generated: '2026-08-10'
description: >-
  Agent Skills for the Dyno Phi Protein Design API. Dyno PUBLISHES its own Claude
  Code Agent Skill in the phi-cli repository — that file is saved here verbatim.
  The two REST-level skills alongside it are generated by API Evangelist from the
  provider's OpenAPI and are grounded in real operationIds only.
skills:
- file: dyno-phi.md
  name: phi
  method: searched
  source: https://github.com/dynotx/phi-cli/blob/main/skills/phi/SKILL.md
  provider_published: true
  surface: cli
  allowed_tools: Bash(phi *)
  description: >-
    Dyno's own Claude Code skill for the phi CLI — fetch structures, run
    folding/inverse-folding pipelines, filter and score candidates, download
    results, run research queries. Saved verbatim; not edited.
  also_distributed_as:
  - {kind: claude-code-plugin, name: dyno-phi, version: 0.1.1, path: 'https://github.com/dynotx/phi-cli/tree/main/phi-plugin'}
  - {kind: claude-code-marketplace, manifest: 'https://github.com/dynotx/phi-cli/blob/main/.claude-plugin/marketplace.json', owner: 'Dyno Therapeutics <engineering@dynotx.com>'}
- file: dyno-score-a-binder-design-set.md
  name: dyno-score-a-binder-design-set
  method: generated
  source: openapi/dyno-phi-openapi.yml
  provider_published: false
  surface: rest
  description: Upload a structure set and run the filter pipeline to scored results, using the REST API directly rather than the CLI.
- file: dyno-run-a-published-protocol.md
  name: dyno-run-a-published-protocol
  method: generated
  source: openapi/dyno-phi-openapi.yml
  provider_published: false
  surface: rest
  description: Discover, fork and execute a published Protocol (a shareable workflow template) and collect its artifacts.
grounding_note: >-
  Every operationId referenced in the generated skills was read out of
  openapi/dyno-phi-openapi.yml. No operation, parameter or endpoint is invented.