* installing to library '/home/runner/R-patched/lib'
* installing *source* package 'rgeoda' ...
** this is package 'rgeoda' version '0.1.0'
** package 'rgeoda' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++ (Alpine 14.2.0) 14.2.0'
using C++17
make[1]: Entering directory '/var/local/PKGS/CRAN/rgeoda/src'
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/libgeoda.cpp -o libgeoda/libgeoda.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/gda_sa.cpp -o libgeoda/gda_sa.o
In file included from /home/runner/R-patched/lib/BH/include/boost/bind/mem_fn.hpp:23,
                 from /home/runner/R-patched/lib/BH/include/boost/mem_fn.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/function/function_template.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/function.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:23,
                 from libgeoda/gda_sa.cpp:3:
/home/runner/R-patched/lib/BH/include/boost/get_pointer.hpp:48:40: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/14.2.0/memory:78,
                 from /home/runner/R-patched/lib/BH/include/boost/iterator/iterator_facade.hpp:11,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range_core.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range.hpp:13,
                 from /home/runner/R-patched/lib/BH/include/boost/range/as_literal.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/trim.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:19:
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/gda_data.cpp -o libgeoda/gda_data.o
In file included from /home/runner/R-patched/lib/BH/include/boost/bind/mem_fn.hpp:23,
                 from /home/runner/R-patched/lib/BH/include/boost/mem_fn.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/function/function_template.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/function.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:23,
                 from libgeoda/gda_data.cpp:4:
/home/runner/R-patched/lib/BH/include/boost/get_pointer.hpp:48:40: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/14.2.0/memory:78,
                 from /home/runner/R-patched/lib/BH/include/boost/iterator/iterator_facade.hpp:11,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range_core.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range.hpp:13,
                 from /home/runner/R-patched/lib/BH/include/boost/range/as_literal.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/trim.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:19:
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/gda_weights.cpp -o libgeoda/gda_weights.o
In file included from /home/runner/R-patched/lib/BH/include/boost/bind/mem_fn.hpp:23,
                 from /home/runner/R-patched/lib/BH/include/boost/mem_fn.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/function/function_template.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/function.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:23,
                 from libgeoda/gda_weights.cpp:16:
/home/runner/R-patched/lib/BH/include/boost/get_pointer.hpp:48:40: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/14.2.0/bits/shared_ptr_base.h:59,
                 from /usr/include/c++/14.2.0/bits/shared_ptr.h:53,
                 from /usr/include/c++/14.2.0/regex:49,
                 from libgeoda/gda_weights.cpp:5:
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:17,
                 from /home/runner/R-patched/lib/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/runner/R-patched/lib/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/runner/R-patched/lib/BH/include/boost/graph/graph_concepts.hpp:17,
                 from /home/runner/R-patched/lib/BH/include/boost/graph/biconnected_components.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/graph/graph_util.hpp:12,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/graph/detect_biconnected_components.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/traverse.hpp:20,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/overlay.hpp:37,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/intersection_insert.hpp:34,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/intersection/interface.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/intersection/gc.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/difference.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/relate/implementation_gc.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/covered_by/implementation_gc.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/covered_by.hpp:25,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/buffer/buffered_piece_collection.hpp:33,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/buffer/buffer_inserter.hpp:30,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/buffer/implementation.hpp:25,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/buffer.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/geometry.hpp:63,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry.hpp:17,
                 from libgeoda/SpatialIndTypes.h:23,
                 from libgeoda/SpatialIndAlgs.h:9,
                 from libgeoda/gda_weights.cpp:23:
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/detail/shared_count.hpp:294:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  294 |     explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
      |                                 ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:354:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  354 |     explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
      |                               ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:365:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  365 |     shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
      |                      ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:423:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  423 |     shared_ptr & operator=( std::auto_ptr<Y> & r )
      |                                  ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:430:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  430 |     shared_ptr & operator=( std::auto_ptr<Y> && r )
      |                                  ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:432:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  432 |         this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
      |                                      ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/runner/R-patched/lib/BH/include/boost/scoped_ptr.hpp:13,
                 from /home/runner/R-patched/lib/BH/include/boost/graph/adjacency_list.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/graph/graph_util.hpp:13:
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/scoped_ptr.hpp: At global scope:
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/scoped_ptr.hpp:63:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   63 |     explicit scoped_ptr( std::auto_ptr<T> p ) noexcept : px( p.release() )
      |                               ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/gda_clustering.cpp -o libgeoda/gda_clustering.o
In file included from /home/runner/R-patched/lib/BH/include/boost/bind/mem_fn.hpp:23,
                 from /home/runner/R-patched/lib/BH/include/boost/mem_fn.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/function/function_template.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/function.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:23,
                 from libgeoda/gda_clustering.cpp:2:
/home/runner/R-patched/lib/BH/include/boost/get_pointer.hpp:48:40: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/14.2.0/memory:78,
                 from /home/runner/R-patched/lib/BH/include/boost/iterator/iterator_facade.hpp:11,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range_core.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range.hpp:13,
                 from /home/runner/R-patched/lib/BH/include/boost/range/as_literal.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/trim.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:19:
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/GenGeomAlgs.cpp -o libgeoda/GenGeomAlgs.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/GenUtils.cpp -o libgeoda/GenUtils.o
In file included from /home/runner/R-patched/lib/BH/include/boost/bind/mem_fn.hpp:23,
                 from /home/runner/R-patched/lib/BH/include/boost/mem_fn.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/function/function_template.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/function.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:23,
                 from libgeoda/GenUtils.cpp:27:
/home/runner/R-patched/lib/BH/include/boost/get_pointer.hpp:48:40: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/14.2.0/memory:78,
                 from /home/runner/R-patched/lib/BH/include/boost/iterator/iterator_facade.hpp:11,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range_core.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/range/iterator_range.hpp:13,
                 from /home/runner/R-patched/lib/BH/include/boost/range/as_literal.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/trim.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:19:
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/SpatialIndAlgs.cpp -o libgeoda/SpatialIndAlgs.o
In file included from /home/runner/R-patched/lib/BH/include/boost/bind/mem_fn.hpp:23,
                 from /home/runner/R-patched/lib/BH/include/boost/mem_fn.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/function/function_template.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/function.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/algorithm/string.hpp:23,
                 from libgeoda/SpatialIndAlgs.cpp:6:
/home/runner/R-patched/lib/BH/include/boost/get_pointer.hpp:48:40: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/14.2.0/memory:78,
                 from /home/runner/R-patched/lib/BH/include/boost/iterator/iterator_facade.hpp:11,
                 from /home/runner/R-patched/lib/BH/include/boost/iterator/iterator_adaptor.hpp:15,
                 from /home/runner/R-patched/lib/BH/include/boost/iterator/reverse_iterator.hpp:10,
                 from /home/runner/R-patched/lib/BH/include/boost/range/reverse_iterator.hpp:21,
                 from /home/runner/R-patched/lib/BH/include/boost/range/rend.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/foreach.hpp:82,
                 from libgeoda/SpatialIndAlgs.cpp:4:
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:17,
                 from /home/runner/R-patched/lib/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/runner/R-patched/lib/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/runner/R-patched/lib/BH/include/boost/graph/graph_concepts.hpp:17,
                 from /home/runner/R-patched/lib/BH/include/boost/graph/biconnected_components.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/graph/graph_util.hpp:12,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/graph/detect_biconnected_components.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/traverse.hpp:20,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/overlay.hpp:37,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/intersection_insert.hpp:34,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/intersection/interface.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/intersection/gc.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/difference.hpp:19,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/relate/implementation_gc.hpp:18,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/covered_by/implementation_gc.hpp:16,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/covered_by.hpp:25,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/buffer/buffered_piece_collection.hpp:33,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/buffer/buffer_inserter.hpp:30,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/buffer/implementation.hpp:25,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/buffer.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/geometry.hpp:63,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry.hpp:17,
                 from libgeoda/SpatialIndTypes.h:23,
                 from libgeoda/SpatialIndAlgs.h:9,
                 from libgeoda/SpatialIndAlgs.cpp:13:
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/detail/shared_count.hpp:294:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  294 |     explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
      |                                 ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:354:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  354 |     explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
      |                               ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:365:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  365 |     shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
      |                      ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:423:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  423 |     shared_ptr & operator=( std::auto_ptr<Y> & r )
      |                                  ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:430:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  430 |     shared_ptr & operator=( std::auto_ptr<Y> && r )
      |                                  ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/shared_ptr.hpp:432:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  432 |         this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
      |                                      ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/runner/R-patched/lib/BH/include/boost/scoped_ptr.hpp:13,
                 from /home/runner/R-patched/lib/BH/include/boost/graph/adjacency_list.hpp:22,
                 from /home/runner/R-patched/lib/BH/include/boost/geometry/algorithms/detail/overlay/graph/graph_util.hpp:13:
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/scoped_ptr.hpp: At global scope:
/home/runner/R-patched/lib/BH/include/boost/smart_ptr/scoped_ptr.hpp:63:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   63 |     explicit scoped_ptr( std::auto_ptr<T> p ) noexcept : px( p.release() )
      |                               ^~~~~~~~
/usr/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/pg/geoms.cpp -o libgeoda/pg/geoms.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/pg/utils.cpp -o libgeoda/pg/utils.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/shapelib/dbfopen.cpp -o libgeoda/shapelib/dbfopen.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/shapelib/safileio.cpp -o libgeoda/shapelib/safileio.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/shapelib/shpopen.cpp -o libgeoda/shapelib/shpopen.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/weights/PointsToContigWeights.cpp -o libgeoda/weights/PointsToContigWeights.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/weights/PolysToContigWeights.cpp -o libgeoda/weights/PolysToContigWeights.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/weights/GalWeight.cpp -o libgeoda/weights/GalWeight.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/weights/GwtWeight.cpp -o libgeoda/weights/GwtWeight.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/weights/GeodaWeight.cpp -o libgeoda/weights/GeodaWeight.o
g++ -std=gnu++17 -I"/home/runner/R-patched/build/include" -DNDEBUG -I./libgeoda -D__USE_PTHREAD__ -D__RGEODA__ -I'/home/runner/R-patched/lib/Rcpp/include' -I'/home/runner/R-patched/lib/BH/include' -I/usr/local/include    -fpic  -O2 -mtune=native -Wno-ignored-attributes -DRCPP_DEMANGLER_ENABLED=0   -c libgeoda/weights/VoronoiUtils.cpp -o libgeoda/weights/VoronoiUtils.o
libgeoda/weights/VoronoiUtils.cpp:30:10: fatal error: boost/geometry/multi/geometries/multi_point.hpp: No such file or directory
   30 | #include <boost/geometry/multi/geometries/multi_point.hpp>
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make[1]: *** [/home/runner/R-patched/build/etc/Makeconf:211: libgeoda/weights/VoronoiUtils.o] Error 1
make[1]: Leaving directory '/var/local/PKGS/CRAN/rgeoda/src'
make[1]: Entering directory '/var/local/PKGS/CRAN/rgeoda/src'
make[1]: Leaving directory '/var/local/PKGS/CRAN/rgeoda/src'
ERROR: compilation failed for package 'rgeoda'
* removing '/home/runner/R-patched/lib/rgeoda'
* restoring previous '/home/runner/R-patched/lib/rgeoda'