generated: '2026-08-04'
method: generated
source: openapi/element-biosciences-cloud-api-openapi-original.yml
searched:
- {url: 'https://docs.elembio.io/AGENTS.md', status: 404}
- {url: 'https://raw.githubusercontent.com/Elembio/.github/main/AGENTS.md', status: 404}
- {url: 'https://docs.elembio.io/skills', status: 404}
note: |
  Element Biosciences publishes no agent skills or AGENTS.md of its own. These four are
  generated by API Evangelist from the real OpenAPI: every operationId referenced below
  exists verbatim in openapi/element-biosciences-cloud-api-openapi-original.yml, and the
  conventions, scope names, status enums and error reasons are taken from the provider's
  own published documentation. They mirror the four marquee flows the Cloud API and the
  elembio CLI are actually built for.
skills:
- file: element-biosciences-monitor-sequencing-fleet.md
  name: Monitor the Element Biosciences sequencing fleet
  description: Check every registered AVITI instrument and surface runs in flight or recently failed.
  api: openapi/element-biosciences-cloud-api-openapi-original.yml
  operations: [InstrumentService_ListInstruments, InstrumentService_GetInstrument, RunService_ListRuns, AuthService_GetAuth]
  scopes: ['instruments:read', 'runs:read']
- file: element-biosciences-find-and-download-run-files.md
  name: Find a completed run and download its files
  description: Locate a completed run by quality criteria and retrieve its outputs via vended short-lived S3 credentials.
  api: openapi/element-biosciences-cloud-api-openapi-original.yml
  operations: [RunService_ListRuns, RunService_GetRun, RunService_ListRunFiles, RunService_GetRunDownloadCredentials]
  scopes: ['runs:read', 'runs:download']
- file: element-biosciences-triage-failed-execution.md
  name: Triage a failed ElemBio Cloud analysis execution
  description: Find failed Bases2Fastq/Cells2Stats executions, read logs, and tie failures back to the source run.
  api: openapi/element-biosciences-cloud-api-openapi-original.yml
  operations: [ExecutionService_ListExecutions, ExecutionService_GetExecution, ExecutionService_GetExecutionLogs, ExecutionService_ListExecutionFiles, RunService_GetRun]
  scopes: ['executions:read', 'executions:logs', 'runs:read']
- file: element-biosciences-audit-api-key-access.md
  name: Audit what an ElemBio Cloud API key can reach
  description: Verify a key's tenant and scopes, then enumerate the resources it can actually see.
  api: openapi/element-biosciences-cloud-api-openapi-original.yml
  operations: [AuthService_GetAuth, RunService_ListRuns, ExecutionService_ListExecutions, InstrumentService_ListInstruments, StorageConnectionService_ListStorageConnections, StorageConnectionService_GetStorageConnection]
  scopes: []