processing '/var/local/PKGS/CRAN/arrow' a directory * installing to library '/home/runner/R-patched/lib' * build_help_types= * DBG: 'R CMD INSTALL' now doing do_install() * created lock directory '/home/runner/R-patched/lib/00LOCK-arrow' * installing *source* package 'arrow' ... ** this is package 'arrow' version '22.0.0' ** package 'arrow' successfully unpacked and MD5 sums checked ** backing up earlier installation ** using staged installation configure command: 'ARROW_R_DEV=true ./configure ' *** pkg-config found. trying URL 'https://github.com/apache/arrow/releases' downloaded 421 KB *** Found local C++ source: 'tools/cpp' *** Building libarrow from source For build options and troubleshooting, see the install guide: https://arrow.apache.org/docs/r/articles/install.html *** Building with MAKEFLAGS=-j2 **** cmake 3.31.7: /usr/bin/cmake **** arrow with SOURCE_DIR='tools/cpp' BUILD_DIR='/home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb' DEST_DIR='libarrow/arrow-22.0.0' CMAKE='/usr/bin/cmake' EXTRA_CMAKE_FLAGS='' CC='gcc -std=gnu23' CXX='g++ -std=gnu++17' LDFLAGS='-L/usr/local/lib' N_JOBS='2' ARROW_S3='OFF' ARROW_GCS='OFF' ++ pwd + : /var/local/PKGS/CRAN/arrow + : tools/cpp + : /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb + : libarrow/arrow-22.0.0 + : /usr/bin/cmake ++ cd tools/cpp ++ pwd + SOURCE_DIR=/var/local/PKGS/CRAN/arrow/tools/cpp ++ mkdir -p libarrow/arrow-22.0.0 ++ cd libarrow/arrow-22.0.0 ++ pwd + DEST_DIR=/var/local/PKGS/CRAN/arrow/libarrow/arrow-22.0.0 + '[' 2 = '' ']' + '[' '' '!=' '' ']' + '[' '' = false ']' + ARROW_DEFAULT_PARAM=OFF + case "$CXX" in + mkdir -p /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb + pushd /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb ~/tmp/RtmpnLbLid/file5d686ddcdfcb /var/local/PKGS/CRAN/arrow + /usr/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_SNAPPY_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_ACERO=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=ON -DARROW_DEPENDENCY_SOURCE=AUTO -DAWSSDK_SOURCE= -DBoost_SOURCE= -Dlz4_SOURCE= -DARROW_FILESYSTEM=ON -DARROW_GCS=OFF -DARROW_JEMALLOC=OFF -DARROW_MIMALLOC=ON -DARROW_JSON=ON -DARROW_PARQUET=ON -DARROW_S3=OFF -DARROW_WITH_BROTLI=OFF -DARROW_WITH_BZ2=OFF -DARROW_WITH_LZ4=ON -DARROW_WITH_RE2=ON -DARROW_WITH_SNAPPY=ON -DARROW_WITH_UTF8PROC=ON -DARROW_WITH_ZLIB=OFF -DARROW_WITH_ZSTD=OFF -DARROW_VERBOSE_THIRDPARTY_BUILD=OFF -DCMAKE_BUILD_TYPE=Release -DCMAKE_FIND_DEBUG_MODE=OFF -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/var/local/PKGS/CRAN/arrow/libarrow/arrow-22.0.0 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=OFF -DOPENSSL_ROOT_DIR=/usr -Dre2_SOURCE=BUNDLED -Dxsimd_SOURCE= -Dzstd_SOURCE= -G 'Unix Makefiles' /var/local/PKGS/CRAN/arrow/tools/cpp -- Building using CMake version: 3.31.7 -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Arrow version: 22.0.0 (full: '22.0.0') -- Arrow SO version: 2200 (full: 2200.0.0) -- clang-tidy 14 not found -- clang-format 14 not found -- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN) -- infer not found -- Found Python3: /usr/bin/python3.12 (found version "3.12.12") found components: Interpreter fatal: not a git repository (or any of the parent directories): .git -- System processor: x86_64 -- Performing Test CXX_SUPPORTS_SSE4_2 -- Performing Test CXX_SUPPORTS_SSE4_2 - Success -- Performing Test CXX_SUPPORTS_AVX2 -- Performing Test CXX_SUPPORTS_AVX2 - Success -- Performing Test CXX_SUPPORTS_AVX512 -- Performing Test CXX_SUPPORTS_AVX512 - Success -- Arrow build warning level: PRODUCTION -- Using ld linker -- Build Type: Release -- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT -- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT - Success -- Using AUTO approach to find dependencies -- ARROW_ABSL_BUILD_VERSION: 20211102.0 -- ARROW_ABSL_BUILD_SHA256_CHECKSUM: dcf71b9cba8dc0ca9940c4b316a0c796be8fab42b070bb6b7cab62b48f0e66c4 -- ARROW_AWS_C_AUTH_BUILD_VERSION: v0.9.0 -- ARROW_AWS_C_AUTH_BUILD_SHA256_CHECKSUM: aa6e98864fefb95c249c100da4ae7aed36ba13a8a91415791ec6fad20bec0427 -- ARROW_AWS_C_CAL_BUILD_VERSION: v0.9.2 -- ARROW_AWS_C_CAL_BUILD_SHA256_CHECKSUM: f9f3bc6a069e2efe25fcdf73e4d2b16b5608c327d2eb57c8f7a8524e9e1fcad0 -- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.12.4 -- ARROW_AWS_C_COMMON_BUILD_SHA256_CHECKSUM: 0b7705a4d115663c3f485d353a75ed86e37583157585e5825d851af634b57fe3 -- ARROW_AWS_C_COMPRESSION_BUILD_VERSION: v0.3.1 -- ARROW_AWS_C_COMPRESSION_BUILD_SHA256_CHECKSUM: 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ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.2.7 -- ARROW_AWS_CHECKSUMS_BUILD_SHA256_CHECKSUM: 178e8398d98111f29150f7813a70c20ad97ab30be0de02525440355fe84ccb1d -- ARROW_AWS_CRT_CPP_BUILD_VERSION: v0.32.8 -- ARROW_AWS_CRT_CPP_BUILD_SHA256_CHECKSUM: db44260452a0296341fb8e7b987e4c328f08f7829b9f1c740fed9c963e081e93 -- ARROW_AWS_LC_BUILD_VERSION: v1.52.1 -- ARROW_AWS_LC_BUILD_SHA256_CHECKSUM: fe552e3c3522f73afc3c30011745c431c633f7b4e25dcd7b38325f194a7b3b75 -- ARROW_AWSSDK_BUILD_VERSION: 1.11.587 -- ARROW_AWSSDK_BUILD_SHA256_CHECKSUM: b9944ba9905a68d6e53abb4f36ab2b3bd18ac88d8571647bb9f2b8026b76f8cd -- ARROW_AZURE_SDK_BUILD_VERSION: azure-identity_1.9.0 -- ARROW_AZURE_SDK_BUILD_SHA256_CHECKSUM: 97065bfc971ac8df450853ce805f820f52b59457bd7556510186a1569502e4a1 -- ARROW_BOOST_BUILD_VERSION: 1.88.0 -- ARROW_BOOST_BUILD_SHA256_CHECKSUM: dcea50f40ba1ecfc448fdf886c0165cf3e525fef2c9e3e080b9804e8117b9694 -- ARROW_BROTLI_BUILD_VERSION: v1.0.9 -- ARROW_BROTLI_BUILD_SHA256_CHECKSUM: f9e8d81d0405ba66d181529af42a3354f838c939095ff99930da6aa9cdf6fe46 -- ARROW_BZIP2_BUILD_VERSION: 1.0.8 -- ARROW_BZIP2_BUILD_SHA256_CHECKSUM: ab5a03176ee106d3f0fa90e381da478ddae405918153cca248e682cd0c4a2269 -- ARROW_CARES_BUILD_VERSION: 1.17.2 -- ARROW_CARES_BUILD_SHA256_CHECKSUM: 4803c844ce20ce510ef0eb83f8ea41fa24ecaae9d280c468c582d2bb25b3913d -- ARROW_CRC32C_BUILD_VERSION: 1.1.2 -- ARROW_CRC32C_BUILD_SHA256_CHECKSUM: ac07840513072b7fcebda6e821068aa04889018f24e10e46181068fb214d7e56 -- ARROW_GBENCHMARK_BUILD_VERSION: v1.8.3 -- ARROW_GBENCHMARK_BUILD_SHA256_CHECKSUM: 6bc180a57d23d4d9515519f92b0c83d61b05b5bab188961f36ac7b06b0d9e9ce -- ARROW_GFLAGS_BUILD_VERSION: v2.2.2 -- ARROW_GFLAGS_BUILD_SHA256_CHECKSUM: 34af2f15cf7367513b352bdcd2493ab14ce43692d2dcd9dfc499492966c64dcf -- ARROW_GLOG_BUILD_VERSION: v0.5.0 -- ARROW_GLOG_BUILD_SHA256_CHECKSUM: eede71f28371bf39aa69b45de23b329d37214016e2055269b3b5e7cfd40b59f5 -- ARROW_GOOGLE_CLOUD_CPP_BUILD_VERSION: v2.22.0 -- ARROW_GOOGLE_CLOUD_CPP_BUILD_SHA256_CHECKSUM: 0c68782e57959c82e0c81def805c01460a042c1aae0c2feee905acaa2a2dc9bf -- ARROW_GRPC_BUILD_VERSION: v1.46.3 -- ARROW_GRPC_BUILD_SHA256_CHECKSUM: d6cbf22cb5007af71b61c6be316a79397469c58c82a942552a62e708bce60964 -- ARROW_GTEST_BUILD_VERSION: 1.16.0 -- ARROW_GTEST_BUILD_SHA256_CHECKSUM: 78c676fc63881529bf97bf9d45948d905a66833fbfa5318ea2cd7478cb98f399 -- ARROW_JEMALLOC_BUILD_VERSION: 5.3.0 -- ARROW_JEMALLOC_BUILD_SHA256_CHECKSUM: 2db82d1e7119df3e71b7640219b6dfe84789bc0537983c3b7ac4f7189aecfeaa -- ARROW_LZ4_BUILD_VERSION: v1.10.0 -- ARROW_LZ4_BUILD_SHA256_CHECKSUM: 537512904744b35e232912055ccf8ec66d768639ff3abe5788d90d792ec5f48b -- ARROW_MIMALLOC_BUILD_VERSION: v3.1.5 -- ARROW_MIMALLOC_BUILD_SHA256_CHECKSUM: 1c6949032069d5ebea438ec5cedd602d06f40a92ddf0f0d9dcff0993e5f6635c -- ARROW_NLOHMANN_JSON_BUILD_VERSION: v3.12.0 -- ARROW_NLOHMANN_JSON_BUILD_SHA256_CHECKSUM: 4b92eb0c06d10683f7447ce9406cb97cd4b453be18d7279320f7b2f025c10187 -- ARROW_OPENTELEMETRY_BUILD_VERSION: v1.21.0 -- ARROW_OPENTELEMETRY_BUILD_SHA256_CHECKSUM: 98e5546f577a11b52a57faed1f4cc60d8c1daa44760eba393f43eab5a8ec46a2 -- ARROW_OPENTELEMETRY_PROTO_BUILD_VERSION: v1.7.0 -- ARROW_OPENTELEMETRY_PROTO_BUILD_SHA256_CHECKSUM: 11330d850f5e24d34c4246bc8cb21fcd311e7565d219195713455a576bb11bed -- ARROW_ORC_BUILD_VERSION: 2.2.0 -- ARROW_ORC_BUILD_SHA256_CHECKSUM: b15aca45a7e73ffbd1bbc36a78cd1422d41f07721092a25f43448e6e16f4763b -- ARROW_PROTOBUF_BUILD_VERSION: v21.3 -- ARROW_PROTOBUF_BUILD_SHA256_CHECKSUM: 2f723218f6cb709ae4cdc4fb5ed56a5951fc5d466f0128ce4c946b8c78c8c49f -- ARROW_RAPIDJSON_BUILD_VERSION: 232389d4f1012dddec4ef84861face2d2ba85709 -- ARROW_RAPIDJSON_BUILD_SHA256_CHECKSUM: b9290a9a6d444c8e049bd589ab804e0ccf2b05dc5984a19ed5ae75d090064806 -- ARROW_RE2_BUILD_VERSION: 2022-06-01 -- ARROW_RE2_BUILD_SHA256_CHECKSUM: f89c61410a072e5cbcf8c27e3a778da7d6fd2f2b5b1445cd4f4508bee946ab0f -- ARROW_SNAPPY_BUILD_VERSION: 1.2.2 -- ARROW_SNAPPY_BUILD_SHA256_CHECKSUM: 90f74bc1fbf78a6c56b3c4a082a05103b3a56bb17bca1a27e052ea11723292dc -- ARROW_SUBSTRAIT_BUILD_VERSION: v0.44.0 -- ARROW_SUBSTRAIT_BUILD_SHA256_CHECKSUM: f989a862f694e7dbb695925ddb7c4ce06aa6c51aca945105c075139aed7e55a2 -- ARROW_S2N_TLS_BUILD_VERSION: v1.5.23 -- ARROW_S2N_TLS_BUILD_SHA256_CHECKSUM: 81961ea5ae9313c987edfa579306ad4500bedfbf10caf84d8a5dcfc42aaf591f -- ARROW_THRIFT_BUILD_VERSION: 0.22.0 -- ARROW_THRIFT_BUILD_SHA256_CHECKSUM: 794a0e455787960d9f27ab92c38e34da27e8deeda7a5db0e59dc64a00df8a1e5 -- ARROW_UTF8PROC_BUILD_VERSION: v2.10.0 -- ARROW_UTF8PROC_BUILD_SHA256_CHECKSUM: 6f4f1b639daa6dca9f80bc5db1233e9cbaa31a67790887106160b33ef743f136 -- ARROW_XSIMD_BUILD_VERSION: 13.0.0 -- ARROW_XSIMD_BUILD_SHA256_CHECKSUM: 8bdbbad0c3e7afa38d88d0d484d70a1671a1d8aefff03f4223ab2eb6a41110a3 -- ARROW_ZLIB_BUILD_VERSION: 1.3.1 -- ARROW_ZLIB_BUILD_SHA256_CHECKSUM: 9a93b2b7dfdac77ceba5a558a580e74667dd6fede4585b91eefb60f03b72df23 -- ARROW_ZSTD_BUILD_VERSION: 1.5.7 -- ARROW_ZSTD_BUILD_SHA256_CHECKSUM: eb33e51f49a15e023950cd7825ca74a4a2b43db8354825ac24fc1b7ee09e6fa3 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for _M_ARM64 -- Looking for _M_ARM64 - not found -- Looking for __SIZEOF_INT128__ -- Looking for __SIZEOF_INT128__ - found CMake Warning at cmake_modules/ThirdpartyToolchain.cmake:291 (find_package): By not providing "FindBoost.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "Boost", but CMake did not find one. Could not find a package configuration file provided by "Boost" (requested version 1.58) with any of the following names: BoostConfig.cmake boost-config.cmake Add the installation prefix of "Boost" to CMAKE_PREFIX_PATH or set "Boost_DIR" to a directory containing one of the above files. If "Boost" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:1282 (resolve_dependency) CMakeLists.txt:523 (include) -- Boost: Building from source -- Boost: Boost: Release build, static libraries, MPI OFF, Python OFF, testing OFF -- Boost: Boost: libraries included: algorithm;crc;numeric/conversion;scope_exit;throw_exception;tokenizer;locale;thread;uuid -- Boost: Performing Test BOOST_ATOMIC_TARGET_X86 -- Boost: Performing Test BOOST_ATOMIC_TARGET_X86 - Success -- Boost: Performing Test BOOST_ATOMIC_COMPILER_HAS_SSE2 -- Boost: Performing Test BOOST_ATOMIC_COMPILER_HAS_SSE2 - Success -- Boost: Performing Test BOOST_ATOMIC_COMPILER_HAS_SSE41 -- Boost: Performing Test BOOST_ATOMIC_COMPILER_HAS_SSE41 - Success -- Boost: Performing Test BOOST_CHARCONV_QUADMATH_FOUND -- Boost: Performing Test BOOST_CHARCONV_QUADMATH_FOUND - Failed -- Boost: Boost.Charconv: quadmath support OFF -- Boost: Performing Test Iconv_IS_BUILT_IN -- Boost: Performing Test Iconv_IS_BUILT_IN - Success -- Boost: Found Iconv: built in to C library -- Boost: Found ICU: /usr/include (found suitable version "76.1", minimum required is "4.8.1") found components: data i18n uc -- Boost: Boost.Locale: iconv ON, ICU ON, POSIX ON, std ON, winapi OFF -- Boost: Found ICU: /usr/include (found version "76.1") found components: data i18n uc -- Boost: Boost.Thread: threading API is pthread -- Boost include dir: $;$;$;$;$;$;$;$;$ CMake Warning at cmake_modules/FindSnappyAlt.cmake:41 (find_package): By not providing "FindSnappy.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "Snappy", but CMake did not find one. Could not find a package configuration file provided by "Snappy" with any of the following names: SnappyConfig.cmake snappy-config.cmake Add the installation prefix of "Snappy" to CMAKE_PREFIX_PATH or set "Snappy_DIR" to a directory containing one of the above files. If "Snappy" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:291 (find_package) cmake_modules/ThirdpartyToolchain.cmake:1444 (resolve_dependency) CMakeLists.txt:523 (include) -- Could NOT find SnappyAlt (missing: Snappy_LIB Snappy_INCLUDE_DIR) -- Building snappy from source -- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required. CMake Warning at cmake_modules/FindThriftAlt.cmake:42 (find_package): By not providing "FindThrift.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "Thrift", but CMake did not find one. Could not find a package configuration file provided by "Thrift" (requested version 0.11.0) with any of the following names: ThriftConfig.cmake thrift-config.cmake Add the installation prefix of "Thrift" to CMAKE_PREFIX_PATH or set "Thrift_DIR" to a directory containing one of the above files. If "Thrift" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:291 (find_package) cmake_modules/ThirdpartyToolchain.cmake:1840 (resolve_dependency) CMakeLists.txt:523 (include) -- Checking for module 'thrift' -- Package 'thrift' not found -- Could NOT find ThriftAlt: (Required is at least version "0.11.0") (found ThriftAlt_LIB-NOTFOUND) -- Thrift: Building from source -- Thrift: Configuring arrow 0.22.0 -- Thrift: libevent NOT found. -- Thrift: Found OpenSSL: /usr/lib/libcrypto.so (found version "3.5.4") CMake Warning (dev) at /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/DefineOptions.cmake:120 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/CMakeLists.txt:44 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/DefineOptions.cmake:121 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/CMakeLists.txt:44 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:441 (message): The package name passed to `find_package_handle_standard_args` (clang-tidy) does not match the name of the calling package (ClangTools). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/FindClangTools.cmake:16 (find_package_handle_standard_args) /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/StaticCodeAnalysis.cmake:1 (find_package) /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/CMakeLists.txt:51 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Thrift: Could NOT find clang-tidy (missing: clang-tidy_BINARY) CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:441 (message): The package name passed to `find_package_handle_standard_args` (clang-apply-replacements) does not match the name of the calling package (ClangTools). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/FindClangTools.cmake:16 (find_package_handle_standard_args) /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/StaticCodeAnalysis.cmake:1 (find_package) /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/CMakeLists.txt:51 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Thrift: Could NOT find clang-apply-replacements (missing: clang-apply-replacements_BINARY) CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:441 (message): The package name passed to `find_package_handle_standard_args` (run-clang-tidy) does not match the name of the calling package (ClangTools). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/FindClangTools.cmake:24 (find_package_handle_standard_args) /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/build/cmake/StaticCodeAnalysis.cmake:1 (find_package) /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/thrift-src/CMakeLists.txt:51 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Thrift: Could NOT find run-clang-tidy (missing: run-clang-tidy_BINARY) -- Thrift: Looking for arpa/inet.h -- Thrift: Looking for arpa/inet.h - found -- Thrift: Looking for fcntl.h -- Thrift: Looking for fcntl.h - found -- Thrift: Looking for getopt.h -- Thrift: Looking for getopt.h - found -- Thrift: Looking for inttypes.h -- Thrift: Looking for inttypes.h - found -- Thrift: Looking for netdb.h -- Thrift: Looking for netdb.h - found -- Thrift: Looking for netinet/in.h -- Thrift: Looking for netinet/in.h - found -- Thrift: Looking for signal.h -- Thrift: Looking for signal.h - found -- Thrift: Looking for stdint.h -- Thrift: Looking for stdint.h - found -- Thrift: Looking for unistd.h -- Thrift: Looking for unistd.h - found -- Thrift: Looking for pthread.h -- Thrift: Looking for pthread.h - found -- Thrift: Looking for sys/ioctl.h -- Thrift: Looking for sys/ioctl.h - found -- Thrift: Looking for sys/param.h -- Thrift: Looking for sys/param.h - found -- Thrift: Looking for sys/resource.h -- Thrift: Looking for sys/resource.h - found -- Thrift: Looking for sys/socket.h -- Thrift: Looking for sys/socket.h - found -- Thrift: Looking for sys/stat.h -- Thrift: Looking for sys/stat.h - found -- Thrift: Looking for sys/time.h -- Thrift: Looking for sys/time.h - found -- Thrift: Looking for sys/un.h -- Thrift: Looking for sys/un.h - found -- Thrift: Looking for poll.h -- Thrift: Looking for poll.h - found -- Thrift: Looking for sys/poll.h -- Thrift: Looking for sys/poll.h - found -- Thrift: Looking for sys/select.h -- Thrift: Looking for sys/select.h - found -- Thrift: Looking for sched.h -- Thrift: Looking for sched.h - found -- Thrift: Looking for string.h -- Thrift: Looking for string.h - found -- Thrift: Looking for strings.h -- Thrift: Looking for strings.h - found -- Thrift: Performing Test HAVE_AF_UNIX_H -- Thrift: Performing Test HAVE_AF_UNIX_H - Failed -- Thrift: Looking for gethostbyname -- Thrift: Looking for gethostbyname - found -- Thrift: Looking for gethostbyname_r -- Thrift: Looking for gethostbyname_r - found -- Thrift: Looking for strerror_r -- Thrift: Looking for strerror_r - found -- Thrift: Looking for sched_get_priority_max -- Thrift: Looking for sched_get_priority_max - found -- Thrift: Looking for sched_get_priority_min -- Thrift: Looking for sched_get_priority_min - found -- Thrift: Performing Test STRERROR_R_CHAR_P -- Thrift: Performing Test STRERROR_R_CHAR_P - Failed -- Thrift: Building without tests -- Thrift: ---------------------------------------------------------- -- Thrift: Thrift version: 0.22.0 (0.22.0) -- Thrift: Thrift package version: 0.22.0 -- Thrift: -- Thrift: Build configuration summary -- Thrift: Build compiler: OFF -- Thrift: Build libraries: ON -- Thrift: Build tests: OFF -- Thrift: - Disabled because BUILD_COMPILER=OFF and no valid THRIFT_COMPILER is given -- Thrift: Build type: Release -- Thrift: -- Thrift: Language libraries: -- Thrift: -- Thrift: Build as3 library: OFF -- Thrift: - Disabled by WITH_AS3=OFF -- Thrift: - Adobe Flex compc was not found - did you set env var FLEX_HOME? -- Thrift: -- Thrift: Build with OpenSSL: ON -- Thrift: Version: 3.5.4 -- Thrift: -- Thrift: Build C++ library: ON -- Thrift: C++ Language Level: C++17 [compiler must support it] -- Thrift: Build shared libraries: OFF -- Thrift: Build with libevent support: OFF -- Thrift: Build with Qt5 support: OFF -- Thrift: Build with ZLIB support: OFF -- Thrift: -- Thrift: Build C (GLib) library: OFF -- Thrift: - Disabled by WITH_C_GLIB=OFF -- Thrift: - GLib missing -- Thrift: -- Thrift: Build Java library: OFF -- Thrift: - Disabled by WITH_JAVA=OFF -- Thrift: - Gradle missing -- Thrift: Build Javascript library: OFF -- Thrift: - Disabled by WITH_JAVASCRIPT=OFF -- Thrift: Build NodeJS library: OFF -- Thrift: - Disabled by WITH_NODEJS=OFF -- Thrift: -- Thrift: Build Python library: OFF -- Thrift: - Disabled by WITH_PYTHON=OFF -- Thrift: - Python libraries missing -- Thrift: -- Thrift: -- Thrift: ---------------------------------------------------------- -- Building (vendored) mimalloc from source CMake Warning at cmake_modules/FindRapidJSONAlt.cmake:29 (find_package): By not providing "FindRapidJSON.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "RapidJSON", but CMake did not find one. Could not find a package configuration file provided by "RapidJSON" (requested version 1.1.0) with any of the following names: RapidJSONConfig.cmake rapidjson-config.cmake Add the installation prefix of "RapidJSON" to CMAKE_PREFIX_PATH or set "RapidJSON_DIR" to a directory containing one of the above files. If "RapidJSON" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:291 (find_package) cmake_modules/ThirdpartyToolchain.cmake:2550 (resolve_dependency) CMakeLists.txt:523 (include) -- Could NOT find RapidJSONAlt (missing: RAPIDJSON_INCLUDE_DIR) (Required is at least version "1.1.0") -- Building RapidJSON from source CMake Warning at cmake_modules/ThirdpartyToolchain.cmake:291 (find_package): By not providing "Findxsimd.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "xsimd", but CMake did not find one. Could not find a package configuration file provided by "xsimd" with any of the following names: xsimdConfig.cmake xsimd-config.cmake Add the installation prefix of "xsimd" to CMAKE_PREFIX_PATH or set "xsimd_DIR" to a directory containing one of the above files. If "xsimd" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:2590 (resolve_dependency) CMakeLists.txt:523 (include) -- Building xsimd from source -- Found ZLIB: /usr/lib/libz.so (found version "1.3.1") -- Using pkg-config package for zlib that is used by arrow for static link CMake Warning at cmake_modules/Findlz4Alt.cmake:29 (find_package): By not providing "Findlz4.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "lz4", but CMake did not find one. Could not find a package configuration file provided by "lz4" with any of the following names: lz4Config.cmake lz4-config.cmake Add the installation prefix of "lz4" to CMAKE_PREFIX_PATH or set "lz4_DIR" to a directory containing one of the above files. If "lz4" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:291 (find_package) cmake_modules/ThirdpartyToolchain.cmake:2710 (resolve_dependency) CMakeLists.txt:523 (include) -- Checking for module 'liblz4' -- Package 'liblz4' not found -- Could NOT find lz4Alt (missing: LZ4_LIB LZ4_INCLUDE_DIR) -- Building LZ4 from source using FetchContent CMake Deprecation Warning at /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/_deps/lz4-src/build/cmake/CMakeLists.txt:11 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Creating build script for LZ4 version: 1.10.0 -- Performing Test CFLAG_pedantic_errors -- Performing Test CFLAG_pedantic_errors - Success -- Performing Test CFLAG_Wall -- Performing Test CFLAG_Wall - Success -- Performing Test CFLAG_Wextra -- Performing Test CFLAG_Wextra - Success -- Performing Test CFLAG_Wundef -- Performing Test CFLAG_Wundef - Success -- Performing Test CFLAG_Wcast_qual -- Performing Test CFLAG_Wcast_qual - Success -- Performing Test CFLAG_Wcast_align -- Performing Test CFLAG_Wcast_align - Success -- Performing Test CFLAG_Wshadow -- Performing Test CFLAG_Wshadow - Success -- Performing Test CFLAG_Wswitch_enum -- Performing Test CFLAG_Wswitch_enum - Success -- Performing Test CFLAG_Wdeclaration_after_statement -- Performing Test CFLAG_Wdeclaration_after_statement - Success -- Performing Test CFLAG_Wstrict_prototypes -- Performing Test CFLAG_Wstrict_prototypes - Success -- Performing Test CFLAG_Wpointer_arith -- Performing Test CFLAG_Wpointer_arith - Success -- Building RE2 from source -- Could NOT find utf8proc: (Required is at least version "2.2.0") (found utf8proc_LIB-NOTFOUND) -- Building utf8proc from source -- Found hdfs.h at: /var/local/PKGS/CRAN/arrow/tools/cpp/thirdparty/hadoop/include/hdfs.h -- All bundled static libraries: Snappy::snappy-static;thrift;mimalloc::mimalloc;lz4_static;re2::re2;utf8proc::utf8proc -- CMAKE_C_FLAGS: -O2 -mtune=native -Wall -fno-semantic-interposition -msse4.2 -- CMAKE_CXX_FLAGS: -Wno-noexcept-type -Wno-self-move -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0 -fdiagnostics-color=always -Wall -fno-semantic-interposition -msse4.2 -- CMAKE_C_FLAGS_RELEASE: -O3 -DNDEBUG -O2 -ftree-vectorize -- CMAKE_CXX_FLAGS_RELEASE: -O3 -DNDEBUG -O2 -ftree-vectorize -- Creating bundled static library target arrow_bundled_dependencies at /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/release/libarrow_bundled_dependencies.a -- Looking for backtrace -- Looking for backtrace - not found -- Could NOT find Backtrace (missing: Backtrace_LIBRARY Backtrace_INCLUDE_DIR) -- --------------------------------------------------------------------- -- Arrow version: 22.0.0 -- -- Build configuration summary: -- Generator: Unix Makefiles -- Build type: Release -- Source directory: /var/local/PKGS/CRAN/arrow/tools/cpp -- Install prefix: /var/local/PKGS/CRAN/arrow/libarrow/arrow-22.0.0 -- -- Compile and link options: -- -- ARROW_CXXFLAGS="" [default=""] -- Compiler flags to append when compiling Arrow -- ARROW_BUILD_STATIC=ON [default=ON] -- Build static libraries -- ARROW_BUILD_SHARED=OFF [default=ON] -- Build shared libraries -- ARROW_PACKAGE_KIND="" [default=""] -- Arbitrary string that identifies the kind of package -- (for informational purposes) -- ARROW_GIT_ID="" [default=""] -- The Arrow git commit id (if any) -- ARROW_GIT_DESCRIPTION="" [default=""] -- The Arrow git commit description (if any) -- ARROW_POSITION_INDEPENDENT_CODE=ON [default=ON] -- Whether to create position-independent target -- ARROW_USE_CCACHE=ON [default=ON] -- Use ccache when compiling (if available) -- ARROW_USE_SCCACHE=ON [default=ON] -- Use sccache when compiling (if available), -- takes precedence over ccache if a storage backend is configured -- ARROW_USE_LD_GOLD=OFF [default=OFF] -- Use ld.gold for linking on Linux (if available) -- ARROW_USE_LLD=OFF [default=OFF] -- Use the LLVM lld for linking (if available) -- ARROW_USE_MOLD=OFF [default=OFF] -- Use mold for linking on Linux (if available) -- ARROW_SIMD_LEVEL=SSE4_2 [default=DEFAULT|NONE|SSE4_2|AVX2|AVX512|NEON|SVE|SVE128|SVE256|SVE512] -- Compile-time SIMD optimization level -- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=MAX|NONE|SSE4_2|AVX2|AVX512] -- Max runtime SIMD optimization level -- ARROW_ALTIVEC=ON [default=ON] -- Build with Altivec if compiler has support -- ARROW_RPATH_ORIGIN=OFF [default=OFF] -- Build Arrow libraries with RATH set to $ORIGIN -- ARROW_INSTALL_NAME_RPATH=ON [default=ON] -- Build Arrow libraries with install_name set to @rpath -- ARROW_GGDB_DEBUG=ON [default=ON] -- Pass -ggdb flag to debug builds -- ARROW_WITH_MUSL=OFF [default=OFF] -- Whether the system libc is musl or not -- ARROW_ENABLE_THREADING=ON [default=ON] -- Enable threading in Arrow core -- -- Tests and benchmarks options: -- -- ARROW_BUILD_EXAMPLES=OFF [default=OFF] -- Build the Arrow examples -- ARROW_BUILD_TESTS=OFF [default=OFF] -- Build the Arrow googletest unit tests -- ARROW_ENABLE_TIMING_TESTS=ON [default=ON] -- Enable timing-sensitive tests -- ARROW_BUILD_INTEGRATION=OFF [default=OFF] -- Build the Arrow integration test executables -- ARROW_BUILD_BENCHMARKS=OFF [default=OFF] -- Build the Arrow micro benchmarks -- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF] -- Build the Arrow micro reference benchmarks -- ARROW_BUILD_DETAILED_BENCHMARKS=OFF [default=OFF] -- Build benchmarks that do a longer exploration of performance -- ARROW_TEST_LINKAGE=static [default=static|shared] -- Linkage of Arrow libraries with unit tests executables. -- ARROW_BUILD_FUZZING_UTILITIES=OFF [default=OFF] -- Build command line utilities for fuzzing -- ARROW_FUZZING=OFF [default=OFF] -- Build Arrow fuzz targets -- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF] -- Enable unit tests which use large memory -- -- Coverage options: -- -- ARROW_GENERATE_COVERAGE=OFF [default=OFF] -- Build with C++ code coverage enabled -- -- Checks options: -- -- ARROW_TEST_MEMCHECK=OFF [default=OFF] -- Run the test suite using valgrind --tool=memcheck -- ARROW_USE_ASAN=OFF [default=OFF] -- Enable Address Sanitizer checks -- ARROW_USE_TSAN=OFF [default=OFF] -- Enable Thread Sanitizer checks -- ARROW_USE_UBSAN=OFF [default=OFF] -- Enable Undefined Behavior sanitizer checks -- -- Project component options: -- -- ARROW_ACERO=ON [default=OFF] -- Build the Arrow Acero Engine Module -- ARROW_AZURE=OFF [default=OFF] -- Build Arrow with Azure support (requires the Azure SDK for C++) -- ARROW_BUILD_UTILITIES=OFF [default=OFF] -- Build Arrow command line utilities -- ARROW_COMPUTE=ON [default=OFF] -- Build all Arrow Compute kernels -- ARROW_CSV=ON [default=OFF] -- Build the Arrow CSV Parser Module -- ARROW_CUDA=OFF [default=OFF] -- Build the Arrow CUDA extensions (requires CUDA toolkit) -- ARROW_DATASET=ON [default=OFF] -- Build the Arrow Dataset Modules -- ARROW_FILESYSTEM=ON [default=OFF] -- Build the Arrow Filesystem Layer -- ARROW_FLIGHT=OFF [default=OFF] -- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers) -- ARROW_FLIGHT_SQL=OFF [default=OFF] -- Build the Arrow Flight SQL extension -- ARROW_FLIGHT_SQL_ODBC=OFF [default=OFF] -- Build the Arrow Flight SQL ODBC extension -- ARROW_GANDIVA=OFF [default=OFF] -- Build the Gandiva libraries -- ARROW_GCS=OFF [default=C++ Client Libraries)] -- Build Arrow with GCS support (requires the Google Cloud Platform -- ARROW_HDFS=OFF [default=OFF] -- Build the Arrow HDFS bridge -- ARROW_IPC=ON [default=ON] -- Build the Arrow IPC extensions -- ARROW_JEMALLOC=OFF [default=OFF] -- Build the Arrow jemalloc-based allocator -- ARROW_JSON=ON [default=OFF] -- Build Arrow with JSON support (requires RapidJSON) -- ARROW_MIMALLOC=ON [default=ON] -- Build the Arrow mimalloc-based allocator -- ARROW_PARQUET=ON [default=OFF] -- Build the Parquet libraries -- ARROW_ORC=OFF [default=OFF] -- Build the Arrow ORC adapter -- ARROW_PYTHON=OFF [default=OFF] -- Build some components needed by PyArrow. -- (This is a deprecated option. Use CMake presets instead.) -- ARROW_S3=OFF [default=OFF] -- Build Arrow with S3 support (requires the AWS SDK for C++) -- ARROW_S3_MODULE=OFF [default=OFF] -- Build the Arrow S3 filesystem as a dynamic module -- ARROW_SUBSTRAIT=OFF [default=OFF] -- Build the Arrow Substrait Consumer Module -- ARROW_TENSORFLOW=OFF [default=OFF] -- Build Arrow with TensorFlow support enabled -- ARROW_TESTING=OFF [default=OFF] -- Build the Arrow testing libraries -- -- Thirdparty toolchain options: -- -- ARROW_DEPENDENCY_SOURCE=AUTO [default=AUTO|BUNDLED|SYSTEM|CONDA|VCPKG|BREW] -- Method to use for acquiring arrow's build dependencies -- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF] -- Show output from ExternalProjects rather than just logging to files -- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON] -- Link to shared libraries -- ARROW_BOOST_USE_SHARED=OFF [default=ON] -- Rely on Boost shared libraries where relevant -- ARROW_BROTLI_USE_SHARED=ON [default=ON] -- Rely on Brotli shared libraries where relevant -- ARROW_BZ2_USE_SHARED=ON [default=ON] -- Rely on Bz2 shared libraries where relevant -- ARROW_GFLAGS_USE_SHARED=ON [default=ON] -- Rely on GFlags shared libraries where relevant -- ARROW_GRPC_USE_SHARED=ON [default=ON] -- Rely on gRPC shared libraries where relevant -- ARROW_JEMALLOC_USE_SHARED=ON [default=ON] -- Rely on jemalloc shared libraries where relevant -- ARROW_LLVM_USE_SHARED=ON [default=ON] -- Rely on LLVM shared libraries where relevant -- ARROW_LZ4_USE_SHARED=ON [default=ON] -- Rely on lz4 shared libraries where relevant -- ARROW_OPENSSL_USE_SHARED=ON [default=ON] -- Rely on OpenSSL shared libraries where relevant -- ARROW_PROTOBUF_USE_SHARED=ON [default=ON] -- Rely on Protocol Buffers shared libraries where relevant -- ARROW_SNAPPY_USE_SHARED=OFF [default=ON] -- Rely on snappy shared libraries where relevant -- ARROW_THRIFT_USE_SHARED=ON [default=ON] -- Rely on thrift shared libraries where relevant -- ARROW_UTF8PROC_USE_SHARED=ON [default=ON] -- Rely on utf8proc shared libraries where relevant -- ARROW_ZSTD_USE_SHARED=ON [default=ON] -- Rely on zstd shared libraries where relevant -- ARROW_USE_GLOG=OFF [default=OFF] -- Build libraries with glog support for pluggable logging -- ARROW_WITH_BACKTRACE=ON [default=ON] -- Build with backtrace support -- ARROW_WITH_OPENTELEMETRY=OFF [default=OFF] -- Build libraries with OpenTelemetry support for distributed tracing -- ARROW_WITH_BROTLI=OFF [default=OFF] -- Build with Brotli compression -- ARROW_WITH_BZ2=OFF [default=OFF] -- Build with BZ2 compression -- ARROW_WITH_LZ4=ON [default=OFF] -- Build with lz4 compression -- ARROW_WITH_SNAPPY=ON [default=OFF] -- Build with Snappy compression -- ARROW_WITH_ZLIB=ON [default=OFF] -- Build with zlib compression -- ARROW_WITH_ZSTD=OFF [default=OFF] -- Build with zstd compression -- ARROW_WITH_UTF8PROC=ON [default=ON] -- Build with support for Unicode properties using the utf8proc library -- (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON) -- ARROW_WITH_RE2=ON [default=ON] -- Build with support for regular expressions using the re2 library -- (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON) -- -- Parquet options: -- -- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF] -- Build the Parquet executable CLI tools. Requires static libraries to be built. -- PARQUET_BUILD_EXAMPLES=OFF [default=OFF] -- Build the Parquet examples. Requires static libraries to be built. -- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF] -- Build support for encryption. Fail if OpenSSL is not found -- -- Gandiva options: -- -- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF] -- Include -static-libstdc++ -static-libgcc when linking with -- Gandiva static libraries -- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""] -- Compiler flags to append when pre-compiling Gandiva operations -- -- Cross compiling options: -- -- ARROW_GRPC_CPP_PLUGIN="" [default=""] -- grpc_cpp_plugin path to be used -- -- Advanced developer options: -- -- ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF] -- Compile with extra error context (line numbers, code) -- ARROW_OPTIONAL_INSTALL=OFF [default=OFF] -- If enabled install ONLY targets that have already been built. Please be -- advised that if this is enabled 'install' will fail silently on components -- that have not been built -- ARROW_GDB_INSTALL_DIR="" [default=""] -- Use a custom install directory for GDB plugin. -- In general, you don't need to specify this because the default -- (CMAKE_INSTALL_FULL_BINDIR on Windows, CMAKE_INSTALL_FULL_LIBDIR otherwise) -- is reasonable. -- Outputting build configuration summary to /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/cmake_summary.json -- Configuring done (26.1s) -- Generating done (0.4s) -- Build files have been written to: /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb + /usr/bin/cmake --build . --target install -- -j 2 gmake[1]: Entering directory '/home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb' [ 0%] Creating directories for 'snappy_ep' [ 0%] Creating directories for 'mimalloc_ep' [ 0%] Performing download step (download, verify and extract) for 'snappy_ep' [ 0%] Performing download step (download, verify and extract) for 'mimalloc_ep' -- snappy_ep download command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-download-*.log [ 0%] No update step for 'snappy_ep' [ 1%] No patch step for 'snappy_ep' [ 1%] Performing configure step for 'snappy_ep' -- mimalloc_ep download command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-download-*.log [ 2%] No update step for 'mimalloc_ep' [ 2%] No patch step for 'mimalloc_ep' [ 3%] Performing configure step for 'mimalloc_ep' -- mimalloc_ep configure command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-configure-*.log [ 3%] Performing build step for 'mimalloc_ep' -- snappy_ep configure command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-configure-*.log [ 4%] Performing build step for 'snappy_ep' -- snappy_ep build command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-build-*.log [ 4%] Performing install step for 'snappy_ep' -- snappy_ep install command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-install-*.log [ 4%] Completed 'snappy_ep' [ 4%] Built target snappy_ep [ 4%] Creating directories for 'rapidjson_ep' [ 4%] Performing download step (download, verify and extract) for 'rapidjson_ep' -- rapidjson_ep download command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/rapidjson_ep-stamp/rapidjson_ep-download-*.log [ 5%] No update step for 'rapidjson_ep' [ 5%] No patch step for 'rapidjson_ep' [ 6%] Performing configure step for 'rapidjson_ep' -- rapidjson_ep configure command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/rapidjson_ep-stamp/rapidjson_ep-configure-*.log [ 6%] Performing build step for 'rapidjson_ep' -- rapidjson_ep build command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/rapidjson_ep-stamp/rapidjson_ep-build-*.log [ 6%] Performing install step for 'rapidjson_ep' -- rapidjson_ep install command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/rapidjson_ep-stamp/rapidjson_ep-install-*.log [ 6%] Completed 'rapidjson_ep' [ 6%] Built target rapidjson_ep [ 6%] Creating directories for 'xsimd_ep' [ 6%] Performing download step (download, verify and extract) for 'xsimd_ep' -- xsimd_ep download command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/xsimd_ep-stamp/xsimd_ep-download-*.log [ 7%] No update step for 'xsimd_ep' [ 7%] No patch step for 'xsimd_ep' [ 8%] Performing configure step for 'xsimd_ep' -- xsimd_ep configure command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/xsimd_ep-stamp/xsimd_ep-configure-*.log [ 8%] Performing build step for 'xsimd_ep' -- xsimd_ep build command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/xsimd_ep-stamp/xsimd_ep-build-*.log [ 8%] Performing install step for 'xsimd_ep' -- xsimd_ep install command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/src/xsimd_ep-stamp/xsimd_ep-install-*.log [ 8%] Completed 'xsimd_ep' [ 8%] Built target xsimd_ep [ 8%] Creating directories for 're2_ep' [ 8%] Performing download step (download, verify and extract) for 're2_ep' -- re2_ep download command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep-stamp/re2_ep-download-*.log [ 8%] No update step for 're2_ep' [ 8%] No patch step for 're2_ep' [ 8%] Performing configure step for 're2_ep' -- re2_ep configure command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep-stamp/re2_ep-configure-*.log [ 8%] Performing build step for 're2_ep' -- mimalloc_ep build command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-build-*.log [ 8%] Performing install step for 'mimalloc_ep' -- mimalloc_ep install command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-install-*.log [ 8%] Completed 'mimalloc_ep' [ 8%] Built target mimalloc_ep [ 9%] Creating directories for 'utf8proc_ep' [ 9%] Performing download step (download, verify and extract) for 'utf8proc_ep' -- utf8proc_ep download command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-download-*.log [ 9%] No update step for 'utf8proc_ep' [ 9%] No patch step for 'utf8proc_ep' [ 9%] Performing configure step for 'utf8proc_ep' -- utf8proc_ep configure command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-configure-*.log [ 9%] Performing build step for 'utf8proc_ep' -- utf8proc_ep build command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-build-*.log [ 9%] Performing install step for 'utf8proc_ep' -- utf8proc_ep install command succeeded. See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-install-*.log [ 10%] Completed 'utf8proc_ep' [ 10%] Built target utf8proc_ep [ 10%] Building C object _deps/lz4-build/CMakeFiles/lz4_static.dir/__/lz4-src/lib/lz4.c.o [ 10%] Building C object _deps/lz4-build/CMakeFiles/lz4_static.dir/__/lz4-src/lib/lz4file.c.o [ 10%] Building C object _deps/lz4-build/CMakeFiles/lz4_static.dir/__/lz4-src/lib/lz4frame.c.o [ 11%] Building C object _deps/lz4-build/CMakeFiles/lz4_static.dir/__/lz4-src/lib/lz4hc.c.o [ 11%] Building C object _deps/lz4-build/CMakeFiles/lz4_static.dir/__/lz4-src/lib/xxhash.c.o [ 11%] Linking C static library liblz4.a [ 11%] Built target lz4_static [ 11%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/array_base.cc.o [ 11%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/array_binary.cc.o [ 11%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/array_decimal.cc.o [ 12%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/array_dict.cc.o CMake Error at /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-Release.cmake:37 (message): Command failed: 2 'make' See also /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-*.log -- stdout output is: [ 1%] Building CXX object CMakeFiles/re2.dir/re2/bitstate.cc.o [ 2%] Building CXX object CMakeFiles/re2.dir/re2/compile.cc.o [ 3%] Building CXX object CMakeFiles/re2.dir/re2/dfa.cc.o [ 4%] Building CXX object CMakeFiles/re2.dir/re2/filtered_re2.cc.o [ 5%] Building CXX object CMakeFiles/re2.dir/re2/mimics_pcre.cc.o [ 6%] Building CXX object CMakeFiles/re2.dir/re2/nfa.cc.o [ 7%] Building CXX object CMakeFiles/re2.dir/re2/onepass.cc.o [ 8%] Building CXX object CMakeFiles/re2.dir/re2/parse.cc.o [ 9%] Building CXX object CMakeFiles/re2.dir/re2/perl_groups.cc.o [ 10%] Building CXX object CMakeFiles/re2.dir/re2/prefilter.cc.o [ 11%] Building CXX object CMakeFiles/re2.dir/re2/prefilter_tree.cc.o [ 12%] Building CXX object CMakeFiles/re2.dir/re2/prog.cc.o [ 13%] Building CXX object CMakeFiles/re2.dir/re2/re2.cc.o [ 14%] Building CXX object CMakeFiles/re2.dir/re2/regexp.cc.o [ 15%] Building CXX object CMakeFiles/re2.dir/re2/set.cc.o [ 16%] Building CXX object CMakeFiles/re2.dir/re2/simplify.cc.o [ 17%] Building CXX object CMakeFiles/re2.dir/re2/stringpiece.cc.o [ 18%] Building CXX object CMakeFiles/re2.dir/re2/tostring.cc.o [ 20%] Building CXX object CMakeFiles/re2.dir/re2/unicode_casefold.cc.o [ 21%] Building CXX object CMakeFiles/re2.dir/re2/unicode_groups.cc.o [ 22%] Building CXX object CMakeFiles/re2.dir/util/rune.cc.o [ 23%] Building CXX object CMakeFiles/re2.dir/util/strutil.cc.o [ 24%] Linking CXX static library libre2.a [ 24%] Built target re2 [ 25%] Building CXX object CMakeFiles/testing.dir/re2/testing/backtrack.cc.o [ 26%] Building CXX object CMakeFiles/testing.dir/re2/testing/dump.cc.o [ 27%] Building CXX object CMakeFiles/testing.dir/re2/testing/exhaustive_tester.cc.o [ 28%] Building CXX object CMakeFiles/testing.dir/re2/testing/null_walker.cc.o [ 29%] Building CXX object CMakeFiles/testing.dir/re2/testing/regexp_generator.cc.o [ 30%] Building CXX object CMakeFiles/testing.dir/re2/testing/string_generator.cc.o [ 31%] Building CXX object CMakeFiles/testing.dir/re2/testing/tester.cc.o [ 32%] Building CXX object CMakeFiles/testing.dir/util/pcre.cc.o -- stderr output is: In file included from /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc:21: /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.h:503:11: error: 'int32_t' does not name a type 503 | mutable int32_t hit_limit_; // Hit limit during execution (bool) | ^~~~~~~ /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.h:166:1: note: 'int32_t' is defined in header ''; this is probably fixable by adding '#include ' 165 | #include "re2/stringpiece.h" +++ |+#include  166 | /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc: In member function 'void re2::PCRE::Init(const char*, Option, int, int, bool)': /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc:109:3: error: 'hit_limit_' was not declared in this scope; did you mean 'HitLimit'? 109 | hit_limit_ = false; | ^~~~~~~~~~ | HitLimit /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc: In member function 'bool re2::PCRE::HitLimit()': /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc:504:10: error: 'hit_limit_' was not declared in this scope; did you mean 'HitLimit'? 504 | return hit_limit_ != 0; | ^~~~~~~~~~ | HitLimit /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc: In member function 'void re2::PCRE::ClearHitLimit()': /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc:508:3: error: 'hit_limit_' was not declared in this scope; did you mean 'HitLimit'? 508 | hit_limit_ = 0; | ^~~~~~~~~~ | HitLimit /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc: In member function 'int re2::PCRE::TryMatch(const re2::StringPiece&, size_t, Anchor, bool, int*, int) const': /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep/util/pcre.cc:573:9: error: 'hit_limit_' was not declared in this scope; did you mean 'HitLimit'? 573 | hit_limit_ = true; | ^~~~~~~~~~ | HitLimit make[6]: *** [CMakeFiles/testing.dir/build.make:177: CMakeFiles/testing.dir/util/pcre.cc.o] Error 1 make[5]: *** [CMakeFiles/Makefile2:185: CMakeFiles/testing.dir/all] Error 2 make[4]: *** [Makefile:136: all] Error 2 CMake Error at /home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-Release.cmake:47 (message): Stopping after outputting logs. make[3]: *** [CMakeFiles/re2_ep.dir/build.make:86: re2_ep-prefix/src/re2_ep-stamp/re2_ep-build] Error 1 make[2]: *** [CMakeFiles/Makefile2:2297: CMakeFiles/re2_ep.dir/all] Error 2 make[2]: *** Waiting for unfinished jobs.... [ 12%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/array_nested.cc.o [ 12%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/array_primitive.cc.o [ 12%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/array_run_end.cc.o [ 12%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_adaptive.cc.o [ 13%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_base.cc.o [ 13%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_binary.cc.o [ 13%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_decimal.cc.o [ 13%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_dict.cc.o [ 13%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_run_end.cc.o [ 14%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_nested.cc.o [ 14%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_primitive.cc.o [ 14%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/builder_union.cc.o [ 14%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/concatenate.cc.o [ 14%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/data.cc.o [ 15%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/diff.cc.o [ 15%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/statistics.cc.o [ 15%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/util.cc.o [ 15%] Building CXX object src/arrow/CMakeFiles/arrow_array.dir/array/validate.cc.o [ 15%] Built target arrow_array gmake[1]: *** [Makefile:166: all] Error 2 gmake[1]: Leaving directory '/home/runner/tmp/RtmpnLbLid/file5d686ddcdfcb' **** Error building Arrow C++. *** Failed to find Arrow C++ libraries. ------------------------- NOTE --------------------------- There was an issue preparing the Arrow C++ libraries. See https://arrow.apache.org/docs/r/articles/install.html ---------------------------------------------------------- Test compile error: :1:10: fatal error: arrow/api.h: No such file or directory compilation terminated. Failing compile command: g++ -E -I/usr/local/include -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0 -std=gnu++17 -xc++ - PKG_CFLAGS= PKG_LIBS= ERROR: configuration failed for package 'arrow' * removing '/home/runner/R-patched/lib/arrow' * restoring previous '/home/runner/R-patched/lib/arrow'