[project]
name = "cognirepo"
version = "2.4.1"
description = "Local cognitive infrastructure layer for AI agents"
readme = "README.md"
requires-python = ">=3.11,<3.15"
license = "MIT"
classifiers = [
    "Development Status :: 5 - Production/Stable",
    "Intended Audience :: Developers",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: 3 :: Only",
    "Topic :: Software Development :: Libraries :: Python Modules",
    "Topic :: Scientific/Engineering :: Artificial Intelligence",
    "Topic :: Software Development :: Version Control",
    "Typing :: Typed",
]
dependencies = [
    # core
    "faiss-cpu==1.13.2",
    "numpy==2.4.4",
    # ONNX-based embeddings — no PyTorch/CUDA. ~50 MB install vs ~2 GB.
    # Same model (all-MiniLM-L6-v2, dim=384) as before.
    "fastembed>=0.3.6",
    # MCP server
    "mcp[cli]==1.28.1",
    # REST API + Server
    "fastapi>=0.115.0",
    "uvicorn>=0.30.0",
    "httpx>=0.27.0",
    # graph + indexer
    "networkx>=3.3",
    "watchdog>=4.0",
    "tree-sitter>=0.23",
    # shared
    "pydantic==2.13.3",
    # env loading
    "python-dotenv>=1.0",
    # BM25 keyword retrieval (episodic search)
    "rank-bm25>=0.2.2",
    # cross-process file locking (concurrent agent writes)
    "filelock>=3.12",
    # token counting — hard dependency, no silent fallback
    "tiktoken>=0.7",
    # system metrics + connectivity
    "psutil>=6.0",
    "requests>=2.33",
    "python-multipart>=0.0.30",
]

[project.urls]
Homepage = "https://github.com/ashlesh-t/cognirepo"
"Bug Tracker" = "https://github.com/ashlesh-t/cognirepo/issues"
Documentation = "https://github.com/ashlesh-t/cognirepo/blob/main/docs/ARCHITECTURE.md"
Changelog = "https://github.com/ashlesh-t/cognirepo/blob/main/CHANGELOG.md"
Discord = "https://discord.com/channels/1488386981917360289/1488387271190380636"

[project.optional-dependencies]
languages = [
    "tree-sitter-python>=0.23",
    "tree-sitter-javascript>=0.23",
    "tree-sitter-typescript>=0.23",
    "tree-sitter-java>=0.23",
    "tree-sitter-cpp>=0.23",
    "tree-sitter-go>=0.23",
    "tree-sitter-rust>=0.23",
    "tree-sitter-bash>=0.23",
    "tree-sitter-yaml>=0.6",
]
cpp = [
    "pybind11>=2.12",
    "scikit-build-core>=0.9",
]
security = [
    "cryptography>=50.0.0",
    "keyring>=25.0",
]
cli = [
    "tqdm>=4.60",
]
providers = [
    # Model routing for `cognirepo ask`. Not required for MCP index server.
    # Install: pip install 'cognirepo[providers]'
    "anthropic>=0.87.0",
    "google-genai>=0.3",
    "openai>=1.0",
]
gpu = [
    # GPU-accelerated embeddings via sentence-transformers + PyTorch CUDA.
    # Install: pip install 'cognirepo[gpu]'
    # Then: pip install torch --index-url https://download.pytorch.org/whl/cu121
    "sentence-transformers==5.3.0",
    "torch>=2.0",
]
dev = [
    "pytest>=9.0.3",
    "pytest-asyncio>=0.23",
    "pytest-mock>=3.12",
    "pytest-cov>=5.0",
    "pytest-timeout>=2.3",
    "pytest-xdist>=3.5",
    "httpx>=0.28",
    "prometheus-client>=0.20",
    "build>=1.0",
    "bcrypt>=4.0",
    # Include providers so tests can import router/adapters without install hint
    "anthropic>=0.87.0",
    "google-genai>=0.3",
    "openai>=1.0",
]

[project.scripts]
cognirepo = "interface.cli.main:main"

[tool.setuptools.packages.find]
where = ["."]
include = [
    "cognirepo*",
    "core*", "data*", "intelligence*", "interface*", "ops*",
]
exclude = ["venv*", "*.egg-info*"]

[tool.setuptools.package-data]
# .env.example must live INSIDE the cognirepo/ package dir to ship in the
# wheel — package-data cannot include files at the repo root. The root copy
# exists for dev installs; tests/test_release_fixes.py asserts both stay in sync.
"cognirepo" = [".env.example"]

[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"

# ── optional C++ build ────────────────────────────────────────────────────────
# Activate by swapping [build-system] to:
#   requires = ["scikit-build-core>=0.9", "pybind11>=2.12"]
#   build-backend = "scikit_build_core.build"
# and running: pip install . --config-settings=cmake.args=-DBUILD_EXT=ON

[tool.pytest.ini_options]
testpaths = ["tests"]
asyncio_mode = "auto"
# -n 2: limit to 2 workers to prevent system lag on high-core systems.
# --dist worksteal: dynamic load balancing so slow tests don't bottleneck a worker.
# Override per-run: pytest -n0 for single-process debugging or pytest -n auto for max performance.
addopts = "-n 2 --dist worksteal"
filterwarnings = [
    "ignore::DeprecationWarning",
    "ignore::PendingDeprecationWarning",
]

[tool.coverage.run]
source = ["."]
omit = [
    "tests/*",
    "venv/*",
    ".venv/*",
    "scripts/*",
    "deploy/*",
    "docs/*",
    "*.egg-info/*",
    "setup.py",
    # Background / CLI-interactive / org-runtime modules with 0% pytest coverage.
    # These require live network, org setup, or interactive TTY — not unit-testable.
    "interface/cli/release_check.py",
    "interface/cli/wizard.py",
    "interface/cli/seed.py",
    "intelligence/indexer/doc_ingester.py",
    "intelligence/indexer/inter_repo_indexer.py",
    "data/memory/auto_store.py",
    "data/memory/cleanup_queue.py",
    "data/memory/project_memory.py",
    "interface/tools/behaviour_hook.py",
    "interface/tools/prime_session.py",
    "interface/tools/search_docs.py",
    "interface/tools/sync_claude_memory.py",
]

[tool.coverage.report]
exclude_lines = [
    "pragma: no cover",
    "def __repr__",
    "if __name__ == .__main__.:",
    "raise NotImplementedError",
    "if TYPE_CHECKING:",
    "except ImportError:",
]
fail_under = 50

[tool.pylint.messages_control]
disable = [
    # unresolvable without optional deps installed
    "import-error",
    "no-member",
    # subprocess check is handled by callers
    "subprocess-run-check",
    # too-few-public-methods is expected for middleware/stub/data classes
    "too-few-public-methods",
    # wrong-import-position is expected for guarded/lazy imports
    "wrong-import-position",
    # import-outside-toplevel is expected for optional/lazy imports throughout
    "import-outside-toplevel",
    # missing docstrings in tests and small helpers are fine
    "missing-function-docstring",
    "missing-class-docstring",
    "missing-module-docstring",
    # useless-object-inheritance: auto-generated proto files use `object`
    "useless-object-inheritance",
    # wrong-import-order: auto-generated proto files have non-standard ordering
    "wrong-import-order",
    # ungrouped-imports: minor style, not a bug
    "ungrouped-imports",
    # duplicate-code: informational only, not actionable in test infrastructure
    "duplicate-code",
]

[tool.pylint.design]
max-locals = 30
max-branches = 25
max-statements = 100
max-returns = 10
max-args = 12
max-positional-arguments = 12
max-attributes = 15