CHROM,POS,ID,REF,ALT,QUAL,quality_category,is_QTL,QTL_role,Freq_Eastern,Freq_Midwest,Freq_Western
Chr01,323873,SNP_0001,T,C,368,high_missing,False,none,0.507,0.505,0.501
Chr01,579332,SNP_0002,C,A,811,good,False,none,0.209,0.289,0.153
Chr01,832412,SNP_0003,C,G,199,good,False,none,0.861,0.95,0.751
Chr01,1518336,SNP_0004,G,T,760,good,False,none,0.261,0.182,0.241
Chr01,1682810,SNP_0005,A,G,390,good,False,none,0.522,0.564,0.532
Chr01,2362924,SNP_0006,C,G,688,good,False,none,0.174,0.163,0.173
Chr01,2391265,SNP_0007,T,A,568,good,False,none,0.793,0.792,0.893
Chr01,2661953,SNP_0008,C,A,850,good,False,none,0.456,0.446,0.45
Chr01,2850901,SNP_0009,G,A,133,good,False,none,0.646,0.568,0.623
Chr01,3012329,SNP_0010,A,G,572,high_missing,False,none,0.672,0.602,0.669
Chr01,3617409,SNP_0011,A,T,355,good,False,none,0.201,0.392,0.411
Chr01,3638443,SNP_0012,A,C,972,good,False,none,0.118,0.178,0.085
Chr01,4145819,SNP_0013,A,C,536,good,False,none,0.209,0.233,0.185
Chr01,4200769,SNP_0014,C,T,659,good,False,none,0.416,0.534,0.751
Chr01,5063409,SNP_0015,T,A,535,high_missing,False,none,0.085,0.123,0.122
Chr01,5120620,SNP_0016,C,A,334,good,False,none,0.171,0.213,0.232
Chr01,5165430,SNP_0017,T,C,177,good,False,none,0.158,0.126,0.118
Chr01,5361714,SNP_0018,A,T,571,good,False,none,0.249,0.168,0.35
Chr01,5847789,SNP_0019,T,G,952,good,False,none,0.766,0.95,0.614
Chr01,6414879,SNP_0020,T,G,174,good,False,none,0.547,0.661,0.626
Chr01,6479803,SNP_0021,G,T,930,good,False,none,0.862,0.734,0.786
Chr01,6796646,SNP_0022,C,A,342,good,False,none,0.917,0.915,0.808
Chr01,7123488,SNP_0023,G,T,585,good,False,none,0.127,0.212,0.13
Chr01,7544996,SNP_0024,C,A,679,good,False,none,0.436,0.369,0.375
Chr01,8339583,SNP_0025,T,A,645,good,False,none,0.754,0.766,0.785
Chr01,8547395,SNP_0026,C,G,944,good,False,none,0.05,0.225,0.148
Chr01,9135282,SNP_0027,T,G,223,high_missing,False,none,0.467,0.476,0.475
Chr01,9436218,SNP_0028,C,T,686,good,False,none,0.317,0.05,0.093
Chr01,9601843,SNP_0029,T,C,791,high_missing,False,none,0.451,0.427,0.467
Chr01,10149490,SNP_0030,C,G,716,good,False,none,0.297,0.298,0.287
Chr01,10552362,SNP_0031,T,C,368,good,False,none,0.826,0.678,0.745
Chr01,10814581,SNP_0032,A,T,475,good,False,none,0.244,0.28,0.12
Chr01,11663473,SNP_0033,G,T,810,high_missing,False,none,0.183,0.266,0.181
Chr01,12053754,SNP_0034,G,T,131,good,False,none,0.752,0.897,0.806
Chr01,12329595,SNP_0035,C,G,932,good,False,none,0.909,0.869,0.918
Chr01,12812456,SNP_0036,A,T,193,low_maf,False,none,0.018,0.018,0.013
Chr01,13092976,SNP_0037,G,A,601,good,False,none,0.384,0.369,0.182
Chr01,13269599,SNP_0038,G,C,547,good,False,none,0.544,0.581,0.605
Chr01,13872847,SNP_0039,A,T,117,good,False,none,0.756,0.804,0.628
Chr01,14042954,SNP_0040,C,A,408,low_maf,False,none,0.005,0.005,0.004
Chr01,14454833,SNP_0041,C,G,870,good,False,none,0.323,0.369,0.318
Chr01,14589508,SNP_0042,A,T,333,good,False,none,0.231,0.1,0.192
Chr01,15132426,SNP_0043,T,C,684,good,False,none,0.767,0.796,0.745
Chr01,15218975,SNP_0044,T,G,824,good,False,none,0.168,0.237,0.191
Chr01,15296020,SNP_0045,T,C,809,good,False,none,0.302,0.298,0.289
Chr01,15473250,SNP_0046,G,T,258,low_maf,False,none,0.017,0.024,0.023
Chr01,15720141,SNP_0047,G,T,363,low_maf,False,none,0.018,0.019,0.013
Chr01,16285298,SNP_0048,C,A,410,low_maf,False,none,0.013,0.012,0.012
Chr01,16409456,SNP_0049,C,T,832,good,False,none,0.254,0.3,0.361
Chr01,16738351,SNP_0050,T,A,262,good,False,none,0.435,0.472,0.49
Chr01,16738874,SNP_0051,T,G,459,high_missing,False,none,0.05,0.176,0.176
Chr01,18250140,SNP_0052,G,A,585,good,False,none,0.096,0.139,0.091
Chr01,18578294,SNP_0053,G,T,241,good,False,none,0.606,0.713,0.529
Chr01,18647806,SNP_0054,C,T,951,good,False,none,0.284,0.31,0.296
Chr01,19410117,SNP_0055,G,A,318,good,False,none,0.626,0.564,0.702
Chr01,20135828,SNP_0056,C,T,359,good,False,none,0.277,0.05,0.25
Chr01,21212341,SNP_0057,T,G,299,good,False,none,0.61,0.8,0.777
Chr01,21353374,SNP_0058,T,C,202,good,False,none,0.909,0.812,0.92
Chr01,21462366,SNP_0059,A,G,750,good,False,none,0.405,0.277,0.505
Chr01,21498416,SNP_0060,G,C,989,good,False,none,0.419,0.482,0.417
Chr02,5350,SNP_0061,A,T,947,good,False,none,0.132,0.204,0.123
Chr02,50032,SNP_0062,C,T,706,good,False,none,0.374,0.319,0.392
Chr02,92386,SNP_0063,T,A,233,good,False,none,0.18,0.172,0.167
Chr02,880618,SNP_0064,G,C,318,good,False,none,0.243,0.066,0.205
Chr02,966301,SNP_0065,T,G,706,good,False,none,0.286,0.309,0.363
Chr02,1088071,SNP_0066,A,C,733,good,False,none,0.073,0.109,0.12
Chr02,1585106,SNP_0067,T,G,979,good,False,none,0.861,0.829,0.95
Chr02,1640926,SNP_0068,T,C,370,high_missing,False,none,0.174,0.139,0.152
Chr02,1784655,SNP_0069,G,T,988,good,False,none,0.107,0.187,0.099
Chr02,1848518,SNP_0070,G,A,257,high_missing,False,none,0.401,0.406,0.489
Chr02,2005458,SNP_0071,C,A,148,good,False,none,0.67,0.603,0.572
Chr02,2171983,SNP_0072,A,T,771,good,False,none,0.894,0.895,0.904
Chr02,2492692,SNP_0073,A,T,104,good,False,none,0.464,0.132,0.506
Chr02,3367294,SNP_0074,T,G,136,good,False,none,0.371,0.363,0.417
Chr02,3901175,SNP_0075,C,T,688,good,False,none,0.314,0.469,0.242
Chr02,4150139,SNP_0076,C,A,363,high_missing,False,none,0.808,0.787,0.796
Chr02,4195899,SNP_0077,A,G,311,good,False,none,0.486,0.363,0.53
Chr02,4265300,SNP_0078,T,A,522,good,False,none,0.325,0.154,0.257
Chr02,4405321,SNP_0079,G,C,629,good,False,none,0.924,0.818,0.866
Chr02,4576209,SNP_0080,G,T,976,good,False,none,0.461,0.445,0.514
Chr02,4805639,SNP_0081,G,C,855,high_missing,False,none,0.603,0.603,0.604
Chr02,4913372,SNP_0082,C,G,702,good,False,none,0.611,0.512,0.692
Chr02,4932025,SNP_0083,C,G,302,good,False,none,0.755,0.802,0.682
Chr02,5312900,SNP_0084,T,A,468,good,False,none,0.174,0.12,0.05
Chr02,5552935,SNP_0085,A,C,462,good,False,none,0.675,0.627,0.655
Chr02,5991298,SNP_0086,T,C,427,good,False,none,0.492,0.687,0.688
Chr02,6696912,SNP_0087,C,T,545,good,False,none,0.305,0.314,0.351
Chr02,6706890,SNP_0088,C,A,956,good,False,none,0.694,0.825,0.819
Chr02,6720763,SNP_0089,A,T,172,good,False,none,0.792,0.807,0.833
Chr02,7021698,SNP_0090,C,T,585,good,False,none,0.182,0.14,0.05
Chr02,7377480,SNP_0091,C,A,291,good,False,none,0.156,0.206,0.436
Chr02,7514667,SNP_0092,C,A,113,good,False,none,0.799,0.663,0.592
Chr02,7519156,SNP_0093,A,G,229,good,False,none,0.13,0.102,0.095
Chr02,7565826,SNP_0094,A,T,610,good,False,none,0.668,0.618,0.554
Chr02,7659111,SNP_0095,A,T,977,low_maf,False,none,0.004,0.002,0.009
Chr02,8940758,SNP_0096,C,T,466,low_maf,False,none,0.005,0.005,0.01
Chr02,8945857,SNP_0097,T,A,901,low_maf,False,none,0.005,0.005,0.005
Chr02,9148924,SNP_0098,T,A,248,high_missing,False,none,0.164,0.09,0.081
Chr02,9513579,SNP_0099,A,G,848,good,False,none,0.475,0.448,0.461
Chr02,9544218,SNP_0100,G,C,943,good,False,none,0.687,0.685,0.657
Chr02,9928144,SNP_0101,G,A,914,good,False,none,0.799,0.8,0.834
Chr02,10256123,SNP_0102,A,T,450,good,False,none,0.248,0.221,0.227
Chr02,10737769,SNP_0103,T,C,881,good,False,none,0.572,0.536,0.572
Chr02,11107577,SNP_0104,G,C,329,low_maf,False,none,0.001,0.001,0.007
Chr02,11147161,SNP_0105,C,G,776,good,False,none,0.547,0.376,0.529
Chr02,13179001,SNP_0106,C,A,783,good,False,none,0.182,0.277,0.111
Chr02,14297876,SNP_0107,G,T,762,good,False,none,0.705,0.724,0.567
Chr02,14930492,SNP_0108,A,C,911,good,False,none,0.221,0.255,0.275
Chr02,15126719,SNP_0109,C,T,343,good,False,none,0.656,0.739,0.703
Chr02,15311654,SNP_0110,G,T,188,good,False,none,0.389,0.446,0.274
Chr02,16440870,SNP_0111,C,G,824,good,False,none,0.529,0.498,0.499
Chr02,16471223,SNP_0112,C,G,525,good,False,none,0.833,0.819,0.828
Chr02,17681415,SNP_0113,C,A,931,good,False,none,0.323,0.23,0.249
Chr02,17816364,SNP_0114,T,G,683,good,False,none,0.455,0.512,0.527
Chr02,18577610,SNP_0115,A,C,835,good,False,none,0.353,0.374,0.381
Chr02,18658478,SNP_0116,C,A,181,good,False,none,0.767,0.651,0.663
Chr02,19012573,SNP_0117,G,A,172,good,False,none,0.275,0.27,0.629
Chr02,20189299,SNP_0118,C,G,691,good,False,none,0.562,0.643,0.576
Chr02,20262988,SNP_0119,G,T,259,good,False,none,0.376,0.293,0.539
Chr02,20318108,SNP_0120,T,A,458,good,False,none,0.285,0.198,0.335
Chr03,1030700,SNP_0121,A,T,608,good,False,none,0.551,0.634,0.712
Chr03,1883586,SNP_0122,A,G,518,good,False,none,0.701,0.741,0.776
Chr03,2406210,SNP_0123,C,T,928,good,False,none,0.468,0.674,0.7
Chr03,2463699,SNP_0124,G,C,233,high_missing,False,none,0.542,0.55,0.596
Chr03,3192533,SNP_0125,C,T,941,good,False,none,0.201,0.21,0.127
Chr03,3566620,SNP_0126,A,T,473,good,False,none,0.328,0.486,0.47
Chr03,4386584,SNP_0127,C,A,990,good,False,none,0.655,0.651,0.656
Chr03,4483959,SNP_0128,C,G,133,good,False,none,0.05,0.178,0.196
Chr03,4538398,SNP_0129,G,C,554,good,False,none,0.712,0.742,0.718
Chr03,4656247,SNP_0130,C,T,911,high_missing,False,none,0.895,0.787,0.95
Chr03,4840782,SNP_0131,G,A,503,good,False,none,0.745,0.636,0.612
Chr03,4993884,SNP_0132,A,G,683,good,False,none,0.189,0.377,0.309
Chr03,5086147,SNP_0133,T,C,247,high_missing,False,none,0.105,0.223,0.057
Chr03,5296514,SNP_0134,T,C,585,good,False,none,0.27,0.216,0.356
Chr03,5547990,SNP_0135,A,C,628,good,False,none,0.526,0.67,0.62
Chr03,6036083,SNP_0136,C,G,756,good,False,none,0.331,0.381,0.448
Chr03,6636560,SNP_0137,G,A,547,low_maf,False,none,0.003,0.005,0.002
Chr03,7080872,SNP_0138,A,T,281,good,False,none,0.85,0.865,0.75
Chr03,7284540,SNP_0139,G,C,284,good,False,none,0.705,0.658,0.564
Chr03,7836271,SNP_0140,C,A,760,high_missing,False,none,0.807,0.736,0.715
Chr03,8258637,SNP_0141,T,G,710,good,False,none,0.455,0.449,0.478
Chr03,10046353,SNP_0142,C,T,785,good,False,none,0.614,0.551,0.487
Chr03,10122329,SNP_0143,T,C,532,good,False,none,0.654,0.738,0.673
Chr03,10375532,SNP_0144,C,A,280,good,False,none,0.6,0.617,0.602
Chr03,11196298,SNP_0145,T,A,844,good,False,none,0.2,0.241,0.183
Chr03,11197853,SNP_0146,G,T,998,high_missing,False,none,0.643,0.476,0.622
Chr03,11532300,SNP_0147,A,C,210,good,False,none,0.594,0.539,0.721
Chr03,11718229,SNP_0148,C,T,104,good,False,none,0.776,0.822,0.913
Chr03,11993413,SNP_0149,G,A,945,good,False,none,0.816,0.778,0.814
Chr03,12057498,SNP_0150,G,T,890,good,False,none,0.397,0.452,0.44
Chr03,12304039,SNP_0151,A,G,583,good,False,none,0.384,0.439,0.352
Chr03,12504732,SNP_0152,G,C,413,good,False,none,0.11,0.329,0.39
Chr03,12509979,SNP_0153,T,C,288,good,False,none,0.304,0.563,0.572
Chr03,12730455,SNP_0154,A,C,504,good,False,none,0.754,0.793,0.801
Chr03,12943652,SNP_0155,G,A,797,good,False,none,0.463,0.323,0.438
Chr03,13179658,SNP_0156,T,A,346,good,False,none,0.704,0.827,0.749
Chr03,13683554,SNP_0157,C,T,636,good,False,none,0.05,0.255,0.203
Chr03,14408107,SNP_0158,C,T,494,good,False,none,0.321,0.235,0.2
Chr03,14809166,SNP_0159,C,T,733,good,False,none,0.638,0.516,0.476
Chr03,15270766,SNP_0160,T,A,107,good,False,none,0.535,0.513,0.521
Chr03,15468292,SNP_0161,A,T,550,good,False,none,0.134,0.349,0.204
Chr03,15538014,SNP_0162,A,C,725,good,False,none,0.235,0.264,0.178
Chr03,15603032,SNP_0163,A,C,198,good,False,none,0.859,0.846,0.836
Chr03,15730571,SNP_0164,T,G,628,good,False,none,0.656,0.637,0.658
Chr03,16059048,SNP_0165,A,T,973,good,False,none,0.447,0.541,0.486
Chr03,16433959,SNP_0166,G,C,619,good,False,none,0.49,0.456,0.578
Chr03,16637262,SNP_0167,T,G,262,good,False,none,0.203,0.375,0.296
Chr03,17267152,SNP_0168,A,T,738,good,False,none,0.639,0.704,0.763
Chr03,17623526,SNP_0169,A,T,925,good,False,none,0.673,0.697,0.709
Chr03,18091600,SNP_0170,A,C,844,good,False,none,0.665,0.67,0.678
Chr03,18195943,SNP_0171,T,A,233,good,False,none,0.63,0.578,0.573
Chr03,18394148,SNP_0172,A,C,346,good,False,none,0.571,0.546,0.577
Chr03,18642124,SNP_0173,G,A,939,good,False,none,0.228,0.245,0.201
Chr03,18977484,SNP_0174,A,C,424,good,False,none,0.459,0.399,0.467
Chr03,19039964,SNP_0175,T,C,360,low_maf,False,none,0.001,0.003,0.003
Chr03,19060601,SNP_0176,A,T,393,good,False,none,0.868,0.756,0.862
Chr03,19277140,SNP_0177,A,T,848,high_missing,False,none,0.343,0.402,0.316
Chr03,19524151,SNP_0178,T,G,874,good,False,none,0.387,0.412,0.395
Chr03,19784378,SNP_0179,A,G,719,good,False,none,0.268,0.322,0.522
Chr03,19785184,SNP_0180,T,C,377,good,False,none,0.221,0.077,0.204
Chr04,470785,SNP_0181,A,G,198,high_missing,False,none,0.357,0.206,0.05
Chr04,508390,SNP_0182,T,G,229,good,False,none,0.315,0.552,0.365
Chr04,683176,SNP_0183,C,A,949,good,False,none,0.335,0.205,0.349
Chr04,763495,SNP_0184,T,A,830,good,False,none,0.914,0.816,0.877
Chr04,1039823,SNP_0185,T,G,410,good,False,none,0.524,0.574,0.516
Chr04,1222252,SNP_0186,C,A,626,good,False,none,0.235,0.14,0.131
Chr04,1949971,SNP_0187,C,A,251,good,False,none,0.602,0.656,0.814
Chr04,2014651,SNP_0188,G,T,630,good,False,none,0.287,0.26,0.246
Chr04,2058985,SNP_0189,G,C,184,good,False,none,0.706,0.637,0.481
Chr04,2312421,SNP_0190,A,G,722,good,False,none,0.605,0.638,0.57
Chr04,2552516,SNP_0191,G,T,243,low_maf,False,none,0.01,0.006,0.012
Chr04,2787629,SNP_0192,A,T,894,good,False,none,0.477,0.502,0.475
Chr04,2820046,SNP_0193,T,A,890,high_missing,False,none,0.69,0.679,0.701
Chr04,3146426,SNP_0194,A,G,809,good,False,none,0.81,0.85,0.95
Chr04,3226901,SNP_0195,G,A,857,good,False,none,0.709,0.66,0.676
Chr04,3640404,SNP_0196,G,A,386,good,False,none,0.11,0.119,0.221
Chr04,3909109,SNP_0197,T,A,171,low_maf,False,none,0.01,0.003,0.005
Chr04,4238352,SNP_0198,C,G,427,good,False,none,0.158,0.152,0.181
Chr04,5005585,SNP_0199,C,T,793,good,False,none,0.326,0.562,0.424
Chr04,5041042,SNP_0200,T,C,969,good,False,none,0.136,0.104,0.086
Chr04,5123819,SNP_0201,C,T,832,good,False,none,0.596,0.432,0.509
Chr04,5570032,SNP_0202,T,A,752,good,False,none,0.683,0.481,0.478
Chr04,5868204,SNP_0203,C,G,791,good,False,none,0.3,0.316,0.05
Chr04,6534698,SNP_0204,A,C,411,good,False,none,0.553,0.53,0.538
Chr04,7944343,SNP_0205,A,G,790,good,False,none,0.636,0.625,0.597
Chr04,8051757,SNP_0206,A,T,367,good,False,none,0.627,0.662,0.773
Chr04,8476686,SNP_0207,A,G,211,low_maf,False,none,0.005,0.004,0.002
Chr04,8758463,SNP_0208,C,A,740,good,False,none,0.564,0.524,0.582
Chr04,9160092,SNP_0209,G,C,539,high_missing,False,none,0.541,0.358,0.475
Chr04,9265139,SNP_0210,T,C,973,good,False,none,0.815,0.661,0.745
Chr04,9387231,SNP_0211,G,A,175,good,False,none,0.169,0.079,0.213
Chr04,9951934,SNP_0212,T,A,426,good,False,none,0.549,0.491,0.442
Chr04,10512499,SNP_0213,C,T,327,good,False,none,0.845,0.846,0.95
Chr04,11369931,SNP_0214,T,C,757,good,False,none,0.448,0.44,0.449
Chr04,12008018,SNP_0215,A,G,618,good,False,none,0.696,0.82,0.71
Chr04,12404349,SNP_0216,T,A,499,good,False,none,0.801,0.776,0.637
Chr04,12497101,SNP_0217,C,A,816,good,False,none,0.597,0.584,0.495
Chr04,12568228,SNP_0218,T,C,741,good,False,none,0.113,0.233,0.119
Chr04,12988500,SNP_0219,A,G,274,good,False,none,0.249,0.229,0.247
Chr04,13502894,SNP_0220,G,C,217,good,False,none,0.867,0.881,0.789
Chr04,13821453,SNP_0221,G,C,389,good,False,none,0.715,0.515,0.507
Chr04,13933561,SNP_0222,A,G,984,good,False,none,0.632,0.495,0.566
Chr04,14643288,SNP_0223,T,A,437,good,False,none,0.808,0.776,0.785
Chr04,14665432,SNP_0224,G,T,363,good,False,none,0.204,0.221,0.105
Chr04,15135636,SNP_0225,T,C,926,good,False,none,0.425,0.422,0.434
Chr04,15172180,SNP_0226,A,G,846,good,False,none,0.3,0.308,0.253
Chr04,15264143,SNP_0227,T,C,601,good,False,none,0.715,0.469,0.49
Chr04,15725911,SNP_0228,T,A,965,good,False,none,0.573,0.606,0.551
Chr04,15780770,SNP_0229,A,C,827,good,False,none,0.328,0.424,0.422
Chr04,16130690,SNP_0230,T,G,540,high_missing,False,none,0.47,0.441,0.467
Chr04,16377754,SNP_0231,G,C,822,good,False,none,0.733,0.66,0.591
Chr04,16658686,SNP_0232,C,A,738,good,False,none,0.05,0.201,0.219
Chr04,16847958,SNP_0233,A,C,959,good,False,none,0.33,0.357,0.332
Chr04,16857502,SNP_0234,A,C,215,good,False,none,0.841,0.728,0.61
Chr04,17227317,SNP_0235,G,T,391,good,False,none,0.283,0.204,0.204
Chr04,17856151,SNP_0236,G,T,490,good,False,none,0.95,0.874,0.835
Chr04,18092811,SNP_0237,C,A,600,good,False,none,0.362,0.34,0.322
Chr04,18109217,SNP_0238,A,C,735,good,True,tag_LD,0.414,0.346,0.347
Chr04,18487979,SNP_0239,A,T,758,good,True,tag_LD,0.414,0.346,0.322
Chr04,18967397,SNP_0240,A,C,800,good,True,causal,0.376,0.386,0.332
Chr05,29376,SNP_0241,G,A,145,good,False,none,0.744,0.785,0.87
Chr05,106533,SNP_0242,A,C,120,high_missing,False,none,0.457,0.573,0.406
Chr05,251320,SNP_0243,G,C,579,good,False,none,0.57,0.571,0.605
Chr05,572693,SNP_0244,A,T,497,good,False,none,0.686,0.759,0.719
Chr05,939448,SNP_0245,T,C,278,good,False,none,0.67,0.847,0.735
Chr05,953348,SNP_0246,A,T,897,good,False,none,0.699,0.724,0.733
Chr05,1177400,SNP_0247,T,C,161,good,False,none,0.067,0.238,0.126
Chr05,1374984,SNP_0248,G,T,994,good,False,none,0.573,0.554,0.555
Chr05,1543231,SNP_0249,G,A,422,good,False,none,0.313,0.46,0.585
Chr05,1610248,SNP_0250,T,C,422,good,False,none,0.32,0.199,0.05
Chr05,1644037,SNP_0251,A,G,441,good,False,none,0.451,0.651,0.597
Chr05,1844740,SNP_0252,A,T,475,high_missing,False,none,0.37,0.359,0.503
Chr05,2008439,SNP_0253,A,G,817,good,False,none,0.202,0.182,0.292
Chr05,2190070,SNP_0254,A,G,573,high_missing,False,none,0.77,0.645,0.779
Chr05,2309621,SNP_0255,A,C,436,good,False,none,0.722,0.627,0.619
Chr05,2663627,SNP_0256,C,T,156,good,False,none,0.466,0.514,0.611
Chr05,2869258,SNP_0257,C,A,899,good,False,none,0.509,0.488,0.413
Chr05,3238044,SNP_0258,C,A,398,good,False,none,0.15,0.35,0.302
Chr05,3732945,SNP_0259,G,A,772,good,False,none,0.531,0.508,0.519
Chr05,3765053,SNP_0260,C,T,688,good,False,none,0.764,0.591,0.95
Chr05,4020004,SNP_0261,T,A,458,high_missing,False,none,0.268,0.608,0.312
Chr05,4105618,SNP_0262,A,G,321,good,False,none,0.746,0.553,0.699
Chr05,4509849,SNP_0263,A,G,728,good,False,none,0.274,0.217,0.142
Chr05,4652218,SNP_0264,A,G,625,low_maf,False,none,0.005,0.007,0.006
Chr05,4694242,SNP_0265,G,C,224,high_missing,False,none,0.723,0.716,0.72
Chr05,4775146,SNP_0266,G,C,302,low_maf,False,none,0.018,0.017,0.018
Chr05,5060811,SNP_0267,C,G,928,good,False,none,0.655,0.657,0.664
Chr05,5280474,SNP_0268,T,G,238,good,False,none,0.223,0.342,0.324
Chr05,5854147,SNP_0269,C,A,218,good,False,none,0.45,0.849,0.546
Chr05,5858406,SNP_0270,C,T,189,good,False,none,0.103,0.297,0.155
Chr05,6063232,SNP_0271,G,T,600,low_maf,False,none,0.012,0.014,0.014
Chr05,6217057,SNP_0272,G,C,984,good,False,none,0.111,0.121,0.101
Chr05,6270676,SNP_0273,T,G,298,good,False,none,0.325,0.312,0.103
Chr05,6591590,SNP_0274,T,G,497,good,False,none,0.788,0.666,0.63
Chr05,6685020,SNP_0275,G,A,176,low_maf,False,none,0.011,0.019,0.014
Chr05,6846218,SNP_0276,C,A,302,low_maf,False,none,0.008,0.004,0.005
Chr05,6957108,SNP_0277,T,A,180,good,False,none,0.663,0.69,0.627
Chr05,7109799,SNP_0278,G,T,372,good,False,none,0.674,0.65,0.704
Chr05,7162862,SNP_0279,T,A,465,good,False,none,0.865,0.832,0.87
Chr05,7868330,SNP_0280,A,G,949,good,False,none,0.145,0.093,0.112
Chr05,8570510,SNP_0281,T,A,190,good,False,none,0.359,0.206,0.052
Chr05,8598665,SNP_0282,T,G,221,good,False,none,0.853,0.728,0.95
Chr05,9899361,SNP_0283,T,C,977,good,False,none,0.696,0.666,0.647
Chr05,10038901,SNP_0284,C,A,982,good,False,none,0.124,0.139,0.123
Chr05,10409447,SNP_0285,G,A,192,good,False,none,0.656,0.704,0.552
Chr05,11299277,SNP_0286,C,G,471,good,False,none,0.714,0.716,0.703
Chr05,11568190,SNP_0287,A,G,466,good,False,none,0.809,0.915,0.819
Chr05,11957499,SNP_0288,G,C,635,good,False,none,0.66,0.596,0.606
Chr05,12011571,SNP_0289,T,A,138,good,False,none,0.312,0.581,0.333
Chr05,13103212,SNP_0290,G,C,442,high_missing,False,none,0.705,0.76,0.782
Chr05,13191578,SNP_0291,T,C,268,good,False,none,0.662,0.807,0.632
Chr05,14583113,SNP_0292,T,G,965,good,False,none,0.213,0.215,0.197
Chr05,14981777,SNP_0293,G,A,711,good,False,none,0.253,0.174,0.136
Chr05,15167381,SNP_0294,T,A,180,good,False,none,0.082,0.092,0.178
Chr05,15707595,SNP_0295,G,A,774,high_missing,False,none,0.621,0.609,0.604
Chr05,15875552,SNP_0296,C,G,301,good,False,none,0.35,0.263,0.23
Chr05,16225019,SNP_0297,G,A,453,good,False,none,0.651,0.73,0.7
Chr05,17448433,SNP_0298,C,T,671,good,False,none,0.596,0.469,0.39
Chr05,17831185,SNP_0299,C,T,356,good,False,none,0.814,0.831,0.831
Chr05,18415488,SNP_0300,T,G,460,low_maf,False,none,0.018,0.017,0.014
Chr06,542198,SNP_0301,C,G,450,good,False,none,0.574,0.615,0.62
Chr06,609836,SNP_0302,G,A,158,good,False,none,0.313,0.287,0.313
Chr06,1091847,SNP_0303,A,G,703,good,False,none,0.41,0.426,0.22
Chr06,2041956,SNP_0304,C,A,792,good,False,none,0.515,0.602,0.39
Chr06,2538176,SNP_0305,G,A,600,high_missing,False,none,0.739,0.765,0.683
Chr06,2658838,SNP_0306,C,G,477,good,False,none,0.477,0.461,0.517
Chr06,2870614,SNP_0307,G,C,925,good,False,none,0.644,0.639,0.633
Chr06,3063757,SNP_0308,A,G,976,good,False,none,0.821,0.857,0.85
Chr06,3142930,SNP_0309,T,G,923,good,False,none,0.279,0.368,0.2
Chr06,3334319,SNP_0310,T,C,626,good,False,none,0.404,0.294,0.228
Chr06,3795938,SNP_0311,A,C,243,good,False,none,0.253,0.171,0.161
Chr06,4182588,SNP_0312,C,T,712,good,False,none,0.37,0.477,0.425
Chr06,4427263,SNP_0313,A,G,781,good,False,none,0.714,0.785,0.684
Chr06,4697652,SNP_0314,G,T,828,good,False,none,0.297,0.198,0.191
Chr06,4721342,SNP_0315,C,G,411,low_maf,False,none,0.01,0.007,0.009
Chr06,5159409,SNP_0316,A,T,664,good,False,none,0.574,0.543,0.334
Chr06,5171161,SNP_0317,G,T,326,good,False,none,0.615,0.684,0.656
Chr06,5543245,SNP_0318,G,C,160,good,False,none,0.898,0.859,0.938
Chr06,5732542,SNP_0319,C,A,105,good,False,none,0.791,0.769,0.761
Chr06,5938520,SNP_0320,G,C,996,high_missing,False,none,0.448,0.58,0.596
Chr06,5974841,SNP_0321,C,T,644,low_maf,False,none,0.009,0.009,0.014
Chr06,6278785,SNP_0322,C,G,251,good,False,none,0.435,0.259,0.378
Chr06,6450821,SNP_0323,A,C,547,high_missing,False,none,0.309,0.336,0.308
Chr06,6465382,SNP_0324,A,C,165,good,False,none,0.71,0.86,0.821
Chr06,6486197,SNP_0325,A,G,404,good,False,none,0.406,0.298,0.409
Chr06,6643514,SNP_0326,G,C,981,low_maf,False,none,0.006,0.008,0.001
Chr06,7316097,SNP_0327,T,A,341,good,False,none,0.808,0.822,0.695
Chr06,7947929,SNP_0328,G,C,924,good,False,none,0.687,0.734,0.667
Chr06,8062014,SNP_0329,C,G,265,good,False,none,0.789,0.859,0.646
Chr06,8244528,SNP_0330,T,G,656,good,False,none,0.134,0.117,0.088
Chr06,8600426,SNP_0331,A,C,119,good,False,none,0.528,0.554,0.453
Chr06,8941491,SNP_0332,A,T,600,good,False,none,0.65,0.754,0.735
Chr06,9067283,SNP_0333,G,T,926,good,False,none,0.224,0.245,0.223
Chr06,9274768,SNP_0334,G,T,812,good,False,none,0.258,0.252,0.274
Chr06,9847961,SNP_0335,A,C,889,low_maf,False,none,0.014,0.006,0.007
Chr06,9963873,SNP_0336,C,T,940,high_missing,False,none,0.911,0.876,0.848
Chr06,10019616,SNP_0337,A,C,543,good,False,none,0.439,0.455,0.423
Chr06,10044798,SNP_0338,C,G,897,good,False,none,0.661,0.724,0.805
Chr06,10656952,SNP_0339,A,T,910,high_missing,False,none,0.547,0.581,0.541
Chr06,10727454,SNP_0340,T,G,548,good,False,none,0.236,0.279,0.263
Chr06,10908200,SNP_0341,G,T,909,good,False,none,0.447,0.587,0.536
Chr06,11142623,SNP_0342,A,C,612,good,False,none,0.33,0.323,0.337
Chr06,12130912,SNP_0343,G,A,282,good,False,none,0.31,0.182,0.303
Chr06,12487676,SNP_0344,C,T,387,good,False,none,0.804,0.876,0.863
Chr06,13218726,SNP_0345,G,T,160,low_maf,False,none,0.012,0.017,0.012
Chr06,13415218,SNP_0346,G,T,692,good,False,none,0.63,0.555,0.55
Chr06,13857152,SNP_0347,A,T,279,good,False,none,0.475,0.504,0.403
Chr06,14161017,SNP_0348,A,C,943,good,False,none,0.533,0.512,0.542
Chr06,14202253,SNP_0349,A,T,356,good,False,none,0.703,0.864,0.829
Chr06,14296477,SNP_0350,A,G,367,good,False,none,0.05,0.207,0.199
Chr06,15066365,SNP_0351,A,C,750,good,False,none,0.823,0.82,0.795
Chr06,15416479,SNP_0352,A,T,147,good,False,none,0.476,0.377,0.373
Chr06,15870994,SNP_0353,T,G,864,good,False,none,0.913,0.914,0.872
Chr06,16048292,SNP_0354,T,A,308,good,False,none,0.493,0.523,0.474
Chr06,16597424,SNP_0355,A,G,262,good,False,none,0.461,0.459,0.33
Chr06,16809948,SNP_0356,A,C,314,good,False,none,0.471,0.158,0.469
Chr06,16851616,SNP_0357,C,G,552,good,False,none,0.868,0.917,0.835
Chr06,17558893,SNP_0358,A,C,586,good,False,none,0.691,0.583,0.582
Chr06,17951260,SNP_0359,G,C,181,good,False,none,0.252,0.383,0.228
Chr06,18094211,SNP_0360,T,G,923,good,False,none,0.529,0.576,0.537
Chr07,47067,SNP_0361,G,A,829,good,False,none,0.262,0.24,0.255
Chr07,384158,SNP_0362,A,G,998,good,False,none,0.796,0.763,0.926
Chr07,680266,SNP_0363,C,T,201,good,False,none,0.464,0.496,0.462
Chr07,1507892,SNP_0364,A,T,895,good,False,none,0.405,0.397,0.426
Chr07,1590931,SNP_0365,G,T,440,good,False,none,0.219,0.25,0.254
Chr07,1845775,SNP_0366,A,G,572,good,False,none,0.398,0.491,0.444
Chr07,1855604,SNP_0367,A,T,592,good,False,none,0.228,0.315,0.463
Chr07,1930144,SNP_0368,T,G,658,good,False,none,0.323,0.307,0.258
Chr07,2583450,SNP_0369,G,T,153,good,False,none,0.479,0.46,0.488
Chr07,2832813,SNP_0370,C,T,874,good,False,none,0.648,0.475,0.753
Chr07,3048637,SNP_0371,A,G,293,good,False,none,0.785,0.738,0.669
Chr07,3123642,SNP_0372,A,G,745,good,False,none,0.161,0.132,0.327
Chr07,3806206,SNP_0373,G,T,895,good,False,none,0.702,0.678,0.787
Chr07,4017931,SNP_0374,T,A,974,good,False,none,0.199,0.108,0.111
Chr07,4020125,SNP_0375,G,C,854,good,False,none,0.663,0.657,0.786
Chr07,4226948,SNP_0376,A,T,747,high_missing,False,none,0.53,0.556,0.512
Chr07,4709951,SNP_0377,C,G,610,high_missing,False,none,0.844,0.879,0.727
Chr07,5173317,SNP_0378,A,T,718,low_maf,False,none,0.021,0.017,0.019
Chr07,5343444,SNP_0379,T,G,226,good,False,none,0.791,0.773,0.834
Chr07,5550181,SNP_0380,C,G,240,good,False,none,0.501,0.477,0.532
Chr07,5641708,SNP_0381,T,C,655,low_maf,False,none,0.015,0.014,0.013
Chr07,5890914,SNP_0382,T,A,617,good,False,none,0.735,0.648,0.678
Chr07,6005600,SNP_0383,A,G,225,good,False,none,0.304,0.396,0.353
Chr07,6429809,SNP_0384,G,A,832,good,False,none,0.741,0.59,0.578
Chr07,6662465,SNP_0385,C,T,343,good,False,none,0.255,0.231,0.293
Chr07,6868810,SNP_0386,A,C,564,good,False,none,0.692,0.736,0.729
Chr07,7028377,SNP_0387,T,G,545,low_maf,False,none,0.009,0.01,0.012
Chr07,7630244,SNP_0388,G,T,710,good,False,none,0.873,0.832,0.859
Chr07,7955320,SNP_0389,T,G,161,good,False,none,0.521,0.506,0.517
Chr07,8021519,SNP_0390,A,C,356,good,False,none,0.898,0.746,0.815
Chr07,8332204,SNP_0391,A,G,387,good,False,none,0.902,0.847,0.894
Chr07,8867154,SNP_0392,G,C,496,good,False,none,0.76,0.702,0.69
Chr07,9125913,SNP_0393,T,A,706,good,False,none,0.262,0.272,0.278
Chr07,9165448,SNP_0394,C,T,487,good,False,none,0.279,0.05,0.201
Chr07,9892461,SNP_0395,G,A,627,good,False,none,0.281,0.461,0.321
Chr07,10667933,SNP_0396,T,G,593,good,False,none,0.704,0.671,0.617
Chr07,10789942,SNP_0397,A,G,582,good,False,none,0.585,0.676,0.681
Chr07,11108735,SNP_0398,C,T,860,good,False,none,0.371,0.373,0.387
Chr07,11111438,SNP_0399,A,T,429,low_maf,False,none,0.009,0.013,0.009
Chr07,11500305,SNP_0400,C,A,731,good,False,none,0.755,0.787,0.767
Chr07,11750157,SNP_0401,C,A,544,good,False,none,0.829,0.797,0.806
Chr07,11878819,SNP_0402,T,A,982,good,False,none,0.743,0.812,0.838
Chr07,11892598,SNP_0403,G,A,479,high_missing,False,none,0.651,0.561,0.613
Chr07,12113918,SNP_0404,T,C,711,good,False,none,0.809,0.794,0.86
Chr07,12552887,SNP_0405,G,A,904,good,False,none,0.668,0.873,0.863
Chr07,12618094,SNP_0406,G,A,387,good,False,none,0.836,0.83,0.773
Chr07,12708700,SNP_0407,C,G,496,good,False,none,0.759,0.702,0.797
Chr07,12977004,SNP_0408,T,G,356,good,False,none,0.721,0.613,0.631
Chr07,13188133,SNP_0409,C,A,569,high_missing,False,none,0.461,0.481,0.523
Chr07,13233298,SNP_0410,G,T,276,good,False,none,0.525,0.488,0.505
Chr07,13426975,SNP_0411,G,T,430,good,False,none,0.832,0.929,0.821
Chr07,13741720,SNP_0412,A,C,334,good,False,none,0.269,0.05,0.154
Chr07,13980150,SNP_0413,A,T,562,good,False,none,0.429,0.355,0.454
Chr07,14101877,SNP_0414,T,A,629,good,False,none,0.611,0.717,0.604
Chr07,14644318,SNP_0415,T,G,341,good,False,none,0.881,0.841,0.755
Chr07,15893093,SNP_0416,G,T,512,good,False,none,0.426,0.444,0.367
Chr07,16444240,SNP_0417,C,A,238,good,False,none,0.763,0.895,0.95
Chr07,16977922,SNP_0418,A,G,650,good,False,none,0.258,0.253,0.281
Chr07,17618653,SNP_0419,A,T,390,good,False,none,0.363,0.363,0.36
Chr07,17858358,SNP_0420,C,A,157,good,False,none,0.106,0.141,0.101
Chr08,803481,SNP_0421,T,C,885,good,False,none,0.91,0.95,0.77
Chr08,975540,SNP_0422,C,G,844,good,False,none,0.205,0.152,0.124
Chr08,1090400,SNP_0423,G,A,198,good,False,none,0.248,0.278,0.28
Chr08,1195568,SNP_0424,G,T,307,good,False,none,0.762,0.535,0.651
Chr08,2257376,SNP_0425,C,G,542,good,False,none,0.876,0.889,0.822
Chr08,2429010,SNP_0426,T,A,586,low_maf,False,none,0.01,0.01,0.011
Chr08,2706255,SNP_0427,C,T,865,good,False,none,0.398,0.431,0.419
Chr08,3634216,SNP_0428,T,G,599,good,False,none,0.622,0.54,0.658
Chr08,3675287,SNP_0429,A,G,618,good,False,none,0.162,0.25,0.275
Chr08,3713646,SNP_0430,C,G,304,good,False,none,0.454,0.332,0.393
Chr08,4001080,SNP_0431,G,A,603,good,False,none,0.354,0.323,0.412
Chr08,4148037,SNP_0432,T,C,433,good,False,none,0.419,0.561,0.513
Chr08,4523918,SNP_0433,C,G,543,good,False,none,0.291,0.316,0.182
Chr08,4944340,SNP_0434,A,C,797,good,False,none,0.342,0.35,0.328
Chr08,5144967,SNP_0435,T,A,109,good,False,none,0.377,0.392,0.393
Chr08,5446493,SNP_0436,A,C,931,good,False,none,0.187,0.052,0.14
Chr08,6250946,SNP_0437,C,A,458,good,False,none,0.499,0.41,0.493
Chr08,7084636,SNP_0438,A,C,720,good,False,none,0.198,0.303,0.234
Chr08,7281070,SNP_0439,C,G,391,low_maf,False,none,0.013,0.012,0.011
Chr08,7505656,SNP_0440,A,T,793,good,False,none,0.627,0.683,0.622
Chr08,7617188,SNP_0441,C,T,908,good,False,none,0.198,0.194,0.393
Chr08,7671227,SNP_0442,G,A,195,good,False,none,0.404,0.293,0.417
Chr08,7905200,SNP_0443,G,C,106,good,False,none,0.685,0.678,0.652
Chr08,8054331,SNP_0444,G,T,971,good,False,none,0.337,0.329,0.328
Chr08,8063741,SNP_0445,A,T,172,good,False,none,0.423,0.317,0.44
Chr08,8339403,SNP_0446,A,G,905,good,False,none,0.265,0.306,0.346
Chr08,8683011,SNP_0447,A,G,455,high_missing,False,none,0.849,0.869,0.812
Chr08,8935442,SNP_0448,T,A,624,high_missing,False,none,0.745,0.868,0.761
Chr08,8965120,SNP_0449,T,G,223,good,False,none,0.198,0.064,0.096
Chr08,9205190,SNP_0450,G,A,801,high_missing,False,none,0.563,0.623,0.57
Chr08,9304047,SNP_0451,T,A,290,good,False,none,0.277,0.277,0.272
Chr08,9349237,SNP_0452,T,G,937,good,False,none,0.189,0.299,0.171
Chr08,9484839,SNP_0453,T,C,471,good,False,none,0.6,0.899,0.916
Chr08,10081796,SNP_0454,A,T,837,good,False,none,0.587,0.383,0.357
Chr08,10439946,SNP_0455,A,C,362,good,False,none,0.702,0.707,0.697
Chr08,10527835,SNP_0456,C,A,854,good,False,none,0.135,0.144,0.202
Chr08,10689506,SNP_0457,A,T,605,low_maf,False,none,0.002,0.011,0.004
Chr08,10707716,SNP_0458,A,G,284,good,False,none,0.719,0.686,0.585
Chr08,10739381,SNP_0459,A,C,848,high_missing,False,none,0.291,0.292,0.343
Chr08,11935775,SNP_0460,T,A,416,good,False,none,0.731,0.848,0.896
Chr08,12043788,SNP_0461,C,G,328,high_missing,False,none,0.68,0.723,0.731
Chr08,12464124,SNP_0462,G,T,555,low_maf,False,none,0.015,0.011,0.015
Chr08,13298933,SNP_0463,A,T,512,good,False,none,0.141,0.123,0.137
Chr08,13678747,SNP_0464,T,A,571,good,False,none,0.257,0.07,0.101
Chr08,13740804,SNP_0465,C,T,497,low_maf,False,none,0.007,0.004,0.012
Chr08,13922170,SNP_0466,C,T,214,high_missing,False,none,0.519,0.655,0.503
Chr08,14326987,SNP_0467,A,C,699,good,False,none,0.181,0.231,0.272
Chr08,14450973,SNP_0468,C,A,927,good,False,none,0.143,0.131,0.146
Chr08,14465859,SNP_0469,A,G,222,good,False,none,0.484,0.393,0.385
Chr08,14772810,SNP_0470,T,C,815,good,False,none,0.305,0.34,0.559
Chr08,15044355,SNP_0471,T,G,439,low_maf,False,none,0.001,0.006,0.005
Chr08,15052219,SNP_0472,G,A,398,good,False,none,0.207,0.264,0.28
Chr08,15093153,SNP_0473,T,G,921,low_maf,False,none,0.015,0.018,0.017
Chr08,15397825,SNP_0474,T,A,194,good,False,none,0.375,0.346,0.346
Chr08,15532567,SNP_0475,C,T,829,good,False,none,0.443,0.308,0.535
Chr08,15722336,SNP_0476,G,T,829,good,False,none,0.489,0.409,0.501
Chr08,15751683,SNP_0477,C,G,452,low_maf,False,none,0.007,0.008,0.016
Chr08,15891433,SNP_0478,A,T,226,low_maf,False,none,0.004,0.002,0.007
Chr08,16972447,SNP_0479,G,T,938,good,False,none,0.614,0.443,0.631
Chr08,17086841,SNP_0480,A,T,571,good,False,none,0.368,0.387,0.281
Chr09,5072,SNP_0481,C,T,127,good,False,none,0.199,0.077,0.191
Chr09,95525,SNP_0482,A,G,253,good,False,none,0.64,0.484,0.449
Chr09,309223,SNP_0483,A,C,541,good,False,none,0.145,0.194,0.209
Chr09,536034,SNP_0484,A,T,722,good,False,none,0.415,0.446,0.441
Chr09,851243,SNP_0485,C,A,675,good,False,none,0.13,0.051,0.22
Chr09,1248229,SNP_0486,C,A,192,good,False,none,0.748,0.682,0.651
Chr09,1490070,SNP_0487,G,C,268,good,False,none,0.728,0.613,0.485
Chr09,1521641,SNP_0488,T,A,223,good,False,none,0.675,0.496,0.819
Chr09,1733093,SNP_0489,G,T,545,good,False,none,0.651,0.504,0.433
Chr09,1833908,SNP_0490,G,A,206,good,False,none,0.339,0.365,0.351
Chr09,2108378,SNP_0491,A,T,866,good,False,none,0.139,0.271,0.246
Chr09,2578698,SNP_0492,A,T,786,good,False,none,0.282,0.298,0.372
Chr09,2644756,SNP_0493,A,T,520,good,False,none,0.442,0.505,0.451
Chr09,2694916,SNP_0494,T,A,842,good,False,none,0.316,0.3,0.3
Chr09,2961942,SNP_0495,A,T,388,good,False,none,0.839,0.767,0.806
Chr09,3444121,SNP_0496,T,G,192,high_missing,False,none,0.502,0.429,0.529
Chr09,3592625,SNP_0497,T,A,581,good,False,none,0.347,0.062,0.25
Chr09,3616996,SNP_0498,C,A,732,good,False,none,0.618,0.598,0.665
Chr09,3620743,SNP_0499,A,G,376,good,False,none,0.643,0.756,0.748
Chr09,3709106,SNP_0500,A,C,814,high_missing,False,none,0.814,0.88,0.873
Chr09,3858929,SNP_0501,T,C,324,good,False,none,0.883,0.892,0.823
Chr09,4249843,SNP_0502,C,T,243,good,False,none,0.325,0.273,0.321
Chr09,4677743,SNP_0503,G,A,981,good,False,none,0.88,0.807,0.846
Chr09,4704770,SNP_0504,A,T,559,good,False,none,0.867,0.712,0.712
Chr09,4787876,SNP_0505,G,A,608,good,False,none,0.843,0.853,0.914
Chr09,4927069,SNP_0506,T,A,538,good,False,none,0.22,0.165,0.191
Chr09,5817035,SNP_0507,T,C,211,good,False,none,0.811,0.655,0.784
Chr09,6827411,SNP_0508,A,G,179,good,False,none,0.207,0.219,0.27
Chr09,6957577,SNP_0509,G,A,778,good,False,none,0.509,0.599,0.758
Chr09,8492397,SNP_0510,C,T,681,good,False,none,0.909,0.646,0.906
Chr09,8509010,SNP_0511,T,C,116,good,False,none,0.797,0.873,0.863
Chr09,8682020,SNP_0512,C,T,773,good,False,none,0.472,0.481,0.486
Chr09,9567599,SNP_0513,G,C,742,good,False,none,0.821,0.797,0.844
Chr09,9744018,SNP_0514,A,T,996,low_maf,False,none,0.01,0.017,0.01
Chr09,9813654,SNP_0515,T,C,303,good,False,none,0.547,0.553,0.577
Chr09,9936215,SNP_0516,A,T,940,good,False,none,0.146,0.05,0.16
Chr09,9982061,SNP_0517,C,T,257,good,False,none,0.614,0.651,0.634
Chr09,10093164,SNP_0518,C,G,204,good,False,none,0.95,0.829,0.826
Chr09,10115473,SNP_0519,T,G,826,good,False,none,0.736,0.734,0.743
Chr09,10782742,SNP_0520,A,C,725,high_missing,False,none,0.547,0.481,0.697
Chr09,11300256,SNP_0521,A,C,330,good,False,none,0.886,0.929,0.799
Chr09,11800347,SNP_0522,G,C,730,good,False,none,0.296,0.217,0.221
Chr09,12113209,SNP_0523,G,C,713,good,False,none,0.459,0.348,0.53
Chr09,12361432,SNP_0524,C,A,905,high_missing,False,none,0.837,0.776,0.777
Chr09,12601722,SNP_0525,T,A,100,good,False,none,0.646,0.534,0.453
Chr09,12754720,SNP_0526,G,A,263,good,False,none,0.47,0.544,0.519
Chr09,12786647,SNP_0527,A,C,673,good,False,none,0.171,0.184,0.179
Chr09,12900573,SNP_0528,T,A,737,good,False,none,0.501,0.336,0.435
Chr09,13068001,SNP_0529,T,C,742,low_maf,False,none,0.012,0.017,0.02
Chr09,13160839,SNP_0530,A,G,385,good,False,none,0.158,0.142,0.161
Chr09,13234208,SNP_0531,T,A,598,good,False,none,0.866,0.842,0.8
Chr09,14510807,SNP_0532,G,A,179,good,False,none,0.947,0.823,0.765
Chr09,14795117,SNP_0533,C,T,824,high_missing,False,none,0.838,0.884,0.763
Chr09,14816094,SNP_0534,C,T,485,good,False,none,0.841,0.943,0.866
Chr09,14900813,SNP_0535,A,C,356,good,False,none,0.428,0.571,0.399
Chr09,15440604,SNP_0536,T,A,659,good,False,none,0.886,0.886,0.916
Chr09,15561116,SNP_0537,G,A,792,good,False,none,0.346,0.635,0.379
Chr09,15734845,SNP_0538,T,C,665,good,False,none,0.82,0.95,0.795
Chr09,15852797,SNP_0539,C,T,506,good,False,none,0.724,0.909,0.79
Chr09,16211785,SNP_0540,A,T,343,good,False,none,0.771,0.853,0.807
Chr10,407859,SNP_0541,G,C,660,good,False,none,0.505,0.55,0.596
Chr10,429163,SNP_0542,A,C,919,good,False,none,0.813,0.831,0.826
Chr10,598294,SNP_0543,T,G,141,good,False,none,0.383,0.481,0.459
Chr10,1366878,SNP_0544,G,C,650,high_missing,False,none,0.448,0.481,0.443
Chr10,1721729,SNP_0545,C,T,233,good,False,none,0.164,0.138,0.176
Chr10,2115473,SNP_0546,G,T,176,good,False,none,0.484,0.309,0.436
Chr10,2358477,SNP_0547,T,G,353,high_missing,False,none,0.709,0.604,0.778
Chr10,3450537,SNP_0548,G,A,391,good,False,none,0.286,0.283,0.293
Chr10,3585303,SNP_0549,T,A,697,good,False,none,0.865,0.86,0.826
Chr10,3616432,SNP_0550,T,A,255,good,False,none,0.742,0.768,0.683
Chr10,3726933,SNP_0551,C,T,910,low_maf,False,none,0.013,0.014,0.012
Chr10,4061495,SNP_0552,T,G,492,low_maf,False,none,0.009,0.011,0.014
Chr10,4567150,SNP_0553,T,C,425,good,False,none,0.499,0.884,0.39
Chr10,5193930,SNP_0554,C,T,419,high_missing,False,none,0.43,0.471,0.445
Chr10,5369220,SNP_0555,G,A,686,good,False,none,0.425,0.476,0.468
Chr10,5388230,SNP_0556,C,T,709,good,False,none,0.591,0.611,0.61
Chr10,5641447,SNP_0557,C,A,568,good,False,none,0.578,0.566,0.587
Chr10,5748599,SNP_0558,C,T,510,good,False,none,0.464,0.484,0.515
Chr10,5802774,SNP_0559,C,T,426,good,False,none,0.272,0.444,0.745
Chr10,5838327,SNP_0560,G,C,247,good,False,none,0.365,0.447,0.423
Chr10,6585034,SNP_0561,T,A,862,good,False,none,0.601,0.585,0.563
Chr10,6807514,SNP_0562,T,G,137,good,False,none,0.619,0.599,0.516
Chr10,6868606,SNP_0563,A,C,454,good,False,none,0.544,0.496,0.461
Chr10,6883863,SNP_0564,G,T,617,good,False,none,0.782,0.699,0.78
Chr10,7029601,SNP_0565,A,G,496,good,False,none,0.271,0.273,0.271
Chr10,7868224,SNP_0566,C,T,447,good,False,none,0.62,0.576,0.629
Chr10,8651611,SNP_0567,G,A,463,good,False,none,0.328,0.401,0.324
Chr10,8656295,SNP_0568,A,C,435,good,False,none,0.901,0.695,0.783
Chr10,8910411,SNP_0569,A,T,620,good,False,none,0.753,0.92,0.847
Chr10,8966000,SNP_0570,T,C,460,good,False,none,0.757,0.774,0.77
Chr10,8996365,SNP_0571,A,C,417,good,False,none,0.689,0.557,0.68
Chr10,9309783,SNP_0572,A,G,780,low_maf,False,none,0.018,0.014,0.021
Chr10,9371282,SNP_0573,C,G,910,good,False,none,0.568,0.5,0.467
Chr10,9461934,SNP_0574,T,C,263,high_missing,False,none,0.374,0.408,0.078
Chr10,9604741,SNP_0575,A,T,428,good,False,none,0.617,0.704,0.684
Chr10,9753090,SNP_0576,T,A,937,good,False,none,0.356,0.384,0.372
Chr10,9972249,SNP_0577,C,G,426,good,False,none,0.171,0.193,0.279
Chr10,10143972,SNP_0578,A,T,784,good,False,none,0.845,0.946,0.838
Chr10,10416264,SNP_0579,T,A,558,low_maf,False,none,0.007,0.004,0.005
Chr10,10562084,SNP_0580,C,T,217,good,False,none,0.119,0.154,0.109
Chr10,10611830,SNP_0581,C,T,801,good,False,none,0.35,0.232,0.259
Chr10,10831869,SNP_0582,C,T,231,good,False,none,0.542,0.513,0.618
Chr10,11168039,SNP_0583,T,A,964,good,False,none,0.604,0.774,0.714
Chr10,11311087,SNP_0584,T,C,462,good,False,none,0.157,0.177,0.05
Chr10,11553746,SNP_0585,T,G,935,good,False,none,0.894,0.834,0.794
Chr10,11649770,SNP_0586,C,G,544,good,False,none,0.579,0.568,0.577
Chr10,11700718,SNP_0587,A,T,970,good,False,none,0.89,0.751,0.675
Chr10,11783629,SNP_0588,A,C,618,good,False,none,0.653,0.531,0.483
Chr10,12170275,SNP_0589,G,A,728,good,False,none,0.765,0.738,0.753
Chr10,12625955,SNP_0590,G,C,953,good,False,none,0.583,0.612,0.703
Chr10,13044756,SNP_0591,T,A,388,good,False,none,0.178,0.203,0.187
Chr10,13239835,SNP_0592,G,T,776,good,False,none,0.635,0.739,0.607
Chr10,13462855,SNP_0593,A,G,659,low_maf,False,none,0.01,0.009,0.013
Chr10,13635864,SNP_0594,T,C,813,low_maf,False,none,0.008,0.008,0.013
Chr10,14484720,SNP_0595,T,C,871,high_missing,False,none,0.704,0.75,0.816
Chr10,14795820,SNP_0596,C,A,451,good,False,none,0.378,0.39,0.383
Chr10,14833999,SNP_0597,C,T,917,good,False,none,0.539,0.558,0.551
Chr10,14869890,SNP_0598,G,T,936,good,False,none,0.278,0.292,0.138
Chr10,15806705,SNP_0599,G,C,796,good,False,none,0.811,0.772,0.764
Chr10,16746643,SNP_0600,C,T,406,high_missing,False,none,0.339,0.395,0.499
Chr11,110030,SNP_0601,A,G,409,good,False,none,0.529,0.538,0.578
Chr11,614411,SNP_0602,A,G,946,good,False,none,0.569,0.64,0.652
Chr11,743620,SNP_0603,A,T,516,good,False,none,0.541,0.538,0.446
Chr11,818511,SNP_0604,G,C,809,good,False,none,0.774,0.671,0.844
Chr11,890080,SNP_0605,C,T,524,good,False,none,0.257,0.423,0.188
Chr11,1015415,SNP_0606,T,C,160,good,False,none,0.849,0.755,0.847
Chr11,1220245,SNP_0607,G,A,915,good,False,none,0.636,0.255,0.268
Chr11,1476536,SNP_0608,A,T,462,good,False,none,0.471,0.433,0.449
Chr11,1519751,SNP_0609,A,C,904,good,False,none,0.362,0.336,0.34
Chr11,1696796,SNP_0610,A,G,317,good,False,none,0.449,0.447,0.603
Chr11,2096619,SNP_0611,G,A,780,good,False,none,0.891,0.903,0.904
Chr11,2141528,SNP_0612,A,T,211,high_missing,False,none,0.11,0.159,0.178
Chr11,2441701,SNP_0613,A,C,529,good,False,none,0.667,0.55,0.672
Chr11,2913146,SNP_0614,T,C,643,good,False,none,0.295,0.274,0.227
Chr11,3040524,SNP_0615,A,T,613,good,False,none,0.823,0.886,0.899
Chr11,3084178,SNP_0616,T,C,217,high_missing,False,none,0.611,0.678,0.618
Chr11,3571574,SNP_0617,C,T,754,good,False,none,0.449,0.369,0.486
Chr11,4088964,SNP_0618,C,A,288,good,False,none,0.328,0.254,0.331
Chr11,4747880,SNP_0619,T,G,307,low_maf,False,none,0.001,0.008,0.008
Chr11,5263108,SNP_0620,G,T,108,good,False,none,0.582,0.527,0.649
Chr11,5363522,SNP_0621,T,C,782,good,False,none,0.521,0.515,0.617
Chr11,5369950,SNP_0622,T,A,947,low_maf,False,none,0.002,0.006,0.001
Chr11,6254945,SNP_0623,A,G,117,good,False,none,0.326,0.223,0.381
Chr11,6468318,SNP_0624,A,G,402,good,False,none,0.766,0.757,0.758
Chr11,6494720,SNP_0625,G,C,389,good,False,none,0.29,0.392,0.391
Chr11,6747603,SNP_0626,C,A,320,good,False,none,0.498,0.429,0.437
Chr11,7525416,SNP_0627,A,G,245,good,False,none,0.168,0.198,0.183
Chr11,7715846,SNP_0628,T,G,666,good,False,none,0.825,0.875,0.876
Chr11,7745206,SNP_0629,A,T,167,good,False,none,0.353,0.396,0.345
Chr11,8139528,SNP_0630,G,T,954,good,False,none,0.267,0.271,0.34
Chr11,8366771,SNP_0631,C,A,382,good,False,none,0.658,0.568,0.657
Chr11,8868674,SNP_0632,T,A,702,good,False,none,0.196,0.097,0.218
Chr11,9177118,SNP_0633,A,T,997,good,False,none,0.539,0.821,0.791
Chr11,9369583,SNP_0634,T,G,541,good,False,none,0.884,0.882,0.607
Chr11,9522619,SNP_0635,A,T,648,good,False,none,0.059,0.174,0.096
Chr11,10283098,SNP_0636,T,C,184,good,False,none,0.586,0.497,0.572
Chr11,11164314,SNP_0637,G,T,397,good,False,none,0.809,0.714,0.816
Chr11,11174481,SNP_0638,G,A,879,good,False,none,0.381,0.359,0.371
Chr11,11814975,SNP_0639,C,A,408,good,False,none,0.186,0.443,0.441
Chr11,11835799,SNP_0640,T,A,179,good,False,none,0.597,0.631,0.544
Chr11,11836219,SNP_0641,T,A,271,good,False,none,0.79,0.721,0.797
Chr11,11849562,SNP_0642,G,C,455,good,False,none,0.491,0.404,0.439
Chr11,11892369,SNP_0643,G,C,989,low_maf,False,none,0.001,0.001,0.001
Chr11,12189681,SNP_0644,T,C,754,good,False,none,0.483,0.267,0.293
Chr11,12371201,SNP_0645,G,T,135,low_maf,False,none,0.005,0.002,0.004
Chr11,12513338,SNP_0646,A,T,251,good,False,none,0.206,0.05,0.297
Chr11,12992834,SNP_0647,C,A,261,low_maf,False,none,0.007,0.008,0.004
Chr11,13114682,SNP_0648,T,G,766,good,False,none,0.319,0.325,0.292
Chr11,13414812,SNP_0649,C,T,772,good,False,none,0.413,0.741,0.491
Chr11,13420071,SNP_0650,T,A,869,good,False,none,0.337,0.385,0.342
Chr11,13583850,SNP_0651,C,A,296,high_missing,False,none,0.739,0.522,0.692
Chr11,14092970,SNP_0652,A,T,716,good,False,none,0.252,0.249,0.252
Chr11,14228216,SNP_0653,T,G,711,good,False,none,0.885,0.878,0.865
Chr11,14952726,SNP_0654,A,G,193,good,False,none,0.685,0.78,0.725
Chr11,15355356,SNP_0655,T,C,363,high_missing,False,none,0.112,0.141,0.111
Chr11,15386915,SNP_0656,C,T,362,low_maf,False,none,0.011,0.019,0.014
Chr11,15506321,SNP_0657,T,G,984,good,False,none,0.921,0.821,0.853
Chr11,15959372,SNP_0658,A,G,591,good,False,none,0.367,0.405,0.355
Chr11,16242313,SNP_0659,C,G,783,good,False,none,0.331,0.247,0.234
Chr11,16379371,SNP_0660,A,T,818,good,False,none,0.592,0.48,0.479
Chr12,271812,SNP_0661,G,A,296,good,False,none,0.484,0.522,0.361
Chr12,483132,SNP_0662,T,G,828,good,False,none,0.712,0.696,0.764
Chr12,685595,SNP_0663,C,G,720,low_maf,False,none,0.013,0.018,0.02
Chr12,715800,SNP_0664,A,G,288,good,False,none,0.324,0.339,0.378
Chr12,814922,SNP_0665,A,C,483,high_missing,False,none,0.504,0.504,0.487
Chr12,1039769,SNP_0666,G,A,527,good,False,none,0.443,0.487,0.193
Chr12,1217060,SNP_0667,T,C,882,low_maf,False,none,0.006,0.007,0.005
Chr12,1538403,SNP_0668,T,A,796,good,False,none,0.754,0.724,0.778
Chr12,2004401,SNP_0669,T,A,950,good,False,none,0.835,0.572,0.762
Chr12,2372432,SNP_0670,G,C,762,good,False,none,0.326,0.311,0.391
Chr12,2980848,SNP_0671,A,G,741,good,False,none,0.647,0.589,0.669
Chr12,3731750,SNP_0672,C,G,276,good,False,none,0.169,0.153,0.175
Chr12,3738946,SNP_0673,C,T,580,good,False,none,0.788,0.516,0.406
Chr12,4217957,SNP_0674,T,G,693,good,False,none,0.185,0.225,0.19
Chr12,4777825,SNP_0675,G,C,430,good,False,none,0.798,0.859,0.809
Chr12,4778965,SNP_0676,A,G,216,good,False,none,0.675,0.672,0.658
Chr12,6245448,SNP_0677,A,T,683,good,False,none,0.189,0.126,0.095
Chr12,6432604,SNP_0678,C,G,433,good,False,none,0.758,0.772,0.658
Chr12,6569509,SNP_0679,C,T,332,good,False,none,0.846,0.83,0.906
Chr12,7108870,SNP_0680,C,G,152,high_missing,False,none,0.384,0.306,0.288
Chr12,7477451,SNP_0681,G,T,354,good,False,none,0.821,0.858,0.95
Chr12,7564585,SNP_0682,A,C,204,low_maf,False,none,0.002,0.001,0.002
Chr12,7777893,SNP_0683,C,A,589,good,False,none,0.757,0.749,0.759
Chr12,7924815,SNP_0684,T,C,739,good,False,none,0.902,0.685,0.726
Chr12,8068858,SNP_0685,G,A,426,good,False,none,0.878,0.95,0.803
Chr12,8181119,SNP_0686,T,G,159,good,False,none,0.429,0.475,0.433
Chr12,8314677,SNP_0687,T,C,489,good,False,none,0.676,0.501,0.509
Chr12,8357081,SNP_0688,T,G,364,good,False,none,0.589,0.758,0.766
Chr12,8499926,SNP_0689,C,G,932,low_maf,False,none,0.01,0.018,0.016
Chr12,8516776,SNP_0690,C,T,508,good,False,none,0.456,0.543,0.306
Chr12,8555744,SNP_0691,C,T,203,good,False,none,0.616,0.622,0.615
Chr12,9252937,SNP_0692,T,G,795,high_missing,False,none,0.662,0.618,0.641
Chr12,9563239,SNP_0693,C,G,985,good,False,none,0.934,0.878,0.877
Chr12,9625986,SNP_0694,A,C,662,good,False,none,0.239,0.23,0.295
Chr12,10675586,SNP_0695,G,T,731,good,False,none,0.338,0.289,0.205
Chr12,11334237,SNP_0696,T,G,844,good,False,none,0.607,0.535,0.596
Chr12,12058358,SNP_0697,C,T,756,good,False,none,0.59,0.625,0.604
Chr12,12143315,SNP_0698,C,T,521,good,False,none,0.874,0.81,0.559
Chr12,12790375,SNP_0699,A,T,703,good,False,none,0.086,0.344,0.114
Chr12,13072325,SNP_0700,A,C,418,good,False,none,0.54,0.539,0.631
Chr12,13149527,SNP_0701,A,G,504,good,False,none,0.596,0.582,0.74
Chr12,13381417,SNP_0702,G,C,324,good,False,none,0.236,0.252,0.191
Chr12,13481242,SNP_0703,T,A,289,good,False,none,0.626,0.465,0.529
Chr12,13495856,SNP_0704,G,C,967,good,False,none,0.8,0.846,0.9
Chr12,13589795,SNP_0705,A,C,547,low_maf,False,none,0.005,0.002,0.005
Chr12,13650615,SNP_0706,C,G,257,good,False,none,0.815,0.826,0.819
Chr12,13715777,SNP_0707,G,A,592,good,False,none,0.715,0.745,0.767
Chr12,13922804,SNP_0708,C,T,983,good,False,none,0.244,0.301,0.27
Chr12,14205353,SNP_0709,T,G,985,good,False,none,0.383,0.441,0.455
Chr12,14378592,SNP_0710,T,G,212,high_missing,False,none,0.291,0.189,0.096
Chr12,14400145,SNP_0711,A,G,571,good,False,none,0.103,0.21,0.195
Chr12,14518827,SNP_0712,A,C,132,good,False,none,0.711,0.562,0.556
Chr12,14713877,SNP_0713,C,T,853,good,False,none,0.673,0.54,0.827
Chr12,15019309,SNP_0714,A,G,500,good,False,none,0.876,0.9,0.823
Chr12,15037504,SNP_0715,G,C,983,good,False,none,0.577,0.453,0.615
Chr12,15112946,SNP_0716,C,G,685,good,False,none,0.716,0.823,0.817
Chr12,15945120,SNP_0717,T,G,391,good,False,none,0.615,0.832,0.879
Chr12,16074314,SNP_0718,G,C,928,good,False,none,0.185,0.229,0.206
Chr12,16146011,SNP_0719,G,A,180,good,False,none,0.733,0.555,0.508
Chr12,16170012,SNP_0720,A,T,981,good,False,none,0.695,0.718,0.619
Chr13,584561,SNP_0721,C,A,893,good,False,none,0.654,0.624,0.642
Chr13,691567,SNP_0722,A,G,803,good,False,none,0.203,0.148,0.109
Chr13,762102,SNP_0723,G,T,207,good,False,none,0.766,0.783,0.7
Chr13,949091,SNP_0724,G,T,198,good,False,none,0.691,0.683,0.645
Chr13,1153875,SNP_0725,T,G,594,good,False,none,0.319,0.411,0.292
Chr13,1356974,SNP_0726,C,G,984,good,False,none,0.319,0.387,0.329
Chr13,1601330,SNP_0727,G,T,542,good,False,none,0.8,0.787,0.817
Chr13,1646580,SNP_0728,T,A,207,good,False,none,0.235,0.226,0.296
Chr13,1762848,SNP_0729,A,T,658,good,False,none,0.604,0.481,0.44
Chr13,2317888,SNP_0730,T,A,839,low_maf,False,none,0.015,0.015,0.02
Chr13,2505230,SNP_0731,T,A,420,good,False,none,0.602,0.613,0.428
Chr13,2568179,SNP_0732,G,T,629,high_missing,False,none,0.411,0.41,0.428
Chr13,2687393,SNP_0733,A,C,195,good,False,none,0.196,0.186,0.158
Chr13,2804993,SNP_0734,C,G,404,good,False,none,0.306,0.224,0.178
Chr13,2817901,SNP_0735,C,T,650,good,False,none,0.534,0.428,0.523
Chr13,3303315,SNP_0736,T,G,255,low_maf,False,none,0.009,0.017,0.013
Chr13,3356489,SNP_0737,G,A,641,good,False,none,0.462,0.47,0.303
Chr13,3519707,SNP_0738,G,C,291,good,False,none,0.755,0.746,0.777
Chr13,4074318,SNP_0739,A,C,393,good,False,none,0.675,0.57,0.462
Chr13,4572256,SNP_0740,A,T,433,high_missing,False,none,0.727,0.547,0.638
Chr13,4696101,SNP_0741,C,G,577,good,False,none,0.212,0.216,0.18
Chr13,4801174,SNP_0742,C,A,566,good,False,none,0.137,0.132,0.079
Chr13,4869384,SNP_0743,G,C,230,good,False,none,0.638,0.62,0.586
Chr13,5063345,SNP_0744,G,A,152,good,False,none,0.615,0.701,0.623
Chr13,5209828,SNP_0745,C,G,463,good,False,none,0.306,0.344,0.324
Chr13,5831261,SNP_0746,T,C,941,good,False,none,0.292,0.317,0.267
Chr13,5841906,SNP_0747,A,C,569,good,False,none,0.452,0.524,0.423
Chr13,6406890,SNP_0748,G,A,255,good,False,none,0.135,0.158,0.151
Chr13,6832995,SNP_0749,C,G,451,low_maf,False,none,0.018,0.01,0.018
Chr13,6913794,SNP_0750,T,C,172,high_missing,False,none,0.363,0.281,0.401
Chr13,7550751,SNP_0751,T,C,624,good,False,none,0.95,0.7,0.795
Chr13,8239085,SNP_0752,C,G,476,good,False,none,0.129,0.212,0.167
Chr13,8456382,SNP_0753,A,C,371,good,False,none,0.387,0.433,0.48
Chr13,8932010,SNP_0754,C,G,224,good,False,none,0.371,0.369,0.372
Chr13,9108450,SNP_0755,T,A,678,low_maf,False,none,0.011,0.016,0.014
Chr13,9333841,SNP_0756,G,T,730,good,False,none,0.735,0.745,0.732
Chr13,9486558,SNP_0757,C,A,470,good,False,none,0.839,0.81,0.874
Chr13,9667242,SNP_0758,C,G,805,good,False,none,0.374,0.384,0.343
Chr13,9850773,SNP_0759,C,G,270,good,False,none,0.368,0.583,0.493
Chr13,10126538,SNP_0760,C,A,310,good,False,none,0.814,0.838,0.817
Chr13,10408187,SNP_0761,T,C,971,low_maf,False,none,0.016,0.017,0.018
Chr13,10828480,SNP_0762,C,A,408,good,False,none,0.822,0.95,0.778
Chr13,11053957,SNP_0763,T,C,710,good,False,none,0.758,0.805,0.742
Chr13,11164885,SNP_0764,C,T,686,good,False,none,0.525,0.394,0.501
Chr13,11327835,SNP_0765,G,T,536,good,False,none,0.588,0.648,0.637
Chr13,11846320,SNP_0766,A,G,532,good,False,none,0.251,0.282,0.209
Chr13,12145766,SNP_0767,G,C,246,good,False,none,0.345,0.312,0.382
Chr13,12808471,SNP_0768,T,C,299,good,False,none,0.333,0.271,0.249
Chr13,12886359,SNP_0769,C,G,791,good,False,none,0.313,0.339,0.579
Chr13,12983059,SNP_0770,G,C,301,good,False,none,0.152,0.141,0.149
Chr13,13085395,SNP_0771,T,A,393,good,False,none,0.185,0.341,0.269
Chr13,13185723,SNP_0772,G,T,967,good,False,none,0.278,0.05,0.065
Chr13,13556436,SNP_0773,T,G,883,high_missing,False,none,0.95,0.709,0.84
Chr13,13899008,SNP_0774,T,G,748,good,False,none,0.385,0.469,0.476
Chr13,14521388,SNP_0775,T,A,456,high_missing,False,none,0.683,0.706,0.708
Chr13,14611107,SNP_0776,C,A,903,good,False,none,0.299,0.321,0.297
Chr13,14746127,SNP_0777,C,T,705,good,False,none,0.848,0.896,0.858
Chr13,14901623,SNP_0778,C,A,770,good,False,none,0.339,0.116,0.096
Chr13,15027215,SNP_0779,A,G,664,good,False,none,0.245,0.13,0.266
Chr13,15339883,SNP_0780,A,G,604,good,False,none,0.321,0.361,0.362
Chr14,19912,SNP_0781,G,A,165,good,False,none,0.701,0.578,0.703
Chr14,51818,SNP_0782,A,T,699,good,False,none,0.451,0.376,0.434
Chr14,52383,SNP_0783,C,T,348,good,False,none,0.622,0.576,0.599
Chr14,1111839,SNP_0784,G,A,850,good,False,none,0.345,0.285,0.305
Chr14,1217274,SNP_0785,C,G,979,good,False,none,0.602,0.602,0.737
Chr14,1537390,SNP_0786,C,A,220,good,False,none,0.529,0.351,0.622
Chr14,1950978,SNP_0787,T,A,856,good,False,none,0.57,0.742,0.736
Chr14,2178007,SNP_0788,T,A,860,good,False,none,0.476,0.47,0.362
Chr14,2300306,SNP_0789,T,G,476,good,False,none,0.589,0.545,0.448
Chr14,2842649,SNP_0790,C,T,456,good,False,none,0.273,0.228,0.163
Chr14,3119848,SNP_0791,C,G,775,good,False,none,0.175,0.241,0.238
Chr14,3357911,SNP_0792,C,A,225,good,False,none,0.838,0.799,0.822
Chr14,3425123,SNP_0793,C,G,502,good,False,none,0.824,0.829,0.817
Chr14,3551022,SNP_0794,C,T,140,good,False,none,0.139,0.365,0.155
Chr14,4453134,SNP_0795,G,A,933,good,False,none,0.363,0.433,0.448
Chr14,4505977,SNP_0796,G,A,241,good,False,none,0.415,0.438,0.356
Chr14,5401465,SNP_0797,T,A,422,good,False,none,0.561,0.597,0.371
Chr14,5602059,SNP_0798,C,A,105,good,False,none,0.715,0.775,0.669
Chr14,5779738,SNP_0799,A,T,605,good,False,none,0.279,0.113,0.085
Chr14,6118433,SNP_0800,C,T,151,good,False,none,0.866,0.878,0.824
Chr14,6167513,SNP_0801,C,A,375,good,False,none,0.678,0.76,0.816
Chr14,6204253,SNP_0802,A,C,715,good,False,none,0.154,0.121,0.113
Chr14,6214004,SNP_0803,C,A,471,high_missing,False,none,0.532,0.579,0.771
Chr14,6504741,SNP_0804,A,C,352,high_missing,False,none,0.158,0.162,0.152
Chr14,6684122,SNP_0805,A,T,452,good,False,none,0.203,0.304,0.329
Chr14,6859417,SNP_0806,C,G,410,good,False,none,0.731,0.734,0.71
Chr14,7111871,SNP_0807,C,G,103,good,False,none,0.225,0.323,0.089
Chr14,7532929,SNP_0808,C,T,866,good,False,none,0.781,0.717,0.747
Chr14,7592714,SNP_0809,A,C,689,good,False,none,0.648,0.765,0.675
Chr14,7748626,SNP_0810,G,T,605,low_maf,False,none,0.013,0.013,0.013
Chr14,7867779,SNP_0811,T,C,455,high_missing,False,none,0.95,0.687,0.905
Chr14,7984391,SNP_0812,T,G,753,low_maf,False,none,0.009,0.003,0.006
Chr14,8509894,SNP_0813,T,C,225,good,False,none,0.796,0.778,0.806
Chr14,8518714,SNP_0814,T,A,604,good,False,none,0.548,0.532,0.53
Chr14,8612530,SNP_0815,T,A,436,good,False,none,0.871,0.897,0.898
Chr14,8633233,SNP_0816,G,T,719,good,False,none,0.671,0.864,0.744
Chr14,8876842,SNP_0817,A,T,744,low_maf,False,none,0.02,0.016,0.023
Chr14,8987951,SNP_0818,T,G,753,good,False,none,0.346,0.343,0.35
Chr14,9128446,SNP_0819,C,T,265,good,False,none,0.95,0.78,0.784
Chr14,9244133,SNP_0820,A,C,116,good,False,none,0.736,0.682,0.465
Chr14,9615439,SNP_0821,C,T,566,good,False,none,0.783,0.756,0.813
Chr14,9670549,SNP_0822,C,A,369,good,False,none,0.75,0.767,0.763
Chr14,9717066,SNP_0823,C,G,296,good,False,none,0.326,0.215,0.265
Chr14,10447645,SNP_0824,C,G,916,high_missing,False,none,0.625,0.64,0.636
Chr14,10777769,SNP_0825,G,A,944,high_missing,False,none,0.748,0.727,0.722
Chr14,10872767,SNP_0826,T,G,372,good,False,none,0.252,0.117,0.206
Chr14,11035845,SNP_0827,G,T,829,good,False,none,0.577,0.576,0.56
Chr14,11121837,SNP_0828,C,T,300,good,False,none,0.706,0.851,0.694
Chr14,11546187,SNP_0829,C,G,997,good,False,none,0.895,0.892,0.906
Chr14,11637738,SNP_0830,A,T,360,good,False,none,0.65,0.292,0.361
Chr14,11912317,SNP_0831,G,A,103,good,False,none,0.244,0.263,0.259
Chr14,12530842,SNP_0832,C,G,786,good,False,none,0.436,0.492,0.36
Chr14,12920437,SNP_0833,A,G,321,good,False,none,0.394,0.563,0.343
Chr14,13160410,SNP_0834,A,T,571,good,False,none,0.902,0.888,0.891
Chr14,13697752,SNP_0835,A,T,928,good,False,none,0.615,0.576,0.613
Chr14,13738449,SNP_0836,G,C,555,good,False,none,0.417,0.539,0.719
Chr14,14529431,SNP_0837,T,A,417,good,False,none,0.881,0.688,0.907
Chr14,15042734,SNP_0838,G,C,848,good,False,none,0.483,0.504,0.502
Chr14,15215833,SNP_0839,C,T,445,low_maf,False,none,0.003,0.001,0.001
Chr14,15369491,SNP_0840,A,C,309,good,False,none,0.206,0.332,0.436
Chr15,118863,SNP_0841,G,A,183,good,False,none,0.893,0.855,0.865
Chr15,345305,SNP_0842,A,C,815,good,False,none,0.498,0.486,0.791
Chr15,489447,SNP_0843,T,G,696,good,False,none,0.469,0.442,0.56
Chr15,725257,SNP_0844,C,T,536,low_maf,False,none,0.012,0.01,0.011
Chr15,849120,SNP_0845,T,G,400,good,False,none,0.199,0.165,0.204
Chr15,1831842,SNP_0846,G,C,885,good,False,none,0.369,0.408,0.377
Chr15,1859590,SNP_0847,A,T,649,good,False,none,0.061,0.138,0.298
Chr15,2176282,SNP_0848,A,C,251,good,False,none,0.78,0.638,0.662
Chr15,2423234,SNP_0849,C,G,181,good,False,none,0.342,0.312,0.18
Chr15,2443620,SNP_0850,C,T,907,good,False,none,0.804,0.693,0.792
Chr15,2532354,SNP_0851,T,G,729,good,False,none,0.245,0.309,0.05
Chr15,3062151,SNP_0852,T,A,385,good,False,none,0.234,0.25,0.278
Chr15,3522374,SNP_0853,G,C,277,high_missing,False,none,0.147,0.129,0.207
Chr15,3534682,SNP_0854,A,C,440,good,False,none,0.227,0.345,0.3
Chr15,3867653,SNP_0855,T,G,363,low_maf,False,none,0.018,0.014,0.017
Chr15,4062661,SNP_0856,A,G,894,good,False,none,0.594,0.643,0.619
Chr15,4506003,SNP_0857,T,C,104,good,False,none,0.455,0.431,0.418
Chr15,4627801,SNP_0858,C,T,655,good,False,none,0.824,0.785,0.878
Chr15,4839601,SNP_0859,G,A,946,good,False,none,0.604,0.56,0.494
Chr15,5058278,SNP_0860,A,C,274,good,False,none,0.866,0.612,0.636
Chr15,5131717,SNP_0861,C,A,650,good,False,none,0.632,0.544,0.674
Chr15,5593068,SNP_0862,A,C,118,good,False,none,0.334,0.294,0.394
Chr15,6519442,SNP_0863,G,T,218,low_maf,False,none,0.008,0.008,0.018
Chr15,6622966,SNP_0864,T,G,917,good,False,none,0.363,0.421,0.341
Chr15,6623154,SNP_0865,C,T,276,good,False,none,0.823,0.791,0.72
Chr15,6831201,SNP_0866,G,T,262,low_maf,False,none,0.002,0.011,0.009
Chr15,7049533,SNP_0867,A,C,795,good,False,none,0.95,0.69,0.648
Chr15,7155119,SNP_0868,C,A,383,good,False,none,0.267,0.244,0.257
Chr15,7713437,SNP_0869,A,T,234,good,False,none,0.705,0.718,0.769
Chr15,7796500,SNP_0870,G,C,778,high_missing,False,none,0.553,0.571,0.535
Chr15,8252324,SNP_0871,G,A,462,low_maf,False,none,0.014,0.008,0.009
Chr15,8312700,SNP_0872,A,C,743,low_maf,False,none,0.017,0.013,0.022
Chr15,8916368,SNP_0873,T,A,851,high_missing,False,none,0.629,0.477,0.616
Chr15,9203874,SNP_0874,C,A,215,good,False,none,0.344,0.322,0.309
Chr15,9216782,SNP_0875,A,G,300,good,False,none,0.188,0.083,0.271
Chr15,9245573,SNP_0876,T,A,350,good,False,none,0.497,0.562,0.524
Chr15,10213830,SNP_0877,T,G,760,good,False,none,0.161,0.23,0.266
Chr15,10214484,SNP_0878,A,G,169,good,False,none,0.619,0.95,0.676
Chr15,10477136,SNP_0879,A,C,338,high_missing,False,none,0.281,0.268,0.237
Chr15,10492200,SNP_0880,G,T,207,good,False,none,0.777,0.95,0.812
Chr15,10497089,SNP_0881,A,T,858,good,False,none,0.626,0.688,0.625
Chr15,10668707,SNP_0882,A,T,775,good,False,none,0.83,0.839,0.792
Chr15,10748285,SNP_0883,A,G,788,good,False,none,0.74,0.851,0.88
Chr15,10870494,SNP_0884,C,T,347,good,False,none,0.678,0.728,0.728
Chr15,11213696,SNP_0885,T,C,611,low_maf,False,none,0.019,0.016,0.016
Chr15,11217581,SNP_0886,G,C,975,high_missing,False,none,0.277,0.259,0.342
Chr15,11647422,SNP_0887,A,T,106,good,False,none,0.102,0.196,0.188
Chr15,11883361,SNP_0888,G,A,528,good,False,none,0.419,0.352,0.339
Chr15,12942958,SNP_0889,T,C,640,good,False,none,0.26,0.173,0.23
Chr15,12949271,SNP_0890,G,A,727,good,False,none,0.691,0.831,0.784
Chr15,13297976,SNP_0891,C,T,326,good,False,none,0.779,0.854,0.84
Chr15,13671564,SNP_0892,G,A,830,low_maf,False,none,0.01,0.014,0.016
Chr15,13821650,SNP_0893,C,G,745,good,False,none,0.737,0.632,0.688
Chr15,13882602,SNP_0894,G,C,847,low_maf,False,none,0.005,0.001,0.005
Chr15,14061579,SNP_0895,C,A,249,good,False,none,0.259,0.12,0.051
Chr15,14268684,SNP_0896,C,A,883,good,False,none,0.532,0.501,0.459
Chr15,14294361,SNP_0897,C,A,625,good,False,none,0.893,0.913,0.883
Chr15,14711487,SNP_0898,A,T,553,good,False,none,0.752,0.535,0.628
Chr15,15191484,SNP_0899,C,A,645,good,False,none,0.451,0.448,0.445
Chr15,15295448,SNP_0900,A,C,755,good,False,none,0.227,0.187,0.192
Chr16,87417,SNP_0901,C,G,495,good,False,none,0.748,0.734,0.726
Chr16,357746,SNP_0902,C,G,669,good,False,none,0.551,0.447,0.388
Chr16,630995,SNP_0903,A,T,201,good,False,none,0.437,0.489,0.68
Chr16,1361290,SNP_0904,T,C,623,high_missing,False,none,0.101,0.152,0.08
Chr16,1416758,SNP_0905,T,C,975,good,False,none,0.841,0.857,0.827
Chr16,1680489,SNP_0906,G,C,799,good,False,none,0.555,0.544,0.502
Chr16,2135491,SNP_0907,C,T,119,good,False,none,0.688,0.648,0.656
Chr16,2484345,SNP_0908,G,C,506,high_missing,False,none,0.526,0.775,0.714
Chr16,2743533,SNP_0909,G,A,585,good,False,none,0.884,0.731,0.895
Chr16,2785314,SNP_0910,T,C,166,good,False,none,0.436,0.451,0.451
Chr16,2818349,SNP_0911,C,A,213,low_maf,False,none,0.012,0.011,0.012
Chr16,2819538,SNP_0912,T,A,593,good,False,none,0.05,0.218,0.197
Chr16,3141527,SNP_0913,A,T,815,good,False,none,0.215,0.236,0.212
Chr16,3428593,SNP_0914,G,A,379,good,False,none,0.18,0.168,0.11
Chr16,3466766,SNP_0915,A,T,622,good,False,none,0.585,0.852,0.95
Chr16,4149971,SNP_0916,G,T,301,good,False,none,0.483,0.313,0.452
Chr16,4420417,SNP_0917,G,A,950,good,False,none,0.392,0.553,0.433
Chr16,4566919,SNP_0918,G,T,796,good,False,none,0.72,0.783,0.779
Chr16,4616005,SNP_0919,C,A,588,good,False,none,0.836,0.759,0.677
Chr16,4972362,SNP_0920,T,A,773,good,False,none,0.234,0.326,0.114
Chr16,5019980,SNP_0921,C,T,216,high_missing,False,none,0.449,0.35,0.342
Chr16,5434617,SNP_0922,A,G,710,good,False,none,0.605,0.602,0.655
Chr16,5787269,SNP_0923,C,G,413,good,False,none,0.114,0.079,0.223
Chr16,6005459,SNP_0924,G,C,550,good,False,none,0.561,0.469,0.681
Chr16,6011247,SNP_0925,G,A,384,good,False,none,0.929,0.857,0.734
Chr16,6040887,SNP_0926,A,G,583,good,False,none,0.26,0.374,0.657
Chr16,6054805,SNP_0927,C,G,561,good,False,none,0.845,0.842,0.828
Chr16,6207689,SNP_0928,T,A,410,good,False,none,0.635,0.483,0.527
Chr16,6478878,SNP_0929,A,T,532,high_missing,False,none,0.668,0.551,0.783
Chr16,6662772,SNP_0930,C,G,424,low_maf,False,none,0.011,0.009,0.015
Chr16,6846501,SNP_0931,G,C,609,good,False,none,0.327,0.377,0.483
Chr16,6952024,SNP_0932,C,T,990,good,False,none,0.34,0.328,0.297
Chr16,7005973,SNP_0933,C,A,508,good,False,none,0.95,0.784,0.875
Chr16,7356256,SNP_0934,T,C,961,good,False,none,0.487,0.492,0.437
Chr16,7938244,SNP_0935,T,G,151,good,False,none,0.738,0.623,0.733
Chr16,8629691,SNP_0936,T,A,257,good,False,none,0.72,0.646,0.641
Chr16,9000157,SNP_0937,A,T,470,good,False,none,0.271,0.131,0.05
Chr16,9359643,SNP_0938,C,T,408,good,False,none,0.746,0.742,0.732
Chr16,9661323,SNP_0939,T,G,795,good,False,none,0.851,0.734,0.765
Chr16,10147695,SNP_0940,G,A,847,good,False,none,0.242,0.202,0.347
Chr16,10547760,SNP_0941,A,C,951,good,False,none,0.619,0.71,0.538
Chr16,11009015,SNP_0942,C,A,964,high_missing,False,none,0.737,0.742,0.733
Chr16,11316682,SNP_0943,C,G,784,good,False,none,0.743,0.695,0.705
Chr16,11383660,SNP_0944,C,T,959,good,False,none,0.49,0.549,0.405
Chr16,11658695,SNP_0945,C,A,532,good,False,none,0.407,0.414,0.407
Chr16,11722045,SNP_0946,A,G,826,good,False,none,0.601,0.617,0.487
Chr16,11726619,SNP_0947,A,C,625,good,False,none,0.267,0.289,0.311
Chr16,11878429,SNP_0948,C,A,913,good,False,none,0.67,0.507,0.55
Chr16,12055015,SNP_0949,T,C,298,good,False,none,0.765,0.716,0.751
Chr16,12690673,SNP_0950,T,G,212,good,False,none,0.334,0.196,0.134
Chr16,12808116,SNP_0951,G,T,408,low_maf,False,none,0.016,0.014,0.018
Chr16,13107281,SNP_0952,A,T,641,good,False,none,0.339,0.279,0.374
Chr16,13152476,SNP_0953,A,C,336,low_maf,False,none,0.019,0.014,0.018
Chr16,13221944,SNP_0954,C,G,186,good,False,none,0.273,0.282,0.298
Chr16,13349753,SNP_0955,G,T,185,good,False,none,0.489,0.49,0.541
Chr16,13481908,SNP_0956,G,A,215,good,False,none,0.833,0.763,0.95
Chr16,13928920,SNP_0957,A,G,360,good,False,none,0.461,0.509,0.479
Chr16,14173681,SNP_0958,A,T,590,good,False,none,0.288,0.391,0.377
Chr16,14192896,SNP_0959,A,T,509,good,False,none,0.838,0.925,0.852
Chr16,14193987,SNP_0960,A,G,515,good,False,none,0.156,0.077,0.101
Chr17,77508,SNP_0961,T,A,519,good,False,none,0.548,0.488,0.447
Chr17,350544,SNP_0962,A,T,135,good,False,none,0.37,0.366,0.336
Chr17,388290,SNP_0963,A,G,983,good,False,none,0.453,0.498,0.66
Chr17,516890,SNP_0964,G,T,209,good,False,none,0.235,0.237,0.143
Chr17,528990,SNP_0965,A,T,683,good,False,none,0.247,0.191,0.201
Chr17,772315,SNP_0966,T,G,623,good,False,none,0.319,0.495,0.294
Chr17,785170,SNP_0967,T,A,606,good,False,none,0.85,0.845,0.803
Chr17,909739,SNP_0968,A,T,397,good,False,none,0.137,0.197,0.169
Chr17,928172,SNP_0969,C,A,663,good,False,none,0.621,0.551,0.48
Chr17,1240509,SNP_0970,T,A,458,good,False,none,0.132,0.142,0.158
Chr17,1392902,SNP_0971,G,C,147,good,False,none,0.467,0.456,0.295
Chr17,1484821,SNP_0972,T,A,487,good,False,none,0.091,0.319,0.294
Chr17,2088076,SNP_0973,T,A,316,good,False,none,0.642,0.654,0.644
Chr17,2231938,SNP_0974,A,C,717,good,False,none,0.458,0.448,0.343
Chr17,2492656,SNP_0975,A,C,698,good,False,none,0.489,0.42,0.32
Chr17,2806210,SNP_0976,C,T,650,good,False,none,0.74,0.635,0.425
Chr17,2904793,SNP_0977,T,A,835,good,False,none,0.792,0.754,0.92
Chr17,3524658,SNP_0978,G,C,875,good,False,none,0.357,0.431,0.502
Chr17,3684978,SNP_0979,G,A,184,good,False,none,0.18,0.175,0.177
Chr17,3710999,SNP_0980,G,A,429,good,False,none,0.363,0.423,0.545
Chr17,3900241,SNP_0981,G,C,963,good,False,none,0.838,0.808,0.928
Chr17,4314396,SNP_0982,C,A,940,good,False,none,0.695,0.779,0.689
Chr17,4557840,SNP_0983,G,C,837,good,False,none,0.933,0.879,0.838
Chr17,4664546,SNP_0984,C,G,787,good,False,none,0.229,0.147,0.249
Chr17,4852040,SNP_0985,G,A,716,good,False,none,0.152,0.149,0.13
Chr17,5373111,SNP_0986,C,A,721,good,False,none,0.791,0.752,0.83
Chr17,5553719,SNP_0987,C,T,756,good,False,none,0.3,0.188,0.18
Chr17,5902834,SNP_0988,A,C,133,good,False,none,0.918,0.941,0.81
Chr17,5947798,SNP_0989,G,C,774,high_missing,False,none,0.218,0.22,0.05
Chr17,5959661,SNP_0990,C,A,983,good,False,none,0.527,0.591,0.626
Chr17,6098321,SNP_0991,T,C,561,good,False,none,0.433,0.454,0.412
Chr17,6419839,SNP_0992,A,C,101,good,False,none,0.824,0.862,0.798
Chr17,6680424,SNP_0993,G,T,863,good,False,none,0.509,0.35,0.421
Chr17,6789868,SNP_0994,G,T,476,low_maf,False,none,0.016,0.014,0.016
Chr17,6917840,SNP_0995,T,A,504,low_maf,False,none,0.017,0.019,0.019
Chr17,7076433,SNP_0996,G,A,795,low_maf,False,none,0.004,0.007,0.001
Chr17,7429420,SNP_0997,G,T,754,good,False,none,0.165,0.246,0.222
Chr17,8252814,SNP_0998,A,T,648,good,False,none,0.218,0.319,0.298
Chr17,8480448,SNP_0999,T,G,442,good,False,none,0.333,0.355,0.338
Chr17,9074433,SNP_1000,A,T,857,high_missing,False,none,0.491,0.682,0.481
Chr17,9461747,SNP_1001,C,T,675,high_missing,False,none,0.275,0.05,0.411
Chr17,9511753,SNP_1002,T,A,888,good,False,none,0.221,0.275,0.422
Chr17,9764240,SNP_1003,T,G,646,good,False,none,0.217,0.482,0.248
Chr17,9800547,SNP_1004,A,C,940,good,False,none,0.324,0.275,0.239
Chr17,10445839,SNP_1005,T,G,392,good,False,none,0.47,0.48,0.44
Chr17,10619585,SNP_1006,A,T,568,good,False,none,0.303,0.269,0.221
Chr17,10805384,SNP_1007,G,A,208,good,False,none,0.522,0.521,0.531
Chr17,10922452,SNP_1008,T,A,267,good,False,none,0.242,0.373,0.05
Chr17,11459129,SNP_1009,A,C,116,low_maf,False,none,0.023,0.023,0.017
Chr17,11564440,SNP_1010,G,C,274,good,False,none,0.86,0.95,0.871
Chr17,12517398,SNP_1011,A,T,534,good,False,none,0.825,0.938,0.784
Chr17,12629335,SNP_1012,T,A,227,good,False,none,0.527,0.463,0.531
Chr17,12738618,SNP_1013,C,G,414,good,False,none,0.604,0.537,0.631
Chr17,12959247,SNP_1014,G,T,356,good,False,none,0.652,0.69,0.705
Chr17,13413610,SNP_1015,A,C,478,good,False,none,0.844,0.787,0.74
Chr17,13516058,SNP_1016,A,T,356,good,False,none,0.201,0.175,0.16
Chr17,13674231,SNP_1017,A,C,839,good,False,none,0.916,0.95,0.806
Chr17,14226430,SNP_1018,C,T,294,low_maf,False,none,0.016,0.016,0.014
Chr17,14526393,SNP_1019,G,A,159,high_missing,False,none,0.838,0.836,0.833
Chr17,14657115,SNP_1020,A,C,399,good,False,none,0.283,0.294,0.308
Chr18,83947,SNP_1021,G,T,870,high_missing,False,none,0.296,0.319,0.287
Chr18,306797,SNP_1022,A,C,912,good,False,none,0.518,0.38,0.417
Chr18,601311,SNP_1023,G,A,492,good,False,none,0.416,0.523,0.47
Chr18,1130351,SNP_1024,C,G,189,good,False,none,0.756,0.759,0.72
Chr18,1264530,SNP_1025,G,A,378,good,False,none,0.3,0.263,0.302
Chr18,1645381,SNP_1026,T,G,791,good,False,none,0.9,0.879,0.888
Chr18,2043061,SNP_1027,T,C,612,good,False,none,0.679,0.71,0.678
Chr18,2439954,SNP_1028,C,A,242,low_maf,False,none,0.013,0.013,0.022
Chr18,2573569,SNP_1029,C,A,132,good,False,none,0.267,0.223,0.242
Chr18,3043303,SNP_1030,T,C,562,good,False,none,0.686,0.562,0.582
Chr18,3305218,SNP_1031,C,A,164,good,False,none,0.422,0.422,0.418
Chr18,3363108,SNP_1032,G,A,428,good,False,none,0.901,0.933,0.803
Chr18,4160419,SNP_1033,C,T,389,good,False,none,0.368,0.369,0.369
Chr18,4298577,SNP_1034,G,A,164,good,False,none,0.42,0.569,0.422
Chr18,4585028,SNP_1035,G,T,213,good,False,none,0.409,0.413,0.381
Chr18,4630622,SNP_1036,C,G,512,low_maf,False,none,0.02,0.019,0.016
Chr18,4793688,SNP_1037,A,T,188,good,False,none,0.318,0.343,0.288
Chr18,4798899,SNP_1038,A,T,460,good,False,none,0.193,0.189,0.218
Chr18,5092410,SNP_1039,T,G,679,low_maf,False,none,0.005,0.013,0.015
Chr18,5251666,SNP_1040,T,C,978,good,False,none,0.394,0.264,0.6
Chr18,5278702,SNP_1041,G,C,315,good,False,none,0.872,0.834,0.896
Chr18,5831001,SNP_1042,T,G,306,good,False,none,0.119,0.163,0.085
Chr18,6533059,SNP_1043,C,G,681,good,False,none,0.703,0.699,0.755
Chr18,6695763,SNP_1044,T,G,258,good,False,none,0.47,0.553,0.499
Chr18,6793021,SNP_1045,G,T,810,good,False,none,0.213,0.252,0.268
Chr18,6860700,SNP_1046,A,T,682,good,False,none,0.178,0.286,0.345
Chr18,7397204,SNP_1047,C,A,805,good,False,none,0.154,0.345,0.143
Chr18,7529281,SNP_1048,T,G,886,good,False,none,0.632,0.662,0.667
Chr18,8109748,SNP_1049,C,T,412,good,False,none,0.285,0.219,0.135
Chr18,8176344,SNP_1050,G,C,474,good,False,none,0.577,0.618,0.526
Chr18,8332392,SNP_1051,T,C,427,good,False,none,0.636,0.56,0.554
Chr18,8681848,SNP_1052,C,T,260,good,False,none,0.798,0.786,0.849
Chr18,8736190,SNP_1053,C,T,275,good,False,none,0.746,0.463,0.629
Chr18,8832763,SNP_1054,C,A,270,good,False,none,0.505,0.457,0.49
Chr18,9612645,SNP_1055,T,C,709,good,False,none,0.934,0.609,0.723
Chr18,9708189,SNP_1056,C,G,734,good,False,none,0.343,0.35,0.421
Chr18,10309574,SNP_1057,A,T,556,good,False,none,0.675,0.722,0.717
Chr18,10396698,SNP_1058,A,T,963,high_missing,False,none,0.157,0.172,0.174
Chr18,10463676,SNP_1059,A,C,473,good,False,none,0.371,0.359,0.333
Chr18,11025873,SNP_1060,T,C,316,good,False,none,0.7,0.55,0.585
Chr18,11026352,SNP_1061,A,C,490,good,False,none,0.58,0.745,0.654
Chr18,11195358,SNP_1062,T,A,120,good,False,none,0.423,0.449,0.653
Chr18,11406254,SNP_1063,G,C,415,good,False,none,0.65,0.659,0.648
Chr18,11636424,SNP_1064,C,G,857,low_maf,False,none,0.017,0.017,0.013
Chr18,11947863,SNP_1065,T,C,136,good,False,none,0.77,0.851,0.774
Chr18,11954913,SNP_1066,T,G,746,good,False,none,0.313,0.305,0.285
Chr18,12305129,SNP_1067,C,T,539,good,False,none,0.604,0.643,0.525
Chr18,12760708,SNP_1068,A,C,220,good,False,none,0.163,0.189,0.205
Chr18,12842577,SNP_1069,T,G,927,good,False,none,0.465,0.561,0.536
Chr18,12904939,SNP_1070,C,G,393,high_missing,False,none,0.5,0.554,0.572
Chr18,12959710,SNP_1071,C,A,255,good,False,none,0.649,0.617,0.619
Chr18,13201780,SNP_1072,G,T,976,low_maf,False,none,0.012,0.013,0.01
Chr18,13276312,SNP_1073,T,C,803,low_maf,False,none,0.015,0.011,0.017
Chr18,13427677,SNP_1074,G,C,288,good,False,none,0.59,0.661,0.348
Chr18,13523454,SNP_1075,G,T,396,good,False,none,0.915,0.864,0.809
Chr18,13705712,SNP_1076,T,A,534,good,False,none,0.39,0.416,0.421
Chr18,13887893,SNP_1077,C,G,122,good,False,none,0.591,0.659,0.697
Chr18,14045207,SNP_1078,T,C,380,good,False,none,0.866,0.705,0.853
Chr18,14209973,SNP_1079,G,T,887,good,False,none,0.607,0.553,0.602
Chr18,14388011,SNP_1080,T,A,591,high_missing,False,none,0.448,0.38,0.445
Chr19,227467,SNP_1081,G,C,256,good,False,none,0.754,0.744,0.753
Chr19,636220,SNP_1082,A,T,878,good,False,none,0.54,0.593,0.612
Chr19,1029976,SNP_1083,C,T,700,high_missing,False,none,0.579,0.552,0.592
Chr19,1531212,SNP_1084,C,A,956,good,False,none,0.604,0.676,0.584
Chr19,1549474,SNP_1085,A,G,302,good,False,none,0.685,0.755,0.776
Chr19,1569617,SNP_1086,T,A,423,good,False,none,0.307,0.185,0.225
Chr19,2200600,SNP_1087,C,T,367,good,False,none,0.346,0.36,0.178
Chr19,2387037,SNP_1088,G,C,354,good,False,none,0.304,0.166,0.165
Chr19,2471255,SNP_1089,T,G,894,good,False,none,0.439,0.408,0.332
Chr19,2612582,SNP_1090,T,G,234,good,False,none,0.598,0.626,0.606
Chr19,2707881,SNP_1091,A,G,830,low_maf,False,none,0.001,0.005,0.001
Chr19,2913138,SNP_1092,G,C,927,high_missing,False,none,0.413,0.495,0.4
Chr19,3050947,SNP_1093,T,G,760,good,False,none,0.078,0.24,0.196
Chr19,3407197,SNP_1094,C,G,557,good,False,none,0.407,0.379,0.345
Chr19,3415886,SNP_1095,C,G,299,good,False,none,0.95,0.835,0.841
Chr19,3726746,SNP_1096,T,G,255,good,False,none,0.177,0.144,0.114
Chr19,3848983,SNP_1097,T,A,283,good,False,none,0.22,0.222,0.282
Chr19,3991555,SNP_1098,A,T,692,good,False,none,0.302,0.076,0.214
Chr19,4282693,SNP_1099,C,G,919,good,False,none,0.667,0.787,0.669
Chr19,4319973,SNP_1100,T,A,332,low_maf,False,none,0.001,0.004,0.006
Chr19,4404126,SNP_1101,A,G,233,good,False,none,0.874,0.704,0.753
Chr19,4706294,SNP_1102,T,G,329,good,False,none,0.454,0.494,0.479
Chr19,5042296,SNP_1103,G,T,807,high_missing,False,none,0.431,0.433,0.439
Chr19,5060136,SNP_1104,G,A,358,good,False,none,0.403,0.447,0.459
Chr19,5101768,SNP_1105,C,T,406,good,False,none,0.425,0.401,0.301
Chr19,5649721,SNP_1106,C,G,842,good,False,none,0.253,0.246,0.233
Chr19,5812182,SNP_1107,A,G,502,good,False,none,0.199,0.309,0.292
Chr19,5852175,SNP_1108,T,C,888,good,False,none,0.28,0.217,0.206
Chr19,6265538,SNP_1109,G,A,328,good,False,none,0.561,0.434,0.564
Chr19,6524831,SNP_1110,G,T,963,good,False,none,0.272,0.313,0.206
Chr19,6601453,SNP_1111,T,A,995,good,False,none,0.39,0.204,0.512
Chr19,7112847,SNP_1112,C,A,594,good,False,none,0.435,0.43,0.483
Chr19,7396178,SNP_1113,T,A,198,good,False,none,0.382,0.541,0.409
Chr19,7763549,SNP_1114,C,G,335,good,False,none,0.477,0.522,0.522
Chr19,7778817,SNP_1115,A,G,284,good,False,none,0.339,0.354,0.308
Chr19,7997111,SNP_1116,T,A,160,low_maf,False,none,0.018,0.009,0.017
Chr19,8027712,SNP_1117,T,C,621,good,False,none,0.735,0.774,0.708
Chr19,8633394,SNP_1118,C,G,211,good,False,none,0.165,0.218,0.219
Chr19,8839198,SNP_1119,A,T,800,good,False,none,0.245,0.123,0.062
Chr19,8935359,SNP_1120,T,A,671,good,False,none,0.49,0.609,0.575
Chr19,9638724,SNP_1121,C,A,641,high_missing,False,none,0.443,0.466,0.497
Chr19,9707051,SNP_1122,C,G,494,low_maf,False,none,0.002,0.001,0.001
Chr19,10248268,SNP_1123,A,T,633,good,False,none,0.855,0.769,0.94
Chr19,10471654,SNP_1124,C,T,488,good,False,none,0.05,0.217,0.142
Chr19,10978573,SNP_1125,C,T,960,good,False,none,0.512,0.379,0.615
Chr19,11141920,SNP_1126,A,T,807,good,False,none,0.495,0.7,0.415
Chr19,11204271,SNP_1127,C,A,970,good,False,none,0.756,0.761,0.765
Chr19,11411369,SNP_1128,G,T,362,good,False,none,0.508,0.675,0.724
Chr19,11830350,SNP_1129,T,A,360,good,False,none,0.501,0.507,0.481
Chr19,11949005,SNP_1130,T,A,473,good,False,none,0.374,0.428,0.553
Chr19,12170887,SNP_1131,A,G,152,good,False,none,0.381,0.495,0.396
Chr19,12238025,SNP_1132,G,A,110,good,False,none,0.874,0.804,0.823
Chr19,12484501,SNP_1133,A,T,409,good,False,none,0.828,0.849,0.575
Chr19,12726502,SNP_1134,T,G,408,good,False,none,0.841,0.569,0.729
Chr19,13006412,SNP_1135,C,T,270,good,False,none,0.522,0.526,0.554
Chr19,13214119,SNP_1136,G,A,483,good,False,none,0.761,0.787,0.65
Chr19,13330756,SNP_1137,T,A,708,good,False,none,0.744,0.916,0.679
Chr19,13336025,SNP_1138,A,T,882,good,False,none,0.152,0.148,0.146
Chr19,13459367,SNP_1139,C,A,151,good,False,none,0.471,0.562,0.535
Chr19,13676042,SNP_1140,C,T,854,good,False,none,0.294,0.303,0.258
Chr20,261488,SNP_1141,C,A,130,good,False,none,0.614,0.674,0.515
Chr20,531741,SNP_1142,T,G,241,good,False,none,0.48,0.535,0.55
Chr20,745489,SNP_1143,A,C,577,good,False,none,0.434,0.543,0.544
Chr20,1130476,SNP_1144,A,G,211,good,False,none,0.493,0.484,0.507
Chr20,1187790,SNP_1145,A,G,611,good,False,none,0.175,0.118,0.212
Chr20,1518827,SNP_1146,G,A,302,good,False,none,0.624,0.453,0.416
Chr20,1614221,SNP_1147,T,A,847,good,False,none,0.689,0.703,0.712
Chr20,1650300,SNP_1148,A,G,903,good,False,none,0.909,0.752,0.944
Chr20,2102593,SNP_1149,A,C,171,good,False,none,0.557,0.541,0.546
Chr20,2304101,SNP_1150,T,C,116,good,False,none,0.891,0.898,0.879
Chr20,3366298,SNP_1151,T,A,427,good,False,none,0.165,0.064,0.079
Chr20,3483608,SNP_1152,T,A,402,good,False,none,0.793,0.616,0.62
Chr20,3492534,SNP_1153,T,C,825,good,False,none,0.397,0.388,0.397
Chr20,3645632,SNP_1154,C,G,258,good,False,none,0.179,0.142,0.195
Chr20,3829023,SNP_1155,A,T,706,good,False,none,0.757,0.901,0.9
Chr20,4026447,SNP_1156,G,A,729,good,False,none,0.876,0.764,0.807
Chr20,4092668,SNP_1157,G,C,592,high_missing,False,none,0.366,0.608,0.439
Chr20,4301488,SNP_1158,G,C,258,good,False,none,0.198,0.164,0.37
Chr20,4740185,SNP_1159,C,G,172,high_missing,False,none,0.456,0.491,0.428
Chr20,5234462,SNP_1160,G,A,770,good,False,none,0.774,0.797,0.848
Chr20,5740907,SNP_1161,A,C,298,high_missing,False,none,0.645,0.599,0.676
Chr20,5787222,SNP_1162,T,C,837,low_maf,False,none,0.011,0.016,0.013
Chr20,6012051,SNP_1163,A,T,408,good,False,none,0.576,0.44,0.351
Chr20,6032477,SNP_1164,G,C,786,low_maf,False,none,0.006,0.001,0.001
Chr20,6537770,SNP_1165,A,T,144,good,False,none,0.675,0.867,0.661
Chr20,6767869,SNP_1166,C,A,469,low_maf,False,none,0.003,0.006,0.003
Chr20,7166391,SNP_1167,A,C,420,good,False,none,0.32,0.44,0.618
Chr20,7675680,SNP_1168,C,A,232,good,False,none,0.214,0.202,0.205
Chr20,7769685,SNP_1169,C,G,533,low_maf,False,none,0.022,0.022,0.013
Chr20,7874635,SNP_1170,C,G,382,good,False,none,0.368,0.425,0.444
Chr20,8150076,SNP_1171,A,C,219,good,False,none,0.134,0.139,0.166
Chr20,8256854,SNP_1172,T,C,718,good,False,none,0.245,0.267,0.204
Chr20,8629984,SNP_1173,C,A,204,low_maf,False,none,0.007,0.007,0.011
Chr20,8745924,SNP_1174,T,A,255,good,False,none,0.195,0.345,0.187
Chr20,8861212,SNP_1175,G,T,112,good,False,none,0.819,0.881,0.764
Chr20,8988520,SNP_1176,A,C,903,high_missing,False,none,0.194,0.197,0.144
Chr20,9180853,SNP_1177,C,G,634,good,False,none,0.253,0.261,0.285
Chr20,9621001,SNP_1178,A,G,930,high_missing,False,none,0.889,0.95,0.839
Chr20,9835570,SNP_1179,A,C,323,good,False,none,0.804,0.795,0.603
Chr20,10108948,SNP_1180,G,T,586,good,False,none,0.364,0.657,0.58
Chr20,10153008,SNP_1181,G,C,228,good,False,none,0.752,0.73,0.729
Chr20,10199219,SNP_1182,C,G,677,good,False,none,0.882,0.817,0.912
Chr20,10338460,SNP_1183,T,A,649,good,False,none,0.34,0.633,0.314
Chr20,10380273,SNP_1184,G,A,340,good,False,none,0.666,0.649,0.827
Chr20,10545294,SNP_1185,T,A,350,good,False,none,0.344,0.255,0.314
Chr20,11165710,SNP_1186,G,T,654,good,False,none,0.794,0.748,0.686
Chr20,11165990,SNP_1187,C,T,570,good,False,none,0.5,0.791,0.675
Chr20,11231880,SNP_1188,T,G,907,good,False,none,0.638,0.591,0.783
Chr20,11245159,SNP_1189,T,G,367,good,False,none,0.131,0.12,0.054
Chr20,11287211,SNP_1190,G,T,714,good,False,none,0.655,0.69,0.584
Chr20,11430041,SNP_1191,G,T,251,good,False,none,0.755,0.843,0.713
Chr20,11434997,SNP_1192,A,C,967,good,False,none,0.183,0.323,0.243
Chr20,11577021,SNP_1193,G,A,357,good,False,none,0.368,0.357,0.224
Chr20,11676540,SNP_1194,C,A,605,good,False,none,0.446,0.474,0.491
Chr20,11793360,SNP_1195,C,G,206,good,False,none,0.336,0.364,0.374
Chr20,12133624,SNP_1196,C,G,941,low_maf,False,none,0.001,0.004,0.007
Chr20,12250206,SNP_1197,A,C,729,good,False,none,0.384,0.451,0.404
Chr20,12473903,SNP_1198,T,C,667,good,False,none,0.405,0.675,0.343
Chr20,12939042,SNP_1199,A,C,936,good,False,none,0.478,0.484,0.494
Chr20,13037904,SNP_1200,A,C,879,good,False,none,0.509,0.515,0.495