openapi: 3.2.0
info:
  title: Phi — Protein Design Tools API
  description: 'Phi is a biomodal computation platform for protein design. Submit structure-prediction and sequence-design jobs, track their status, and retrieve scored results — all via a single REST API.


    ## Authentication

    All endpoints require an API key supplied as `Authorization: Bearer <key>` or a Clerk session token. Organisation ID is derived automatically from Clerk tokens; static-key callers must include `X-Organization-ID`.


    ## Quick links

    - `POST /v1/phi/jobs` — submit a job

    - `GET  /v1/phi/jobs/{job_id}/status` — poll status

    - `GET  /v1/phi/jobs/{job_id}/scores` — download scored results

    '
  version: 1.0.0
servers:
- url: https://api.dyno-agents.app
  description: Production
- url: http://localhost:8000
  description: Local development
tags:
- name: tools
paths:
  /v1/phi/tools/:
    get:
      tags:
      - tools
      summary: List Tools
      description: List all available system tools.
      operationId: list_tools_v1_phi_tools__get
      parameters:
      - name: category
        in: query
        required: false
        schema:
          anyOf:
          - type: string
          - type: 'null'
          title: Category
      responses:
        '200':
          description: Successful Response
          content:
            application/json:
              schema:
                type: object
                additionalProperties: true
                title: Response List Tools V1 Phi Tools  Get
        '422':
          description: Validation Error
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/HTTPValidationError'
  /v1/phi/tools/{tool_id}:
    get:
      tags:
      - tools
      summary: Get Tool
      description: Get tool details including parameter schema.
      operationId: get_tool_v1_phi_tools__tool_id__get
      parameters:
      - name: tool_id
        in: path
        required: true
        schema:
          type: string
          title: Tool Id
      responses:
        '200':
          description: Successful Response
          content:
            application/json:
              schema:
                type: object
                additionalProperties: true
                title: Response Get Tool V1 Phi Tools  Tool Id  Get
        '422':
          description: Validation Error
          content:
            application/json:
              schema:
                $ref: '#/components/schemas/HTTPValidationError'
  /v1/phi/tools/categories/:
    get:
      tags:
      - tools
      summary: List Categories
      description: List all tool categories.
      operationId: list_categories_v1_phi_tools_categories__get
      responses:
        '200':
          description: Successful Response
          content:
            application/json:
              schema:
                additionalProperties: true
                type: object
                title: Response List Categories V1 Phi Tools Categories  Get
components:
  schemas:
    HTTPValidationError:
      properties:
        detail:
          items:
            $ref: '#/components/schemas/ValidationError'
          type: array
          title: Detail
      type: object
      title: HTTPValidationError
    ValidationError:
      properties:
        loc:
          items:
            anyOf:
            - type: string
            - type: integer
          type: array
          title: Location
        msg:
          type: string
          title: Message
        type:
          type: string
          title: Error Type
      type: object
      required:
      - loc
      - msg
      - type
      title: ValidationError