* installing to library '/home/runner/R-patched/lib'
* installing *source* package 'junctions' ...
** this is package 'junctions' version '2.1.3'
** package 'junctions' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++ (Alpine 14.2.0) 14.2.0'
using C++17
make[1]: Entering directory '/var/local/PKGS/CRAN/junctions/src'
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG  -I'/home/runner/R-patched/lib/nloptr/include' -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/RcppParallel/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -D__MUSL__   -c Fish.cpp -o Fish.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG  -I'/home/runner/R-patched/lib/nloptr/include' -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/RcppParallel/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -D__MUSL__   -c Output.cpp -o Output.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG  -I'/home/runner/R-patched/lib/nloptr/include' -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/RcppParallel/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -D__MUSL__   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG  -I'/home/runner/R-patched/lib/nloptr/include' -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/RcppParallel/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -D__MUSL__   -c backcrossing.cpp -o backcrossing.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG  -I'/home/runner/R-patched/lib/nloptr/include' -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/RcppParallel/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -D__MUSL__   -c estimate_time_unphased.cpp -o estimate_time_unphased.o
In file included from estimate_time_unphased.cpp:26:
util.h: In function 'size_t get_rcpp_num_threads()':
util.h:20:9: error: 'tbb' has not been declared
   20 |       ? tbb::task_arena::automatic  // -1
      |         ^~~
util.h: In function 'void set_num_threads()':
util.h:27:7: error: 'tbb' has not been declared
   27 |       tbb::global_control(tbb::global_control::max_allowed_parallelism,
      |       ^~~
util.h:27:27: error: 'tbb' has not been declared
   27 |       tbb::global_control(tbb::global_control::max_allowed_parallelism,
      |                           ^~~
estimate_time_unphased.cpp: In member function 'double chromosome::calculate_likelihood(double, int, double) const':
estimate_time_unphased.cpp:542:5: error: 'tbb' has not been declared
  542 |     tbb::parallel_for(
      |     ^~~
estimate_time_unphased.cpp:543:7: error: 'tbb' has not been declared
  543 |       tbb::blocked_range<unsigned>(1, distances.size()),
      |       ^~~
estimate_time_unphased.cpp:543:26: error: expected primary-expression before 'unsigned'
  543 |       tbb::blocked_range<unsigned>(1, distances.size()),
      |                          ^~~~~~~~
estimate_time_unphased.cpp:544:17: error: 'tbb' does not name a type
  544 |       [&](const tbb::blocked_range<unsigned>& r) {
      |                 ^~~
estimate_time_unphased.cpp: In lambda function:
estimate_time_unphased.cpp:552:9: error: expected '{' before ';' token
  552 |       });
      |         ^
estimate_time_unphased.cpp: In member function 'double chromosome::calculate_likelihood(double, int, double) const':
estimate_time_unphased.cpp:552:9: error: expected ')' before ';' token
  552 |       });
      |         ^
      |         )
estimate_time_unphased.cpp:542:22: note: to match this '('
  542 |     tbb::parallel_for(
      |                      ^
make[1]: *** [/home/runner/R-patched/build/etc/Makeconf:211: estimate_time_unphased.o] Error 1
make[1]: Leaving directory '/var/local/PKGS/CRAN/junctions/src'
make[1]: Entering directory '/var/local/PKGS/CRAN/junctions/src'
make[1]: Leaving directory '/var/local/PKGS/CRAN/junctions/src'
ERROR: compilation failed for package 'junctions'
* removing '/home/runner/R-patched/lib/junctions'