROR macro to convert exceptions to 'try-error' objects * include/Rcpp/iostream/Rstreambuf.h: revert DOS newlines * DESCRIPTION: bump version to 0.10.1.5 2012-12-06 Dirk Eddelbuettel * src/exceptions.cpp: Added include of cstdlib to compile 2012-12-06 Romain Francois * include/Rcpp/api/meat/Environment.h: meat for Environment * src/exceptions.cpp: include config so that it knows that Rcpp can demangle * unitTests/runit.environments.R: using sourceCpp * src/Environment.cpp: less includes * src/Evaluator.cpp: less includes 2012-12-05 Romain Francois * src/cache.cpp: added get_cache * include/Rcpp/hash/IndexHash.h: use a cached integer vector for the hash table payload. The cache vector increases as needed. * include/Rcpp/iostream/Rostream.h: make Rostream a template * include/Rcpp/iostream/Rstreambuf.h: make Rstreambuf a template * src/AttributesGen.cpp : include exceptions.h which was included implicitely by Rostream.h before * include/Rcpp/macros/debug.h : factor out the debugging macros * include/Rcpp/api/meat/RObject.h : only declare templates that use as and wrap. they are implemented later in the meat directory * include/Rcpp/api/meat/meat.h: directory containing implementations of templates using as and wrap * include/RcppCommon.h: removed unused test_named * src/RcppCommon.cpp: removed unused test_named * src/r_cast.cpp: less includes * src/posixt.cpp: less includes 2012-12-05 JJ Allaire * src/Attributes.R: direct hookup of external ptr in sourceCpp * src/Attributes.cpp: use code generation for compileAttributes; direct hookup of external ptr in sourceCpp * src/AttributesGen.cpp: use code generation for compileAttributes; direct hookup of external ptr in sourceCpp * src/AttributesGen.h: use code generation for compileAttributes; direct hookup of external ptr in sourceCpp * src/Module.cpp: fix typo in GetCppCallable * include/Rcpp/iostream/Rstreambuf.h: add cstdio include * DESCRIPTION: bump version to 0.10.1.4 2012-12-04 Dirk Eddelbuettel * inst/include/Rcpp/hash/hash.h: Added include inttypes.h for intptr_t 2012-12-04 JJ Allaire * R/Attributes.R: use simple code generation for sourceCpp * src/Attributes.cpp: move generators into their own source file; use simple code generation for sourceCpp * src/AttributesGen.cpp: move generators into their own source file; add C++ default argument parsing * src/AttributesGen.h: move generators into their own source file * src/AttributesParser.cpp: move generators into their own source file * src/AttributesParser.h: move generators into their own source file * src/AttributesTypes.h: new header for attributes types * src/AttributesUtil.h: new header for attributes utilities 2012-12-04 Romain Francois * include/Rcpp/hash/hash.h: new implementation of IndexHash, based on Simon's fastmatch package * include/Rcpp/sugar/functions/match.h: more efficient version of match using new IndexHash * include/Rcpp/sugar/functions/unique.h: more efficient version of unique and in using IndexHash * include/Rcpp/sugar/functions/duplicated.h: more efficient version of duplicated and in using IndexHash * include/Rcpp/sugar/functions/self_match.h: more efficient version of self_match and in using IndexHash * include/Rcpp/vector/Vector.h: more efficiently create Vector from sugar expression that are already vectors, i.e. grab the SEXP 2012-12-03 Dirk Eddelbuettel * inst/include/RcppCommon.h: Applied patch kindly contributed by Yan Zhou which provides a number of more refined definition for support of both the C++11 standard and different compilers * inst/include/Rcpp/internal/wrap.h: Idem * inst/include/Rcpp/sugar/sugar.h: Idem * inst/include/Rcpp/traits/comparator_type.h: Idem * inst/include/Rcpp/vector/Vector.h: Idem * inst/unitTests/runit.wrap.R: Idem * src/RcppCommon.cpp: Idem * DESCRIPTION: Increase minor dev. version once more 2012-12-03 JJ Allaire * R/Attributes.R: added function to check whether R development tools are currently installed 2012-12-03 Romain Francois * src/Module.cpp: move BEGIN_RCPP/END_RCPP to Module__invoke * src/coerce.cpp: added coerce_to_string implementations * include/RcppCommon.h : nicer formatting for RCPP_DEBUG_*, now up to RCPP_DEBUG_5 * include/Rcpp/vector/Vector.h: debugging * include/Rcpp/String.h: The String class * include/Rcpp/as.h: support for String * include/Rcpp/vector/converter.h : support for String * include/Rcpp/vector/string_proxy.h: support for String * include/Rcpp/internal/wrap.h : support for String * include/Rcpp/internal/r_coerce.h: support for String * include/Rcpp/sugar/functions/sapply.h: debugging * include/Rcpp/traits/wrap_type_traits.h: support for String * include/Rcpp/traits/r_type_traits.h: support for String * unitTests/cpp/String.cpp : unit tests for String * unitTests/runit.String.R: unit test for String * include/Rcpp/sugar/sets.h: support for String 2012-12-01 Dirk Eddelbuettel * inst/include/RcppCommon.h: Applied patch by Yan Zhou to add support for clang++ with libc++, and Intel's icpc when std=c++11 2012-11-29 Romain Francois * unitTests/runit.DataFrame.R: using sourceCpp * include/Rcpp/vector/Matrix.h: fix yet another const correctness issue 2012-11-27 Dirk Eddelbuettel * inst/include/Rcpp/iostream/Rostream.h: Check before deleting buf 2012-11-26 Dirk Eddelbuettel * DESCRIPTION: Release 0.10.1 * inst/NEWS.Rd: Release 0.10.1 * inst/include/Rcpp/config.h: Release 0.10.1 * debian/*: Similarly updated for new release to Debian * DESCRIPTION: Added paragraph about Rcpp attributes * debian/control: Idem 2012-11-26 Romain Francois * include/Rcpp/Module.h: comment out the unused and unuseable converter overload. * include/Rcpp/sugar/functions/pmin.h: be consistent about how the pmin_op helper struct is defined (always a struct). * include/Rcpp/sugar/functions/pmax.h: same for pmax * include/Rcpp/stats/random/rbeta.h: fixed constructor issue * unitTests/runit.sugar.R: rework to use sourceCpp instead of inline * include/Rcpp/vector/Vector.h: added ctor to deal with SingleLogicalResult * include/Rcpp/vector/Matrix.h: another const correctness fix 2012-11-25 JJ Allaire * R/Attributes.R: use echo = TRUE for sourceCpp R code chunks * src/Module.cpp: BEGIN_RCPP/END_RCPP in InternalFunction_invoke * inst/doc/Rcpp-attributes/Rcpp-attributes.Rnw: add documentation on correct semantics for signaling error conditions 2012-11-24 JJ Allaire * inst/doc/Rcpp-attributes/Rcpp-attributes.Rnw: expand discussion of binary compatibility issues. 2012-11-23 Romain Francois * src/AttributesParser.cpp : attempt to fix build issue on r-forge * include/Rcpp/DataFrame.h: nrows() method * include/Rcpp/vector/RangeIndexer.h: now derives from VectorBase so that we can use it in sugar. 2012-11-22 JJ Allaire * include/exceptions.h: new exception constructor / stop function * src/exceptions.cpp: new exception constructor / stop function * include/RcppCommon.h: new exception constructor / stop function 2012-11-22 Romain Francois * include/Rcpp/iostream.h: use delete rdbuf() as recommended by Martyn Plummer * include/Rcpp/sugar/functions/self_match.h: self_match, giving a functionality similar to match( x, unique(x) ) * src/coerce.cpp: added coercion to STRSXP * include/Rcpp/internal/r_coerce.h : added r_coerce<.,STRPSXP> * include/Rcpp/sugar/functions/table.h: sugar table * include/Rcpp/sugar/functions/duplicated.h: sugar duplicated 2012-11-21 JJ Allaire * R/Rcpp.package.skeleton.R: add 'attributes' and 'cpp_files' parameters to Rcpp.pacakge.skeleton * inst/skeleton/rcpp_hello_world_attributes.cpp: version of hello world that uses attributes * man/Rcpp.package.skeleton.Rd: doc updates * inst/doc/Rcpp-attributes/Rcpp-attributes.Rnw: doc updates * DESCRIPTION: bump version to 0.10.0.3 2012-11-21 Dirk Eddelbuettel * inst/examples/Misc/piBySimulation.r: New simple example using Rcpp attributes in a 'compute pi by simulation in R and C++' exercise * inst/examples/Misc/piSugar.cpp: Corresponding C++ variant 2012-11-21 Romain Francois * include/Rcpp/iostream/Rostream.h: Fix warning given by -Wreorder * include/Rcpp/sugar/functions/mapply/mapply_3.h: more flexible * include/Rcpp/vector/Vector.h: More efficient assign_object, which is used in the assignment operator * include/Rcpp/sugar/functions/clamp.h: added clamp function 2012-11-20 JJ Allaire * src/Attributes.cpp: ensure dynlib cache state is always updated * inst/doc/Rcpp-attributes/Rcpp-attributes.Rnw: elaborate further on exporting C++ interfaces from packages 2012-11-20 Romain Francois * include/Rcpp/iostream/Rostream.h: change order of initiaization in ctor. was making solaris compiler unhappy * include/Rcpp/stats/random/rnorm.h: not using function pointer generators, as this generates (anachronisms) warning on solaris. Also, this version is more efficient since there is no need to dereference the function pointer 2012-11-19 JJ Allaire * src/AttributesParser.h: support for argument default values * src/AttributesParser.cpp: support for argument default values * src/Attributes.cpp: support for argument default values * man/exportAttribute.Rd: documentation updates * man/compileAttributes.Rd: documentation updates * man/sourceCpp.Rd: documentation updates * inst/doc/Rcpp-attributes/Rcpp-attributes.Rnw: add documentation on changes to attributes in 0.10.1 2012-11-18 JJ Allaire * R/Attributes.R: sourceCpp embedded R code; print warning if no export attributes are found in source file * src/AttributesParser.h: sourceCpp embedded R code * src/AttributesParser.cpp: sourceCpp embedded R code; new scheme for mixing user and generated C++ headers * src/Attributes.cpp: sourceCpp embedded R code; include above generated modules * man/sourceCpp.Rd: documentation updates * man/interfacesAttribute.Rd: documentation updates 2012-11-18 Romain Francois * include/Rcpp/vector/converter.h: allow CharacterVector::create( NA_STRING ) * include/Rcpp/sugar/functions/mapply/mapply_2.h: more cases in mapply 2012-11-17 Dirk Eddelbuettel * inst/doc/Rcpp-modules/Rcpp-modules.Rnw: Change free function name 'range' to 'uniformRange' to protect it from getting clobbered by the new sugar function range. 2012-11-17 Romain Francois * include/Rcpp/internal/wrap_end.h: have calls to wrap as late as possible so that they "see" all (potentially user defined) overloads of wrap. * include/Rcpp/internal/SEXP_Iterator.h: directly iterate over SEXP. const iterator for List and ExpressionVector 2012-11-16 Romain Francois * include/Rcpp/vector/Vector.h : added static methods Vector::is_na and Vector::get_na * include/Rcpp/sugar/functions/setdiff.h: initial version of setdiff and intersect * include/Rcpp/vector/MatrixColumn.h: dealing with const-ness * include/Rcpp/vector/MatrixRow.h: dealing with const-ness * include/Rcpp/vector/traits.h: dealing with const-ness * include/Rcpp/vector/proxy.h: dealing with const-ness * include/Rcpp/vector/MatrixBase.h: dealing with const-ness * include/Rcpp/vector/Vector.h: dealing with const-ness 2012-11-15 Romain Francois * include/Rcpp/sugar/logical/SingleLogicalResult.h : apply patch suggested by Karl Millar * R/Attributes.R: new R function areMacrosDefined * man/evalCpp.Rd: documentation update * include/Rcpp/sugar/functions/match.h : generic version of match * include/Rcpp/sugar/tools/iterator.h: help iterator that helps writing match in terms of stl algorithms. * include/Rcpp/vector/Vector.h: class no_init that can be used to create an uninitialized vector. e.g. IntegerVector out = no_init(10) ; * include/Rcpp/sugar/functions/unique.h: sugar version of %in% using unordered_set * include/Rcpp/sugar/functions/minmax.h: min, max, and range 2012-11-14 JJ Allaire * src/Attributes.cpp: create sourceCpp context list using single statement 2012-11-14 Dirk Eddelbuettel * inst/announce/ANNOUNCE-0.10.0.txt: Fix typo spotted by Martin Morgan in announcement mail 2012-11-14 Romain Francois * include/Rcpp/internal/wrap.h: fix for wrap( std::complex ) * include/Rcpp/module/class_Base.h: factored out from Module.h * R/00_classes.R: the C++Class gains the parents slot to hold information about parent classes of the class * src/Module.cpp : The CppClass constructor fills the parents slot of C++Class 2012-11-13 Dirk Eddelbuettel * DESCRIPTION: Release 0.10.0 * inst/NEWS: Release 0.10.0 * inst/include/Rcpp/config.h: Release 0.10.0 * debian/*: Similarly updated for new release to Debian 2012-11-13 Romain Francois * include/Rcpp/as.h: as * include/Rcpp/internal/wrap.h : wrap( enum ) * include/Rcpp/traits/wrap_type_traits.h: trait to help wrap( enum ) * include/Rcpp/traits/r_type_traits.h: trait to help as * include/Rcpp/module/macros.h: macros RCPP_EXPOSED_ENUM to help as/wrap of enums 2012-11-12 Dirk Eddelbuettel * inst/announce/ANNOUNCE-0.10.0.txt: Announcement draft 2012-11-12 JJ Allaire * inst/doc/Rcpp-attributes/*: New vignette 2012-11-12 Romain Francois * include/Rcpp/vector/Vector.h : adding const_iterator and associated begin() and end() methods * include/Rcpp/vector/Matrix.h : idem 2012-11-11 JJ Allaire * src/Attributes.cpp: fully qualify _ in generated code 2012-11-11 Romain Francois * include/Rcpp/iostream/Rstreambuf.h: implementing sync() so that flush works * src/Rstreambuf.cpp: implementation * src/Rostream.cpp : added Rcerr that forwards to REprintf 2012-11-10 JJ Allaire * R/Attributes.R: ensure function definitions are never stale * src/Attributes.cpp: add optional hook for inclusion of package types * examples/Attributes/Export.cpp: example use of Rcpp::export * examples/Attributes/Depends.cpp: example use of Rcpp::depends * examples/Attributes/sourceCpp.R: example use of sourceCpp() * examples/Attributes/cppFunction.R: example use of cppFunction() 2012-11-09 Romain Francois * R/Attributes.R: Passing verbose from evalCpp to cppFunction * include/RcppCommon.h: include instead of * include/Rcpp/vector/CharacterVectorExtractionIterator.h: iterator class to quickly iterate over the content of a CharacterVector. The content that is iterated over is to be considered read-only. 2012-11-08 JJ Allaire * R/Attributes.R: special sourceCpp handling for file within the src directory of a package; use .h as suffix for generated headers * src/Attributes.cpp: add information on arguments to Rcpp module; use inline rather than static linkage for generated C++ shims; generated headers: add header guard and use .h suffix; * man/cppFunction.Rd: update documentation * man/sourceCpp.Rd: update documentation * man/evalCpp.Rd: update documentation * man/exportAttribute.Rd: update documentation * man/interfacesAttribute.Rd: update documentation 2012-11-08 Romain Francois * R/Module.R: Module functions taking no arguments don't get the ellipsis anymore in their formals * src/Module.cpp: passing up the number of arguments of the function * R/Attributes.R: added evalCpp * man/evalCpp.Rd: documentation for evalCpp 2012-11-07 JJ Allaire * R/Attributes.R: derive depends from package LinkingTo; change sourceCpp plugin parameter to depends and respect Rcpp::interfaces generated include files * src/Attributes.cpp: validate exported C++ functions before calling; use static rather than inline for stubs to avoid call-site bloat; improved error message when package hpp already exists; import Rcpp namespace into package shim namespace * src/AttributesParser.h: add signature and isHidden methods * src/AttributesParser.cpp: add signature and isHidden methods * src/exceptions.cpp: add function_not_exported exception * include/Rcpp/exceptions.h: add function_not_exported exception * man/cppFunction.Rd: update documentation * man/sourceCpp.Rd: update documentation * man/compileAttributes.Rd: update documentation * man/dependsAttribute.Rd: update documentation * man/exportAttribute.Rd: update documentation * man/interfacesAttribute.Rd: update documentation 2012-11-07 Romain Francois * src/Language.cpp: Language gains a fast_eval method, without the whole try/catch * src/barrier.cpp: function char_nocheck to avoid the check in using CHAR * include/Rcpp/sugar/functions/unique.h: sugar unique and sort_unique using unordered_set (perhaps we could use it from c++11). 2012-11-06 JJ Allaire * R/Attributes.R: tweak whitespace in verbose mode * src/AttributesParser.h: support for interfaces attribute * src/AttributesParser.cpp: support for interfaces attribute * src/Attributes.cpp: support for interfaces attribute; refactor code generators; use single module for exports; return list of updated files from compileAttributes * src/Module.cpp: add package parameter to GetCppCallable * include/Rcpp/Module.h: add package parameter to GetCppCallable * man/compileAttributes.Rd: documentation updates 2012-11-05 Romain Francois * include/Rcpp/Module.h: added class CppInheritedProperty to handle inherited properties * include/Rcpp/module/class.h: implemented inheritance of properties 2012-11-05 JJ Allaire * R/Attributes.R: use modules for attribute code generation * src/Attributes.cpp: use modules for attribute code generation * src/AttributesParser.h: use modules for attribute code generation * src/AttributesParser.cpp: use modules for attribute code generation 2012-11-04 Dirk Eddelbuettel * tests/doRUnit.R: In "development releases" (such as 0.9.15.5) we now default to setting the required CRAN-test-workaround-kludge "RunAllRcppTests" to "yes" as a default -- but not for actual releases (with versions such as 0.9.15) 2012-11-04 Romain Francois * include/Rcpp/module/CppFunction.h: fixed module bug (virtual function was not defined) 2012-11-03 JJ Allaire * Use CLINK_CPPFLAGS rather than PKG_CXXFLAGS for LinkingTo include directories (identical behavior to inline) 2012-11-03 Romain Francois * include/Rcpp/sugar/functions/which_min.h : sugar which.min * include/Rcpp/sugar/functions/which_max.h : sugar which.max * include/Rcpp/module/Module.h : added get_function_ptr which returns the pointer of the target function as a DL_FUNC 2012-11-02 Dirk Eddelbuettel * inst/unitTests/runit.rmath.R: More tests added 2012-11-02 Romain Francois * include/Rcpp/module/CppFunction.h : factored CppFunction in its own file and added the get_function_ptr virtual method. added documentation * include/Rcpp/module/Module_generated_CppFunction.h: implementation of get_function_ptr in classes that derive CppFunction * src/Module.cpp: s/get_function_ptr/get_function/ * include/Rcpp/module/Module.h : factored out and documented. s/get_function_ptr/get_function/ 2012-11-01 Dirk Eddelbuettel * inst/unitTests/runit.rmath.R: New unit test file added 2012-11-01 JJ Allaire * R/Attributes.R: change 'envir' param to 'env' for consistency with the interface of loadModule * man/sourceCpp.Rd: documentation updates * man/cppFunction.Rd: documentation updates 2012-11-01 Romain Francois * include/Rcpp/sugar/logical/or.h : implementing x | y where x and y are Logical sugar expressions * include/Rcpp/sugar/logical/and.h : implementing x & y where x and y are Logical sugar expressions 2012-10-31 JJ Allaire * R/Attributes.R: add cppFunction for inline-style definitions; change 'local' param to (more clear and explicit) 'envir' param; change 'show.output' param to 'showOutput'; add parameter to onBuild hook to indicate if the source was from a 'code' parameter * src/Attributes.cpp: factored parser into it's own file * src/AttributesParser.h: attributes parser header * src/AttributesParser.cpp: attributes parser implementation * man/sourceCpp.Rd: documentation updates * man/compileAttributes.Rd: documentation updates * man/cppFunction.Rd: documentation for cppFunction * NAMESPACE: export for cppFunction 2012-10-31 Romain Francois * include/Rcpp/module/class.h: factored out of Module.h which started to be too big. class_ gains a derives( "Parent" ) for so that the class inherits method that were exposed by its parent. * include/Rcpp/Module.h: template class CppInheritedMethod for implementing inherited method * src/Module.cpp: get_class_pointer implementation 2012-10-30 Dirk Eddelbuettel * inst/include/Rcpp/Rmath.h: Finalised adding Rmath functions 2012-10-30 JJ Allaire * R/Attributes.R: new functions sourceCpp and compileAttributes that use C++11 style attributes (embedded in comments) to perform automatic generation of boilerplate marshaling code * src/Attributes.cpp: support functions for attribute handling * include/Rcpp/exceptions.h: file io exception classes * man/sourceCpp.Rd: documentation for sourceCpp * man/compileAttributes.Rd: documentation for compileAttributes * man/exportAttriute.Rd: documentation for export attribute * man/dependsAttribute.Rd: documentation for depends attribute * NAMESPACE: exports for sourceCpp and compileAttributes 2012-10-30 Romain Francois * include/Rcpp/as.h: new bare_as to simplify uses of as * include/Rcpp/module/Module_generated_Factory.h: using bare_as * R/Module.R: promoting the show method * src/Attributes.cpp: remove g++ warning (int != size_t) 2012-10-29 Dirk Eddelbuettel * inst/include/Rcpp/Rmath.h: More Rmath functions 2012-10-29 Romain Francois * R/Module.R: Taking care of a check warning * include/Rcpp/module/macros.h: adding RCPP_EXPOSED_CLASS_NODECL * include/Rcpp/Module.h: introducing converter to facilitate conversion between classes. * R/Module.R: Methods registered internally with converter will generate the appropriate "as" S4 method. 2012-10-28 Dirk Eddelbuettel * inst/include/Rcpp/Rmath.h: Beginnings of a namespave 'R' around Rmath functions so that Rcpp users can call the (scalar) functions R::pnorm() which helps with adapting or integrating programs writting outside of Rcpp 2012-10-27 Dirk Eddelbuettel * inst/include/Rcpp/module/macros.h: Add forward declaration of class to macro 'RCPP_EXPOSED_CLASS' 2012-10-25 Romain Francois * include/Rcpp/internal/wrap.h: wrapping module object with the help of the RCPP_EXPOSED_CLASS * include/Rcpp/module/macros.h: improving the macros so that wrap and as are covered * include/Rcpp/traits/wrap_type_traits.h: wrapping module objects * include/Rcpp/module/Module_generated_class_factory.h : factories are alternatives to constructors. For now, we can expose as factories any free function that returns a pointer to the target class * include/Rcpp/module/Module_generated_Factory.h : factories * include/Rcpp/Module.h: exposing factories 2012-10-24 Romain Francois * include/Rcpp/traits/is_pointer.h: traits to identify if a type is a pointer * include/Rcpp/traits/un_pointer.h: traits to remove a pointer * include/Rcpp/module/Module_generated_get_return_type.h : handle pointer return types * include/Rcpp/config.h: define RCPP_HAS_DEMANGLING for MAC OS <= 10.7 (up to Lion) * include/Rcpp/module/macros.h: new file that contains macro to help with modules * include/Rcpp/traits/r_type_traits.h : new tag to allow as where T is some class exposed in a module * include/Rcpp/as.h : implementation of as in that case 2012-10-23 Romain Francois * include/Rcpp/internal/wrap.h: new function module_wrap used internally by modules * include/Rcpp/module/Module_generated_CppMethod.h: using module_wrap and simplified the code (removing 35% of the generated code now rendered useless) * include/Rcpp/module/Module_generated_PointerCppMethod.h: using module_wrap and simplified the code * include/Rcpp/traits/module_wrap_traits.h : new file. helping implementation of module_wrap * R/00_classes.R: C++OverloadedMethods gets the field "nargs" to capture the number of arguments * R/01_show.R: cleanup * R/Module.R: handle the case where a method has no argument. In that case, the ellipsis does not end up in the formals * include/Rcpp/Module.h: exposing nargs in C++OverloadedMethods 2012-10-22 Romain Francois * include/Rcpp/as.h: support for as<> for module objects * include/Rcpp/Module.h: idem * include/Rcpp/traits/r_type_traits.h: idem * src/Module.cpp: idem 2012-10-21 Romain Francois * include/Rcpp/traits/wrap_type_traits.h: support for wrapping module objects * include/Rcpp/internal/wrap.h : idem * include/Rcpp/Module.h: idem 2012-10-13 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.15 * inst/NEWS: Release 0.9.15 * inst/include/Rcpp/config.h: Release 0.9.15 * debian/*: Similarly updated for new release to Debian 2012-10-08 Dirk Eddelbuettel * src/exceptions.cpp: Additional PROTECT for parsing exception messages before returning them to R, from a suggestion by Ben North 2012-10-07 Dirk Eddelbuettel * inst/unitTests/runit.Date.R: Added a few more tests 2012-10-06 Dirk Eddelbuettel * inst/include/Rcpp/Date.h: Dates are now represented as doubles, also added accessor functions for double and retained int * src/Date.cpp: Convert from SEXP to double, added constructor from double and added checks for 'finite' representation before converting to 'struct tm' adding support for NA, NaN and Inf * src/DateVector.cpp: Instantiate Date types as double * src/Datetime.cpp: Also added support for NA, NaN and Inf values * inst/unitTests/runit.Date.R: A few additional tests 2012-10-05 Dirk Eddelbuettel * src/exceptions.cpp: Applied patch by Martin Morgan which untangles the clang includes driven by version, and uses direct tests for presence of the header file * inst/include/RcppCommon.h: No longer define CLANG version meta variables as we can directly include the relevant header 2012-09-30 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.14 * inst/NEWS: Release 0.9.14 * inst/include/Rcpp/config.h: Release 0.9.14 * debian/*: Similarly updated for new release to Debian 2012-09-08 Dirk Eddelbuettel * inst/unitTests/runit.sugarOps.R: More sugar Ops unit tests 2012-09-07 Dirk Eddelbuettel * inst/unitTests/runit.sugarOps.R: (Incomplete) beginnings of new unit test file for sugar operations on vectors and matrices 2012-09-07 Romain Francois * inst/include/Rcpp/sugar/functions/sign.h: Sign gets a SEXP operator 2012-09-03 Dirk Eddelbuettel * inst/include/Rcpp/sugar/functions/math.h: Added new sugar function trunc(), round() and signif() * inst/unitTests/runit.sugar.R: Added unit tests for these 2012-09-01 Dirk Eddelbuettel * inst/doc/Makefile: The 'all' target is now empty to prevent autobuilders such as R-Forge from falling over 2012-07-23 Dirk Eddelbuettel * R/bib.R: Trim the trailing ".bib" from the generated bibtex filename as Windows adds one anyway leading to two and an error 2012-07-21 Dirk Eddelbuettel * inst/include/Rcpp/Module.h (Rcpp): Corrected typo / incomplete reference in finalizer use 2012-07-06 Dirk Eddelbuettel * inst/include/Rcpp/config.h: In order to not attempt to include exception_defines.h if on OS X (as the clang runtime may not have predictable access to g++ headers providing these), do not define RCPP_HAS_DEMANGLING which is used in src/exceptions.cpp 2012-06-28 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.13 * inst/NEWS: Release 0.9.13 * inst/include/Rcpp/config.h: Release 0.9.13 * debian/*: Similarly updated for new release to Debian * tests/doRUnit.R: Updated, added (by default commented-out) setting to enforce all tests to run, added standard copyright headers noting heritage off work by Martin Maechler and Gregor Gorjanc * inst/unitTests/runTests.R: Only check environment variable to run all tests if it is not already set (to cooperate with doRUnit.R) 2012-06-27 Dirk Eddelbuettel * src/Environment.cpp: Default ctor initializes its RObject with R_GlobalEnv; SEXP constructor does not use a default arg as it tests * inst/include/Rcpp/Environment.h: Corresponding change * inst/include/RcppCommon.h: #define(s) for before/after clang++ 3.0 * src/exceptions.cpp: Added support for clang++ (>= 3.0) which (just like g++ 4.6 or later) needs bits/exceptions_defines * inst/unitTests/runit.modref.R: re-activated * inst/unitTests/runit.Module.client.package.R: re-activated core * inst/unitTests/runit.modref.R: Run only if RunAllCppTests var set * inst/unitTests/runit.Module.client.package.R: Idem * inst/unitTests/runit.support.R: Idem * inst/unitTests/runit.rcout.R: Idem * inst/unitTests/runit.environments.R: Idem * inst/unitTests/runit.Language.R: Idem * inst/unitTests/runit.Function.R: Idem 2012-06-23 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.12 * inst/NEWS: Release 0.9.12 * inst/include/Rcpp/config.h: Release 0.9.12 * debian/*: Similarly updated for new release to Debian * src/Environment.cpp: Remove empty constructor which is redundant since fix in rev3592 with default SEXP value of R_GlobalEnv * inst/include/Rcpp/Environment.h: Idem * inst/unitTests/runTests.R (allTests): Command-line flag --allTests sets an environment variable indicating that all tests should run * inst/unitTests/runit.Module.R: Run only if RunAllCppTests var set * inst/unitTests/runit.Module.client.package.R: Idem * inst/unitTests/runit.client.package.R: Idem * inst/unitTests/runit.XPtr.R: Idem * inst/unitTests/runit.macros.R: Idem * inst/doc/unitTests/Rcpp-unitTests.R: Ensure Rcpp-unitTests vignette is built with RunAllCppTests flag set * cleanup: Also clean in inst/unitTests/testRcppClass/src * DESCRIPTION: Set Maintainer: to edd@debian.org as CRAN prefers to receive upload email from the same address the Maintainer field 2012-06-22 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.11 * inst/NEWS: Release 0.9.11 * inst/include/Rcpp/config.h: Release 0.9.11 * debian/*: Similarly updated for new release to Debian * DESCRIPTION: Increased Depends to R (>= 2.15.1) 2012-06-21 Dirk Eddelbuettel * inst/doc/Rcpp-modules/Rcpp-modules.Rnw: Updated to reflect use under R 2.15.1 * inst/skeleton/zzz.R: Idem 2012-06-20 Dirk Eddelbuettel * R/loadRcppModules.R: Use lib.loc= argument on packageDescription() as suggested by Kurt, and fetch libname from enclosing environment * DESCRIPTION: Typo and grammar fixes with thanks to Kurt and Doug 2012-05-25 Dirk Eddelbuettel * inst/skeleton/zzz.R: Added new 'evalqOnLoad()' call for R-devel, currently commented out 2012-05-24 Dirk Eddelbuettel * inst/skeleton/Num.cpp: Added to Rcpp.package.skeleton(); will be added when module=TRUE in call * inst/skeleton/stdVector.cpp: Idem * inst/unitTests/testRcppModule/src/rcpp_module.cpp: added more comments, added copyright header, corrected output of example functions by not escaping "backslash-n" twice * inst/unitTests/testRcppModule/src/stdVector.cpp: added some comments, added copyright header * inst/unitTests/testRcppModule/src/Num.cpp: Idem * inst/unitTests/runit.Module.client.package.R: Added four simple tests for Rcpp Modules * inst/doc/Rcpp-modules/Rcpp-modules.Rnw: Some extensions and clarifications added 2012-05-13 Dirk Eddelbuettel * inst/include/Rcpp/iostream/Rostream.h: Added Rstreambuf.h include as per rcpp-devel discussion with Alexey Stukalov 2012-05-09 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Expanded R CMD SHLIB discussion after suggested changes from SC8ren HC8jsgaard; also expanded compiler section a little mentioning clang/clang++ and icc. 2012-05-02 Dirk Eddelbuettel * src/Environment.cpp: Move one default argument to Environment.h * src/Function.cpp: Move one default argument to Function.h * inst/THANKS: Thanks to Anirban Mukherjee for these two changes 2012-04-28 John M Chambers * R/RcppClass.R: use globalVariables() from R 2.15.1 (with exists() test to no break older versions) to declare C++ fields and methods * inst/unitTests/testRcppClass/R/load.R: test use 2012-04-22 Dirk Eddelbuettel * src/debugging.cpp: Expanded 'if defined()' test to included Cygwin thanks to a patch submitted by Dario Buttari 2012-04-19 Dirk Eddelbuettel * src/Evaluator.cpp: errorOccuredSym never used and commented out 2012-04-18 John M Chambers * R/RcppClass.R: New version of setRcppClass, allowing R classes to extend C++ classes used via Rcpp modules * R/loadModule.R: New function, replaces uses of .onLoad() * man/*: Added/updated corresponding documentation 2012-04-07 Romain Francois * inst/include/Rcpp/vector/Vector.h: bug fix. reported on Rcpp-devel http://comments.gmane.org/gmane.comp.lang.r.rcpp/3292 2012-03-29 Dirk Eddelbuettel * inst/unitTests/runit.Vector.R: unit test for containsElementNamed 2012-03-29 Romain Francois * inst/include/Rcpp/vector/Vector.h: Vector<> gains the containsElementNamed method to test for presence of named element 2012-03-24 Romain Francois * src/cache.cpp: Using a single Rcpp_cache, stored in the Rcpp namespace * src/Evaluator.cpp: Using tryCatch instead of rcpp_tryCatch, no more using .Internal; but still define rcpp_TryCatch for backwards compat. 2012-03-23 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added short subsection on how to test a package from the command-line, expanding a patch by Glenn Lawyer in response to an initial rcpp-devel post by Dirk 2012-02-16 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.10 * inst/NEWS: Release 0.9.10 * inst/include/Rcpp/config.h: Release 0.9.10 * debian/*: Similarly updated for new release to Debian 2012-02-16 Douglas Bates * src/Evaluator.cpp: PROTECT the expr argument to Evaluator::Run. Reorganize code. 2011-12-15 Douglas Bates * src/Evaluator.cpp: Avoid Rf_install inside an R API call 2012-02-12 Dirk Eddelbuettel * R/excections.R: Revert to previous use with .Internal * R/tools.R: Add branch for R 2.15.0 which can use assingInMyNamespace; else still use unlockBinding 2012-02-12 Dirk Eddelbuettel * Rcpp-introduction.Rnw: Small wording fix thanks to Pat Burns 2012-02-06 Romain Francois * R/exceptions.R: one less .Internal call * src/Evaluator.cpp: one less .Internal call 2012-02-03 Romain Francois * inst/include/Rcpp/Extractor.h: remove use of Fast in Extractor * inst/include/Rcpp/sugar/functions/mapply/mapply.h: new sugar function, similar to sapply, but with 2 or 3 (for now) input vectors 2012-02-01 Romain Francois * inst/include/Rcpp/iostream/Rostream.h: no need to include Rcpp.h here * inst/include/RcppCommon.h: include Rostream.h here, instead of ... * inst/include/Rcpp.h: ... here (needed for RcppArmadillo) 2012-01-29 Romain Francois * inst/include/Rcpp/sugar/diff.h: custom implementation of diff for the REALSXP case, skipping unnecessary NA tests 2012-01-24 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: New FAQ entry on passing a single option to g++, based on a rcpp-devel question by Whit Armstrong. 2012-01-15 Romain Francois * inst/include/Rcpp/vector/Vector.h: fixing IntegerVector(int,int), reported by Gregor Kastner on rcpp-devel * inst/unitTests/runit.Vector.R: regression test for the above 2011-12-25 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.9 * inst/NEWS: Release 0.9.9 * inst/include/Rcpp/config.h: Release 0.9.9 * debian/*: Similarly updated for new release to Debian 2011-12-24 Dirk Eddelbuettel * Reverting the 'int64' changes listed below (during the period from Oct-31 to Nov-07) which adversely affect packages using Rcpp We will re-apply the 'int64' changes in a way which should cooperate more easily with 'long' and 'unsigned long' This covered svn revisions 3264 to 3308. * DESCRIPTION: Remove (for now) Depends: on int64 * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Ditto for int64_t example * inst/unitTests/runit.Module.client.package.R: On Windows, deactivate 'test.Module.package' * inst/unitTests/runit.client.package.R: On Windows, deactivate 'test.client.packageA' test 2011-12-23 Dirk Eddelbuettel * inst/unitTests/runTests.R: unit tests output 'fallback' directory changed to '..' and files are now in top-level of $pkg.Rcheck/ 2011-12-21 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.8 * inst/NEWS: Release 0.9.8 * inst/include/Rcpp/config.h: Release 0.9.8 * debian/*: Similarly updated for new release to Debian 2011-12-20 Dirk Eddelbuettel * inst/skeleton/zzz.R (.onLoad): correct order of arguments 2011-12-18 Dirk Eddelbuettel * inst/examples/FastLM/lmArmadillo.R: Link with -llapack when using external Armadillo library (but RcppArmadillo makes all this easier) 2011-12-18 Romain Francois * inst/doc/*: Fixes to various vignettes for new version of highlight 2011-12-16 Douglas Bates * inst/unitTests/runit.stats.R: Correct cut+paste typo in qbinom * inst/include/Rcpp/XPtr.h: Check for XPtr type constructing from SEXP 2011-12-12 John M Chambers * R/RcppClass.R: Added setRcppClass for classes extending C++ classes * man/setRcppClass.Rd: Added corresponding documentation * NAMESPACE: Added corresponding exports entry 2011-11-13 Dirk Eddelbuettel * inst/include/Rcpp/stats/f.h: Correct call to not require ncp parameter * inst/unitTests/runit.stats.R: Add unit tests for pf(), pnf(), pchisq(), pnchisq() and pcauchy() 2011-11-07 Romain Francois * include/Rcpp/internal/wrap.h: implemented wrap_dispatch_importer__impl for int64 and uint64, needed for RProtoBuf * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Add int64_t usage example 2011-11-06 Romain Francois * include/Rcpp/modules/Module_generated_Pointer_method.h: added code to deal with const free "methods", e.g. OUT foo( const Class*, ...) in modules Before const_method could only deal with actual const methods of the class, e.g. OUT Class::foo( ... ) const * include/Rcpp/modules/Module_generated_Pointer_CppMethod.h: idem * include/Rcpp/as.h: deal with as and as * include/Rcpp/internal/export.h : deal with as< some_container > and as< some_container > where some_container is some container that has iterators, e.g. std::vector 2011-10-31 Romain Francois * include/Rcpp/int64/int64_lite.h: handling int64_t and uint64_t types, based on the int64 package * include/Rcpp/internal/wrap.h: new dispatch layers to handle int64_t, uint64_t and containers of these * DESCRIPTION: new depending on int64 2011-10-28 Dirk Eddelbuettel * inst/include/Rcpp/iostream/Rostream.h (Rcpp): Added tentative patch for operator<< also contributed by Jelmer Ypma -- but kept commented out for now 2011-10-25 Dirk Eddelbuettel * src/Rostream.cpp: Patch by Jelmer Ypma which adds a new device 'Rcout' not unlike std::cout but uses Rprintf internally * src/Rstreambuf.cpp: Idem * include/include/Rcpp/iostream/Rostream.h: Idem * include/include/Rcpp/iostream/Rstreambuf.h: Idem * include/include/Rcpp.h: Include new headers * inst/unitTests/runit.rcout.R: Added simple unit test 2011-09-29 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.7 * inst/NEWS: Release 0.9.7 * inst/include/Rcpp/config.h: Release 0.9.7 * debian/*: Similarly updated for new release to Debian * inst/include/Rcpp/sugar/block/SugarBlock_1.h: Apply second path by Martyn Plummer to permit compilation on Solaris * inst/include/Rcpp/sugar/block/SugarBlock_2.h: Idem * inst/include/Rcpp/sugar/block/SugarBlock_3.h: Idem * inst/include/Rcpp/sugar/matrix/outer.h: Idem * inst/include/Rcpp/vector/LazyVector.h: Idem * inst/unitTests/testRcppModule/src/stdVector.cpp: Idem 2011-09-24 Dirk Eddelbuettel * inst/include/Rcpp/Extractor.h: Apply patch by Martyn Plummer to help with compilation on Solaris * inst/include/Rcpp/sugar/block/Vectorized_Math.h: Idem * inst/include/Rcpp/sugar/functions/math.h: Idem * inst/include/Rcpp/sugar/block/SugarBlock_2.h: Also applied path by Martyn Plummer, but with additional #ifdef layer for SunPro Compiler * inst/include/Rcpp/vector/LazyVector.h: Idem 2011-08-26 Douglas Bates * inst/examples/OpenMP/OpenMPandInline.r: Added another variant using import_transform for the Rcpp Vector class. 2011-08-26 Dirk Eddelbuettel * inst/include/*h: Removed exception specifiers in function headers * src/*cpp: Corresponding changes in implementations * inst/examples/OpenMP/OpenMPandInline.r: Added two std::transform() variants as suggested in rcpp-devel email by Davor Cubranic 2011-08-25 Dirk Eddelbuettel * inst/examples/OpenMP/OpenMPandInline.r: Added new example for OpenMP via inline, comparing simple loops with plain Rcpp and sugar 2011-08-23 Dirk Eddelbuettel * inst/examples/Misc/ifelseLooped.r: Added new example based on blog post today, and a StackOverflow ansers---and which shows how Rcpp can accelerate loops that may be difficult to vectorise due to dependencies * inst/examples/Misc/: New directory for small examples regrouping the new example as well as the fibonacci example added in Rcpp 0.9.6 2011-08-17 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added a short section including an example on the issue raised by Murray wherein 64 bit 'long' integer types can be cast with loss to numeric types without error or warning. 2011-07-28 Dirk Eddelbuettel * inst/unitTests/runit.Function.R: new unit test for accessing a non-exported function from a namespace 2011-07-26 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.6 * inst/NEWS: Release 0.9.6 * inst/include/Rcpp/config.h: Release 0.9.6 * debian/*: Similarly updated for new release to Debian 2011-07-24 Dirk Eddelbuettel * inst/examples/Fibonacci/fib.r: New example showing how to compute a Fibonacci sequence using Rcpp and compare it to R and byte-compiled R 2011-07-14 Dirk Eddelbuettel * inst/examples/RcppGibbs/RcppGibbs.R: New example RcppGibbs, extending Sanjog Misra's Rcpp illustration of Darren Wilkinson's comparison of MCMC Gibbs Sampler implementations; * inst/examples/RcppGibbs/timeRNGs.R: added short timing on Normal and Gaussian RNG draws between Rcpp and GSL as R's rgamma() is seen to be significantly slower 2011-07-13 Romain Francois * inst/include/Rcpp/traits/is_eigen_base.h: helper traits to facilitate implementation of the RcppEigen package. The is_eigen_base traits identifies if a class derives from EigenBase using SFINAE * inst/include/Rcpp/internal/wrap.h: new layer of dispatch to help RcppEigen 2011-07-07 Romain Francois * inst/include/Rcpp/XPtr.h: The XPtr class template gains a second template parameter allowing the developper to supply his/her own finalizer instead of the default one that calls delete 2011-07-05 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.5 * inst/NEWS: Release 0.9.5 * inst/include/Rcpp/config.h: Release 0.9.5 * debian/*: Similarly updated for new release to Debian 2011-07-02 Dirk Eddelbuettel * cleanup: Also clean in examples/OpenMP/ 2011-06-09 Dirk Eddelbuettel * inst/skeleton/zzz.R (.onLoad): Force load of methods package before calling loadRcppModules() to make 'R CMD check' happier 2011-06-06 Romain Francois * inst/include/Rcpp/vector/Vector.h : init becomes protected to fix the bug reported by Doug Bates on Rcpp-devel. 2011-05-31 Romain Francois * R/loadRcppModules.R: New argument "direct" in loadRcppModules * R/tools.R: New unexported function forceAssignInNamespace 2011-05-29 Dirk Eddelbuettel * inst/include/Rcpp/stats/random/rlnorm.h: Repaired accidental header guard from 'norm' to 'lnorm' so that the file really gets included, make several calls to standard library 'exp()' explicit as '::exp()' and fixed a cut-and-paste typo 2011-05-24 Dirk Eddelbuettel * inst/include/Rcpp/internal/wrap.h: For arguments of type const char *, wrap now checks for NULL arguments before calling Rf_mkString() * unitTests/runit.wrap.R: Added unit test for this 2011-05-14 Dirk Eddelbuettel * inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: Corrected an error in STL example and added two more STL examples 2011-04-27 Dirk Eddelbuettel * inst/examples/OpenMP/piWithInterrupts.cpp: Beginnings of new contributed example on OpenMP as well as user interrupt handling 2011-04-26 Romain Francois * inst/include/Rcpp/sugar/functions/mean.h: new sugar function: mean * inst/include/Rcpp/sugar/functions/var.h: new sugar function: var * inst/include/Rcpp/sugar/functions/sd.h: new sugar function: sd 2011-04-19 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: New example setting row and column names for matrices 2011-04-16 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: New example using Rcpp.plugin.maker 2011-04-12 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.4 * inst/NEWS: Release 0.9.4 * inst/include/Rcpp/config.h: Release 0.9.4 * debian/*: Similarly updated for new release to Debian 2011-04-12 Romain Francois * inst/unitTests/testRcppModules/src/stdVector.cpp: compiler disambiguation * src/r_cast.cpp: use a callback to R's "as.character" instead of calling Rf_coerceVector, which did not work as expected for factors 2011-04-11 Romain Francois * R/loadRcppModules.R: New R function "loadRcppModules" that looks for the "RcppModules" field in the DESCRIPTION file, loads and populates the modules into the package NAMESPACE * man/loadRcppModules.Rd: documentation * inst/unitTests/testRcppModule: using loadRcppModules 2011-04-11 Dirk Eddelbuettel * inst/man/Rcpp-package.Rd: Added JSS reference in \references{} * inst/doc/*: Added JSS reference to vignettes 2011-04-09 Dirk Eddelbuettel * inst/CITATION: Finalized using JSS data on volume, number, pages 2011-04-07 Dirk Eddelbuettel * inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: Add patch by Christian pointing out need for Rcpp:: namespace qualifier, and hint for Rcpp-FAQ 2011-04-05 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added OS X entry for min. sufficient versions of OS X itself and Xode based on Simon's post to rcpp-devel 2011-04-05 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.3 * inst/NEWS: Release 0.9.3 * inst/include/Rcpp/config.h: Release 0.9.3 * debian/*: Similarly updated for new release to Debian 2011-04-05 Romain Francois * R/01_show.R: set of cosmetic changes to the show method for C++ classes * inst/include/Rcpp/Module.h: fixed module bug by not using singletons of the class_ template 2011-04-03 Dirk Eddelbuettel * inst/doc/Rcpp-introduction.Rnw: Updated to forthcoming JSS paper * inst/CITATION: Added citation() support using forthcoming paper * inst/doc/Makefile: Trying make parallel builds possible by not calling 'clean' in the 'all' target; thanks to Brian Ripley for the heads-up 2011-04-02 Dirk Eddelbuettel * cleanup: Also clean in inst/unitTest/testRcppModule/src/ * inst/include/RcppCommon.h: Define new variable for g++ < 4.6.0 * src/exceptions.cpp: Include up to g++-4.5 only * inst/unitTests/testRcppModule/src/stdVector.cpp: Use #ifdef not #if * inst/include/Rcpp/module/Module_generated_ctor_signature.h: Add a bit of null-op code to suppress a 'unused parameter' warning in the initial (and non-templated) ctor_signature() function 2011-03-21 Dirk Eddelbuettel * inst/unitTests/testRcppModule/src/stdVector.cpp: Protect push_back declaration by #ifdef as it conflicts with -std=c++0x use for g++-4.5 2011-03-17 Dirk Eddelbuettel * inst/include/RcppCommon.h: Condition the typedef for 'long long' of rcpp_long_long_type on the (still experimental) support for C++0x which can be enabled with the non-portable g++ flag '-std=c++0x'; adding a test for C++0x support suppresses a new warning with g++ about long long being part of C++98; thanks to Kurt Hornik for raising this 2011-03-10 Dirk Eddelbuettel * inst/include/Rcpp/grow.h: Applied another patch kindly supplied by Murray which fixes another clang/llvm and C++ conformance issue by re-ordering declarations as unqualified names must be declared before they are used, even when used within templates. 2011-02-28 Dirk Eddelbuettel * inst/doc/Makefile: Call R and Rscript relative to R_HOME/bin 2011-02-23 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.2 * inst/NEWS: Release 0.9.2 * inst/include/Rcpp/config.h: Release 0.9.2 * debian/*: Similarly updated for new release to Debian * inst/include/RcppCommon.h: Apply patch by Alexey Stukalov to enable basic Intel Compiler support without Cxx0x or TR1 features * inst/THANKS: Added some Thank You! to Baptiste, Alexey and Ken * inst/include/Rcpp/Module.h: Minor reworking of module loading macro to get rid of one g++ warning 2011-02-22 Dirk Eddelbuettel * inst/unitTests/runit.Module.client.package.R: Add a test for OS X 10.5.* or older and do not execute the test here as g++ 4.2.1 balks at some of the Rcpp modules code. Thanks to Simon Urbankek for pinning this down and Baptiste Auguie for additonal testing. 2011-02-20 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added RcppArmadillo example 2011-02-19 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added three more setup-related questions in the first section following another rcpp-devel question 2011-02-14 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.1 * inst/NEWS: Release 0.9.1 * inst/include/Rcpp/config.h: Release 0.9.1 * debian/*: Similarly updated for new release to Debian 2011-02-13 Dirk Eddelbuettel * inst/include/Rcpp/Module.h: Cache return of Rf_install("Module") in a static helper function used by the LOAD_RCPP_MODULE macro 2011-02-11 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Added two more examples 2011-02-10 Douglas Bates * inst/include/Rcpp/XPtr.h: Replace calls to EXTPTR_PTR with R_ExternalPtrAddr. The distinction is important when R is compiled with PROTECTCHECK enabled. 2011-02-01 Romain Francois * inst/include/Rcpp/vector/Vector.h: extra PROTECT'ion in several places 2011-01-25 Dirk Eddelbuettel * inst/include/Rcpp/DataFrame_generated.h: Assign Rf_install() result to local SEXP (by modifying generator script creating the file) * inst/include/Rcpp/DataFrame.h: Assign Rf_install() result to local SEXP * inst/include/Rcpp/DottedPair.h: idem * inst/include/Rcpp/grow.h: idem * inst/include/Rcpp/Module.h: idem * inst/include/Rcpp/vector/eval_methods.h: idem * inst/include/Rcpp/vector/Vector.h: idem 2011-01-25 Douglas Bates * src/exceptions.cpp: Assign Rf_install() result to local SEXP * src/Evaluator.cpp: idem * src/Reference.cpp: idem * src/S4.cpp: idem * inst/include/Rcpp/Date.h: Use predefined symbol. 2011-01-22 Dirk Eddelbuettel * src/cache.cpp: Assign Rf_install() result to local SEXP * src/Environment.cpp: idem * src/Evaluator.cpp: idem * src/Function.cpp: idem * src/Function.cpp: idem * src/RObject.cpp: idem * src/Symbol.cpp: idem * inst/doc/Rcpp.bib: Added SoDA (some time ago) 2011-01-13 Douglas Bates * src/Reference.cpp: Protect the value being set in Reference::FieldProxy::set 2011-01-11 Romain Francois * inst/include/Rcpp/vector/string_proxy.h: fix implicit conversion to int, reported by Daniel Sabanes Bove on Rcpp-devel * inst/unitTests/runit.vector.R: unit test for the above fix 2011-01-08 Dirk Eddelbuettel * inst/doc/Rcpp.bib: Updated a number of CRAN versions 2011-01-07 Dirk Eddelbuettel * inst/include/Rcpp/config.h (RCPP_VERSION): Set to 0.9.0, at last. 2011-01-06 Douglas Bates * R/zzz.R (.onLoad): Don't call init_Rcpp_cache here. * src/Rcpp_init.c: Don't register init_Rcpp_cache. It should only be called once and it is called in the C function R_init_Rcpp. * NAMESPACE: Use registered symbols instead of relisting them. Registration allows for checking the number of arguments. 2011-01-04 Dirk Eddelbuettel * src/debugging.cpp: Treat the *BSD flavours like Windows and offer file and line number but not stack trace (for lack of execinfo) * src/Makevars: Replace implicit variable $^ with explicit list 2011-01-02 Dirk Eddelbuettel * inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: Applied patch with additional documentation by Christian Gunning 2010-12-23 Romain Francois * inst/include/Rcpp/RObject.h: New internal class SEXPstack to handle garbage collection. Presumably more efficient than R_PreserveObject and R_ReleaseObject * inst/include/Rcpp/sugar/operators/times.h: More efficient operator* for REALSXP sugar expressions, avoiding unnecessary NA tests. * inst/include/Rcpp/sugar/operators/divides.h: More efficient operator/ for REALSXP sugar expressions, avoiding unnecessary NA tests. * inst/include/Rcpp/sugar/operators/minus.h: More efficient operator- for REALSXP sugar expressions, avoiding unnecessary NA tests. 2010-12-22 Romain Francois * inst/include/Rcpp/sugar/operators/plus.h: More efficient operator+ for REALSXP sugar expressions, avoiding unnecessary NA tests. 2010-12-22 Dirk Eddelbuettel * inst/unitTests/runit.Vector.R: Applied patch by Christian Gunning to add more tests for complex-typed vectors 2010-12-20 Dirk Eddelbuettel * R/inline.R (Rcpp.plugin.maker): Reverse order in PKG_LIBS 2010-12-19 Dirk Eddelbuettel * DESCRIPTION: Release 0.9.0 * debian/*: Similarly updated for new release to Debian 2010-12-18 Dirk Eddelbuettel * inst/announce/ANNOUNCE-0.9.0.txt: Started announcement post * inst/unitTests/runit.Date.R: Added new unit tests for date and datetime from string 2010-12-17 Dirk Eddelbuettel * inst/include/Rcpp/Datetime.h: correct default format to use %OS for fractional seconds and not the popular typo %OS (i.e. ooh, not zero) * src/Datetime.cpp: add missing as.POSIXct() after strptime for constructor from string as we then use the constructor from double * src/Date.cpp: add missing as.Date() after strptime for constructor from string as we then use the constructor from int 2010-12-13 Romain Francois * inst/include/Rcpp/vector/string_proxy.h: List::Proxy did not convert bool correctly, reported on Rcpp-devel by Daniel SabanC)s BovC) 2010-12-12 Romain Francois * R/SHLIB.R: new unexported R function SHLIB, small wrapper around R CMD SHLIB * inst/include/Rcpp/sprintf.h: returning a std::string to avoid leaks 2010-12-10 Dirk Eddelbuettel * inst/include/Rcpp/sprintf.h: Use vsnprintf() instead 2010-12-10 Romain Francois * inst/include/Rcpp/barrier.h: faster versions (crossing the write barrier) for string_elt, etc ...(to be used only internally) * src/barrier.cpp: implementation of the above 2010-12-09 John M Chambers * src/Module.cpp: Rcpp/src/exceptions.cpp, Rcpp/src/Rcpp_init.c, etc. add a not_initialized exception and a dummy_pointer to identify such objects, throw exc. back to R 2010-12-07 Romain Francois * inst/include/Rcpp/vector/matrix.h: Matrix gains a nested ::Sub typedef 2010-12-05 Romain Francois * inst/include/Rcpp/module/Module_generated_class_constructor.h: the default constructor was always considered valid because of the use of &yes instead of &yes_arity<0> * R/Rcpp.package.skeleton.R: Rcpp.package.skeleton( "foo", example_code = FALSE) did not work properly. Rcpp.package.skeleton gains some arguments 2010-12-05 Dirk Eddelbuettel * src/Date.cpp: Add 1900 to tm.year after mktime00() call as we now no longer assume the field is '1900-less' * src/Date.cpp: Define new static const variable baseYear as 1900 and use throughout * inst/unitTests/runit.Date.R (test.Date.getFunctions): Added unit tests for the get* functions of the Date class * R/bib.R (bib): Correct expression for default Rcpp bibtex file 2010-12-04 Dirk Eddelbuettel * inst/include/Rcpp/Date.h: Remove addition of 1900 in getYear() 2010-12-04 Romain Francois * inst/doc/Rcpp-quickref/Rcpp-quickref.Rnw: documentation patch by Christian Gunnning * inst/include/Rcpp/vector/matrix.h: fix SubMatrix. Bug reported by Christian Gunnning on Rcpp-devel * inst/include/Rcpp/vector/SubMatrix.h: factored out of matrix.h * inst/include/Rcpp/sprintf.h: new sprintf template to format strings 2010-12-03 Dirk Eddelbuettel * inst/unitTests/runit.RObject.R: fix 'inherits' test added today * inst/include/Rcpp/module/Module_generated_Constructor.h: Applied patch by Tama Ma for up to seven args in ctor * inst/include/Rcpp/module/Module_generated_class_constructor.h: Idem * inst/include/Rcpp/module/Module_generated_ctor_signature.h: Idem 2010-12-03 Romain Francois * inst/include/Rcpp/RObject.h : new inline method inherits that checks if an object inherits from a given class (wrapper around Rf_inherits) * inst/unitTests/runit.RObject.R: unit test for the above 2010-12-02 Douglas Bates * inst/include/Rcpp/generated/Function__operator.h, inst/include/Rcpp/Function.h: operator() becomes const. 2010-11-29 Romain Francois * inst/include/Rcpp/vector/Vector.h: trying to please suncc after CRAN checks * R/Module.R: protect the module$refClassGenerators <- generators line against the case where there are no classes (triggered a problem with the parser package) 2010-11-27 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.9 * debian/*: Similarly updated for new release to Debian 2010-11-26 Romain Francois * inst/include/Rcpp/vector/Vector.h: List::create( _["foo"] ) sets the SEXP to R_MissingArg, usueful for formal arguments specifications, simpler form than List::create( _["foo"] = R_MissingArg ) * inst/include/Rcpp/macros/unroll.h: helper macro RCPP_UNROLL_LOOP * inst/include/Rcpp/vector/MatrixColumn.h: added MatrixColumn::operator=( MatrixColumn& ) otherwise it gets synthetized by the compiler * inst/include/Rcpp/vector/MatrixRow.h: same for MatrixRow * inst/include/Rcpp/vector/Matrix.h: added Matrix( SubMatrix ) and Matrix::operator=( SubMatrix ) 2010-11-25 Romain Francois * inst/include/Rcpp/module/Module_generated_function.h: new .function with formal argument specification * inst/include/Rcpp/module/Module_generated_CppFunction.h: helper classes for the above * R/Module.R: using the formal argument specification if available * R/populate.R: new R function populate to dump the contents of a module into an environment or a namespace * man/populate.Rd: documentation for populate 2010-11-24 Romain Francois * R/00_classes.R: formals<- method for C++Function that allows to set default arguments, etc .. to a C++ function 2010-11-23 Dirk Eddelbuettel * inst/doc/Makefile: Call Rscript with --vanilla to skip user settings 2010-11-23 Romain Francois * R/00_classes.R: C++Class gains a docstring slot to host self documentation * R/Module.R: calling an exposed C++ more efficiently by using the xp directly rather than traversing the map internally * R/00_classes.R: C++Function gains a docstring slot to host self documentation of the internal function. And a "signature" slot to host the C++ signature of the function * R/01_show.R: updated show( C++Function ) to display the docstring and the signature. updated show( C++Class ) to display the docstring. * inst/include/Rcpp/module/Module_generated_CppFunction.h: self documentation for exposed C++ functions and extraction of the signature * inst/include/Rcpp/module/Module_generated_function.h: idem 2010-11-22 Romain Francois * R/00_classes.R: C++OverloadedMethods gains an "info" class methods, factored out from Module.R * R/01_show.R: more information printed in show( C++Class ) * inst/include/Rcpp/Module/Module_generated_get_signature.h: templates to grab method signatures * inst/include/Rcpp/Module.h: CppMethod gains a signature method that returns the signature of the method. * R/00_classes.R: C++OverloadedMethods gains a "signatures" field that contains the signature of each overload * R/Module.R: registered method gain an automatically generated self description that contains the method(s) signature(s) and the docstring that is declared in .method * inst/include/Rcpp/Module/Module_generated_CppMethod.h: implement signature * inst/include/Rcpp/Module/Module_generated_Pointer_CppMethod.h: idem 2010-11-21 Romain Francois * R/Module.R: internal version of cpp_hasDefaultConstructor * src/Module.cpp: implementation (Class__has_default_constructor) * inst/include/Rcpp/Module.h: support (class_.has_default_constructor) * inst/include/Rcpp/module/Module_generated_class_constructor.h: new interface for exposing constructors, the init_ disappears and the template arguments are directly applied to the .constructor function * inst/include/Rcpp/module/Module_generated_Constructor.h: removed init_* * inst/include/Rcpp/module/Module_generated_method.h: .method gains a docstring argument to allow self documentation of exposed methods * inst/include/Rcpp/module/Module_generated_PointerMethod.h: idem * R/Module.R: grab method docstrings 2010-11-20 John M Chambers * R/Module.R: now checks for the existence of a default constructor for a C++ class and generates a suitable $initialize() method accordingly. 2010-11-20 Romain Francois * inst/include/Rcpp/vector/MatrixRow.h: added missing return *this ; * R/Module.R: dispatch based on void-ness of the methods. For example if all methods are known to be void, etc ... * R/00_classes.R: more information in the C++OverloadedMethods ref class * src/Module.cpp: new .External CppMethod__invoke_void and CppMethod__invoke_notvoid that are used when we know for sure that all overloaded methods are void, or not void * inst/include/Rcpp/Module.h: class_ gains invoke_void and invoke_notvoid to support the changes above 2010-11-18 Douglas Bates * inst/include/Rcpp/module/Module_generated_[class_]Constructor.h: allow up to 6 arguments to .constructor 2010-11-18 Romain Francois * inst/include/Rcpp/Module.h: rework the class_ template to allow overloaded methods * R/00_classes.R: The C++Method class disappears and the C++OverloadedMethods enters. a "C++OverloadedMethods" object points to a set of overloaded C++ methods that all share the same name. * R/Module.R: adapt some of the code to cope with changes above 2010-11-17 Romain Francois * inst/include/Rcpp/sugar/as_vector.h: added the as_vector function that turns a sugar matrix expression into a vector of the appropriate type * inst/include/Rcpp/vector/Matrix.h: new SubMatrix class 2010-11-13 Romain Francois * inst/include/Rcpp/Module.h: expose constructors as the "cpp_constructor" field of "C++ClassRepresentation" and the "constructors" slot of "C++Class" 2010-11-07 Romain Francois * inst/include/Rcpp/sugar/operators/minus.h: fixed Minus_Vector_Primitive * inst/unitTests/runit.sugar.R: new test for the above 2010-11-05 Romain Francois * inst/include/Rcpp/Module.h: exposing multiple constructors in modules * src/Module.cpp: The mangled class name is now "Rcpp_" plus the class name. The previous version used the address of the external pointer to the module, which was not constant. 2010-11-04 Douglas Bates * inst/include/Rcpp/module/Module_generated_Constructor.h: remove redundant 'return's. 2010-11-04 Romain Francois * inst/include/Rcpp/Module.h: experimental way to specify which constructor to use in classes exposed by modules. This is still too restrictive as it only allows one constructor. * inst/include/Rcpp/sugar/block/SugarMath.h: extend the SUGAR_MATH_1 macro so that we can apply functions (e.g. sqrt) directly on SEXP 2010-11-01 Dirk Eddelbuettel * DESCRIPTION (Version): Release 0.8.8 * debian/*: Similarly updated for new release to Debian 2010-10-30 Dirk Eddelbuettel * inst/include/RcppCommon.h: New define IS_GCC_450_OR_LATER * inst/include/Rcpp/Extractor.h: Do not enable Rcpp::Fast if g++ 4.5.0 or later is used -- we need to figure out what upsets it 2010-10-23 Romain Francois * inst/include/Rcpp/vector/MatrixRow.h: Faster row indexing * inst/include/Rcpp/vector/Matrix.h: added use of _ to get columns and rows of a matrix. For example if x is a NumericMatrix, x(_,i) returns the same as x.column(i) and x(i,_) returns the same as x.row(i) * inst/unitTests/runit.Matrix.R: unit tests for the above * inst/include/Rcpp/sugar/functions/sum.h: the sugar version of sum now takes care of missing values correctly * inst/include/Rcpp/sugar/functions/cumsum.h: sugar version of cumsum 2010-10-21 Romain Francois * inst/include/Rcpp/vector/MatrixColumn.h: Fixed indexing bug (mismatch between number of rows and number of columns * inst/unitTests/runit.Matrix.R: test fix above based on the R-help/Rcpp-devel thread: http://article.gmane.org/gmane.comp.lang.r.rcpp/851 * inst/include/Rcpp/vector/MatrixColumn.h: Column gains a operator= taking a sugar expression. Faster indexing (caching the pointer instead of calling nrow many times) * inst/include/Rcpp/vector/Matrix.h: first pass at making matrix indexing faster 2010-10-21 Dirk Eddelbuettel * inst/include/Rcpp/Module.h: Reorder instantiation for class_ 2010-10-20 Dirk Eddelbuettel * include/Rcpp/XPtr.h: Applied patch by Karl Millar * include/Rcpp/vector/Vector.h: Idem 2010-10-19 Dirk Eddelbuettel * src/posixt.cpp: Correct POSIXct, POSIXt ordering for R 2.12.0 2010-10-14 Dirk Eddelbuettel * DESCRIPTION (Version): Release 0.8.7 * debian/*: Similarly updated for new release to Debian 2010-10-10 Romain Francois * tests/doRUnit.R: workaround to disable tests on windows 64 until we can figure out what upsets R CMD check. * R/Module.R: expose the finalizer 2010-10-07 John M Chambers * R/Module.R: modify cpp_refMethods to substitute the .External directly with the method and class pointers. 2010-10-03 Dirk Eddelbuettel * inst/include/Rcpp/stats/random/r*: Added comment reminding users read up on Section 6.3 of "Writing R Extensions" and the need to call GetRNGstate() and PutRNGstate() when using R's RNGs 2010-09-30 Romain Francois * inst/include/Rcpp/vector/MatrixRow.h: Matrix row inherits VectorBase so that it becomes a sugar expression, so that we can do something like this: NumericMatrix x( ... ) ; NumericVector x0 = x.row(0) ; * inst/include/Rcpp/vector/MatrixColumn.h: idem for columns * cleanup: run make clean in the inst/doc directory to install the fake vignettes 2010-09-27 Romain Francois * inst/include/Rcpp/traits/is_sugar_expression.h: new trait class to recognize sugar expressions * inst/include/Rcpp/vector/Vector.h: operator=( sugar expression) no longer allocate unnecessary memory. 2010-09-26 Romain Francois * inst/include/Rpp/Fast.h: new helper class Rcpp::Fast that allows faster indexing of Vector * inst/include/Rcpp/sugar/operators/plus.h: port to operator+ the same improvements than in operator* 2010-09-25 Romain Francois * inst/include/Rcpp/routines.h: declare routines that are registered * src/Rcpp_init.c: register routines * R/*.R: use registration information in many .Call and .External functions to speed things up * inst/include/Rcpp/RangeIndexer.h: experimenting with loop unrolling 2010-09-24 John M Chambers * R/Module.R: modify cpp_fields to substitute the .Call directly with the field and class pointers; supplements the changes entered by Romain on 9-22. (svn rev 2165, 2141) * src/Rcpp_init.c: set up registration of .Call's (rev 2167) 2010-09-24 Romain Francois * inst/include/Rcpp/sugar/Range.h : Range gains some operators (++,--,n etc ...) * inst/examples/ConvolveBenchmarks/convolve3_cpp.cpp: using the new Range operators * inst/include/Rcpp/sugar/operators/times.h: speed improvements. Not using pointer to member functions seems to be beneficial. * inst/include/Rcpp/sugar/nona/nona.h: sugar function that wraps a sugar expression in an object that pretends it does not contain any missing values. This allows many sugar functions and operators to use their fast versions when we know that the object does not contain missing values. 2010-09-22 Romain Francois * R/Module.R: set [[ and [[<- as regular methods too, which restores previous behavior 2010-09-17 Romain Francois * src/Reference.cpp: new objects are created via a callback to R's new function, as R_do_new_object did always return the same environment * R/00_classes.R: new ref class C++Method to represent C++ methods and holding their external pointers directly (same idea as C++Field) * inst/include/Rcpp/Module.h: internal support for C++Method (template class S4_CppMethod) 2010-09-17 John M Chambers * R/00_classes.R, R/02_completion.R, et al.: use of environment underlying the reference classes removes need for slots in C++Object class (svn rev's 2133, 2134) 2010-09-16 Romain Francois * R/00_classes.R: moving classes definition here * inst/Rcpp/Module.h: added C++ class S4_field that builds S4 objects of class C++Field. Build the list of fields as part of the creation of the C++Class objects * src/Module.cpp: .Call functions CppField__get and CppField__set to get/set values of an object's field using external pointers directly (no std::map lookup internally) * R/Module.R: (unexported) functions .getField and .setField that call CppField__get and CppField__set * inst/include/Rcpp/Reference.h: skeleton for a Rcpp::Reference class that will help dealing with reference classes on the C++ side * src/Reference.cpp: implementation (needs update) 2010-09-16 John M Chambers * R/Module.R, tests/modRef.R: un-generic of new(); return a generator object for C++ classes. Use environment as superclass. 2010-09-15 Romain Francois * DESCRIPTION: added the declaration MinimumSvnRev to control which version of R-devel we need so that Rcpp fully works, currently set to 52905 * R/zzz.R: check the svn revision of R against the declared MinimumSvnRev requirement and print a message if necessary (this will only stay for the interim period while we develop 0.8.7 so that we all are on the same page. * inst/include/Rcpp/Module.h: added methods to class_Base : methods_arity and methods_voidness to query the number of arguments of methods of a class and if the method is void * R/Module.R: implement referenceMethods (from methods) for 'C++Class' 2010-09-11 Dirk Eddelbuettel * src/Date.cpp: Add include of unistd.h to make Solaris happy 2010-09-09 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.6 * debian/*: Similarly updated for new release to Debian 2010-09-08 Dirk Eddelbuettel * inst/include/RcppCommon.h: Also include typeinfo header file 2010-09-08 Romain Francois * inst/include/Rcpp/Module.h : added class_Base::property_names method to grab the names of all fields (properties) * src/Module.cpp : added R access (.Call) function CppClass__properties to grab the names of the fields (property) from the XP of a class * inst/include/Rcpp/Module.h : added class_Base::property_is_readonly method to query if a property is read only * src/Module.cpp : added R access (.Call) function CppClass__property_is_readonly to query if a class property is read only * inst/include/Rcpp/Module.h : added class_Base::property_class method to grab the C++ class of a property * src/Module.cpp : added R access (.Call) function CppClass__property_class to grab the C++ class of a property 2010-09-06 Dirk Eddelbuettel * inst/examples/ConvolveBenchmarks/exampleRCode.r: Rewritten / simplified using the rbenchmark::benchmark() function * DESCRIPTION: Added Suggests: on rbenchmark package 2010-09-04 Dirk Eddelbuettel * inst/examples/ConvolveBenchmarks/exampleRCode.r: Some cosmetics * inst/examples/ConvolveBenchmarks/convolve3_cpp.cpp: Remove one unneccessary loop to set values to zero (which the ctor does for us) 2010-09-03 Dirk Eddelbuettel * inst/doc/Rcpp-extending/Rcpp-extending.Rnw: Add highlight definitions * inst/doc/Rcpp-FAQ/Rcpp-FAQ.Rnw: Idem * inst/doc/Rcpp-package/Rcpp-package.Rnw: Idem 2010-09-02 Dirk Eddelbuettel * src/msvcmath.cpp: Undo unmotivated msvc patch * inst/include/Rcpp/msvc/: Idem * inst/include/Rcpp/XPtr.h: Idem * inst/include/RcppCommon.h: Idem * src/Date.cpp: Idem * DESCRIPTION: Added Suggests: on highlight package 2010-08-20 Romain Francois * inst/include/Rcpp/complex.h : binary operators for Rcomplex : +,-,*,/ 2010-08-15 Romain Francois * inst/include/Rcpp/sugar/SugarBlock.h: more control of the NA behavior in SUGAR_BLOCK_2. SUGAR_BLOCK_2 will now propagate the NA, and the new SUGAR_BLOCK_2_NA will use a fixed NA (can be true or false). This can be useful if the function that is sugar'ed never generates NA. * inst/include/Rcpp/sugar/undoRmath.h : undo the macros done by Rmath.h 2010-08-13 Douglas Bates * include/Rcpp.h: undo more defines from Rmath.h 2010-08-13 Romain Francois * inst/include/Rcpp/sugar/complex.h: simplify complex sugar functions Re, Im, Conj, Mod * inst/include/Rcpp/sugar/complex.h: new sugar functions operating on complex expressions: exp, log, sqrt, cos, sin, tan, acos, asin, atan, acosh, asinh, atanh, cosh, sinh, tanh * inst/unitTests/runit.sugar.R: added regression test for complex functions which did not handle NA properly before * DESCRIPTION: no longer requireing GNU make as we dont use it anymore * src/Makevars: removed the use of ifeq (which was the last thing requiring GNU make) 2010-08-12 Romain Francois * inst/include/Rcpp/sugar/math.h: replace previous versions of floor, abs, exp, ceil, ceiling with versions generated by the SUGAR_MATH_1 macro 2010-08-11 Romain Francois * inst/include/Rcpp/vector/vector.h: Vector gains constructor taking size and function pointers, acting as generators : Vector( const int& siz, stored_type (*gen)(void), bool seed = true ) template Vector( const int& siz, stored_type (*gen)(U1), const U1& u1, bool seed = true) template Vector( const int& siz, stored_type (*gen)(U1,U2), const U1& u1, const U2& u2, bool seed = true) so that for example : NumericVector( 10, norm_rand ) generates a N(0,1) vector of size 10 * inst/include/Rcpp/stats/random/rlnorm.h: Added rlnorm and rlnorm_ * inst/include/Rcpp/stats/random/rgamma.h: Added rgamma and rgamma_ * inst/include/Rcpp/stats/random/rt.h: Added rt and rt_ * inst/include/Rcpp/stats/random/rbinom.h: Added rbinom and rbinom_ * inst/include/Rcpp/stats/random/rnchisq.h: Added rnchisq and rnchisq_ * inst/include/Rcpp/stats/random/rgeom.h: Added rgeom and rgeom_ * inst/include/Rcpp/stats/random/rhyper.h: Added rhyper and rhyper_ * inst/include/Rcpp/stats/random/rnbinom_mu.h: Added rnbinom_mu and rnbinom_mu_ * inst/include/Rcpp/stats/random/rnbinom.h: Added rnbinom and rnbinom_ * inst/include/Rcpp/stats/random/rpois.h: Added rpois and rpois_ * inst/include/Rcpp/stats/random/rweibull.h: Added rweibull and rweibull_ * inst/include/Rcpp/stats/random/rlogis.h: Added rlogis and rlogis_ * inst/include/Rcpp/stats/random/rwilcox.h: Added rwilcox and rwilcox_ * inst/include/Rcpp/stats/random/rsignrank.h: Added rsignrank and rsignrank_ * inst/include/Rcpp/stats/random/rnorm.h: some optimization * inst/include/Rcpp/stats/random/rf.h: calculate n2/n1 just once * inst/include/Rcpp/sugar/SugarBlock.h : templates and macros to facilitate generation of sugar functions that take one or two double parameters * inst/include/Rcpp/sugar/math.h: using SugarBlock to generate new sugar functions: (1 parameter) : gamma, lgamma, digamma, trigamma, tetragamma, pentagamma, expm1, log1p, factorial, lfactorial, cos, acosh, atan, cos, cosh, log, log10, sqrt, sin, sinh, tan, tanh (2 parameter) : choose, lchoose, beta, lbeta, psigamma 2010-08-10 Douglas Bates * include/Rcpp/stats/nbinom[_mu].h: Replace conflicting data member name 'size' by 'siz' 2010-08-10 Romain Francois * inst/include/Rcpp/stats/random/rnorm.h: Added rnorm and rnorm_ * inst/include/Rcpp/stats/random/runif.h: Added runif and runif_ * inst/include/Rcpp/stats/random/rbeta.h: Added rbeta and rbeta_ * inst/include/Rcpp/stats/random/rcauchy.h: Added rcauchy and rcauchy_ * inst/include/Rcpp/stats/random/rchisq.h: Added rchisq and rchisq_ * inst/include/Rcpp/stats/random/rexp.h: Added rexp and rexp_ * inst/include/Rcpp/stats/random/rf.h: Added rf and rf_ * inst/include/Rcpp/stats/stats.h : fixed name clash reported on Rcpp-devel http://permalink.gmane.org/gmane.comp.lang.r.rcpp/610 2010-08-09 Romain Francois * inst/include/Rcpp/stats/lnorm.h: Added d-p-q (lnorm|weibull|logis|f) generated by the script * inst/include/Rcpp/vector/Vector.h: further dispatch to allow generators to be passed to constructors of Vector * inst/include/Rcpp/traits/has_iterator.h: new SFINAE detection of generators * inst/include/Rcpp/Generator.h : base template class for generators 2010-08-06 Douglas Bates * unitTests/runit.stats.R: Corrected instances of numeric arguments passed as integers, deleted tests for binomial with fixed parameter values. 2010-08-06 Romain Francois * ../scripts/stats.R: R script to generate the template code for dpq functions * include/Rcpp/stats/unif.h: Added d-p-q unif and tests * include/Rcpp/stats/gamma.h: Added d-p-q gamma and tests * include/Rcpp/stats/chisq.h: Added d-p-q chisq 2010-08-05 Douglas Bates * include/Rcpp/stats/beta.h: Added d-p-q beta and tests * include/Rcpp/stats/binom.h: Added pbinom and qbinom, and tests of same in runit.stats.R * include/Rcpp/stats/pois.h: Added ppois and qpois (plus tests in runit.stats.R). * include/Rcpp/stats/norm.h: Added pnorm and qnorm and corresponding tests in unitTests/runit.stats.R 2010-08-05 Dirk Eddelbuettel * inst/include/Rcpp/stats/norm.h: Added dnorm sugar function * inst/include/Rcpp/stats/t.h: Added dt, pt, qt sugar functions * inst/include/unitTests/runit.stats.R: Added corresponding tests 2010-08-05 Romain Francois * inst/include/Rcpp/sugar/functions/seq_along.h: added seq(int,int) to mimic the R syntax : seq( 0, 5 ) * inst/include/Rcpp/sugar/Range.h: fixed compiler confusion * inst/include/Rcpp/stats: new sugar functions Rcpp::stats::dpois and Rcpp::stats::dbinom inspired by Richard Chandler post on Rcpp-devel: http://lists.r-forge.r-project.org/pipermail/rcpp-devel/2010-August/000940.html * inst/include/Rcpp/sugar/sum.h: preliminary version of Rcpp::sum (does not deal with NA properly yet) 2010-08-04 Romain Francois * inst/include/Rcpp/sugar/: rework sugar matrix so that operator()(int,int) is always used instead of operator[](int) * inst/include/Rcpp/sugar/matrix/outer.h: new implementation based on LazyVector, so that the value from the vector expression is only retrieved once 2010-08-02 Romain Francois * inst/include/Rcpp/XPtr.h: give default values to tag and prot in XPtr ctor 2010-07-30 Romain Francois * inst/doc/Rcpp-quickref/* : new vignette Rcpp-quickref: quick reference guide to Rcpp API 2010-07-28 Romain Francois * inst/include/Rcpp/sugar/exp.h: adapt to stricter standards on solaris/suncc 2010-07-25 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.5 * debian/*: Similarly updated for new release to Debian 2010-07-17 Romain Francois * inst/include/Rcpp/vector/Vector.h: faster lhs use of names, only using callback to R if necessary. (discovered while profiling RProtoBuf) * inst/include/Rcpp/RObject.h : faster lhs and rhs use of RObject::slot, using R API functions R_do_slot and R_do_slot_assign 2010-07-16 Dirk Eddelbuettel * src/Date.cpp: Small fix which may make Solaris/SunStudio happy 2010-07-16 Romain Francois * man/Rcpp-package.Rd : removed old content and point to the Rcpp-package vignette for current guidelines. * DESCRIPTION: Updated to mention sugar and modules 2010-07-10 Romain Francois * src/Makevars: Remove last call to $shell by turning C++0x detection off (and into a switch users can edit) which should make builds more stable * src/Makevars.win: Idem * src/cxx0x/cxx0x.R: Detection script deprecated for now 2010-07-10 Romain Francois * man/CppClass-class.Rd: changed use of \linkS4Class to suppress a warning with the development version of R * man/CppObject-class.Rd: idem 2010-07-09 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.4 * debian/*: Similarly updated for new release to Debian 2010-07-09 Romain Francois * src/RObject.cpp: adapt the SlotProxy class to deal with the special case of the .Data slot (slot<- changes the internal SEXP) * R/Module.R: the C++Class now inherits from "character", to facilitate S4 method dispatch * src/Module.cpp: The CppClass ctor sets the .Data of the C++Class object to an obfuscated name to avoid class names clashes at the R level. 2010-07-08 Romain Francois * inst/include/Rcpp/sugar/functions/head.h: new sugar function : head * inst/include/Rcpp/sugar/functions/tail.h: new sugar function : tail * inst/include/Rcpp/sugar/functions/tail.h: new sugar function : diag 2010-07-07 Dirk Eddelbuettel * inst/README: Updated and now pointing to all the other documentation 2010-07-07 Romain Francois * inst/include/Rcpp/sugar/functions/rep.h: version of rep that takes a primitive as the first argument 2010-07-07 Dirk Eddelbuettel * inst/unitTests/runTests.R: Reverted to running all tests now that tests are reorganised using the one-compile-per-function scheme which significantly speeds up running of the numerous unit tests 2010-07-06 Dirk Eddelbuettel * src/Date.cpp: Imported mktime() from R (which is due to Arthur Olson) 2010-07-06 Romain Francois * inst/include/Rcpp/sugar/functions/ifelse.h: using compile time dispatch based on the NA-ness of the condition type. ifelse handles primitive arguments on the lhs, rhs or both * inst/include/Rcpp/sugar/functions/rev.h: new sugar function: rev 2010-07-05 Romain Francois * inst/include/Rcpp/RcppCommon.h : no more using variadic macros in RCPP_DEBUG * inst/include/Rcpp/vector/Matrix.h: move ncol, nrow, rows and cols in Matrix (used to be in Vector) * inst/include/Rcpp/traits/matrix_interface.h: new SFINAE helper to detect matrix interface (helps matrix sugar expressions) 2010-07-03 Romain Francois * inst/include/Rcpp/traits/result_of.h : also deal with functions taking two arguments (useful for e.g. outer) * inst/include/Rcpp/vector/MatrixBase.h : new CRTP base class for Matrix to facilitate sugar syntax on matrices. * inst/include/Rcpp/sugar/matrix/outer.h : new sugar function: outer * inst/include/Rcpp/sugar/matrix/row.h: new sugar function: row * inst/include/Rcpp/sugar/matrix/col.h: new sugar function: col * inst/include/Rcpp/sugar/matrix/lower_tri.h: new sugar function: lower_tri * inst/include/Rcpp/sugar/matrix/upper_tri.h: new sugar function: upper_tri * inst/include/Rcpp/sugar/functions/rep.h: new sugar function : rep * inst/include/Rcpp/sugar/functions/rep_len.h: new sugar function : rep_len * inst/include/Rcpp/sugar/functions/rep_each.h: new sugar function : rep_each 2010-07-02 Dirk Eddelbuettel * src/RcppStringVector: Now uses std::vector * inst/include/classic/RcppStringVector.h: Idem * inst/unitTests/runit.List.R: Added simple test for RcppStringVector 2010-07-01 Dirk Eddelbuettel * src/RcppDateVector: Index argument is int here as well * src/RcppDatetimeVector: Idem * inst/include/classic/RcppDateVector.h: Idem * inst/include/classic/RcppDatetimeVector.h: Idem * inst/unitTests/runit.List.R: Added simple test for RcppList 2010-06-30 Dirk Eddelbuettel * src/DateVector: Index argument is int; throw declared * src/DatetimeVector: Idem * inst/include/Rcpp/DateVector.h: Idem * inst/include/Rcpp/DatetimeVector.h: Idem 2010-06-28 Romain Francois * inst/include/Rcpp/sugar/Im.h: * inst/include/Rcpp/sugar/Re.h: * inst/include/Rcpp/sugar/Conj.h: * inst/include/Rcpp/sugar/Mod.h: added sugar functions for complex vectors: Re, Im, Conj, Mod 2010-06-27 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.3 * debian/*: Similarly updated for new release to Debian * inst/unitTests/runTests.R: Stop-gap measure to reduce the number of tests run on Windows as we now have so many tests that the build exceeds the time limit granted by the win-builder service. The forced reduction of tests can be overcome by adding --allTests as a command-line argument on Windows, or by running on another platform. 2010-06-25 Romain Francois * inst/include/Rcpp/posix.h: anticipate R 2.12.0 switch of classes POSIXt and POSIXct * inst/include/classic: New home for the 'classic' API headers. Also some refactoring of the internals so that they can interoperate better withuse the new API. 2010-06-24 Romain Francois * inst/include/Rcpp/vector/RangeIndexer.h: factored the RangeIndexer class out of Vector, so that we can at a later time specialize it for character vectors, lists, etc ... 2010-06-24 Dirk Eddelbuettel * inst/include/Rcpp/Date.h: add struct tm member variable and sensible (ie non-intra-day) accessor functions; add SEXP ctor * src/Date.cpp: Implementation of the above * inst/unitTests/runit.Date.R: tests for the above * inst/include/Rcpp/Datetime.h: New Datetime class * src/Datetime.cpp: Implementation for new Datetime class * inst/unitTests/runit.Datetime.R: first tests for Rcpp::Datetime * inst/include/Rcpp/Datetime_forward.h: API Integration * inst/include/Rcpp/DatetimeVector.h: New DatetimeVector class * src/Datetime.cpp: Implementation for new DatetimeVector class 2010-06-23 Dirk Eddelbuettel * src/Date.cpp: Import mktime00() from R's src/main/datetime.c, completed class implementation * inst/include/Rcpp/Date.h: Add mktime00() declaration * inst/include/Rcpp/DateVector.h: New DateVector class * src/Date.cpp: Implementation for new DateVector class 2010-06-23 Romain Francois * inst/include/Rcpp/Date_forward.h: forward declaration of Rcpp::Date and support for wrap( container of Rcpp::Date ), e.g. wrap( vector ) * inst/include/Rcpp/sugar/Range.h: added the concept of range to allow modification of several elements of a vector. * inst/examples/ConvolveBenchmarks: version of the convolution function using sugar indexing. 2010-06-22 Dirk Eddelbuettel * inst/include/Rcpp/Date.h: New Date class (not yet complete) * src/Date.cpp: Implementation for new Date class (not yet complete) * inst/unitTests/runit.Date.R: first tests for Rcpp::Date 2010-06-21 Dirk Eddelbuettel * inst/examples/SugarPerformance/: New example to benchmark the new syntactic 'sugar' classes 2010-06-19 Dirk Eddelbuettel * inst/include/RcppDoxygenExamples.h: Correct three wrong paths for ConvolveBenchmak example files, and add missing FastLM/ examples 2010-06-18 Romain Francois * inst/include/Rcpp/sugar/*: implementation of Rcpp sugar, covering binary operators (<,>,<=,>=,!=,==) for logical vectors or logical expressions, arithmetic operators (+,-,*,/) for vectors and expressions, and several functions similar to the R functions of the same name, currently: abs, all, any, ceiling, diff, exp, ifelse, is_na, lapply, pmin, pmax, pow, sapply, seq_along, seq_len, sign * inst/doc/Rcpp-sugar/Rcpp-sugar.Rnw: vignette documenting Rcpp sugar 2010-06-17 Romain Francois * inst/include/Rcpp/Vector.h: split into more manageable files * inst/include/Rcpp/vector/VectorBase.h: simplify the VectorBase class so that it is just implementing CRTP. It does not inherit from RObject anymore. This will help implementation of sugar. 2010-06-16 Dirk Eddelbuettel * src/RcppDateVector.cpp: Also provide non-const operator()(int i) * inst/include/RcppDateVector.h: Idem 2010-06-16 Romain Francois * inst/include/Rcpp/InternalFunction.h: new class Rcpp::InternalFunction * R/Module.R: R support for Rcpp::InternalFunction * inst/include/Rcpp/Module.h: added the LOAD_RCPP_MODULE macro to allow loading a module from C++ * R/Module.R: if the first argument is an external pointer already, Module assumes it is a module pointer. (R support for the item above) 2010-06-15 Dirk Eddelbuettel * src/RcppDatetimeVector.cpp: Use std::vector internally * inst/include/RcppDatetimeVector.h: Idem * src/RcppDateVector.cpp: Use std::vector internally * inst/include/RcppDateVector.h: Idem 2010-06-14 Dirk Eddelbuettel * src/RcppDatetimeVector.cpp: Add constructor from int * inst/include/RcppDatetimeVector.h: Idem * src/RcppDateVector.cpp: Add constructor from int * inst/include/RcppDateVector.h: Idem 2010-06-13 Dirk Eddelbuettel * src/RcppResultSet.cpp: Proper template specialisation for wrap * inst/include/RcppResultSet.h: Idem * src/RcppDateVector.cpp: Add const qualifier to operator()(int i) * inst/include/RcppDateVector.h: Idem 2010-06-13 Romain Francois * inst/include/Rcpp/Vector.h: added new factory functions for Vector: Vector::import and Vector::import_transform 2010-06-12 Dirk Eddelbuettel * src/RcppDate.cpp: Simple RcppDate(SEXP) ctor added * inst/include/RcppDate.h: Idem * src/RcppResultSet.cpp: carved out four new wrap() functions by splitting the existing code in add() methods off 2010-06-11 Romain Francois * R/help.R: workaround to allow the syntax "Rcpp ? something" to bring Rcpp documentation * inst/include/Rcpp/Module.h: support for exposing public data members * inst/doc/Rcpp-modules/Rcpp-modules.Rnw: a section to mention fields as a way to expose data members * inst/Rcpp/traits/is_na.h : new helper class Rcpp::traits::is_na 2010-06-09 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.2 * debian/*: Similarly updated for new release to Debian 2010-06-08 Romain Francois * src/RcppCommon.cpp: track if demangling is available (currently only available with gcc) 2010-06-08 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.1 * debian/*: Similarly updated for new release to Debian 2010-06-07 Dirk Eddelbuettel * inst/doc/Rcpp-extending*: Extended mini vignette "Rcpp-extending" 2010-06-07 Romain Francois * inst/doc/Rcpp-extending*: Added new mini vignette "Rcpp-extending" 2010-06-05 Dirk Eddelbuettel * inst/doc/Rcpp-FAQ*: Extended mini vignette "Rcpp-FAQ" 2010-06-05 Romain Francois * inst/doc/Rcpp-FAQ*: Added new mini vignette "Rcpp-FAQ" 2010-06-04 Romain Francois * inst/include/Rcpp/Module.h: * R/Module.R: support for properties of C++ objects 2010-06-03 Romain Francois * src/RcppCommn.cpp: added show method for C++Object and C++Class * inst/include/Rcpp/XPtr.h: getTag and getProtected are deprecated, will be removed in Rcpp 0.8.2. methods tag and prot should be used instead. The new methods support both lhs and rhs use. 2010-06-02 Romain Francois * inst/include/Rcpp/traits/r_type_traits.h: added missing support for std::complex, needed by RcppArmadillo * src/RcppCommon.cpp: added internal .Call function as_character_externalptr to extract the address of the pointer wrapped by an external pointer 2010-06-01 Romain Francois * inst/doc/Rcpp-package*: new mini vignette "Rcpp-package" to improve the documentation of Rcpp.package.skeleton and details the steps involved in making a package that uses Rcpp * inst/doc/Rcpp-modules/Rcpp-modules.Rnw: document how to use modules in other packages (namespace, etc ...) * R/Rcpp.package.skeleton: added the module argument * R/Module.R: prompt method for Module objects to generate skeleton of an Rd file with the list of functions and classes defined by the module. 2010-05-30 Romain Francois * R/Module.R: completion for C++ modules. 2010-05-29 Romain Francois * R/Module.R: when a Module is loaded, it creates extensions of the class C++Object for each internal class to enable S4 dispatch * R/Module.R: support for completion of methods of C++ objects 2010-05-28 Romain Francois * R/cppfunction.R: withdrawn, we now use inline::cxxfunction which is more flexible and we no longer need to depend on inline * man/cppfunction.Rd: * * inst/unitTests/runTests.R: The tests now require a recent version of inline (>= 0.3.4.2) 2010-05-27 Romain Francois * inst/include/Rcpp/Module.h: adding support for registering a free function that takes a pointer to the class of the wrapped object as first argument in class_ 2010-05-26 Romain Francois * inst/include/Rcpp/Module.h: * src/Module.cpp : limited support for exposing c++ classes in Rcpp modules * R/Module.R : classes "C++Class", "C++Object" holding external pointers and $ method dispatching internally 2010-05-24 Dirk Eddelbuettel * src/Rcpp*.cpp: Moved template code from the older API to headers headers in inst/include/*.h; removed empty source files 2010-05-21 Romain Francois * R/exceptions.R: rework rcpp_tryCatch to prevent evaluating the expression too early (reported by Doug Bates on Rcpp-devel) * src/Evaluator.cpp: rework Evaluator::run() so that it correctly evaluates inside an environment (reported by Doug Bates on Rcpp-devel) 2010-05-20 Romain Francois * inst/include/Rcpp/Vector.h : correct throw specs for vector_from_string (reported by Brian Ripley from solaris) * inst/include/Rcpp/internal/Proxy_Iterator.h: fixed constness of several operators in Proxy_Iterator to try to suite suncc/solaris * inst/include/Rcpp/config.h: define RCPP_ENABLE_MODULES to hide the experimental module features from the official api * R/getDLL.R: removed and promoted to getDynLib in inline 2010-05-19 Romain Francois * inst/include/Rcpp/as.h: add throw specification to as specialization, reported by suncc compiler on CRAN checks * inst/include/Rcpp/Module.h : adding the concept of Rcpp modules, inspired from boost.python * R/Module.R: R side support for modules * R/getDLL.R: generic (s4) function to get the DLL based on either its name e.g. getDLL( "Rcpp" ) or an object of class CFunc (from the inline package) 2010-05-17 Dirk Eddelbuettel * DESCRIPTION: Release 0.8.0 * debian/*: Similarly updated for new release to Debian 2010-05-11 Romain Francois * inst/include/Rcpp/traits/*.h: added support for long long int and unsigned long long int, which is size_t on win64 2010-05-10 Romain Francois * inst/include/Rcpp/Dimension.h: added a const operator[], requested in the Rcpp-devel thread : http://article.gmane.org/gmane.comp.lang.r.rcpp/327 * inst/include/Rcpp/preprocessor.h: added __rcpp_info__ pseudo reflection information to RCPP_XP_FIELD * inst/unitTests/runit.macros.R: testing RCPP_XP_FIELD 2010-05-06 Romain Francois * inst/include/Rcpp/DataFrame.h: DataFrame( RObject::SlotProxy ) and DataFrame( RObject::AttributeProxy ) constructors * inst/include/Rcpp/DataFrame.h: DataFrame::create now uses the R function data.frame and not as.data.frame, which respects the stringsAsFactors argument. * inst/include/Rcpp/preprocessor.h: added RCPP_XP_FIELD_SET and RCPP_XP_FIELD_SET macros to generate getter and setter for a field of a class handled by an external pointer. RCPP_XP_FIELD is modified to generate both getter and setter 2010-05-05 Romain Francois * inst/include/Rcpp/S4.h: S4 gains a "is" method to identify if an object is of a given S4 class, following Doug's advice in lme4a * inst/include/Rcpp/algo.h: new STL-like algorithms Rcpp::any and Rcpp::any_if * inst/include/Rcpp/Vector.h: Vector gains a constructor taking an RObject::SlotProxy and a constructor taking an RObject::AttributeProxy, allowing this construct NumericVector x( y.slot( "foo" ) ) 2010-05-04 Romain Francois * inst/include/Rcpp/preprocessor_generated.h: new macros to hide most of the boiler plate code RCPP_FUNCTION_0, ..., RCPP_FUNCTION_1 RCPP_FUNCTION_VOID_0, ... RCPP_XP_METHOD_0, ... RCPP_XP_METHOD_CAST_0, ... RCPP_XP_METHOD_VOID_0, ... 2010-05-03 Dirk Eddelbuettel * inst/unitTests/runit.DataFrame.R: unit tests for Rcpp::DataFrame 2010-05-03 Romain Francois * inst/include/Rcpp/exceptions.h : move the what methods of exception classes so that the symbol is defined for sure in the shared library. This seems to make a difference due to vague linkage issues. Decrypted from http://gcc.gnu.org/wiki/Visibility 2010-05-02 Romain Francois * inst/include/Rcpp/as.h: add throw(not_compatible) in Rcpp::as * inst/include/Rcpp/clone.h: the clone(SEXP) moves to the headers 2010-04-28 Romain Francois * inst/include/Rcpp/Vector.h: changed Vector( size_t ) to Vector( int ) to allow Vector( 0 ) and Vector::create() 2010-04-27 Romain Francois * inst/include/Rcpp/preprocessor.h: new macro RCPP_ENUM_TRAITS to generate traits needed to support wrap for an enum type (used in RProtoBuf) * R/Rcpp.package.skeleton.R: correctly handle the example_code argument 2010-04-26 Romain Francois * inst/include/Rcpp/DataFrame_*.h: new class Rcpp::DataFrame * inst/include/Rcpp/preprocessor.h: added RCPP_XP_FIELD macro * inst/include/Rcpp/preprocessor_generated.h: added the set of macros RCPP_WRAPPER_0, ..., RCPP_WRAPPER_65 to help wrapping existing C functions into .Call callables functions 2010-04-16 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.12 * debian/*: Similarly updated for new release to Debian * RcppLdpath.R: Remove shQuote() from trying to protect spaces in Windows pathnames as it breaks backticks expansion usage 2010-04-06 Romain Francois * inst/include/Rcpp/traits/*.h: added support for long 2010-04-04 Romain Francois * inst/include/* : headers are moved to inst/include so that they are are not duplicated on multi arch platforms * R/RcppLdPath.R: RcppCxxFlags is updated to reflect the above change * src/Makevars: simplified as the headers don't need to be copied to each arch lib directory anymore * src/Makevars.win: same * inst/include/Rcpp/Vector.h : Vector<> gains a templated assignment operator 2010-04-02 Romain Francois * src/Rcpp/Formula.h: new Rcpp::Formula class * inst/unitTests/runit.Formula.R: unit test for Rcpp::Formula 2010-03-26 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.11 * debian/*: Similarly updated for new release to Debian * inst/examples/FastLM: Updated to use new create() method * inst/unitTests/runit.Matrix.R: New unit test new Matrix constructors 2010-03-26 Romain Francois * src/Rcpp/Vector.h: Fixed bug in diag() 2010-03-23 Dirk Eddelbuettel * inst/unitTests/runit.CharacterVector.R: New unit test for bug found by Doug 2010-03-23 Romain Francois * src/Rcpp/Vector.h: fixed critical bug. Vector did not have copy constructor and assignement operators * src/exceptions.cpp: added the demangle helper function to help debugging * src/RcppCommon.h: added the DEMANGLE macro and the RCPP_DEBUG macro to help debugging. 2010-03-20 Romain Francois * src/Rcpp/Vector.h : Vector gains a templated fill method to fill all elements of a vector with the same value 2010-03-19 Romain Francois * src/Rcpp/Vector.h : Matrix gains a diag method to create diagonal matrices * src/Rcpp/Named.h: Named is no longer a class, but a templated function. This preserves all the existing interface, but also allows Named to be used in making simple vectors, e.g through the Vector::create factory functions * src/Rcpp/Vector.h: Vector gains the "create" factory methods taking up to 20 arguments that can be named (using the Argument class or the _ placeholder) * src/Rcpp/make_list.h: removed since Vector::create does the job more generically and more efficently 2010-03-19 Dirk Eddelbuettel * src/Rcpp/Vector.h: Matrix now also accepts a single int in the constructor to create matrices of square sizes * src/RcppFrame.h: Patch by Alistair Gee to make ColDatum more robust src/RcppFrame.h: Idem * inst/unitTests/runit.RcppFrame.R: New unit test for RcppFrame 2010-03-16 Romain Francois * src/Rcpp/make_list.h: set of helper factories make_list to facilitate production of named generic vectors. * src/Rcpp/Named.h: new class Rcpp::Argument similar to Named but does not contain the object, just the name. The templated Argument::operator= makes a Named. This allows an application to define a set of arguments that it uses in order to have a nicer construct. see the runit.Argument.R file for an example 2010-03-15 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.10 * debian/*: Similarly updated for new release to Debian * RcppLdpath.R: Use shQuote() to protect spaces in Windows pathnames 2010-03-15 Romain Francois * inst/codebloat/codebloat.R: script to generate code (creating a pairlist with up to n arguments). * src/Rcpp/Function.h : Function gains a body method to retrieve the body of the function (using the BODY macro from Rinternals.h) 2010-03-14 Romain Francois * src/Rcpp/S4.h : Rcpp::S4 gains a new constructor taking a string reference and building a new S4 object of that type. This throws an exception if the object is not successfully created (e.g the class is not a known S4 class) 2010-03-13 Romain Francois * src/Rcpp/S4.h : new class Rcpp::S4 2010-03-12 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.9 * debian/*: Similarly updated for new release to Debian 2010-03-12 Romain Francois * inst/unitTests/runit.environments.R: mac os has a different locale * src/Rcpp/traits/is_convertible.h: the detection is now performed without the help of cxx0x or tr1 which makes it compatible with gcc 4.2 * src/Rcpp/traits/is_same.h: new traits is_same to help detect if two types are the same (not currently used) * src/Rcpp/traits/wrap_type_traits.h: use "unsigned int" instead of "size_t" in the template specializations (64 bit compatibility) 2010-03-10 Dirk Eddelbuettel * R/RcppLdPath.R: More specific about quote-protection of path on Windows * inst/doc/Rcpp-introduction.Rnw: Applied several fixes kindly suggested by Matt Kraai 2010-03-09 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.8 * debian/*: Similarly updated for new release to Debian 2010-03-09 Romain Francois * man/Rcpp.package.skeleton.Rd: some more documentation 2010-03-07 Dirk Eddelbuettel * inst/doc/Rcpp-introduction.Rnw: Added vignette based on a recent paper 2010-03-07 Romain Francois * src/Rcpp/StringTransformer.h: new class template StringTransformer that allows using a character by character function to modify elements of a string vector (example available in package RcppExamples) * src/Rcpp/Vector.h: string_proxy::iterator is made const char* because R uses a global cache for the CHARSXP 2010-03-05 Romain Francois * src/Rcpp/Vector.h: string_proxy gains begin(), end(), size(), and operator[] for iterating over characters of the CHARSXP 2010-03-02 Romain Francois * src/Rcpp/Vector.h: Vector gains a nested r_type type that is an integral_constant to facilitate TMP * src/RcppCommon.{h,cpp}: added RCPP_CALL_VECTOR and RCPP_CALL_MATRIX macros to facilitate calling a function templated by T = Vector the macro hides the boiler-plate switch( TYPEOF(x) ){ case INTSXP : ... } 2010-03-01 Romain Francois * src/Rcpp/Vector.h: more typedef : CharacterMatrix, StringMatrix, GenericMatrix, ExpressionMatrix, ListMatrix * src/ExpressionVector.cpp : replaced by templates in Vector.h * src/Rcpp/Vector.h: use templates to cover ExpressionVector additional methods : eval() and eval(const Environment& ) 2010-02-28 Romain Francois * src/Rcpp/Vector.h : more generic code for vectors. All vector types are now generated from the template Rcpp::Vector where RTYPE is one of INTSXP, LGLSXP, REALSXP, RAWSXP, STRSXP, VECSXP or EXPRSXP. 2010-02-24 Romain Francois * src/Rcpp/exceptions.h: some exception classes factored out * src/Rcpp/VectorBase.h: now a template, using the Curiously recurring template pattern (the type parameter is the derived class) * src/Rcpp/SEXP_Vector.h: the intermediate class SEXP_Vector_Base is removed, reverting the change on 2010-02-09. This will facilitate the introduction of the Curiously recurring template pattern on vectors * src/Rcpp/MatrixRow.h : Row has been factored out of SimpleVector into a separate template class Rcpp::MatrixRow * src/Rcpp/SimpleVector.h: gains a row method that returns a SimpleVector::Row, aka MatrixRow * src/Rcpp/CharacterVector.h : gains a row method that returns a CharacterVector::Row, aka MatrixRow * src/Rcpp/SEXP_Vector.h : gains a row method that returns a SEXP_Vector::Row aka MatrixRow * src/Rcpp/MatrixColumn.h : Column class to access elements of a matrix column 2010-02-23 Romain Francois * src/Rcpp/SimpleVector.h: added the class SimpleVector::Row to support STL algorithms working on a row of a matrix. * src/Rcpp/internal/ListInitialization.h: new class that supports use of operator, (inspired from blitz) giving this notation: IntegerVector x(3); x = 0, 1, 2 ; 2010-02-21 Romain Francois * src/Rcpp/as.h: more generic as implementation. primitive types are handled through templates which for example makes it possible to as in RProtoBuf. std::deque and std::list become as'able when T is a primitive type as indicated by the Rcpp::traits::r_type_traits * src/as.cpp: removed since as is now fully implemented via templates 2010-02-19 Romain Francois * src/Rcpp/as.h: as now delegates to a template class Exporter since partial specialization was not possible with the interface of as. It is possible to partially specialize Exporter. std::vector when T is a primitive type is now handled through Exporter. Some support Exporter have been added and used in RcppArmadillo * src/Rcpp/internal/wrap.h: support for std::complex and std::complex (needed for RcppArmadillo) * src/Rcpp/traits/wrap_type_traits.h : The Importer concept has been introduced to support wrap() of more types. If a class has a typedef "r_import_type" then the following interface is assumed and used. The corresponding class must have methods int size() and r_import_type get(int). As usual further dispatch is performed based on r_import_type (primitive, etc ...). RcppArmadillo has an example of this for wrapping arma::field objects using the FieldImporter class. 2010-02-18 Romain Francois * src/Rcpp/Language.h: added fixed_call to support STL algorithms similar to generate. * inst/unitTests/runit.Language.R: unit test for fixed_call * src/Rcpp/Environment.h: Environment gains a find method which searches for a binding in the associated environment but also in all its parents, as opposed to get which just looks in the environment. 2010-02-17 Dirk Eddelbuettel * src/Makevars: Simplified as RcppExample.cpp is shipped off * src/Makevars.win: Simplified as RcppExample.cpp is shipped off 2010-02-17 Romain Francois * src/Rcpp/SEXP_Vector.h : The lhs use of operator[](string) has been improved so that if the name does not exist in the vector, the vector grows. * inst/unitTests/runit.GenericVector.R: new unit test test.List.implicit.push.back about the new operator[](string) * src/Rcpp/SimpleVector.h : new template class SimpleMatrix that derives from SimpleVector, with typedefs NumericMatrix IntegerMatrix, LogicalMatrix, RawMatrix, ComplexMatrix. The actual functionality comes from SimpleVector but SimpleMatrix has constructors and assignment operators that behave slighlty differently : they check that their input is a matrix * src/Rcpp/traits/wrap_type_traits: added support for float * src/Rcpp/Rcpp.h: now including RObject here instead of in RcppCommon.h because RObject is a client of implicit converters (attr) and so we need to leave a hook for third party code, e.g. RcppArmadillo 2010-02-16 Dirk Eddelbuettel * src/Makevars.wim: Applied improved version kindly supplied by Brian Ripley * R/RcppExample.R, man/RcppExample.Rd: Moved to RcppExamples package * man/RcppDate.Rd, man/RcppParams.Rd, man/RcppResultSet.Rd, RcppVector.Rd, src/RcppExample.cpp: Idem * inst/examples/FastLM: Slightly reworked, actual code factored out and used in a per-library demo/test script and a joint benchmark.r 2010-02-15 Dirk Eddelbuettel * inst/examples/FastLM: New example directory with two 'fast lm' implementations using, respectively, GNU GSL (in C) and Armadillo (in C++); Armadillo is seen as faster for lack of extra copying 2010-02-14 Romain Francois * src/Rcpp/Language.h: accepting Function in unary_call and binary_call to support STL algorithms using R functions. 2010-02-14 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.7 * debian/*: Similarly updated for new release to Debian 2010-02-14 Romain Francois * src/Rcpp/Language.h: fixing serious bug. The 'code bloat' constructors taking a std::string did not explicitely create a symbol, so the created calls were wrong. * src/Rcpp/Language.h: new template classes Rcpp::unary_call and Rcpp::binary_call to allow use of Language objects in STL algorithms. * inst/unitTests/runit.Language.R: unit test and example of using unary_call and binary_call 2010-02-12 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.6 * NEWS: Updated * debian/*: Similarly updated for new release to Debian 2010-02-12 Romain Francois * src/Rcpp/Environment.h: Environment gains a default constructor. This is needed for RInside. 2010-02-10 Romain Francois * src/Rcpp/SEXP_Vector.h: SEXP_Vector (and therefore ExpressionVector and GenericVector, a.k.a List) gain methods push_front, push_back and insert that are templated and use the 'implicit wrap idiom' to add an element to the front or, the back or an arbitrary (valid) position of the list, pushing other elements. Internally the SEXP is actually copied. * src/Rcpp/SEXP_Vector.h: SEXP_Vector gains an erase method modelled after std::vector<>::erase to remove elements from a list. erase has a single iterator (or int) form that removes one element, and a range based version erase(iterator first, iterator last) that erases all elements between first and last. * src/Rcpp/VectorBase.h: VectorBase gains a version of offset to support retrieving the offset of a given name of a vector: offset( const std::string& name) * src/Rcpp/SimpleVector.h : uses the new offset to perform names based indexing (FR #808) * src/Rcpp/SEXP_Vector.h: same * src/Rcpp/CharacterVector.h: same * inst/unitTests/runit.GenericVector.R: unit tests for names based indexing * inst/unitTests/runit.IntegerVector.R: same * inst/unitTests/runit.CharacterVector.R: same 2010-02-09 Dirk Eddelbuettel * inst/skeleton/Makevars: Use $R_HOME/bin indirection * inst/skeleton/Makevars.win: Idem 2010-02-09 Romain Francois * src/Rcpp/SEXP_Vector.h: The functionality of SEXP_Vector that was independent of the template parameter was factored out into a new base class SEXP_Vector_Base. This follows the advice of item 44 of Effective C++. * src/Rcpp/SEXP_Vector.h: SEXP_Vector_Base::iterator is introduced as well as methods begin() and end() to support use of stl algorithms on lists. * inst/unitTests/runit.GenericVector.R: new unit test for testing SEXP_Vector_Base::iterator and illustrating a c++ version of lapply using std::transform * src/Rcpp/CharacterVector.h: CharacterVector gains a random access iterator, begin() and end() to support STL algorithms. The iterator dereferences to a StringProxy * src/Rcpp/RObject.h: remove RObject::asFoo methods which were deprecated in Rcpp 0.7.5. The alternative is to use Rcpp::as 2010-02-08 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.5 * debian/*: Similarly updated for new release to Debian 2010-02-07 Romain Francois * src/RcppSexp.h: class RcppSexp removed (was deprecated) * src/Rcpp/*.h: defaults copy constructors and assignment operators have been added for all classes extending RObject. Otherwise the compiler generates default versions that circumvent the garbage collection management 2010-02-06 Dirk Eddelbuettel * inst/examples/functionCallback/newApiExamples.r: Added simpler version using the new API * inst/examples/functionCallback/newApiExamples.r: Updated * inst/unitTests/runit.RcppVector.R: added test for NA/NaN * inst/unitTests/runit.RcppMatrix.R: idem 2010-02-06 Romain Francois * src/Rcpp/RObject.h : asFoo methods are deprecated. * src/Rcpp/DottedPair.h : using R_len_t instead of int to anticipate future changes in R * src/Rcpp/VectorBase.h: idem * src/DottedPair.cpp: idem * src/VectorBase.cpp: idem * src/as.cpp: idem * src/Rcpp/SimpleVector.h: SimpleVector is now only parameterized by the SEXP type. The c type is automatically retrieved using the storage_type trait class. 2010-02-05 Dirk Eddelbuettel * inst/THANKS: Added in order to show our appreciation 2010-02-04 Romain Francois * src/Rcpp/DottedPair.h: code bloat to allow creation of DottedPair containing up to 5 objects without variadic templates RInside for example needs this. * src/Rcpp/Language.h: same * src/Rcpp/Pairlist.h: same * src/Rcpp/grow.h: same * src/Rcpp/internal/wrap.h : one more level of dispatch to identify if there needs a cast between the primitive iterated over and the target storage type. For example size_t needs a cast to be stored in an integer vector. This will be useful for the RProtoBuf package with e.g. types like google::protobuf::int64 which needs to be cast to double. Consequently the special handling of bool has been withdrawn as bool can now be assimilated to a primitive type that does require casting (to int) 2010-02-03 Romain Francois * src/Rcpp/VectorBase.h: VectorBase gains a names method that uses the proxy pattern to get or set the names of a vector * src/Rcpp/DottedPair.h: DottedPair gains a << operator to add an object to the queue of the list. this is much useful when variadic templates are not available * src/Rcpp/RObject.h: support for slot assignment. The slot method now uses the proxy pattern. * inst/unitTests/runit.S4.R: unit test for slot assignment 2010-02-02 Romain Francois * src/internal/r_coerce.h : coercion is now handled by a templated function r_coerce, for example r_coerce takes an int, performs coercion and returns a double * src/traits/has_iterator.h : introduce a trait that uses the SFINAE idiom to check if a class T has a nested type called "iterator". This helps wrap dispatch which now uses the range based wrap implementation in that case * src/Rcpp/wrap.h: The range based wrap function is exposed at the Rcpp:: level. The interface is wrap( InputIterator first, InputIterator last ) and dispatch is performed internally using iterator traits 2010-02-01 Romain Francois * src/traits/wrap_type_traits.h: new namespace Rcpp::traits:: to host Rcpp type traits used by the template meta programming dispatching of wrap 2010-01-31 Dirk Eddelbuettel * doxyfile: several updates plus improvements related to examples/ * src/RcppDoxygenExamples.h: A phony empty file needed mainly to define a few \example tags for Doxygen 2010-01-31 Romain Francois * src/Rcpp/internal/wrap.h: more wrap for stl templates are candidate for wrap (when T can be wrapped) std::list -> vector or list std::multiset -> vector or list std::map -> named vector or named list std::multimap -> named vector or named list std::tr1::unordered_map -> named vector or named list std::tr1::unordered_set -> vector or list std::tr1::unordered_multiset -> vector or list * inst/unitTests/runit.wrap.R : unit tests for the new wrappable types 2010-01-30 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.4 * debian/*: Similarly updated for new release to Debian * inst/unitTests/runit.RcppMatrix.R: also test STL return * inst/unitTests/runit.RcppVector.R: added 2010-01-30 Romain Francois * src/Rcpp/internal/wrap.h: rework wrap using traits and template meta programming. wrap is now really a template and has many generated specializations. This file is a private header and should only be included by RcppCommon.h * src/Rcpp/Language.h: Language gains Function aware constructors and eval methods 2010-01-28 Romain Francois * src/Rcpp/DottedPair.h: DottedPair::Proxy are no more lazy, i.e traversal of the pair list happens at construction time, so that the proxy can be created once and used many times more efficiently. * src/Rcpp/DottedPair.h: Pairlist and Language are now derived from the new virtual class DottedPair since both class were almost identical * src/Rcpp/SimpleVector.h: simple vectors gain a range based assign method and a range based assign constructor * inst/unitTests/runit.IntegerVector.R: new unit test test.IntegerVector.range.constructors * src/Rcpp/Dimension.h: new class Rcpp::Dimension to support creation of vectors with dimensions * src/Rcpp/*Vector.h: using Rcpp::Dimension * src/Rcpp/SimpleVector.h: data is initialized with 0 when the object is constructed from size or Dimension constructor * inst/unitTestsrunit.CharacterVector.R: new unit test to test constructors using Dimension * inst/unitTests/runit.IntegerVector.R: idem * inst/unitTests/runit.GenericVector.R: idem * R/unit.tests.R: new unexported function "test" to trigger unit tests using installed test cases * src/Rcpp/CharacterVector.h: minor bug fix in assign * inst/unitTest/runit.RcppResultSet.R: compare time using as.numeric to avoid timezone problems 2010-01-27 Dirk Eddelbuettel * inst/unitTests/runit.RcppMatrix.R: added * inst/unitTests/runit.RcppMatrixView.R: added * inst/unitTests/runit.RcppVector.R: added * inst/unitTests/runit.RcppVectorView.R: added 2010-01-27 Romain Francois * src/Rcpp/CharacterVector.h: CharacterVector gains a default constructor * src/Rcpp/CharacterVector.h: CharacterVector gains range constructors and range based assign methods facilitating construction from iterators * inst/unitTests/runit.CharacterVector.R: unit tests for assign and range based constructors * src/Rcpp/CharacterVector.h: CharacterVector::StringProxy gets a printing operator <<(std::ostream& ) * src/Rcpp/Environment.h: removed the static Environment::RCPP_NAMESPACE which caused problems when embedding R * src/Rcpp/RObject.h: RObject::AttributeProxy::operator RObject replaced by templated implicit conversion operator, delegating the actual work to as<>. * src/Environment.h: Binding::operator RObject is removed since it can be automatically generated by the templated implicit conversion operator * man/RcpUnitTests.Rd: fix html rendering * inst/doc/Makefile: clean the index.html file before copying it 2010-01-26 Dirk Eddelbuettel * src/RcppDatetime.cpp: New SEXP-based constructor * src/RcppDatetime.h: idem, bug fix for operator- * src/RcppDate.h: new accessor getJulian() [relative to epoch just like R's julian()] to complement getJDN() * inst/unitTests/runit.RcppDatetime.R: added 2010-01-26 Romain Francois * src/Rcpp/clone.h: explicit cloning of RObjects. The clone template function creates a new object of the same class as the object it is passed in, encapsulating a duplicate of the SEXP contained by the input RObject. * src/Rcpp/r_cast.h: new template function to handle casts from one SEXP to another. This is mostly useful internally * src/Rcpp/VectorBase.h: VectorBase gains a offset method that is responsible to calculate the correct offset based on variable number of size_t arguments. currently the number of arguments can be 1 (vector indexing) and 2 (matrix indexing) but arbitrary number of arguments will be added later for arbitrary array-like indexing. * src/Rcpp/SimpleVector.h: outsourcing offset calculation to VectorBase::offset * src/Rcpp/CharacterVector.h: use offset to implement matrix-like indexing for matrices of strings * inst/unitTests/runit.CharacterVector.R: unit test for matrix indexing (test.CharacterVector.matrix.indexing) * inst/Rcpp/SEXP_Vector.h: use offset to implement matrix like indexing on lists * inst/unitTests/runit.GenericVector.R: unit test for matrix indexing (test.List.matrix.indexing) 2010-01-26 Dirk Eddelbuettel * inst/unitTests/runit.RcppDate.R: added 2010-01-25 Romain Francois * src/Rcpp/wrap.h: wrap is back at being a template. The template parameter T is first converted to SEXP implicitely and the wrap(SEXP) method is used. This allows clients to only have to implement an implicit conversion to SEXP operator for their class and have wrap for free. * src/Rcpp/SEXP_Vector.h: factored out ExpressionVector and GenericVector into a templated SEXP_Vector class parameterized by the SEXP type (VECSXP or EXPRSXP). GenericVector and ExpressionVector now are generated from the template. This will ease adding features to both classes. * src/as.cpp: also use coercion for as, as, as as (FR #768) * src/Rcpp/as.h: smarter template as, now the template attempts to create an object by passing the SEXP as the first parameter, so any class that has a constructor taking a SEXP can be as<>'ed. see item below for how this can be useful * src/Rcpp/Environment.h: lhs use of Environment::Binding is now a bit smarter and uses as<> to implicitely convert the SEXP to the requested type, so that if as makes sense, this works: Foo foo = env["x"] ; * src/Rcpp/Environment.h: Environment::assign gains a templated form so that we can assign anything that can be wrapped to a name in an environment. * inst/unitTests/runit.environments.R: new unit test 'test.environment.assign.templated' to test the templated assign * src/Makevars(.win?): listen to the RCPP_CXX0X environment variable and if set to "yes" attempt to add c++0x support if possible 2010-01-24 Dirk Eddelbuettel * configure.in: Withdrawn as OS X universal binaries are only built when there is src/Makevars and neither src/Makefile nor configure * configure: idem * src/Makevars: Again a static file, content copied from Makevars.in, -std=c++0x selection back to simply unabling a comment 2010-01-24 Romain Francois * src/SimpleVector.h : new template to replace simple vector classes. now NumericVector, IntegerVector, LogicalVector, ComplexVector and RawVector are all generated from the same template class. A first attempt at matrix indexing is added as part of this. * inst/unitTests/runit.NumericVector.R: new unit tests about matrix indexing * src/Rcpp/VectorBase.h: added the exception not_a_matrix that is thrown when attempting to perform matrix indexing on a vector that is not a matrix. 2010-01-23 Dirk Eddelbuettel * inst/unitTests/runit.RcppParams.R: added * inst/unitTests/runit.RcppResultSet.R: added 2010-01-23 Romain Francois * src/wrap.cpp: s/copy/std::copy/ * src/RcppDateTime.h: explicitely include (win64 warning) 2010-01-22 Romain Francois * src/Makevars.win: disable c++0x entirely (for now) * src/Rcpp/Environment.h: make sure what() is const. (suncc finding) * src/RcppCommon.h: pre declare classes, as an attempt to deal with the suncc warning "RObject may not have a type qualifier." * src/Rcpp/*.h: make sure RcppCommon.h is the first included header * src/*cpp: make sure foo.cpp only include Rcpp/foo.h * src/Environment.cpp: use Evaluator instead of R_ToplevelExec * src/RcppFunction.{h,cpp}: listen to some suncc warnings * src/RcppFrame.cpp: listen to some suncc warnings * src/as.cpp: use transform instead of assign, which should make the code more portable (particularly suncc) and also deal with coercion 2010-01-21 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.3 * debian/*: Similarly updated for new release to Debian * INDEX: updated * configure.in: Some more small cleanups * inst/skeleton/Makevars.win: Add missing default file 2010-01-21 Romain Francois * configure.in: Some small cleanups, add RCPP_CXX0X env var 2010-01-20 Romain Francois * src/*: make update private virtual in RObject and couple it with setSEXP so that it gets called automatically, instead of manually * src/*: move more code depending on c++0x from cpp files to header files 2010-01-20 Dirk Eddelbuettel * configure.in: Detect C++ capabilties (via g++ major/minor) via small C++ program embedded in autoconf macro 2010-01-19 Romain Francois * configure.in: use the cxx0x.R script to discover if the compiler being used is c++0x capable * configure: regenerated from updated configure.in * src/Makevars.in: using CLINK_CPPFLAGS variable * src/Makevars.win: using CLINK_CPPFLAGS variable with the cxx0x.R discovery script 2010-01-18 Dirk Eddelbuettel * R/RcppLdpath.R: Rewrote logic for LdFlags() to decide when linking is static: default now is everywhere but Linux, and choices can be overriden as before 2010-01-18 Romain Francois * inst/discovery/cxx0x.R: replaces the cxx0x.c file to take care of compiling, etc... 2010-01-17 Romain Francois * src/exceptions.cpp: slightly less dumb exception logic on non GCC compilers. exceptions will now trigger an R error with a default message (we don't attempt to get the exception class or message because we don't know how to) * src/Rcpp/Pairlist.h: Pairlist lacked a default constructor which is needed when the variadic templates are not available * inst/unitTests/*: add -std=c++0x in inline when necessary * R/RcppLdPath.R : new script RcppCxx0xFlags() and Cxx0xFlags() that compile, load and call a simple C file in order to check the compiler version and add the -std=c++0x flag * inst/discovery/cxx0x.c: discovery script. simple C script that returns "-std=c++0x" if it is compiled with GCC >= 4.3 and "" otherwise 2010-01-16 Dirk Eddelbuettel * src/Rcpp/*h: call Rf_length() etc as ::Rf_length() to ensure we get the one from the top-level namespace 2010-01-16 Romain Francois * src/Rcpp/Environment.h: Environment gains a new_child method to create an environment enclosed by this * inst/unitTests/runit.environments.R: unit test for new_child * src/Rcpp/ExpressionVector.h: ExpressionVector gains a convenience methods eval to evaluate itself * inst/unitTests/runit.ExpressionVector.R: added unit tests for ExpressionVector::eval * src/Rcpp/ExpressionVector.h: ExpressionVector gains a constructor ExpressionVector( const std::string& ) that parses the string as R code * inst/unitTests/runit.ExpressionVector.R: added unit tests to cover the new constructor * src/Rcpp/Environment.h : the Rcpp namespace is cached because we use it in many places and retrieving it is an "expensive" operation that requires a round trip to the R side * src/Evaluator.cpp: use the cached Rcpp namespace * R/Rcpp.package.skeleton: now generating example C++ and R code that uses Rcpp, also the generated Makevars contains a hack so that the generated package can pass check (after edition of Rd files, NAMESPACE, etc ...) * inst/skeleton: added example code used by the skeleton generator 2010-01-15 Romain Francois * src/Rcpp/NumericVector.h: cache the start of the array to improve performance of operator[] * src/NumericVector.cpp: idem * src/Rcpp/IntegerVector.h: * src/Rcpp/RawVector.h: * src/Rcpp/ComplexVector.h: * src/Rcpp/LogicalVector.h: idem * src/IntegerVector.cpp: * src/RawVector.cpp: * src/ComplexVector.cpp: * src/LogicalVector.cpp: idem 2010-01-13 Romain Francois * R/cpp.package.skeleton.R: new function cpp.package.skeleton to extend the code generation performed by package.skeleton to Rcpp features * man/cpp.package.skeleton.Rd: documentation for cpp.package.skeleton * src/Rcpp/VectorBase.h: new virtual class Rcpp::VectorBase to manage common things of all vectors (length, names, etc ...) all Vector classes now derive from VectorBase * src/Rcpp/Environment.h: Environment::Binding gains a templated conversion operator, to facilitate distance 2 implicit conversion making this possible: Environment env("package:stats") ; Function f = env["rnorm"] ; * src/Rcpp/GenericVector.h: GenericVector::Proxy gains an assignement operator to deal with Environment::Binding. This is to work around distance 1 implicit conversion restrictions * src/Rcpp/NumericVector.h: operator[], begin and end are promoted to inline member functions * src/Rcpp/IntegerVector.h: idem * src/Rcpp/RawVector.h: idem * src/Rcpp/LogicalVector.h: idem 2010-01-12 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.2 * debian/*: Similarly updated for new release to Debian * .Rbuildignore: Add 'inst/doc/{html,latex,man} as we no longer ship the voluminous doxygen-generated content * inst/doc/examples/ConvolveBenchmarks/convolve2*: Added simple benchmark on the well-known vector convolution example from 'Writing R Extensions' to compare C and C++ implementations * inst/doc/examples/ConvolveBenchmarks/buildAndRun.sh: idem inst/doc/examples/ConvolveBenchmarks/exampleRCode.r: idem 2010-01-12 Romain Francois * inst/doc/examples/ConvolveBenchmarks/convolve2*: Added additional C++ examples to convolution benchmark highlighting performance gains 2010-01-11 Romain Francois * src/Rcpp/CharacterVector.h: StringProxy gains operator+= * src/CharacterVector.cpp: implementation * src/Rcpp/*Vector.h: operator[] now throws index out of bounds exception when needed (FR#770) * src/*Vector.cpp: same * src/Rcpp/Environment.h: operator[](string) for environment allowing to get/set values of a binding in this environment. The Environment::Binding class has been created to act as a proxy. * src/Environment.cpp: idem * inst/unitTests/runit.environments.R: unit tests for the above 2010-01-10 Romain Francois * src/Rcpp/Pairlist.h: operator[] for pairlist using proxies * src/Pairlist.cpp : idem * inst/unitTests/runit.Pairlist.R: new unit tests * src/Rcpp/Language.h: same for Language * src/Language.cpp : idem * inst/unitTests/runit.Language.R: new unit tests * inst/unitTests/runit.Function.R: added unit test for function throwing exceptions * src/Function.cpp: grab the condition message and not the call 2010-01-09 Romain Francois * src/Rcpp/RObject.h: attr can now be used to get or set the attribute (used to be read only). This is another manifestation of the proxy pattern. The rhs can be anything wrap can handle * inst/unitTests/runit.RObject.R: added test.RObject.attr.set unit test (setting attribute). * src/Rcpp/Function.h: Function::operator() now throws an exception if an R error occurs. 2010-01-08 Dirk Eddelbuettel * configure.in: provide basic support for c++ compiler version detection at build-time so that we can add -std=c++0x when applicable; provide defaults in case we do not use g++ * src/Makevars.in: copied from Makevars, set C++ flags from configure * configure.win: simply log what g++ version is being used 2010-01-08 Romain Francois * src/Rcpp/wrap.h: added wrap( size_t ) to disambiguate it * int/unitTests/runit.XPTr.R: forgot to set the finalizer on the external pointer * src/Rcpp/Pairlist.h: Pairlist gains a push_back, replace, length, size, remove and insert methods * src/Rcpp/Language.h: idem for Language 2010-01-07 Romain Francois * src/Rcpp/Pairlist.h: gains a push_front method * src/Rcpp/wrap.h : now the result type of the various wrap functions depends on the parameters. wrap( bool ) makes a LogicalVector, etc ... wrap(SEXP) dispatches to the appropriate Rcpp:: class depending on TYPEOF * src/Rcpp/RObject.h: added methods "isS4", "slot" and "hasSlot" to deal with S4 objects * inst/unitTests/runit.S4.R: unit tests * src/Rcpp/ComplexVector.h: new class Rcpp::ComplexVector to manage ... complex vectors (CPLXSXP) * src/ComplexVector.cpp: implementation * inst/unitTests/runit.ComplexVector.R: unit tests * src/Rcpp/Promise.h: new class Rcpp::Promise to manage promises (PROMSXP). only read access so far (no way to force the promise) * src/Promise.cpp: implementation * src/Rcpp/RObject.h: the result of attr is now an RObject rather than a SEXP. This does not change previous behavior because of the implicit conversion * src/Rcpp/ExpressionVector.h: new class Rcpp::ExpressionVector which shares a lot with GenericVector. * src/ExpressionVector.cpp: implementation * inst/unitTests/runit.ExpressionVector.R: unit tests * src/Rcpp/CharacterVector.h: new class Rcpp::CharacterVector to manage character vectors (STRSXP). StringVector is a convenience typedef equivalent to CharacterVector * src/CharacterVector.cpp: implementation * inst/unitTests/runit.CharacterVector.R: unit tests * src/Rcpp/WeakReference.h: new class Rcpp::WeakReference to wrap WEAKREFSXP with accessors to the key and value * src/WeakReference.cpp: implementation * src/Rcpp/Rcpp_Rinternals.h: borrowed from Rinternals so that we can use VECTOR_PTR (which R forbids unless we define USE_RINTERNALS, but defining it disables NO_R_REMAP) * src/Rcpp/GenericVector.h : added begin and end to allow stl type iteration over generic vectors. Now using the Proxy pattern (from Item 30 of More Effective C++) to allow getting and setting the elements of the list through the operator[]. * int/unitTests/runit.GenericVector.R: examples are reworked using [] where set and get were used. 2010-01-06 Dirk Eddelbuettel * src/RcppCommon.h: Protect definition of logTxt by #ifndef * inst/doc/Rcpp-unitTests.Rnw: Minor LaTeX tweak 2010-01-06 Romain Francois * src/Rcpp/wrap.h : wrap can now use initializer lists (available on on GCC >= 4.4). * src/wrap.cpp: implementation * int/unitTests/runit.wrap.R: unit tests * src/RObject.cpp : make methods RObject::asFoo calling Rcpp::as to avoid code duplication 2010-01-05 Romain Francois * src/Rcpp/GenericVector.h : new class Rcpp::GenericVector and an alias Rcpp::List to handle lists (VECSXP), aka generic vectors * src/GenericVector.cpp : implementation * inst/unitTests/runit.GenericVector.R: unit tests * src/Rcpp/IntegerVector.h : new class Rcpp::IntegerVector to manage integer vector (INTSXP). IntegerVector can be constructed from SEXP of appropriate type, from an int which simply allocates a vector that big, or using an initialization list (the last is GCC >= 4.4 only). Additionally IntegerVector defines begin() and end() so that they can be used in STL algorithms * src/IntegerVector.cpp : implementation * inst/unitTests/runit.IntegerVector.R: unit tests * src/Rcpp/NumericVector.h : same as above, but for numeric vectors (REALSXP) * src/NumericVector.cpp : implementation * inst/unitTests/runit.NumericVector.R: unit tests * src/Rcpp/RawVector.h : same as above, but for numeric vectors (RAWSXP) * src/RawVector.cpp : implementation * inst/unitTests/runit.RawVector.R: unit tests * src/Rcpp/LogicalVector.h : same as above, but for numeric vectors (RAWSXP) * src/LogicalVector.cpp : implementation * inst/unitTests/runit.LogicalVector.R: unit tests * src/RcppCommon.h: improve the conditional compiling logic with macros HAS_VARIADIC_TEMPLATES and HAS_INIT_LISTS instead of CXX0X. This ensures the package can be compiled with older GCC, with lower functionality * src/RcppCommon.{h,cpp}: added a capabilities function that can be used to bring the result of the two above macros to R * R/RcppLdPaths.R: added unexported function RcppCapabilities to call the internal capabilities. capabilities is an alias to RcppCapabilities so that we can call Rcpp::capabilities() 2010-01-04 Romain Francois * src/Rcpp/Function.h: new class Rcpp::Function to manage functions (closures, primitives and builtins) all share the Function class (at least for now). This is implemented as a functor taking variable number of arguments, so it looks pretty similar to the R function * src/Function.cpp: implementation * inst/unitTests/runit.Function.R: unit tests * src/Rcpp/Pairlist.h: new class Rcpp::Pairlist to manage dotted pair lists (LISTSXP). unsurprisingly this shares a lot of similarities with Language class * src/Pairlist.cpp: implementation * inst/unitTests/runit.Pairlist.R: unit tests for Rcpp::Pairlist * src/Rcpp/wrap.h: wrap no more a template. this was not a good idea as it prevented implicit conversion to SEXP behavior when wrap'ing a RObject. * src/Rcpp/Environment.h: added the remove method * src/unitTests/runit.environments.R: remove unit test * src/unitTests/runit.Language.R: remove verbose=TRUE in cfunction call (generated noise) * src/wrap.cpp: added a few missing PROTECT 2010-01-04 Dirk Eddelbuettel * src/excections.cpp: Get rid of another unused variable * src/RcppCommon.cpp: Idem 2010-01-03 Romain Francois * src/Rcpp/Environment.h: Environment gains the parent method that returns the parent environment * src/Rcpp/as.h: template as<> to convert SEXP to classic C++ types, factored out of RObject * src/as.cpp: specific implementations. as, as as, ... * inst/unitTests/runit.as.R: unit tests * src/Rcpp/wrap.h : factored out from RObject. there is now a template wrap in addition to the specific implementations. The template generates a warning and return NULL * src/wrap.cpp: specific implementations of the wrap template (factored out of RObject) * src/Rcpp/pairlist.h : variadic templates to recursively generate a pairlist (CAR and CDR) from any number of "wrap("'able objects. (factored out of Language) * src/pairlist.cpp: end of recursion for the above * src/Rcpp/grow.h : grow a pairlist with any wrappable object. Used in pairlist * src/grow.cpp : specific implementation for Named object to allow tagging the head of the pairlist. * src/Rcpp/Named.h : new class Named that is used to specify named elements in a pairlist. * src/Named.cpp: implementation * src/Rcpp/RObject.h: added wrap(const char* const) RObject factory method * src/Rcpp/RObject.h: rework the garbage collection mechanism so that it is automatic and hidden. methods preserve and release are now private to the RObject class and the SEXP may only be changed using the protected setSEXP member function. isPreserved and forgetPreserve are defunct. * src/Rcpp/RObject.h: RObject gains assignment operators and copy constructors * src/RcppCommon.h: added the CXX0X define that controls whether we can use C++0x features offered by the gcc. currently the define is hardcoded, but this will eventually be a configure guess. The canUseCXX0X function can be called to bring this back to R * R/RcppLdPath.R: added the canUseCXX0X R function to query the internal canUseCXX0X function, use this in RcppCxxFlags so that code linking against Rcpp (inline code or packages) can take advantage of it * src/Rcpp/Language.h : new class Rcpp::Language to manage calls (LANGSXP SEXP) * src/Language.cpp : implementation * inst/unitTests/runit.Language.R: unit tests * src/Rcpp/Environment.h : added constructors and made the SEXP based constructor smarter (using as.environment) * inst/unitTests/runit.environments.R: more unit tests * src/Rcpp/Symbol.h: new class Rcpp::Symbol to encapsulate symbols. This allows to use Symbol("rnorm") instead of the most cryptic Rf_install("rnorm") * src/Symbol.cpp: implementation * inst/unitTests/runit.Symbol.R: unit tests 2010-01-03 Dirk Eddelbuettel * doxyfile: updated to current doxygen standard using -u 2010-01-02 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.1 * debian/*: Similarly updated for new release to Debian 2010-01-02 Romain Francois * pkg/src/RcppSexp.h: Added to preserve existing interface, implementation use the redesigned class src/RObject.h 2010-01-01 Romain Francois * pkg/src/Rcpp/RObject.h: RObject::RObject constructors are replaced by the Rcpp::wrap set of functions. Currently the wrap functions make a RObject object but it is likely that as new classes become available in the new API, wrap will return instances of classes that extend RObject. * pkg/src/Rcpp/RObject.h: s/protect/preserve/, added methods isPreserved and forgetPreserve * ** : adapted examples, code, and unit tests to reflect both above items 2009-12-31 Romain Francois * src/Rcpp/Evaluator.h : new class Rcpp::Evaluator that eases evaluation of R expression with error capture. so that we can for example throw C++ exceptions * src/Evaluator.cpp : implementation of Rcpp::Evaluator * inst/unitTests/runit.evaluator: unit tests of Rcpp::Evaluator * inst/Rcpp/RObject.h: RObject::RObject(SEXP) now initializes isProtected * inst/src/Environment.cpp: use of exceptions 2009-12-30 Romain Francois * src/Rcpp/Environment.h : added support for environment through the Rcpp::Environment class * src/Environment.cpp: idem * inst/unitTests/runit.environments.R: testing the above * src/RcppCommon.h: now includes , needed for the environment support 2009-12-30 Romain Francois * src/Makevars* : adapt for allowong copy of the Rcpp directory * src/Rcpp_RObject.h: replace by src/Rcpp/RObject.h * src/Rcpp_XPtr.h: replaced by src/Rcpp/XPtr.h * src/*.cpp: adapt to the Rcpp directory * cleanup: idem 2009-12-30 Romain Francois * inst/unitTests/runit.RObject.R: new unit tests * inst/unitTests/runit.exceptions.R: idem * inst/unitTests/runit.XPtr.R: idem * man/RcppUnitTests.Rd: shows and link unit test reports generated at build time 2009-12-29 Romain Francois * src/Rcpp_RObject.{h,cpp}: new namespace Rcpp and new class Rcpp::RObject to replace RcppSexp with the same functionality. * src/Rcpp_XPtr.h: replaces RcppXPtr.h and the class is now Rcpp::XPtr<> and extends Rcpp::RObject * inst/examples/RcppInline/external_pointer.r: use the new namespace * inst/examples/RcppInline/RcppInlineWithLibsExamples.r: idem * inst/examples/RcppInline/RcppSexpTests.r: idem * DESCRIPTION: marked as version 0.7.0.5 * inst/doc/*: fake (empty) vignette and unit test trigger * inst/unitTests/*: prepare the space for unit tests * tests/doRUnit.R : added the usual RUnit tests trigger 2009-12-29 Romain Francois * src/RcppXPtr.h: now RcppXPtr extends RcppSexp and RcppSexp manages garbarge collection, attributes, etc ... * src/exceptions.cpp: replaces src/exception_handling.cpp * DESCRIPTION: now suggesting RUnit. 2009-12-29 Romain Francois * src/RcppXPtr.h: added operator SEXP() to class RcppXPtr to ease implicit conversion from RcppXPtr to SEXP. This means we can directly return the RcppXPtr object to R when the return type of the function is SEXP. (no need to explicitely call asSexp anymore) * src/RcppSexp.{h,cpp} : idem 2009-12-29 Romain Francois * src/RcppXPtr.h: new smart external pointer wrapper. The RcppXPtr template can be used to wrap a external pointer (SEXP) so that it looks like the dumb pointer it is wrapping (as far as the * and -> operator are concerned). The template parameter controls the type of object that is wrapped by the pointer. * src/Rcpp.h: importing the RcppXPtr.h header * src/RcppExample.cpp: added an example of RcppXPtr usage * inst/examples/RcppInline/external_pointer.r: added example using the RcppXPtr template * DESCRIPTION: marking this as 0.7.0.4 2009-12-28 Romain Francois * R/exceptions.R: s/uncaught_cpp_exception/cpp_exception/ and added a 'class' argument to hold the class name of the C++ exception (range_error, etc ...) * inst/examples/RcppInline/UncaughtExceptions.r: extend examples to show how to grab details of the C++ exception * src/exception_handling.cpp: factored out from RcppCommon.cpp, now able to grab the class name of the exception and its message. 2009-12-27 Dirk Eddelbuettel * R/RcppInline.R: Removed as we now use cfunction() from inline (>= 0.3.4) * man/{RcppInline,internals}.Rd: idem * NAMESPACE: removed entries related to cfunction and methods * DESCRIPTION: Added 'Suggests: inline (>= 0.3.4) * inst/examples/RcppInline/*R: Add library(inline) or require(inline) 2009-12-27 Romain Francois * src/RcppCommon.{h,cpp} : added experimental uncaught exception management * R/zzz.R : added .onAttach, used to register the uncaught exception management on package attach * R/exceptions.R : added R side of the exception management, unexported as it is only used by internal C++ code * inst/examples/RcppInline/UncaughtExceptions.r: demo of the uncaught exception system * src/RcppSexp.{h,cpp} : added method isNULL to test if the underlying SEXP is NULL * src/RcppSexp.{h,cpp} : added some methods to deal with attributes attributeNames : the names of the attributes as a vector hasAttribute : test whether the SEXP has the given attribute attr : extract the attribute (might return NULL) * src/RcppSexp.{h,cpp} : added RcppSexp(bool), RcppSexp(vector) constructors and RcppSexp.asBool(), RcppSexp.asStdVectorBool() methods * inst/examples/RcppInline/RcppSexpTests.r: examples/tests of the above items 2009-12-26 Romain Francois * src/RcppSexp.{h,cpp} : added std::set<{int,double,Rbyte,string}> as accepted input type for the RcppSexp class (needed by RProtoBuf) * inst/examples/RcppInline/RcppSexpTests.r: examples/tests of the above 2009-12-21 Romain Francois * src/RcppSexp.{h,cpp} : support for raw vector added into RcppSexp * inst/examples/RcppInline/RcppSexpTests.r: examples of raw vector support 2009-12-20 Dirk Eddelbuettel * inst/examples/RcppInline/RcppInlineWithLibsExamples.r: Minor simplifications using new RcppSexp types, added third example 2009-12-19 Dirk Eddelbuettel * DESCRIPTION: Release 0.7.0 * DESCRIPTION: Descrition fields reworded and expanded to explicitly mention 'inlining' ability as well as simple SEXP support. * src/RcppSexp.{h,cpp}: Switch to R_PreserveObject and R_ReleaseObject with a big thanks to Romain for the most appropriate suggestion * src/RcppSexp.{h,cpp}: Added converters for vectors of int, double, and std::string vectors * src/RcppResultsSetp.{h,cpp}: Added simple single SEXP return * src/RcppCommon.{h,cpp}: Adding simple logging facility * inst/examples/RcppInline/RcppSexpTests.r: expanded for new types 2009-12-18 Dirk Eddelbuettel * R/RcppInline.R: Another improvement for Rcpp use * inst/examples/RcppInline/RcppSimpleExamples.r: Another simple case 2009-12-17 Dirk Eddelbuettel * R/RcppInline.R: Improved / simplified in light of getting it to work on Windoze too so switched to setting env var explicitly; also split into three args for CPPFLAGS, CXXFLAGS and LIBS * man/RcppInline.Rd: Updated accordingly to reflect new args * inst/examples/RcppInline/RcppInlineWithLibsExamples.r: Idem 2009-12-16 Dirk Eddelbuettel * src/RcppSexp.{h,cpp}: Added simple RcppSexp class for simple conversion from and to single-element SEXPs -- currently limited to int, double, std::string * inst/examples/RcppInline/RcppSexpTests.r: Simple tests for this 2009-12-15 Dirk Eddelbuettel * DESCRIPTION: License changed to 'GPL (>= 2)' * COPYING: Changed from LGPL 2.1 to GPL 2 (or later) * src/*.{h,cpp}: Relicensed under GPL 2 (or later) 2009-12-13 Dirk Eddelbuettel * R/RcppInline.R: Extended to for additional header and library arguments so that we can work with arbitrary other projects * man/RcppInline.Rd: Added documentation for these arguments * inst/examples/RcppInline/RcppInlineWithLibsExamples.r: New examples using GNU GSL to show how to compile + link via inline 2009-12-11 Dirk Eddelbuettel * R/RcppInline.R: Imported function 'cfunction' from the inline package, along with small patch to directly support Rcpp. The inclusion may be temporary -- if our patch is integrated into inline we may just depend on that package * man/RcppInline.Rd: Imported from inline, plus change for Rcpp * inst/examples/RcppInline/RcppInlineExample.r: Small example taken from the 'Intro to HPC with R' tutorials * R/RcppVersion.R: Removed as unused as redundant given read.dcf() in R * man/RcppVersion.R: idem * NAMESPACE: updated accordingly * INDEX: idem 2009-11-18 Dirk Eddelbuettel * DESCRIPTION: Add Dominick back into Authors per his new request reversing his requests to be removed from last December 2009-11-17 Dirk Eddelbuettel * man/RcppParams.Rd: applied patch by Frank S. Thomas to fix example 2009-11-15 Dirk Eddelbuettel * src/RcppDateVector.{cpp,h}: Moved out of Rcpp.{h,cpp} * src/RcppDatetimeVector.{cpp,h}: idem * src/RcppFunction.{cpp,h}: idem * src/RcppMatrix.{cpp,h}: idem * src/RcppMatrixView.{cpp,h}: idem * src/RcppNumList.{cpp,h}: idem * src/RcppResultSet.{cpp,h}: idem * src/RcppStringVector.{cpp,h}: idem * src/RcppStringVectorView.{cpp,h}: idem * src/RcppVector.{cpp,h}: idem * src/RcppVectorView.{cpp,h}: idem * src/RcppCommon.cpp: takes remaining utility function from Rcpp.cpp 2009-11-09 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.8 * src/RcppParams.{cpp,h}: Code reorginsation, moved out of Rcpp.{h,cpp} * src/RcppDate.{cpp,h}: idem * src/RcppDatetime.{cpp,h}: idem * src/RcppCommon.h: New header file for common defines and includes * src/Makevars{,.win}: Updated and generalised to reflect new files 2009-11-08 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.7 * man/RcppVector.Rd: Remove erraneous use of \R in \title{} section noticed by the Rd parser in R-devel (with thanks to Kurt Hornik) 2009-11-06 Dirk Eddelbuettel * src/RcppList.{h,cpp}: Added a simple class to accept list() objects in order to cope with non-rectangular data-types -- this comes from the RProtoBuf code currently only on r-forge where we need accept lists that are potentially nested. The API for RcppList is not fully fleshed out and needs a few more append() member functions. Also length is currently fixed. * cleanup: Change header file removal to Rcpp*.h * inst/README: Added short README about history and status * inst/doc/: Updated doxygen documentation 2009-09-29 Dirk Eddelbuettel * inst/examples/functionCallback/*: Added simple C++ / R example of defining an R function that is passed to and called from C++ 2009-08-03 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.6 * src/Rcpp.{h,cpp}: Added exists() method for RcppParams to test for existence of a named parameter. * inst/doc/: Updated doxygen documentation 2009-04-01 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.5 * COPYING: Added 2009-03-30 Dirk Eddelbuettel * src/Makevars: Add $(R_ARCH) to target directory path when copying the header file as an OS X user reported not finding it with default settings. 2009-03-01 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.4 * .Rbuildignore: Added to exclude debian/ from source tarball 2009-02-25 Dirk Eddelbuettel * src/Makevars.win: Renamed from Makefile.win, added missing mkdir * cleanup: Remove a few more Windows files 2009-02-24 Dirk Eddelbuettel * inst/doc/{html,latex,man}: Added new documentation of the C++ classes * doxyfile: Added Doxygen configuration file for doc generation 2009-02-22 Dirk Eddelbuettel * src/Rcpp.{h,cpp}: cleaner use of namespace 'std' by formal prefix rather than via 'using namespace std' * src/Rcpp.h: define R_NO_MAP and use Rf_* form of R API functions 2009-02-18 Dirk Eddelbuettel * src/Rcpp.{h,cpp}: Added a few explicit casts, and removed unused loop variable; all to make 'g++ -Wall' happy 2009-02-10 Dirk Eddelbuettel * src/Rcpp.{cpp,h}: Expanded a few of the throw() messages 2009-01-09 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.3 * R/RcppLdpath.R: Also defined shorter functions CxxFlags() and LdFlags() which cat() the longer forms RcppCxxFlags() and RcppLdFlags() to further simplify use via litter or Rscript in Makefile or Makevars * man/Rcpp-package.Rd: Mention short form CxxFlags() and LdFlags() * src/Makevars: Applied another build correction for OS X suggested by Simon Urbanek * src/Rcpp.{cpp,h}: Added 'view-only' classes RcppVectorView, RcppMatrixView and RcppStringVectorView contributed by David Reiss 2008-12-02 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.2 * R/RcppLdPath.R: Correct output for the default Linux case 2008-11-30 Dirk Eddelbuettel * DESCRIPTION: Release 0.6.1 * src/Makevars: Added, replacing src/Makefile: thanks to Simon for a rewrite that provides OS X support * src/Makefile: Retired * src/Makefile.win: Now build libRcpp.a instead of Rcpp.a * src/Rcpp.{cpp,h}: Removed #ifdef statements related to QuantLib and Date ops as we no longer need to split this off -- one build for all uses; also added another date offset for the difference between the Unix epoch of Jan 1, 1970 and what certain spreadsheets use (which is what QuantLib) follows. With this change, Rcpp is completely decoupled from QuantLib headers, yet can be used from QuantLib 0.2.10 or later. However, this also removes data conversion from R/Rcpp to QL as Rcpp no longer 'knows' QL. * R/RcppLdPath.R: Adds new functions RcppLdPath() to return lib/ directory path, and RcppLdFlags() to return arguments, including the optional rpath settings on Linux * R/RcppExample.R: Added new example 'RcppVectorExample()', extended default print method for examples * man/Rcpp-package.Rd: Expanded / updated documentation of package use when building other packages * cleanup: Removing static libraries too but do not remove src/Makevars 2008-11-05 Dirk Eddelbuettel * Release 0.6.0 * New maintainer * src/Makefile{,.win}: New files, including functionality from both configure and RcppSrc/Makefile; we now build two libraries, one for use by the package which also runs the example, and one for users to link against * src/Makevars.in: Removed * src/Rcpp.{cpp,h}: moved in from ../RcppSrc * src/Rcpp.{cpp,h}: Add new type RcppDatetime corresponding to POSIXct in with full support for microsecond time resolution between R and C++ * man/*: Several new manual pages added * configure{,.in,.win}: Removed as src/Makefile* can handle this more easily * DESCRIPTION: Minor cleanup and reformatting, Date: now uses svn:keyword Date property * NAMESPACE: Renamed RcppTemplateVersion to RcppVersion, deleted RcppDemo * demo/ directory removed as vignette("RcppAPI") is easier and more reliable to show vignette documentation * R/zzz.R: RcppTemplateDemo() removed, vignette("RcppAPI") is easier * man/RcppTemplateDemo.Rd removed as well * R/RcppExample.R: reindented, rewritten to set default arguments * R/RcppTemplateVersion.R: renamed to RcppVersion.R * man/RcppTemplateVersion.Rd: renamed to RcppVersion.Rd * RcppSrc/Rcpp.{cpp,h}: moved to src/ directory * RcppSrc/Makefile{,.win}: removed * inst/doc/RcppAPI.{Rnw,pdf}: Added footnote onto titlepage about how this document has not (yet) been updated along with the channges made