@prefix : . @prefix om2: . @prefix owl: . @prefix rdf: . @prefix xml: . @prefix xsd: . @prefix rdfs: . @prefix skos: . @base . rdf:type owl:Ontology . ################################################################# # Annotation properties ################################################################# ### http://www.ontology-of-units-of-measure.org/resource/om-2/alternativeLabel om2:alternativeLabel rdf:type owl:AnnotationProperty . ### http://www.w3.org/2004/02/skos/core#closeMatch rdf:type owl:AnnotationProperty . ################################################################# # Object Properties ################################################################# ### http://www.ontology-of-units-of-measure.org/resource/om-2/commonlyHasUnit om2:commonlyHasUnit rdf:type owl:ObjectProperty ; rdfs:range om2:Unit . ### http://www.ontology-of-units-of-measure.org/resource/om-2/hasAggregateFunction om2:hasAggregateFunction rdf:type owl:ObjectProperty ; rdfs:domain om2:Quantity ; rdfs:range om2:Function ; rdfs:label "has aggregate function"@en , "集計関数を持つ"@ja . ### http://www.ontology-of-units-of-measure.org/resource/om-2/hasPhenomenon om2:hasPhenomenon rdf:type owl:ObjectProperty ; rdfs:domain om2:Quantity ; rdfs:range :Host , :Sample . ### http://www.ontology-of-units-of-measure.org/resource/om-2/hasUnit om2:hasUnit rdf:type owl:ObjectProperty ; rdfs:domain om2:Measure ; rdfs:range om2:Unit . ### http://www.ontology-of-units-of-measure.org/resource/om-2/hasValue om2:hasValue rdf:type owl:ObjectProperty ; rdfs:domain om2:Quantity ; rdfs:range om2:Measure . ### http://www.purl.org/infection_trans#against :against rdf:type owl:ObjectProperty ; rdfs:domain :PathogenResistance ; rdfs:range :Antibiotic . ### http://www.purl.org/infection_trans#hasDose :hasDose rdf:type owl:ObjectProperty ; rdfs:domain :Inoculation , :Treatment ; rdfs:range om2:Quantity , om2:VolumetricViableCount . ### http://www.purl.org/infection_trans#hasEvent :hasEvent rdf:type owl:ObjectProperty ; rdfs:domain :Experiment ; rdfs:range :Movement , :Observation . ### http://www.purl.org/infection_trans#hasGene :hasGene rdf:type owl:ObjectProperty ; rdfs:domain :Pathogen ; rdfs:range :Gene . ### http://www.purl.org/infection_trans#hasHost :hasHost rdf:type owl:ObjectProperty ; rdfs:domain :Measurement ; rdfs:range :Environment , :Host . ### http://www.purl.org/infection_trans#hasInoculation :hasInoculation rdf:type owl:ObjectProperty ; rdfs:domain :Experiment ; rdfs:range :Inoculation . ### http://www.purl.org/infection_trans#hasMeasurement :hasMeasurement rdf:type owl:ObjectProperty ; rdfs:domain :Experiment ; rdfs:range :Measurement . ### http://www.purl.org/infection_trans#hasPathogen :hasPathogen rdf:type owl:ObjectProperty ; rdfs:domain :Sample ; rdfs:range :Pathogen . ### http://www.purl.org/infection_trans#hasQuantity :hasQuantity rdf:type owl:ObjectProperty ; rdfs:domain :Measurement ; rdfs:range om2:BodyMass , om2:SpecificViableCount , om2:VolumetricViableCount . ### http://www.purl.org/infection_trans#hasResistance :hasResistance rdf:type owl:ObjectProperty ; rdfs:domain :Pathogen ; rdfs:range :PathogenResistance . ### http://www.purl.org/infection_trans#hasSample :hasSample rdf:type owl:ObjectProperty ; rdfs:domain :Measurement ; rdfs:range :Sample . ### http://www.purl.org/infection_trans#hasTreatment :hasTreatment rdf:type owl:ObjectProperty ; rdfs:domain :Experiment ; rdfs:range :Treatment . ### http://www.purl.org/infection_trans#hasType :hasType rdf:type owl:ObjectProperty ; rdfs:domain :Observation , :Sample ; rdfs:range :ObservationType , :SampleType . ### http://www.purl.org/infection_trans#includes :includes rdf:type owl:ObjectProperty ; rdfs:domain :Treatment ; rdfs:range :Antibiotic , :Pathogen . ### http://www.purl.org/infection_trans#involves :involves rdf:type owl:ObjectProperty ; rdfs:domain :Inoculation , :Movement , :Observation , :Treatment ; rdfs:range :Host . ### http://www.purl.org/infection_trans#locatedIn :locatedIn rdf:type owl:ObjectProperty ; rdfs:domain :Host , :Movement ; rdfs:range :Environment . ### http://www.purl.org/infection_trans#takenFrom :takenFrom rdf:type owl:ObjectProperty ; rdfs:domain :Measurement ; rdfs:range :Environment . ### http://www.purl.org/infection_trans#testedBy :testedBy rdf:type owl:ObjectProperty ; rdfs:domain :Sample ; rdfs:range :DiagnosticTest . ################################################################# # Data properties ################################################################# ### http://www.ontology-of-units-of-measure.org/resource/om-2/hasNumericalValue om2:hasNumericalValue rdf:type owl:DatatypeProperty ; rdfs:domain om2:Measure ; rdfs:range rdfs:Literal . ### http://www.purl.org/infection_trans#age :age rdf:type owl:DatatypeProperty ; rdfs:domain :Host . ### http://www.purl.org/infection_trans#coordinates :coordinates rdf:type owl:DatatypeProperty ; rdfs:domain :Environment . ### http://www.purl.org/infection_trans#date :date rdf:type owl:DatatypeProperty ; rdfs:range xsd:dateTime . ### http://www.purl.org/infection_trans#detectionLimit :detectionLimit rdf:type owl:DatatypeProperty ; rdfs:domain :Sample . ### http://www.purl.org/infection_trans#experimentDay :experimentDay rdf:type owl:DatatypeProperty ; rdfs:domain :Experiment . ### http://www.purl.org/infection_trans#experimentHour :experimentHour rdf:type owl:DatatypeProperty ; rdfs:domain :Inoculation , :Measurement , :Treatment . ### http://www.purl.org/infection_trans#experimentID :experimentID rdf:type owl:DatatypeProperty ; rdfs:domain :Experiment . ### http://www.purl.org/infection_trans#experimentType :experimentType rdf:type owl:DatatypeProperty ; rdfs:domain :Experiment . ### http://www.purl.org/infection_trans#family :family rdf:type owl:DatatypeProperty ; rdfs:domain :Pathogen . ### http://www.purl.org/infection_trans#feedConsumption :feedConsumption rdf:type owl:DatatypeProperty . ### http://www.purl.org/infection_trans#groupNumber :groupNumber rdf:type owl:DatatypeProperty ; rdfs:domain :Environment . ### http://www.purl.org/infection_trans#hourAfterInoculation :hourAfterInoculation rdf:type owl:DatatypeProperty ; rdfs:domain :Measurement . ### http://www.purl.org/infection_trans#id :id rdf:type owl:DatatypeProperty ; rdfs:domain :Host . ### http://www.purl.org/infection_trans#inoculationStatus :inoculationStatus rdf:type owl:DatatypeProperty ; rdfs:domain :Host . ### http://www.purl.org/infection_trans#level1 :level1 rdf:type owl:DatatypeProperty ; rdfs:domain :Environment . ### http://www.purl.org/infection_trans#level2 :level2 rdf:type owl:DatatypeProperty ; rdfs:domain :Environment . ### http://www.purl.org/infection_trans#level3 :level3 rdf:type owl:DatatypeProperty ; rdfs:domain :Environment . ### http://www.purl.org/infection_trans#material :material rdf:type owl:DatatypeProperty ; rdfs:domain :Sample . ### http://www.purl.org/infection_trans#name :name rdf:type owl:DatatypeProperty ; rdfs:domain :Antibiotic , :Gene , :ObservationType , :Pathogen . ### http://www.purl.org/infection_trans#repetition :repetition rdf:type owl:DatatypeProperty ; rdfs:domain :Experiment . ### http://www.purl.org/infection_trans#result :result rdf:type owl:DatatypeProperty ; rdfs:domain :PathogenResistance , :Sample . ### http://www.purl.org/infection_trans#resultDate :resultDate rdf:type owl:DatatypeProperty ; rdfs:domain :Sample ; rdfs:range xsd:dateTime . ### http://www.purl.org/infection_trans#sample :sample rdf:type owl:DatatypeProperty ; rdfs:domain :Experiment . ### http://www.purl.org/infection_trans#sex :sex rdf:type owl:DatatypeProperty ; rdfs:domain :Host . ### http://www.purl.org/infection_trans#strain :strain rdf:type owl:DatatypeProperty ; rdfs:domain :Pathogen . ### http://www.purl.org/infection_trans#studyDesign :studyDesign rdf:type owl:DatatypeProperty ; rdfs:domain :Experiment . ### http://www.purl.org/infection_trans#testName :testName rdf:type owl:DatatypeProperty ; rdfs:domain :DiagnosticTest . ### http://www.purl.org/infection_trans#treatment :treatment rdf:type owl:DatatypeProperty ; rdfs:domain :Host . ### http://www.purl.org/infection_trans#trialArm :trialArm rdf:type owl:DatatypeProperty ; rdfs:domain :Host . ### http://www.purl.org/infection_trans#type :type rdf:type owl:DatatypeProperty ; rdfs:domain :Host . ################################################################# # Classes ################################################################# ### http://www.ontology-of-units-of-measure.org/resource/om-2/BodyMass om2:BodyMass rdf:type owl:Class ; rdfs:subClassOf om2:Quantity . ### http://www.ontology-of-units-of-measure.org/resource/om-2/Function om2:Function rdf:type owl:Class ; rdfs:label "function"@en , "関数"@ja . ### http://www.ontology-of-units-of-measure.org/resource/om-2/Measure om2:Measure rdf:type owl:Class ; rdfs:isDefinedBy "http://www.ontology-of-units-of-measure.org/resource/om-2/Measure" . ### http://www.ontology-of-units-of-measure.org/resource/om-2/Quantity om2:Quantity rdf:type owl:Class ; rdfs:isDefinedBy "http://www.ontology-of-units-of-measure.org/resource/om-2/Quantity" . ### http://www.ontology-of-units-of-measure.org/resource/om-2/SpecificViableCount om2:SpecificViableCount rdf:type owl:Class ; rdfs:subClassOf om2:Quantity , [ rdf:type owl:Restriction ; owl:onProperty om2:hasValue ; owl:allValuesFrom [ rdf:type owl:Restriction ; owl:onProperty om2:hasUnit ; owl:allValuesFrom om2:SpecificViableCountUnit ] ] . ### http://www.ontology-of-units-of-measure.org/resource/om-2/SpecificViableCountUnit om2:SpecificViableCountUnit rdf:type owl:Class ; owl:equivalentClass [ rdf:type owl:Class ; owl:oneOf ( om2:colonyFormingUnitPerGram ) ] ; rdfs:subClassOf om2:Unit ; rdfs:label "specific viable count unit"@en . ### http://www.ontology-of-units-of-measure.org/resource/om-2/Unit om2:Unit rdf:type owl:Class ; rdfs:comment "A unit of measure is a definite magnitude of a quantity, defined and adopted by convention or by law. It is used as a standard for measurement of the same quantity, where any other value of the quantity can be expressed as a simple multiple of the unit. For example, length is a quantity; the metre is a unit of length that represents a definite predetermined length. When we say 10 metre (or 10 m), we actually mean 10 times the definite predetermined length called \"metre\"." . ### http://www.ontology-of-units-of-measure.org/resource/om-2/VolumetricViableCount om2:VolumetricViableCount rdf:type owl:Class ; rdfs:subClassOf om2:Quantity , [ rdf:type owl:Restriction ; owl:onProperty om2:hasValue ; owl:allValuesFrom [ rdf:type owl:Restriction ; owl:onProperty om2:hasUnit ; owl:allValuesFrom om2:VolumetricViableCountUnit ] ] ; rdfs:label "viable count (volumetric)"@en . ### http://www.ontology-of-units-of-measure.org/resource/om-2/VolumetricViableCountUnit om2:VolumetricViableCountUnit rdf:type owl:Class ; owl:equivalentClass [ rdf:type owl:Class ; owl:oneOf ( om2:_1000ColonyFormingUnitPerMillilitre om2:colonyFormingUnitPer25Millilitre om2:colonyFormingUnitPerMillilitre ) ] ; rdfs:subClassOf om2:Unit ; rdfs:label "volumetric viable count unit"@en . ### http://www.purl.org/infection_trans#Antibiotic :Antibiotic rdf:type owl:Class ; rdfs:comment "medicine used for treatmnet of a host" . ### http://www.purl.org/infection_trans#DiagnosticTest :DiagnosticTest rdf:type owl:Class ; rdfs:comment "any medical test performed to confirm, or determine the presence of disease in an individual suspected of having the disease" . ### http://www.purl.org/infection_trans#Environment :Environment rdf:type owl:Class ; rdfs:comment "location of the conducted experiment." . ### http://www.purl.org/infection_trans#Experiment :Experiment rdf:type owl:Class ; rdfs:comment "A transmission experiment specifies setup and day of the experiment." . ### http://www.purl.org/infection_trans#Gene :Gene rdf:type owl:Class ; rdfs:comment "the minimal contiguous stretch of DNA in a bacterium that contains the expressed and regulatory sequences sufficient to complement the function of a null mutation in trans." . ### http://www.purl.org/infection_trans#Host :Host rdf:type owl:Class ; rdfs:comment "a larger organism that harbours a smaller orgamisms." ; rdfs:isDefinedBy "https://en.wikipedia.org/wiki/Host_(biology)" . ### http://www.purl.org/infection_trans#Inoculation :Inoculation rdf:type owl:Class ; rdfs:comment "a set of methods of artificially inducing immunity against various infectious diseases." . ### http://www.purl.org/infection_trans#Measurement :Measurement rdf:type owl:Class ; rdfs:isDefinedBy "process of associating numbers with physical quantities and phenomena. For example, indicating negative or positive sample, measuring bacteruim count or mass of host." . ### http://www.purl.org/infection_trans#Movement :Movement rdf:type owl:Class ; rdfs:comment "class that is used to specify if host has changed the environment during the experiment" ; rdfs:label "Movement" . ### http://www.purl.org/infection_trans#Observation :Observation rdf:type owl:Class ; rdfs:comment "is a process of closely monitoring the host." . ### http://www.purl.org/infection_trans#ObservationType :ObservationType rdf:type owl:Class ; rdfs:comment "type of observation . For example, 'Death' or 'HighFever'" . ### http://www.purl.org/infection_trans#Pathogen :Pathogen rdf:type owl:Class ; rdfs:comment "an organism causing disease to its host." ; "http://purl.obolibrary.org/obo/IDO_0000528" . ### http://www.purl.org/infection_trans#PathogenResistance :PathogenResistance rdf:type owl:Class ; rdfs:comment "an ability to limit pathogen burden." . ### http://www.purl.org/infection_trans#Sample :Sample rdf:type owl:Class ; rdfs:comment "A biological specimen including, for example, blood, tissue, urine, etc. taken from a host." . ### http://www.purl.org/infection_trans#SampleType :SampleType rdf:type owl:Class ; rdfs:comment "type of the sample. For example, swab sample or bootsock sample." . ### http://www.purl.org/infection_trans#Treatment :Treatment rdf:type owl:Class ; rdfs:comment "a process of giving medication or antibiotic to a host." . ################################################################# # Individuals ################################################################# ### http://www.ontology-of-units-of-measure.org/resource/om-2/BodyMass om2:BodyMass rdf:type owl:NamedIndividual ; om2:commonlyHasUnit om2:gram , om2:kilogram , om2:tonne . ### http://www.ontology-of-units-of-measure.org/resource/om-2/_1000ColonyFormingUnitPerMillilitre om2:_1000ColonyFormingUnitPerMillilitre rdf:type owl:NamedIndividual , om2:VolumetricViableCountUnit . ### http://www.ontology-of-units-of-measure.org/resource/om-2/colonyFormingUnitPer25Millilitre om2:colonyFormingUnitPer25Millilitre rdf:type owl:NamedIndividual , om2:VolumetricViableCountUnit . ### http://www.ontology-of-units-of-measure.org/resource/om-2/colonyFormingUnitPerGram om2:colonyFormingUnitPerGram rdf:type owl:NamedIndividual , om2:SpecificViableCountUnit . ### http://www.ontology-of-units-of-measure.org/resource/om-2/colonyFormingUnitPerMillilitre om2:colonyFormingUnitPerMillilitre rdf:type owl:NamedIndividual , om2:VolumetricViableCountUnit . ### http://www.ontology-of-units-of-measure.org/resource/om-2/gram om2:gram rdf:type owl:NamedIndividual , om2:Unit ; rdfs:comment "The gram is a unit of mass defined as 1.0e-3 kilogram."@en ; rdfs:label "gram"@en , "gram"@nl , "克"@zh . ### http://www.ontology-of-units-of-measure.org/resource/om-2/kilogram om2:kilogram rdf:type owl:NamedIndividual , om2:Unit ; rdfs:comment "The kilogram is a unit of mass defined as the mass of the international prototype of the kilogram."@en , "The tonne is a unit of mass defined as 1000 kilogram."@en ; rdfs:label "kilogram"@en , "kilogram"@nl , "ton"@nl , "tonne"@en , "公吨"@zh , "公斤"@zh . ### http://www.ontology-of-units-of-measure.org/resource/om-2/log10 om2:log10 rdf:type owl:NamedIndividual , om2:Function ; om2:alternativeLabel "50th percentile"@en ; rdfs:label "log10"@en . ### http://www.ontology-of-units-of-measure.org/resource/om-2/median om2:median rdf:type owl:NamedIndividual , om2:Function ; om2:alternativeLabel "50th percentile"@en ; rdfs:label "median"@en . ### http://www.ontology-of-units-of-measure.org/resource/om-2/tonne om2:tonne rdf:type owl:NamedIndividual . ### http://www.purl.org/infection_trans#AirFilter :AirFilter rdf:type owl:NamedIndividual , :SampleType . ### http://www.purl.org/infection_trans#Death :Death rdf:type owl:NamedIndividual , :ObservationType . ### http://www.purl.org/infection_trans#EnvironmentalSample :EnvironmentalSample rdf:type owl:NamedIndividual , :SampleType . ### http://www.purl.org/infection_trans#Swab :Swab rdf:type owl:NamedIndividual , :SampleType . ### Generated by the OWL API (version 4.5.9.2019-02-01T07:24:44Z) https://github.com/owlcs/owlapi