{
  "name": "life-sciences",
  "owner": {
    "name": "Anthropic",
    "email": "support@anthropic.com"
  },
  "metadata": {
    "version": "1.0.0",
    "description": "MCP servers and skills for life sciences research, data analysis, and discovery"
  },
  "plugins": [
    {
      "name": "10x-genomics",
      "source": "./10x-genomics",
      "description": "10x Genomics Cloud MCP server for accessing analysis data and workflows",
      "category": "life-sciences",
      "tags": ["genomics", "bioinformatics", "analysis"]
    },
    {
      "name": "pubmed",
      "source": "./pubmed",
      "description": "PubMed MCP server for searching biomedical literature and research articles",
      "category": "life-sciences",
      "tags": ["research", "literature", "biomedical"]
    },
    {
      "name": "biorender",
      "source": "./biorender",
      "description": "BioRender MCP server for creating and accessing scientific illustrations",
      "category": "life-sciences",
      "tags": ["visualization", "diagrams", "illustrations"]
    },
    {
      "name": "synapse",
      "source": "./synapse",
      "description": "Synapse.org MCP server by Sage Bionetworks for collaborative research data management",
      "category": "life-sciences",
      "tags": ["research", "data-management", "collaboration"]
    },
    {
      "name": "wiley-scholar-gateway",
      "source": "./wiley-scholar-gateway",
      "description": "Scholar Gateway MCP server by Wiley for accessing academic research and publications",
      "category": "life-sciences",
      "tags": ["research", "academic", "publications"]
    },
    {
      "name": "biorxiv",
      "source": "./biorxiv",
      "description": "Access to bioRxiv and medRxiv preprint data",
      "category": "life-sciences",
      "tags": ["research", "preprints", "biology", "medical"]
    },
    {
      "name": "clinical-trials",
      "source": "./clinical-trials",
      "description": "Access ClinicalTrials.gov data",
      "category": "life-sciences",
      "tags": ["clinical-trials", "research", "medical", "fda"]
    },
    {
      "name": "chembl",
      "source": "./chembl",
      "description": "Access to the ChEMBL Database",
      "category": "life-sciences",
      "tags": ["drug-discovery", "chemistry", "bioactive-molecules", "bioactivity"]
    },
    {
      "name": "owkin",
      "source": "./owkin",
      "description": "Interact with AI agents built for biology",
      "category": "life-sciences",
      "tags": ["ai", "drug-discovery", "precision-medicine", "histopathology"]
    },
    {
      "name": "open-targets",
      "source": "./open-targets",
      "description": "Drug target discovery and prioritisation platform",
      "category": "life-sciences",
      "tags": ["drug-targets", "genomics", "research", "therapeutics"]
    },
    {
      "name": "single-cell-rna-qc",
      "source": "./",
      "description": "Quality control for single-cell RNA-seq data following scverse best practices",
      "category": "life-sciences",
      "tags": ["bioinformatics", "genomics", "single-cell", "quality-control", "qc"],
      "strict": false,
      "skills": [
        "./single-cell-rna-qc"
      ]
    },
    {
      "name": "instrument-data-to-allotrope",
      "source": "./",
      "description": "Convert instrument data to Allotrope Simple Model (ASM) format",
      "category": "life-sciences",
      "tags": ["data-conversion", "allotrope", "instruments", "standardization"],
      "strict": false,
      "skills": [
        "./instrument-data-to-allotrope"
      ]
    },
    {
      "name": "nextflow-development",
      "source": "./",
      "description": "Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on local or public GEO/SRA sequencing data",
      "category": "life-sciences",
      "tags": ["bioinformatics", "nextflow", "pipelines", "rna-seq", "variant-calling", "atac-seq", "genomics"],
      "strict": false,
      "skills": [
        "./nextflow-development"
      ]
    },
    {
      "name": "scvi-tools",
      "source": "./",
      "description": "Deep learning toolkit for single-cell omics analysis using scvi-tools",
      "category": "life-sciences",
      "tags": ["bioinformatics", "single-cell", "deep-learning", "scvi-tools", "integration"],
      "strict": false,
      "skills": [
        "./scvi-tools"
      ]
    },
    {
      "name": "clinical-trial-protocol",
      "source": "./",
      "description": "Generate FDA/NIH-compliant clinical trial protocols for medical devices or drugs",
      "category": "life-sciences",
      "tags": ["clinical-trials", "fda", "protocol", "regulatory"],
      "strict": false,
      "skills": [
        "./clinical-trial-protocol-skill"
      ]
    },
    {
      "name": "scientific-problem-selection",
      "source": "./",
      "description": "Systematic framework for scientific problem selection and strategic research decisions based on Fischbach & Walsh methodology",
      "category": "life-sciences",
      "tags": ["research-strategy", "problem-selection", "scientific-method", "project-planning"],
      "strict": false,
      "skills": [
        "./scientific-problem-selection"
      ]
    },
    {
      "name": "tooluniverse",
      "source": "./tooluniverse",
      "description": "Democratizing AI scientists with ToolUniverse - AI agents and tools for scientific discovery and automation",
      "category": "life-sciences",
      "tags": ["ai-agents", "science", "tool-use", "reasoning", "automation"]
    },
    {
      "name": "medidata",
      "source": "./medidata",
      "description": "Medidata's MCP Connector for Claude with Platform Help and Predictive Site Ranking for clinical trials",
      "category": "life-sciences",
      "tags": ["clinical-trials", "site-ranking", "trial-planning", "medidata"]
    },
    {
      "name": "consensus",
      "source": "./consensus",
      "description": "Consensus MCP server for AI-powered search across peer-reviewed scientific research papers",
      "category": "life-sciences",
      "tags": ["research", "literature", "academic", "evidence-synthesis"]
    },
    {
      "name": "cortellis",
      "source": "./cortellis",
      "description": "Cortellis Regulatory Intelligence MCP server by Clarivate for global drug regulatory data and intelligence",
      "category": "life-sciences",
      "tags": ["regulatory", "drug-development", "intelligence", "compliance"]
    },
    {
      "name": "adisinsight",
      "source": "./adisinsight",
      "description": "AdisInsight MCP server by Springer Nature for drug development pipeline, clinical trials, and deals intelligence",
      "category": "life-sciences",
      "tags": ["drug-development", "pipeline", "clinical-trials", "deals"]
    }
  ]
}