@prefix ilxtr: <http://uri.interlex.org/tgbugs/uris/readable/> .
@prefix NIFRID: <http://uri.neuinfo.org/nif/nifstd/readable/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .

<https://raw.githubusercontent.com/SciCrunch/NIF-Ontology/neurons/ttl/phenotypes.ttl> a owl:Ontology ;
    owl:imports <https://raw.githubusercontent.com/SciCrunch/NIF-Ontology/neurons/ttl/phenotype-core.ttl> ;
    rdfs:label "NIF Phenotypes" ;
    rdfs:comment "A taxonomy of phenotypes used to model biological types as collections of measurements." .

### Classes

ilxtr:AccommodatingSpikingPhenotype a owl:Class ;
    rdfs:label "Accommodating spiking phenotype" ;
    rdfs:subClassOf ilxtr:SpikingPhenotype ;
    owl:disjointWith ilxtr:NonAccommodatingSpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Accommodating spiking" .

ilxtr:ANSPopulationPhenotype a owl:Class ;
    rdfs:label "Autonomic nervous system population phenotype" ;
    rdfs:subClassOf ilxtr:CellPhenotype ;
    rdfs:comment "used to account for populations that are part of distinct autonomic nervous system subdivisions" ;
    skos:hiddenLabel "Autonomic nervous system population" .

ilxtr:AnteriorProjecting a owl:Class ;
    rdfs:label "Anterior projecting" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    rdfs:comment "projects in the anterior direction of the housing structure" ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Anterior projecting" .

ilxtr:ApicalDendritePhenotype a owl:Class ;
    rdfs:label "Apical dendrite phenotype" ;
    rdfs:subClassOf ilxtr:DendritePhenotype ;
    rdfs:comment "When used directly indicates the presence or absense of an apical dendrite. Rather than subclassing directly, could be combined with general dendrite phenotypes to allow specificity." ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Apical dendrite" .

ilxtr:AxonMorphologicalPhenotype a owl:Class ;
    rdfs:label "Axon morphological phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype .

ilxtr:AxonPhenotype a owl:Class ;
    rdfs:label "Axon phenotype" ;
    rdfs:subClassOf ilxtr:Phenotype ;
    ilxtr:useObjectProperty ilxtr:hasAxonPhenotype .

ilxtr:BasketPhenotype a owl:Class ;
    rdfs:label "Basket phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:BipolarPhenotype,
        ilxtr:BistratifiedPhenotype,
        ilxtr:BituftedPhenotype,
        ilxtr:ChandelierPhenotype,
        ilxtr:ConeMorphologicalPhenotype,
        ilxtr:DiscMorphologicalPhenotype,
        ilxtr:DoubleBouquetPhenotype,
        ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Basket" .

ilxtr:BiopolarPyramidalPhenotype a owl:Class ;
    rdfs:label "Biopolar pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    owl:disjointWith ilxtr:HorizontalPyramidalPhenotype,
        ilxtr:InvertedPyramidalPhenotype,
        ilxtr:NarrowPyramidalPhenotype,
        ilxtr:SmallPyramidalPhenotype,
        ilxtr:StarPyramidalPhenotype,
        ilxtr:TuftedPyramidalPhenotype,
        ilxtr:UntuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Biopolar pyramidal" .

ilxtr:BipolarPhenotype a owl:Class ;
    rdfs:label "Bipolar phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:BistratifiedPhenotype,
        ilxtr:BituftedPhenotype,
        ilxtr:ChandelierPhenotype,
        ilxtr:ConeMorphologicalPhenotype,
        ilxtr:DiscMorphologicalPhenotype,
        ilxtr:DoubleBouquetPhenotype,
        ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Bipolar" .

ilxtr:BistratifiedPhenotype a owl:Class ;
    rdfs:label "Bistratified phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:BituftedPhenotype,
        ilxtr:ChandelierPhenotype,
        ilxtr:ConeMorphologicalPhenotype,
        ilxtr:DiscMorphologicalPhenotype,
        ilxtr:DoubleBouquetPhenotype,
        ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Bistratified" .

ilxtr:BituftedPhenotype a owl:Class ;
    rdfs:label "Bitufted phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:ChandelierPhenotype,
        ilxtr:ConeMorphologicalPhenotype,
        ilxtr:DiscMorphologicalPhenotype,
        ilxtr:DoubleBouquetPhenotype,
        ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Bitufted" .

ilxtr:BranchingPhenotype a owl:Class ;
    rdfs:label "Branching phenotype" ;
    rdfs:subClassOf ilxtr:DendritePhenotype ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Branching" .

ilxtr:CellPhenotype a owl:Class ;
    rdfs:label "Cell phenotype" ;
    rdfs:subClassOf ilxtr:Phenotype .

ilxtr:ChandelierPhenotype a owl:Class ;
    rdfs:label "Chandelier phenotype" ;
    NIFRID:synonym "AxoAxonicPhenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:ConeMorphologicalPhenotype,
        ilxtr:DiscMorphologicalPhenotype,
        ilxtr:DoubleBouquetPhenotype,
        ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Chandelier" .

ilxtr:ConeMorphologicalPhenotype a owl:Class ;
    rdfs:label "Cone phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:DiscMorphologicalPhenotype,
        ilxtr:DoubleBouquetPhenotype,
        ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Cone" .

ilxtr:CorticoFugal a owl:Class ;
    rdfs:label "Cortico fugal" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Cortico fugal" .

ilxtr:CorticoPontine a owl:Class ;
    rdfs:label "Cortico pontine" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Cortico pontine" .

ilxtr:CorticoSpinal a owl:Class ;
    rdfs:label "Cortico spinal" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Cortico spinal" .

ilxtr:CorticoStriatal a owl:Class ;
    rdfs:label "Cortico striatal" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Cortico striatal" .

ilxtr:CorticoThalamic a owl:Class ;
    rdfs:label "Cortico thalamic" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Cortico thalamic" .

ilxtr:DendriteMorphologicalPhenotype a owl:Class ;
    rdfs:label "Dendrite morphological phenotype" ;
    rdfs:subClassOf ilxtr:DendritePhenotype .

ilxtr:DendritePhenotype a owl:Class ;
    rdfs:label "Dendrite phenotype" ;
    rdfs:subClassOf ilxtr:Phenotype ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype .

ilxtr:DenseAxonPhenotype a owl:Class ;
    rdfs:label "Dense axon phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasAxonMorphologicalPhenotype ;
    skos:hiddenLabel "Dense axon" .

ilxtr:DescendingAxonPhenotype a owl:Class ;
    rdfs:label "Descending axon phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasAxonMorphologicalPhenotype ;
    skos:hiddenLabel "Descending axon" .

ilxtr:DirectPathway a owl:Class ;
    rdfs:label "Direct pathway" ;
    rdfs:comment "Needs work" ;
    skos:hiddenLabel "Direct pathway" .

ilxtr:DiscMorphologicalPhenotype a owl:Class ;
    rdfs:label "Disc phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:DoubleBouquetPhenotype,
        ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Disc" .

ilxtr:DopaminergicPhenotype a owl:Class ;
    rdfs:label "Dopaminergic phenotype" ;
    rdfs:subClassOf ilxtr:ExpressionPhenotype ;
    rdfs:comment "figure out how to regularize these since I have used ilxtr:parvalbumin elsewhere, probably ilxtr:phenotype/thing will be best" ;
    ilxtr:useObjectProperty ilxtr:hasExpressionPhenotype ;
    skos:hiddenLabel "Dopaminergic" .

ilxtr:DoubleBouquetPhenotype a owl:Class ;
    rdfs:label "Double bouquet phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:GranulePhenotype,
        ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Double bouquet" .

ilxtr:EarlyBifurcatingPhenotype a owl:Class ;
    rdfs:label "Early bifurcating phenotype" ;
    rdfs:subClassOf ilxtr:BranchingPhenotype ;
    owl:disjointWith ilxtr:LateBifurcatingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Early bifurcating" .

ilxtr:EarlyBifurcatingThickTuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Early bifurcating thick tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:ThickTuftedPyramidalPhenotype ;
    owl:disjointWith ilxtr:LateBifurcatingThickTuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Early bifurcating thick tufted pyramidal" .

ilxtr:EarlyBifurcatingTuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Early bifurcating tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:TuftedPyramidalPhenotype ;
    owl:disjointWith ilxtr:LateBifurcatingTuftedPyramidalPhenotype,
        ilxtr:NarrowTuftedPyramidalPhenotype,
        ilxtr:SlenderTuftedPyramidalPhenotype,
        ilxtr:ThickTuftedPyramidalPhenotype ;
    rdfs:comment "we are not modelling dendrite phenotypes directly at the moment so we cant break about EB/LB" ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Early bifurcating tufted pyramidal" .

ilxtr:ElectrophysiologicalPhenotype a owl:Class ;
    rdfs:label "Electrophysiological phenotype" ;
    rdfs:subClassOf ilxtr:CellPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Electrophysiological" .

ilxtr:EntericPhenotype a owl:Class ;
    rdfs:label "Enteric phenotype" ;
    rdfs:subClassOf ilxtr:CellPhenotype ;
    skos:hiddenLabel "Enteric" .

ilxtr:ExpressionPhenotype a owl:Class ;
    rdfs:label "Expression phenotype" ;
    NIFRID:synonym "molecular phenotype" ;
    rdfs:subClassOf ilxtr:CellPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasExpressionPhenotype ;
    skos:hiddenLabel "Expression" .

ilxtr:FastSpikingPhenotype a owl:Class ;
    rdfs:label "Fast spiking phenotype" ;
    rdfs:subClassOf ilxtr:SpikingPhenotype ;
    owl:disjointWith ilxtr:RegularSpikingNonPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Fast spiking" .

ilxtr:GranulePhenotype a owl:Class ;
    rdfs:label "Granule phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:IvyPhenotype,
        ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Granule" .

ilxtr:HorizontalAxonPhenotype a owl:Class ;
    rdfs:label "Horizontal axon phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasAxonMorphologicalPhenotype ;
    skos:hiddenLabel "Horizontal axon" .

ilxtr:HorizontalPyramidalPhenotype a owl:Class ;
    rdfs:label "Horizontal pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    owl:disjointWith ilxtr:InvertedPyramidalPhenotype,
        ilxtr:NarrowPyramidalPhenotype,
        ilxtr:SmallPyramidalPhenotype,
        ilxtr:StarPyramidalPhenotype,
        ilxtr:TuftedPyramidalPhenotype,
        ilxtr:UntuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Horizontal pyramidal" .

ilxtr:InterneuronPhenotype a owl:Class ;
    rdfs:label "Interneuron phenotype" ;
    rdfs:subClassOf ilxtr:IntrinsicPhenotype ;
    rdfs:comment "this is the 'general' morphological phenotype that might be made up of soma/axon/dendrite" ;
    skos:hiddenLabel "Interneuron" .

ilxtr:IntestinoFugalProjectionPhenotype a owl:Class ;
    rdfs:label "Intestino fugal projection phenotype" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    rdfs:comment "projects out of the intestines" ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Intestino fugal projection" .

ilxtr:IntrinsicPhenotype a owl:Class ;
    rdfs:label "Intrinsic phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    rdfs:comment "local projections only? (define local) equivalent to LocalAxonOnly, is this an axon phenotype or an axon location phenotype?" ;
    skos:hiddenLabel "Intrinsic" .

ilxtr:InvertedPyramidalPhenotype a owl:Class ;
    rdfs:label "Inverted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    owl:disjointWith ilxtr:NarrowPyramidalPhenotype,
        ilxtr:SmallPyramidalPhenotype,
        ilxtr:StarPyramidalPhenotype,
        ilxtr:TuftedPyramidalPhenotype,
        ilxtr:UntuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Inverted pyramidal" .

ilxtr:IvyPhenotype a owl:Class ;
    rdfs:label "Ivy phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:MartinottiPhenotype,
        ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Ivy" .

ilxtr:LargeAxonPhenotype a owl:Class ;
    rdfs:label "Large axon phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasAxonMorphologicalPhenotype ;
    skos:hiddenLabel "Large axon" .

ilxtr:LargeBasketPhenotype a owl:Class ;
    rdfs:label "Large basket phenotype" ;
    rdfs:subClassOf ilxtr:BasketPhenotype ;
    owl:disjointWith ilxtr:NestBasketPhenotype,
        ilxtr:SmallBasketPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Large basket" .

ilxtr:LateBifurcatingPhenotype a owl:Class ;
    rdfs:label "Late bifurcating phenotype" ;
    rdfs:subClassOf ilxtr:BranchingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Late bifurcating" .

ilxtr:LateBifurcatingThickTuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Late bifurcating thick tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:ThickTuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Late bifurcating thick tufted pyramidal" .

ilxtr:LateBifurcatingTuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Late bifurcating tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:TuftedPyramidalPhenotype ;
    owl:disjointWith ilxtr:NarrowTuftedPyramidalPhenotype,
        ilxtr:SlenderTuftedPyramidalPhenotype,
        ilxtr:ThickTuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Late bifurcating tufted pyramidal" .

ilxtr:LocalAxon a owl:Class ;
    rdfs:label "Local axon" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    skos:hiddenLabel "Local axon" .

ilxtr:LocalAxonOnly a owl:Class ;
    rdfs:label "Local axon only" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    rdfs:comment "model this as NegPhenotype(ilxtr:RemoteAxon)? This really feels like we are overcomplicating things… all we should need to know is that in projects to its own brain region… or better to a specific cell population that has a known location" ;
    skos:hiddenLabel "Local axon only" .

ilxtr:MartinottiPhenotype a owl:Class ;
    rdfs:label "Martinotti phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:MediumSpinyPhenotype,
        ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Martinotti" .

ilxtr:MediumSpinyPhenotype a owl:Class ;
    rdfs:label "Medium spiny phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype,
        ilxtr:SpinyPhenotype ;
    owl:disjointWith ilxtr:NeurogliaformPhenotype,
        ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    rdfs:comment "we really should be able to deal with spines in a convenient way" ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Medium spiny" .

ilxtr:MorphologicalPhenotype a owl:Class ;
    rdfs:label "Morphological phenotype" ;
    rdfs:subClassOf ilxtr:CellPhenotype ;
    rdfs:comment "this is the 'general' morphological phenotype that might be made up of soma/axon/dendrite" ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Morphological" .

ilxtr:MotorPhenotype a owl:Class ;
    rdfs:label "Motor phenotype" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    rdfs:comment "motor neuron phenotype, motor projecting phenotype, muscle projecting phenotype, hasForwardConnectionPhenotype some myocyte, implies" ;
    skos:hiddenLabel "Motor" .

ilxtr:NarrowPhenotype a owl:Class ;
    rdfs:label "Narrow phenotype" ;
    rdfs:subClassOf ilxtr:TrunkPhenotype ;
    owl:disjointWith ilxtr:SlenderPhenotype,
        ilxtr:ThickPhenotype ;
    rdfs:comment "I get the feeling that this is actually a synonym for slender, ma2015sup uses 'thin' but that has nasty collsions with 'thick' for short naming (sigh)" ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Narrow" .

ilxtr:NarrowPyramidalPhenotype a owl:Class ;
    rdfs:label "Narrow pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    owl:disjointWith ilxtr:SmallPyramidalPhenotype,
        ilxtr:StarPyramidalPhenotype,
        ilxtr:TuftedPyramidalPhenotype,
        ilxtr:UntuftedPyramidalPhenotype ;
    rdfs:comment "this class is circumspect, and may actually be NarrowTuftedPyramidalPhenotype" ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Narrow pyramidal" .

ilxtr:NarrowTuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Narrow tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:TuftedPyramidalPhenotype ;
    owl:disjointWith ilxtr:SlenderTuftedPyramidalPhenotype,
        ilxtr:ThickTuftedPyramidalPhenotype ;
    rdfs:comment "issues with NarowPyramidalPhenotype" ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Narrow tufted pyramidal" .

ilxtr:NestBasketPhenotype a owl:Class ;
    rdfs:label "Nest basket phenotype" ;
    rdfs:subClassOf ilxtr:BasketPhenotype ;
    owl:disjointWith ilxtr:SmallBasketPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Nest basket" .

ilxtr:NeurogliaformDenseAxonPhenotype a owl:Class ;
    rdfs:label "Neurogliaform dense axon phenotype" ;
    rdfs:subClassOf ilxtr:NeurogliaformPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Neurogliaform dense axon" .

ilxtr:NeurogliaformPhenotype a owl:Class ;
    rdfs:label "Neurogliaform phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:PyramidalPhenotype,
        ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Neurogliaform" .

ilxtr:NeurogliaformSparseAxonPhenotype a owl:Class ;
    rdfs:label "Neurogliaform sparse axon phenotype" ;
    rdfs:subClassOf ilxtr:NeurogliaformPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Neurogliaform sparse axon" .

ilxtr:neuron-phenotype-para-post a owl:Class ;
    rdfs:label "Parasympathetic Post-Ganglionic phenotype" ;
    rdfs:subClassOf ilxtr:ParasympatheticPhenotype,
        ilxtr:PostGanglionicPhenotype ;
    skos:hiddenLabel "Parasympathetic Post-Ganglionic" .

ilxtr:neuron-phenotype-para-pre a owl:Class ;
    rdfs:label "Parasympathetic Pre-Ganglionic phenotype" ;
    rdfs:subClassOf ilxtr:ParasympatheticPhenotype,
        ilxtr:PreGanglionicPhenotype ;
    skos:hiddenLabel "Parasympathetic Pre-Ganglionic" .

ilxtr:neuron-phenotype-sym-post a owl:Class ;
    rdfs:label "Sympathetic Post-Ganglionic phenotype" ;
    rdfs:subClassOf ilxtr:PostGanglionicPhenotype,
        ilxtr:SympatheticPhenotype ;
    skos:hiddenLabel "Sympathetic Post-Ganglionic" .

ilxtr:neuron-phenotype-sym-pre a owl:Class ;
    rdfs:label "Sympathetic Pre-Ganglionic phenotype" ;
    rdfs:subClassOf ilxtr:PreGanglionicPhenotype,
        ilxtr:SympatheticPhenotype ;
    skos:hiddenLabel "Sympathetic Pre-Ganglionic" .

ilxtr:NonAccommodatingSpikingPhenotype a owl:Class ;
    rdfs:label "Non accommodating spiking phenotype" ;
    rdfs:subClassOf ilxtr:SpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Non accommodating spiking" .

ilxtr:ParasympatheticPhenotype a owl:Class ;
    rdfs:label "Parasympathetic phenotype" ;
    rdfs:subClassOf ilxtr:ANSPopulationPhenotype ;
    owl:disjointWith ilxtr:SympatheticPhenotype ;
    skos:hiddenLabel "Parasympathetic" .

ilxtr:PerforantPathwayAssociated a owl:Class ;
    rdfs:label "Perforant pathway associated" ;
    rdfs:comment "Needs work" ;
    skos:hiddenLabel "Perforant pathway associated" .

ilxtr:PetillaInitialBurstSpikingPhenotype a owl:Class ;
    rdfs:label "Petilla initial burst spiking phenotype" ;
    NIFRID:synonym "petilla b" ;
    rdfs:subClassOf ilxtr:PetillaInitialSpikingPhenotype ;
    owl:disjointWith ilxtr:PetillaInitialClassicalSpikingPhenotype,
        ilxtr:PetillaInitialDelayedSpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla initial burst spiking" .

ilxtr:PetillaInitialClassicalSpikingPhenotype a owl:Class ;
    rdfs:label "Petilla initial classical spiking phenotype" ;
    NIFRID:synonym "petilla c" ;
    rdfs:subClassOf ilxtr:PetillaInitialSpikingPhenotype ;
    owl:disjointWith ilxtr:PetillaInitialDelayedSpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla initial classical spiking" .

ilxtr:PetillaInitialDelayedSpikingPhenotype a owl:Class ;
    rdfs:label "Petilla initial delayed spiking phenotype" ;
    NIFRID:synonym "petilla d" ;
    rdfs:subClassOf ilxtr:PetillaInitialSpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla initial delayed spiking" .

ilxtr:PetillaInitialSpikingPhenotype a owl:Class ;
    rdfs:label "Petilla initial spiking phenotype" ;
    rdfs:subClassOf ilxtr:SpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla initial spiking" .

ilxtr:PetillaSustainedAccommodatingPhenotype a owl:Class ;
    rdfs:label "Petilla sustained accommodating phenotype" ;
    NIFRID:synonym "petilla ac" ;
    rdfs:subClassOf ilxtr:PetillaSustainedSpikingPhenotype ;
    owl:disjointWith ilxtr:PetillaSustainedIrregularPhenotype,
        ilxtr:PetillaSustainedNonAccommodatingPhenotype,
        ilxtr:PetillaSustainedStutteringPhenotype ;
    rdfs:comment "how do we deal with the fact that there are other accommodating phenotypes‚ multiple parent is annoying" ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla sustained accommodating" .

ilxtr:PetillaSustainedIrregularPhenotype a owl:Class ;
    rdfs:label "Petilla sustained irregular phenotype" ;
    NIFRID:synonym "petilla ir" ;
    rdfs:subClassOf ilxtr:PetillaSustainedSpikingPhenotype ;
    owl:disjointWith ilxtr:PetillaSustainedNonAccommodatingPhenotype,
        ilxtr:PetillaSustainedStutteringPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla sustained irregular" .

ilxtr:PetillaSustainedNonAccommodatingPhenotype a owl:Class ;
    rdfs:label "Petilla sustained non accommodating phenotype" ;
    NIFRID:synonym "petilla nac" ;
    rdfs:subClassOf ilxtr:PetillaSustainedSpikingPhenotype ;
    owl:disjointWith ilxtr:PetillaSustainedStutteringPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla sustained non accommodating" .

ilxtr:PetillaSustainedSpikingPhenotype a owl:Class ;
    rdfs:label "Petilla sustained spiking phenotype" ;
    rdfs:subClassOf ilxtr:SpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla sustained spiking" .

ilxtr:PetillaSustainedStutteringPhenotype a owl:Class ;
    rdfs:label "Petilla sustained stuttering phenotype" ;
    NIFRID:synonym "petilla stut" ;
    rdfs:subClassOf ilxtr:PetillaSustainedSpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Petilla sustained stuttering" .

ilxtr:PosteriorProjecting a owl:Class ;
    rdfs:label "Posterior projecting" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    rdfs:comment "projects in the posterior direction of the housing structure" ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Posterior projecting" .

ilxtr:PostGanglionicPhenotype a owl:Class ;
    rdfs:label "Post ganglionic phenotype" ;
    rdfs:subClassOf ilxtr:ANSPopulationPhenotype ;
    owl:disjointWith ilxtr:PreGanglionicPhenotype ;
    skos:hiddenLabel "Post ganglionic" .

ilxtr:PreGanglionicPhenotype a owl:Class ;
    rdfs:label "Pre ganglionic phenotype" ;
    rdfs:subClassOf ilxtr:ANSPopulationPhenotype ;
    skos:hiddenLabel "Pre ganglionic" .

ilxtr:ProjectionPhenotype a owl:Class ;
    rdfs:label "Projection phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    rdfs:comment "we don’t always have target location information, sometimes the best we get is ‘the axon leaves the section’, equivalent to RemoteAxon" ;
    skos:hiddenLabel "Projection" .

ilxtr:PyramidalPhenotype a owl:Class ;
    rdfs:label "Pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:RodMorphologicalPhenotype,
        ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Pyramidal" .

ilxtr:RegularSpikingNonPyramidalPhenotype a owl:Class ;
    rdfs:label "Regular spiking non pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:SpikingPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Regular spiking non pyramidal" .

ilxtr:RemoteAxon a owl:Class ;
    rdfs:label "Remote axon" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    rdfs:comment "hasProjectionPhenotype (some (class brainRegion (not (brainRegion containing this neruon))))" ;
    skos:hiddenLabel "Remote axon" .

ilxtr:RemoteAxonOnly a owl:Class ;
    rdfs:label "Remote axon only" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    rdfs:comment "model this as NegPhenotype(ilxtr:LocalAxon) except that this entails boutons/terminals" ;
    skos:hiddenLabel "Remote axon only" .

ilxtr:RodMorphologicalPhenotype a owl:Class ;
    rdfs:label "Rod phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    owl:disjointWith ilxtr:SpinyStellatePhenotype,
        ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Rod" .

ilxtr:SensoryPhenotype a owl:Class ;
    rdfs:label "Sensory phenotype" ;
    rdfs:subClassOf ilxtr:Phenotype ;
    rdfs:comment "the implementation of the sensor in a sensory neuron is essentially arbitrary with respect to subcompartment and projection pattern" ;
    skos:hiddenLabel "Sensory" .

ilxtr:SerotonergicPhenotype a owl:Class ;
    rdfs:label "Serotonergic phenotype" ;
    rdfs:subClassOf ilxtr:ExpressionPhenotype ;
    skos:hiddenLabel "Serotonergic" .

ilxtr:SlenderPhenotype a owl:Class ;
    rdfs:label "Slender phenotype" ;
    rdfs:subClassOf ilxtr:TrunkPhenotype ;
    owl:disjointWith ilxtr:ThickPhenotype ;
    rdfs:comment "is this a synonym for narrow?" ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Slender" .

ilxtr:SlenderTuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Slender tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:TuftedPyramidalPhenotype ;
    owl:disjointWith ilxtr:ThickTuftedPyramidalPhenotype ;
    rdfs:comment "note that there is also an 'untufted slender' classification so we probably do need to break these out" ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Slender tufted pyramidal" .

ilxtr:SmallAxonPhenotype a owl:Class ;
    rdfs:label "Small axon phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasAxonMorphologicalPhenotype ;
    skos:hiddenLabel "Small axon" .

ilxtr:SmallBasketPhenotype a owl:Class ;
    rdfs:label "Small basket phenotype" ;
    rdfs:subClassOf ilxtr:BasketPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Small basket" .

ilxtr:SmallPyramidalPhenotype a owl:Class ;
    rdfs:label "Small pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    owl:disjointWith ilxtr:StarPyramidalPhenotype,
        ilxtr:TuftedPyramidalPhenotype,
        ilxtr:UntuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Small pyramidal" .

ilxtr:SomaMorphologicalPhenotype a owl:Class ;
    rdfs:label "Soma morphological phenotype" ;
    rdfs:subClassOf ilxtr:SomaPhenotype .

ilxtr:SomaPhenotype a owl:Class ;
    rdfs:label "Soma phenotype" ;
    rdfs:subClassOf ilxtr:Phenotype .

ilxtr:SparseAxonPhenotype a owl:Class ;
    rdfs:label "Sparse axon phenotype" ;
    rdfs:subClassOf ilxtr:AxonPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasAxonMorphologicalPhenotype ;
    skos:hiddenLabel "Sparse axon" .

ilxtr:SpikingPhenotype a owl:Class ;
    rdfs:label "Spiking phenotype" ;
    rdfs:subClassOf ilxtr:ElectrophysiologicalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasElectrophysiologicalPhenotype ;
    skos:hiddenLabel "Spiking" .

ilxtr:SpinalCordAscendingProjectionPhenotype a owl:Class ;
    rdfs:label "Spinal cord ascending projection phenotype" ;
    rdfs:subClassOf ilxtr:AnteriorProjecting ;
    rdfs:comment "projects in the anterior direction of the spinal cord" ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Spinal cord ascending projection" .

ilxtr:SpinalCordDescendingProjectionPhenotype a owl:Class ;
    rdfs:label "Spinal cord descending projection phenotype" ;
    rdfs:subClassOf ilxtr:PosteriorProjecting ;
    rdfs:comment "projects in the posterior direction of the spinal cord" ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Spinal cord descending projection" .

ilxtr:SpinyPhenotype a owl:Class ;
    rdfs:label "Spiny phenotype" ;
    rdfs:subClassOf ilxtr:DendritePhenotype ;
    rdfs:comment "Aspiny can be modelled as (not ilxtr:SpinyPhenotype), this will be needed for Allen's scheme" ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Spiny" .

ilxtr:SpinyStellatePhenotype a owl:Class ;
    rdfs:label "Spiny stellate phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype,
        ilxtr:SpinyPhenotype ;
    owl:disjointWith ilxtr:TrilaminarPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Spiny stellate" .

ilxtr:StarPyramidalPhenotype a owl:Class ;
    rdfs:label "Star pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    owl:disjointWith ilxtr:TuftedPyramidalPhenotype,
        ilxtr:UntuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Star pyramidal" .

ilxtr:StriatoCortical a owl:Class ;
    rdfs:label "Striato cortical" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Striato cortical" .

ilxtr:SympatheticPhenotype a owl:Class ;
    rdfs:label "Sympathetic phenotype" ;
    rdfs:subClassOf ilxtr:ANSPopulationPhenotype ;
    skos:hiddenLabel "Sympathetic" .

ilxtr:ThalamoCortical a owl:Class ;
    rdfs:label "Thalamo cortical" ;
    rdfs:subClassOf ilxtr:ProjectionPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasProjectionPhenotype ;
    skos:hiddenLabel "Thalamo cortical" .

ilxtr:ThickPhenotype a owl:Class ;
    rdfs:label "Thick phenotype" ;
    rdfs:subClassOf ilxtr:TrunkPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Thick" .

ilxtr:ThickTuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Thick tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:TuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Thick tufted pyramidal" .

ilxtr:TrilaminarPhenotype a owl:Class ;
    rdfs:label "Trilaminar phenotype" ;
    rdfs:subClassOf ilxtr:MorphologicalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Trilaminar" .

ilxtr:TrunkPhenotype a owl:Class ;
    rdfs:label "Trunk phenotype" ;
    rdfs:subClassOf ilxtr:DendritePhenotype ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Trunk" .

ilxtr:TuftedPhenotype a owl:Class ;
    rdfs:label "Tufted phenotype" ;
    rdfs:subClassOf ilxtr:DendritePhenotype ;
    rdfs:comment "to get Untufted use the negative phenotype of this and add a naming rule" ;
    ilxtr:useObjectProperty ilxtr:hasDendriteMorphologicalPhenotype ;
    skos:hiddenLabel "Tufted" .

ilxtr:TuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Tufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    owl:disjointWith ilxtr:UntuftedPyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Tufted pyramidal" .

ilxtr:UntuftedPyramidalPhenotype a owl:Class ;
    rdfs:label "Untufted pyramidal phenotype" ;
    rdfs:subClassOf ilxtr:PyramidalPhenotype ;
    ilxtr:useObjectProperty ilxtr:hasMorphologicalPhenotype ;
    skos:hiddenLabel "Untufted pyramidal" .

### Serialized using the ttlser deterministic serializer v1.2.1