{
  "opencollection": "1.0.0",
  "info": {
    "name": "STRING REST Annotation API",
    "version": "12.0"
  },
  "items": [
    {
      "info": {
        "name": "annotation",
        "type": "folder"
      },
      "items": [
        {
          "info": {
            "name": "Functional Annotation",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://string-db.org/api/:format/functional_annotation",
            "params": [
              {
                "name": "format",
                "value": "",
                "type": "path",
                "description": "Output format"
              },
              {
                "name": "identifiers",
                "value": "",
                "type": "query",
                "description": "Protein identifiers, newline-separated (%0d in URL)"
              },
              {
                "name": "species",
                "value": "",
                "type": "query",
                "description": "NCBI taxon ID to restrict results to a specific organism. Common values: 9606 (human), 10090 (mouse), 10116 (rat), 7227 (D. melanogaster), 6239 (C. elegans), 4932 (S. cerevisiae), 3702 (A. thaliana), 7955 (zebrafish).\n"
              },
              {
                "name": "allow_pubmed",
                "value": "",
                "type": "query",
                "description": "Include PubMed text mining annotations (1=include)"
              },
              {
                "name": "caller_identity",
                "value": "",
                "type": "query",
                "description": "A string identifying your application or organization. Strongly recommended; helps STRING admins contact you if there are issues.\n"
              }
            ]
          },
          "docs": "Retrieve all functional annotations associated with input proteins. Includes GO terms, KEGG pathways, Pfam/InterPro/SMART domains, tissue expression (COMPARTMENTS), and disease associations.\n"
        },
        {
          "info": {
            "name": "Functional Terms",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://string-db.org/api/:format/functional_terms",
            "params": [
              {
                "name": "format",
                "value": "",
                "type": "path",
                "description": "Output format"
              },
              {
                "name": "identifier",
                "value": "",
                "type": "query",
                "description": "Functional term identifier (e.g. GO:0008150, hsa00010, PF00069)"
              },
              {
                "name": "category",
                "value": "",
                "type": "query",
                "description": "Term category to restrict search"
              },
              {
                "name": "species",
                "value": "",
                "type": "query",
                "description": "NCBI taxon ID to restrict results to a specific organism. Common values: 9606 (human), 10090 (mouse), 10116 (rat), 7227 (D. melanogaster), 6239 (C. elegans), 4932 (S. cerevisiae), 3702 (A. thaliana), 7955 (zebrafish).\n"
              },
              {
                "name": "caller_identity",
                "value": "",
                "type": "query",
                "description": "A string identifying your application or organization. Strongly recommended; helps STRING admins contact you if there are issues.\n"
              }
            ]
          },
          "docs": "Retrieve proteins and details associated with specific functional terms (GO terms, KEGG pathways, Reactome pathways, Pfam domains, etc.).\n"
        },
        {
          "info": {
            "name": "Gene Set Description",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://string-db.org/api/:format/geneset_description",
            "params": [
              {
                "name": "format",
                "value": "",
                "type": "path",
                "description": "Output format"
              },
              {
                "name": "identifiers",
                "value": "",
                "type": "query",
                "description": "Protein identifiers, newline-separated (%0d in URL)"
              },
              {
                "name": "species",
                "value": "",
                "type": "query",
                "description": "NCBI taxon ID to restrict results to a specific organism. Common values: 9606 (human), 10090 (mouse), 10116 (rat), 7227 (D. melanogaster), 6239 (C. elegans), 4932 (S. cerevisiae), 3702 (A. thaliana), 7955 (zebrafish).\n"
              },
              {
                "name": "caller_identity",
                "value": "",
                "type": "query",
                "description": "A string identifying your application or organization. Strongly recommended; helps STRING admins contact you if there are issues.\n"
              }
            ]
          },
          "docs": "Retrieve auto-generated textual descriptions for a set of proteins, summarizing the most relevant functional themes in the gene set.\n"
        }
      ]
    }
  ],
  "bundled": true
}