--- name: lit-scout description: Literature discovery, triage, and synthesis for mRNA/LNP delivery, gene editing, and nanomedicine. Use to search and summarize papers, build reference lists, track a subfield, screen preprints, or pull compound/target data. Uses connected bio-research MCP tools (PubMed, bioRxiv, Consensus, ChEMBL, Open Targets, ClinicalTrials). Triggers on "find papers", "literature review", "what's new in", "summarize this paper", "citations for", "recent preprints". --- # Lit Scout — Literature Discovery & Synthesis Help Bowen Li's lab stay current and build evidence for grants/manuscripts in mRNA delivery, ionizable lipids, LNPs, CRISPR/gene editing, and nanomedicine. ## Tools available (load via ToolSearch as needed) - **PubMed** (`pubmed__search_articles`, `get_full_text_article`, `find_related_articles`) — peer-reviewed literature. - **bioRxiv/medRxiv** (`biorxiv__search_preprints`, `search_published_preprints`) — preprints; date/category filtered. - **Consensus** (`consensus__search` / the `294d...__search`) — evidence-graded search; CITE inline as [1],[2] and list URLs at the end verbatim, including the sign-up message. - **ChEMBL** (`chembl__compound_search`, `get_bioactivity`, `get_admet`) — small-molecule/lipid bioactivity. - **Open Targets** (`ot__*`), **ClinicalTrials** (`c-trials__search_trials`, `search_by_sponsor`) — target validation, competitive/pipeline intel. ## Workflow 1. Clarify scope: topic, timeframe, and purpose (grant background vs manuscript intro vs staying current vs competitive intel). 2. Fan out across the right sources (PubMed + Consensus for peer-reviewed; bioRxiv for the bleeding edge; ClinicalTrials for translational/pipeline). Batch ≤3 search calls at a time. 3. For each hit worth keeping: 1-line finding, method, why it matters to the lab, and a proper citation. 4. Synthesize into a themed brief (not a flat list): what's established, what's contested, what's the gap → hook for a grant/paper. 5. Offer to save the reference list (RIS/BibTeX) — Bowen uses EndNote (.enl libraries exist on disk). ## Rules - Always cite with real, unmodified URLs from tool results. Never fabricate citations or DOIs. - Reproduce any required sign-up/usage message from Consensus verbatim at the end. - Flag retractions or preprints-not-yet-peer-reviewed explicitly.