Diffusion.Tractography.Region-based 0.1.0.$Revision: 1892 $(alpha) http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/Seeding 3D Slicer Contribution and Software License Agreement Raul San Jose, Demian Wassermann, Lauren O'Donnell (SPL, LMI, BWH, SlicerDMRI) IO InputVolume Input DTI Volume input 0 InputROI Input Label Map -a --inputroi input OutputFibers Output Fiber Bundle output 1 Seeding Options ClTh Start Threshold -c --clthreshold 0.3 0 1 0.1 Tractography Seeding Parameters MinimumLength Minimum Length -l --minimumlength 20 0 200 1 MaximumLength Maximum Length -m --maximumlength 800 0 2000 1 ThresholdMode Stopping Criteria -f --thresholdmode FractionalAnisotropy LinearMeasure FractionalAnisotropy StoppingValue Stopping Value -v --stoppingvalue 0.25 0 1 0.01 StoppingCurvature Stopping Track Curvature -t --stoppingcurvature 0.7 0 10 0.1 IntegrationStepLength Integration Step Length(mm) -i --integrationsteplength 0.5 0.0 10 0.1 Label definition ROIlabel Seeding label -o --label 1 Advanced UseIndexSpace Use Index Space -x --useindexspace true SeedSpacing Seed Spacing -s --seedspacing 2 0.1 10 0.1 RandomGrid Random Grid -r --randomgrid false