openapi: 3.2.0 info: license: name: Apache 2.0 url: http://www.apache.org/licenses/LICENSE-2.0.html title: Benchling Procedure Method Definition Version API version: 2.0.0 description: 'A versioned method within a procedure flowchart. Methods are the building blocks of procedures, representing discrete experimental operations that scientists perform. Each method contains step groups (see `stepGroups` and `ProcedureStepGroup`) organized by execution phase, along with parameter settings for data collection (`dataParameterSettings`), material inputs (`materialInputSettings`), material outputs (`materialOutputSettings`), and equipment (`equipmentSettings`). Methods appear as nodes in the procedure flowchart (see `ProcedureFlowchartVersion`) and are connected by edges that define execution order and material flow.' servers: - url: /api/v3 security: - oAuth: [] - basicApiKeyAuth: [] tags: - description: 'A versioned method within a procedure flowchart. Methods are the building blocks of procedures, representing discrete experimental operations that scientists perform. Each method contains step groups (see `stepGroups` and `ProcedureStepGroup`) organized by execution phase, along with parameter settings for data collection (`dataParameterSettings`), material inputs (`materialInputSettings`), material outputs (`materialOutputSettings`), and equipment (`equipmentSettings`). Methods appear as nodes in the procedure flowchart (see `ProcedureFlowchartVersion`) and are connected by edges that define execution order and material flow.' name: ProcedureMethodDefinitionVersion x-bnch-organization: Benchling paths: /procedure-method-definition-version/items: get: description: List ProcedureMethodDefinitionVersion items. operationId: ProcedureMethodDefinitionVersion.List parameters: - $ref: '#/components/parameters/createdAt.gt' - $ref: '#/components/parameters/createdAt.gte' - $ref: '#/components/parameters/createdAt.lt' - $ref: '#/components/parameters/createdAt.lte' - $ref: '#/components/parameters/id.anyOf' - $ref: '#/components/parameters/name.anyOf' - $ref: '#/components/parameters/name.anyOf.caseSensitive' - $ref: '#/components/parameters/nextToken' - $ref: '#/components/parameters/omit' - $ref: '#/components/parameters/pageSize' - $ref: '#/components/parameters/returning' - description: 'Method by which to order results. Valid sorts are: createdAt (created time, oldest first). Use :asc or :desc to specify ascending or descending order. Default is createdAt:desc.' in: query name: sort schema: default: createdAt:desc enum: - createdAt:asc - createdAt:desc type: string - description: Set to true to access beta operations via /api/v3. in: header name: EARLY-ACCESS required: false schema: type: string responses: '200': content: application/json: schema: $ref: '#/components/schemas/ProcedureMethodDefinitionVersionPaginatedList' description: OK headers: {} '400': $ref: '#/components/responses/BadRequest' '403': $ref: '#/components/responses/Forbidden' '404': $ref: '#/components/responses/NotFound' '429': $ref: '#/components/responses/TooManyRequests' '500': $ref: '#/components/responses/InternalServerError' summary: List ProcedureMethodDefinitionVersion items tags: - ProcedureMethodDefinitionVersion x-bnch-rate-limit-tier: 4 /procedure-method-definition-version/{procedure_method_definition_version_id}: get: description: Get a single ProcedureMethodDefinitionVersion by ID. operationId: ProcedureMethodDefinitionVersion.Get parameters: - description: ID of the ProcedureMethodDefinitionVersion. in: path name: procedure_method_definition_version_id required: true schema: type: string - $ref: '#/components/parameters/returning' - $ref: '#/components/parameters/omit' - description: Set to true to access beta operations via /api/v3. in: header name: EARLY-ACCESS required: false schema: type: string responses: '200': content: application/json: schema: $ref: '#/components/schemas/ProcedureMethodDefinitionVersion' description: OK headers: {} '400': $ref: '#/components/responses/BadRequest' '403': $ref: '#/components/responses/Forbidden' '404': $ref: '#/components/responses/NotFound' '429': $ref: '#/components/responses/TooManyRequests' '500': $ref: '#/components/responses/InternalServerError' summary: Get ProcedureMethodDefinitionVersion by ID tags: - ProcedureMethodDefinitionVersion x-bnch-rate-limit-tier: 5 components: parameters: pageSize: description: Number of results to return. Defaults to 50, maximum of 100. in: query name: pageSize schema: type: integer createdAt.gte: description: Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created at or after the specified time. e.g. >= 2017-04-30. in: query name: createdAt.gte schema: format: datetime type: string id.anyOf: description: Restricts results to those matching any of the specified IDs. Comma-separated list. explode: false in: query name: id.anyOf schema: items: type: string maxItems: 100 type: array createdAt.gt: description: Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created after the specified time. e.g. > 2017-04-30. in: query name: createdAt.gt schema: format: datetime type: string createdAt.lt: description: Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created before the specified time. e.g. < 2017-04-30. in: query name: createdAt.lt schema: format: datetime type: string returning: description: Comma-separated list of top-level fields to include in each returned item. Cannot overlap with omit. explode: false in: query name: returning schema: items: type: string type: array nextToken: description: Token for pagination in: query name: nextToken schema: type: string name.anyOf: description: Restricts results to those that match any of the specified names. Case insensitive. Warning - this filter can be non-performant due to case insensitivity. Ensure only one name filter is used at a time. Comma-separated list. explode: false in: query name: name.anyOf schema: items: type: string maxItems: 100 type: array name.anyOf.caseSensitive: description: Restricts results to those that match any of the specified names. Case sensitive. Ensure only one name filter is used at a time. Comma-separated list. explode: false in: query name: name.anyOf.caseSensitive schema: items: type: string maxItems: 100 type: array omit: description: Comma-separated list of top-level fields to omit from each returned item. Cannot overlap with returning. explode: false in: query name: omit schema: items: type: string type: array createdAt.lte: description: Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created at or before the specified time. e.g. <= 2017-04-30. in: query name: createdAt.lte schema: format: datetime type: string responses: NotFound: content: application/problem+json: schema: $ref: '#/components/schemas/GeneralError' description: Not Found TooManyRequests: content: application/problem+json: schema: $ref: '#/components/schemas/GeneralError' description: Too Many Requests BadRequest: content: application/problem+json: schema: $ref: '#/components/schemas/GeneralError' description: Bad Request Forbidden: content: application/problem+json: schema: $ref: '#/components/schemas/GeneralError' description: Forbidden InternalServerError: content: application/problem+json: schema: $ref: '#/components/schemas/InternalServerError' description: Internal Server Error schemas: ProcedureEquipmentSetting: description: 'Configures equipment usage within a method, linking a parameter definition (`ProcedureParameterVersion`) with its planned values. Equipment settings specify instruments or devices required to perform the method step.' properties: __typename: type: string values: items: $ref: '#/components/schemas/ProcedureParameterPlannedValueRef' type: array version: $ref: '#/components/schemas/ProcedureParameterVersionRef' type: object ProcedureMaterialInputSetting: description: 'Configures a material input within a method, linking a parameter definition (`ProcedureParameterVersion`) with its planned values. Material inputs specify reagents, samples, or other substances consumed by the method step.' properties: __typename: type: string values: items: $ref: '#/components/schemas/ProcedureParameterPlannedValueRef' type: array version: $ref: '#/components/schemas/ProcedureParameterVersionRef' type: object ProcedureDataParameterSetting: description: 'Configures a data parameter within a method, linking a parameter definition (`ProcedureParameterVersion`) with its planned values. Data parameters capture experimental measurements or observations during procedure execution.' properties: __typename: type: string values: items: $ref: '#/components/schemas/ProcedureParameterPlannedValueRef' type: array version: $ref: '#/components/schemas/ProcedureParameterVersionRef' type: object InternalServerError: properties: detail: type: - 'null' - string - object errorId: type: string instance: type: string status: type: integer title: type: - 'null' - string type: type: string required: - type - title - detail - status - instance type: object ProcedureParameterPlannedValueRef: properties: __typename: type: string id: format: api_id type: string type: object ProcedureStepGroup: description: 'Groups procedure steps by their execution phase within a method. Each method contains multiple step groups (see `ProcedureStepGroupType`), and each group contains an ordered list of steps (see `steps` and `ProcedureStepDefinitionVersion`) to be executed in sequence.' properties: __typename: type: string group: enum: - PRE_RUN - RUN - POST_RUN type: string steps: items: $ref: '#/components/schemas/ProcedureStepDefinitionVersionRef' type: array type: object ProcedureMethodDefinitionVersionPaginatedList: additionalProperties: false properties: items: items: $ref: '#/components/schemas/ProcedureMethodDefinitionVersion' type: array nextToken: type: string type: object ProcedureMaterialOutputSetting: description: 'Configures a material output within a method, linking to a parameter definition (`ProcedureParameterVersion`). Material outputs specify products or intermediates produced by the method step that can flow to subsequent methods via material edges.' properties: __typename: type: string version: $ref: '#/components/schemas/ProcedureParameterVersionRef' type: object ProcedureStepDefinitionVersionRef: properties: __typename: type: string id: format: api_id type: string type: object ProcedureMethodDefinitionVersion: description: 'A versioned method within a procedure flowchart. Methods are the building blocks of procedures, representing discrete experimental operations that scientists perform. Each method contains step groups (see `stepGroups` and `ProcedureStepGroup`) organized by execution phase, along with parameter settings for data collection (`dataParameterSettings`), material inputs (`materialInputSettings`), material outputs (`materialOutputSettings`), and equipment (`equipmentSettings`). Methods appear as nodes in the procedure flowchart (see `ProcedureFlowchartVersion`) and are connected by edges that define execution order and material flow.' properties: __typename: type: string createdAt: format: datetime type: string dataParameterSettings: items: $ref: '#/components/schemas/ProcedureDataParameterSetting' type: array description: type: string equipmentSettings: items: $ref: '#/components/schemas/ProcedureEquipmentSetting' type: array id: type: string materialInputSettings: items: $ref: '#/components/schemas/ProcedureMaterialInputSetting' type: array materialOutputSettings: items: $ref: '#/components/schemas/ProcedureMaterialOutputSetting' type: array name: type: string nodeId: type: string stepGroups: items: $ref: '#/components/schemas/ProcedureStepGroup' type: array type: object ProcedureParameterVersionRef: properties: __typename: type: string id: format: api_id type: string type: object GeneralError: properties: detail: type: - 'null' - string - object instance: type: string status: type: integer title: type: - 'null' - string type: type: string required: - type - title - detail - status - instance type: object securitySchemes: basicApiKeyAuth: description: Use issued API key for standard access to the API scheme: basic type: http basicClientIdSecretAuth: description: Auth used as part of client credentials OAuth flow prior to receiving a bearer token. scheme: basic type: http oAuth: description: OAuth2 Client Credentials flow intended for service access flows: clientCredentials: scopes: {} tokenUrl: /oauth/token type: oauth2