strain: Strain
phenotypes:
  OFA_Groom_first5m:
      papername: GrTime5m
      group: Grooming Quantity
  OFA_Groom_first20m:
      papername: GrTime20m
      group: Grooming Quantity
  OFA_Groom_first55m:
      papername: GrTime55m
      group: Grooming Quantity
  OFA_Groom_first55m_linearslope:
      papername: GrTimeSlope55m
      group: Grooming Pattern
  OFA_GroomBouts_first5m:
      papername: GrBoutNum5m
      group: Grooming Quantity
  OFA_GroomBouts_first20m:
      papername: GrBoutNum20m
      group: Grooming Quantity
  OFA_GroomBouts_first55m:
      papername: GrBoutNum55m
      group: Grooming Quantity
  OFA_GroomBouts_first55m_linearslope:
      papername: GrBoutNumSlope55m
      group: Grooming Quantity
  OFA_GroomAvgBout_first5m:
      papername: GrBoutLength5m
      group: Grooming Pattern
  OFA_GroomAvgBout_first20m:
      papername: GrBoutLength20m
      group: Grooming Pattern
  OFA_GroomAvgBout_first55m:
      papername: GrBoutLength55m
      group: Grooming Pattern
  OFA_GroomAvgBout_first55m_linearslope:
      papername: GrBoutLengthSlope55m
      group: Grooming Pattern
  OFA_CornerTime_first5m:
      papername: OFCornerTime5m
      group: Anxiety
  OFA_CornerTime_first20m:
      papername: OFCornerTime20m
      group: Anxiety
  OFA_CornerTime_first55m:
      papername: OFCornerTime55m
      group: Anxiety
  OFA_DistanceTraveled_first5m:
      papername: OFDistTraveled5m
      group: Activity
  OFA_DistanceTraveled_first20m:
      papername: OFDistTraveled20m
      group: Activity
  OFA_DistanceTraveled_first55m:
      papername: OFDistTraveled55m
      group: Activity
  OFA_PeripheryTime_first5m:
      papername: OFPeripheryTime5m
      group: Anxiety
  OFA_PeripheryTime_first20m:
      papername: OFPeripheryTime20m
      group: Anxiety
  OFA_PeripheryTime_first55m:
      papername: OFPeripheryTime55m
      group: Anxiety
  OFA_GroomPeakMidBin:
      papername: GrPeakMidBin
      group: Grooming Pattern
  OFA_GroomPeakVal:
      papername: GrPeakVal
      group: Grooming Quantity
  OFA_GroomPeakSlope:
      papername: GrPeakSlope
      group: Grooming Pattern
groups:
  - Activity
  - Anxiety
  - Grooming Pattern
  - Grooming Quantity
F1:
  - B6129SF1/J:
      - C57BL/6J
      - 129S1/SvImJ
  - B6129PF1/J:
      - C57BL/6J
      - 129P3/J
  - B6AF1/J:
      - C57BL/6J
      - A/J
  - B6C3F1/J:
      - C57BL/6J
      - C3H/HeJ
  - B6CBAF1/J:
      - C57BL/6J
      - CBA/J
  - B6D2F1/J:
      - C57BL/6J
      - DBA/2J
  - B6SJLF1/J:
      - C57BL/6J
      - SJL/J
  - CAF1/J:
      - BALB/cJ
      - A/J
  - CB6F1/J:
      - BALB/cJ
      - C57BL/6J
  - CByB6F1/J:
      - BALB/cByJ
      - C57BL/6J
  - NZBWF1/J:
      - NZB/BlNJ
      - NZW/LacJ
covar:
  - Sex
sex: Sex
translate:
  - BTBRT...tf.J: BTBR T<+> Itpr3<tf>/J
  - 129S1.SvImJ: 129S1/SvImJ
  - C3H/HeOuJ: C3H/HeJ
  - NON/LtJ: NON/ShiLtJ
  - NOD/LtJ: NOD/ShiLtJ
  - CAST/EiJ: none
  - PWD/PhJ: none
  - CZECHII/EiJ: none
  - PWK/PhJ: none
  - MSM/MsJ: none
  - MOLF/EiJ: none
coat:
  - 129P3/J: albino
  - 129S1/SvImJ: white-bellied agouti
  - 129X1/SvJ: albino
  - A/HeJ: albino
  - A/J: albino
  - AKR/J: albino
  - B6.Cg-Ay/J: yellow or black
  - B6.Cg-Tubtub/J: black
  - B6.V-Lepob/J: black
  - BALB/cByJ: albino
  - BALB/cJ: albino
  - BKS.Cg-m +/+ Leprdb/J: black
  - BKSChpLt.HRS-Cpefat/J: black
  - BPH/2J: albino
  - BPL/1J: misty
  - BPN/3J: black
  - BTBR T+ Itpr3tf/J: black
  - BUB/BnJ: albino
  - C3HeB/FeJ: agouti
  - C3H/HeJ: agouti
  - C3H/HeSnJ: agouti
  - C57BL/10J: black
  - C57BL/6J: black
  - C57BLKS/J: black
  - C57BR/cdJ: brown
  - C57L/J: leaden
  - C58/J: black
  - CAST/EiJ: agouti
  - CBA/CaJ: agouti
  - CBA/J: agouti
  - CE/J: greyish white
  - CZECHII/EiJ: white-bellied agouti
  - DBA/1J: dilute brown
  - DBA/2J: dilute brown
  - FVB/NJ: albino
  - I/LnJ: dilute brown
  - JF1/MsJ: white w/ black spots
  - KK/HlJ: albino
  - LP/J: white-bellied agouti
  - MA/MyJ: albino
  - MOLF/EiJ: white-bellied agouti
  - MSM/MsJ: white-bellied agouti
  - NOD/ShiLtJ: albino
  - NON/ShiLtJ: albino
  - NZB/BlNJ: black
  - NZW/LacJ: albino
  - PERA/EiJ: agouti
  - P/J: fawn; pink eyes
  - PL/J: albino
  - PWD/PhJ: agouti
  - PWK/PhJ: agouti
  - RBF/DnJ: albino
  - RF/J: albino
  - RIIIS/J: albino
  - SEA/GnJ: light brown agouti
  - SJL/J: albino
  - SM/J: white-bellied agouti
  - SPRET/EiJ: white-bellied agouti
  - SWR/J: albino
  - WSB/EiJ: white-bellied agouti
  - YBR/EiJ: brown
  - B6FVBF1/J: agouti
  - B6AF1/J: black
  - CAF1/J: albino
  - B6D2F1/J: black
  - CB6F1/J: agouti
  - NZBWF1/J: agouti
  - CByB6F1/J: agouti
  - B6C3F1/J: agouti
  - B6CBAF1/J: agouti
  - B6SJLF1/J: agouti
  - B6129PF1/J: white-bellied agouti
  - B6129SF1/J: white-bellied agouti
  - NOR/LtJ: albino
  - TALLYHO/JngJ: albino
  - NU/J: albino, without hair
  - MRL/MpJ: albino
  - LG/J: albino
  - 129S1/SvlmJ: white-bellied agouti
  - C3H/HeOuJ: agouti
  - C57BL/10SnJ: black
  - C57BL/6NJ: black
  - KK/HiJ: albino
  - NZO/HILtJ: agouti
confSNPs:
  - rs32105080