apiVersion: naftiko.dev/v1
kind: Capability
metadata:
  name: roche-data-science
  provider: roche
  description: >-
    Capability composition rooted in Roche's open-source data-science tooling
    for clinical pipelines and repository governance.
spec:
  workflows:
    - name: clinical-file-ingest
      description: Read SAS/SPSS/Stata clinical study files into pandas
      steps:
        - id: open-file
          operation: pyreadstat.read_sas7bdat
        - id: validate
          operation: pyreadstat.metadata.check
          dependsOn: open-file
    - name: repo-scaffold-sync
      description: Apply a templated scaffold to a Git repository
      steps:
        - id: apply-template
          operation: foxops.apply
        - id: verify
          operation: foxops.diff
          dependsOn: apply-template
    - name: oligo-property-prediction
      description: Train and evaluate an oligonucleotide property model
      steps:
        - id: featurize
          operation: oligogym.featurize
        - id: train
          operation: oligogym.train
          dependsOn: featurize
        - id: evaluate
          operation: oligogym.evaluate
          dependsOn: train
  licensing:
    - pyreadstat: Apache-2.0
    - foxops: Apache-2.0
    - oligogym: Apache-2.0