format-version: 1.2 data-version: https://w3id.org/metpo/releases/2026-06-12/metpo.owl idspace: dcterms http://purl.org/dc/terms/ idspace: METPO https://w3id.org/metpo/ idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# idspace: qudt http://qudt.org/schema/qudt/ idspace: skos http://www.w3.org/2004/02/skos/core# ontology: https://w3id.org/metpo/metpo.owl property_value: dcterms:contributor https://orcid.org/0000-0001-8175-045X property_value: dcterms:contributor https://orcid.org/0000-0002-6601-2165 property_value: dcterms:creator https://orcid.org/0000-0001-9076-6066 property_value: dcterms:description "METPO provides terms for microbial ecophysiological traits and phenotypes: growth preferences (temperature, pH, salinity, oxygen), metabolism, and cell morphology of bacteria and archaea. Its primary purpose is to harmonize terminology across major microbial trait databases (BacDive, BactoTraits, Madin bacteria_archaea_traits, MetaTraits) for use in KG-Microbe. METPO uses OBO-style annotation patterns (IAO textual definitions, oboInOwl synonyms) and cites terms from OMP, MicrO, GO, ECOCORE, and PATO as definition sources." xsd:string property_value: dcterms:license https://creativecommons.org/licenses/by/4.0/ property_value: dcterms:title "METPO: Microbial Ecophysiological Trait and Phenotype Ontology" xsd:string property_value: owl:versionInfo "2026-06-12" xsd:string property_value: seeAlso https://bioportal.bioontology.org/ontologies/METPO property_value: seeAlso https://bioregistry.io/registry/metpo property_value: seeAlso https://github.com/berkeleybop/metpo [Term] id: METPO:0000001 name: obsolete Temperature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000002 name: obsolete Salinity is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000003 name: obsolete pH is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000004 name: obsolete Oxygen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000005 name: obsolete Trophic type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000631 [Term] id: METPO:0000006 name: obsolete Motility is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000701 [Term] id: METPO:0000007 name: obsolete Sporulation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000870 [Term] id: METPO:0000008 name: obsolete Pressure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000009 name: obsolete GC content is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000127 [Term] id: METPO:000001 name: obsolete Temperature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000010 name: obsolete Cell Width is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000882 [Term] id: METPO:0000011 name: obsolete Cell Length is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000881 [Term] id: METPO:0000012 name: obsolete Temperature Optimum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000304 [Term] id: METPO:0000013 name: obsolete Temperature Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000306 [Term] id: METPO:0000014 name: obsolete pH Optimum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000331 [Term] id: METPO:0000015 name: obsolete pH Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000332 [Term] id: METPO:0000016 name: obsolete NaCl Optimum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000333 [Term] id: METPO:0000017 name: obsolete NaCl Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000334 [Term] id: METPO:0000018 name: obsolete pH delta is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000232 [Term] id: METPO:0000019 name: obsolete NaCl delta is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000335 [Term] id: METPO:000002 name: obsolete Salinity is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000020 name: obsolete Temperature Delta is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000303 [Term] id: METPO:0000021 name: obsolete METPO Morphology is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000022 name: obsolete Psychrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000614 [Term] id: METPO:0000023 name: obsolete Psychrotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000618 [Term] id: METPO:0000024 name: obsolete Mesophilie is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000025 name: obsolete Thermotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000619 [Term] id: METPO:0000026 name: obsolete Thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000616 [Term] id: METPO:0000027 name: obsolete Extreme thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000721 [Term] id: METPO:0000028 name: obsolete Hyperthermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000617 [Term] id: METPO:0000029 name: obsolete Extreme hyperthermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000721 [Term] id: METPO:000003 name: obsolete pH is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000030 name: obsolete Halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000620 [Term] id: METPO:0000031 name: obsolete Non-halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000624 [Term] id: METPO:0000032 name: obsolete Slight halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000625 [Term] id: METPO:0000033 name: obsolete Moderate halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000623 [Term] id: METPO:0000034 name: obsolete Extreme halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000628 [Term] id: METPO:0000035 name: obsolete Halotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000622 [Term] id: METPO:0000036 name: obsolete Haloalkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000621 [Term] id: METPO:0000037 name: obsolete Extreme Acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000038 name: obsolete Acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003003 [Term] id: METPO:0000039 name: obsolete Neutrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003001 [Term] id: METPO:000004 name: obsolete Oxygen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000040 name: obsolete Alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003002 [Term] id: METPO:0000041 name: obsolete Acid Tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000042 name: obsolete Alkali Tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000043 name: obsolete Extreme Alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000044 name: obsolete Facultative acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003007 [Term] id: METPO:0000045 name: obsolete Obligative acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003006 [Term] id: METPO:0000046 name: obsolete Aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000047 name: obsolete Anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000603 [Term] id: METPO:0000048 name: obsolete Facultative anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000605 [Term] id: METPO:0000049 name: obsolete Facultative aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000608 [Term] id: METPO:000005 name: obsolete Trophic type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000631 [Term] id: METPO:0000050 name: obsolete Microaerophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000604 [Term] id: METPO:0000051 name: obsolete Aerotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000609 [Term] id: METPO:0000052 name: obsolete Microaerotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000610 [Term] id: METPO:0000053 name: obsolete Aerotolerant anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000054 name: obsolete Obligate aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000606 [Term] id: METPO:0000055 name: obsolete Obligate anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000607 [Term] id: METPO:0000056 name: obsolete Oxygenic phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000057 name: obsolete Anoxygenic phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000058 name: obsolete Autotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000632 [Term] id: METPO:0000059 name: obsolete Photoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000656 [Term] id: METPO:000006 name: obsolete Motility is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000701 [Term] id: METPO:0000060 name: obsolete Chemoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000635 [Term] id: METPO:0000061 name: obsolete Heterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000644 [Term] id: METPO:0000062 name: obsolete Photoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000657 [Term] id: METPO:0000063 name: obsolete Chemoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000636 [Term] id: METPO:0000064 name: obsolete Lithotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000649 [Term] id: METPO:0000065 name: obsolete Organotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000655 [Term] id: METPO:0000066 name: obsolete Phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000660 [Term] id: METPO:0000067 name: obsolete Chemotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000641 [Term] id: METPO:0000068 name: obsolete Oligotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000654 [Term] id: METPO:0000069 name: obsolete Copiotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000642 [Term] id: METPO:000007 name: obsolete Sporulation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000870 [Term] id: METPO:0000070 name: obsolete Lithoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000647 [Term] id: METPO:0000071 name: obsolete Mixotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000652 [Term] id: METPO:0000072 name: obsolete Lithoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000648 [Term] id: METPO:0000073 name: obsolete Chemoorganoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000640 [Term] id: METPO:0000074 name: obsolete Chemolithoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000637 [Term] id: METPO:0000075 name: obsolete Methylotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000651 [Term] id: METPO:0000076 name: obsolete Methanotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000650 [Term] id: METPO:0000077 name: obsolete Carboxydotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000633 [Term] id: METPO:0000078 name: obsolete Hydrogenotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000646 [Term] id: METPO:0000079 name: obsolete Hydrogen oxidizer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000008 name: obsolete Pressure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000080 name: obsolete Hydrogen producer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000081 name: obsolete Nitrogen fixer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000082 name: obsolete Methanogen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000083 name: obsolete Sulfate reducer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000084 name: obsolete Sulfur oxidizer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000085 name: obsolete Denitrifier is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000086 name: obsolete Capnophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1005021 [Term] id: METPO:0000087 name: obsolete Motile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000702 [Term] id: METPO:0000088 name: obsolete Non-motile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000703 [Term] id: METPO:0000089 name: obsolete Flagellated is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000704 [Term] id: METPO:000009 name: obsolete GC content is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000127 [Term] id: METPO:0000090 name: obsolete Peritrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000091 name: obsolete Lophotrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000092 name: obsolete Monotrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000093 name: obsolete Ciliated is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000094 name: obsolete Gliding is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000706 [Term] id: METPO:0000095 name: obsolete Twitching is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000096 name: obsolete Sliding is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000097 name: obsolete Swarming is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000098 name: obsolete Endospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000099 name: obsolete Exospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000010 name: obsolete Cell Width is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000882 [Term] id: METPO:0000100 name: obsolete Myxospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000101 name: obsolete Arthrospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000102 name: obsolete Conidia is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000103 name: obsolete Sporangiospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000104 name: obsolete Zygospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000105 name: obsolete Akinetes is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000106 name: obsolete Chlamydospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000107 name: obsolete Sporocysts is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000108 name: obsolete Hypnospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000109 name: obsolete Gemmae is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000011 name: obsolete Cell Length is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000881 [Term] id: METPO:0000110 name: obsolete Oospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000111 name: obsolete Azygospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000112 name: obsolete Cysts is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000113 name: obsolete Ascospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000114 name: obsolete Basidiospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000115 name: obsolete Aleuriospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000116 name: obsolete Stylospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000117 name: obsolete Sclerotia is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000118 name: obsolete Zoospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000119 name: obsolete Teliospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000012 name: obsolete Temperature Optimum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000304 [Term] id: METPO:0000120 name: obsolete Urediniospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000121 name: obsolete Pycnidiospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000122 name: obsolete Acriospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000123 name: obsolete Aplanospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000124 name: obsolete Statismospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000125 name: obsolete Barotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000126 name: obsolete Piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000127 name: obsolete Piezotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000128 name: obsolete Piezosensitive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000129 name: obsolete Obligate barophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000013 name: obsolete Temperature Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000306 [Term] id: METPO:0000130 name: obsolete Facultative barophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000131 name: obsolete Hyperbarophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000132 name: obsolete Hypobarophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000133 name: obsolete Atmospheric pressure-adapted is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000134 name: obsolete Moderate piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000135 name: obsolete Extreme piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000136 name: obsolete Stenopiezic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000137 name: obsolete Eurypiezic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000138 name: obsolete Pressure-sensitive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000139 name: obsolete Pressure-resistant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000014 name: obsolete pH Optimum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000331 [Term] id: METPO:0000140 name: obsolete Pressure-adapted is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000141 name: obsolete Piezo-acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000142 name: obsolete Piezo-alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000143 name: obsolete Piezo-halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000144 name: obsolete Piezo-psychrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000145 name: obsolete Piezo-thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000146 name: obsolete Piezo-lithoautotrophe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000147 name: obsolete Piezo-chemoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000636 [Term] id: METPO:0000148 name: obsolete Piezo-oligotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000149 name: obsolete Piezo-endolithic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000015 name: obsolete pH Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000332 [Term] id: METPO:0000150 name: obsolete Piezo-tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000151 name: obsolete GC low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000429 [Term] id: METPO:0000152 name: obsolete GC mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000430 [Term] id: METPO:0000153 name: obsolete GC mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000431 [Term] id: METPO:0000154 name: obsolete GC high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000432 [Term] id: METPO:0000155 name: obsolete Cell width very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000887 [Term] id: METPO:0000156 name: obsolete Cell width low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000882 [Term] id: METPO:0000157 name: obsolete Cell width mid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000889 [Term] id: METPO:0000158 name: obsolete Cell width high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000882 [Term] id: METPO:0000159 name: obsolete Cell length very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000883 [Term] id: METPO:000016 name: obsolete NaCl Optimum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000333 [Term] id: METPO:0000160 name: obsolete Cell length low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000881 [Term] id: METPO:0000161 name: obsolete Cell length mid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000885 [Term] id: METPO:0000162 name: obsolete Cell length high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000881 [Term] id: METPO:0000163 name: obsolete Temperature Optimum very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000441 [Term] id: METPO:0000164 name: obsolete Temperature Optimum low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000442 [Term] id: METPO:0000165 name: obsolete Temperature Optimum mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000443 [Term] id: METPO:0000166 name: obsolete Temperature Optimum mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000444 [Term] id: METPO:0000167 name: obsolete Temperature Optimum mid3 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000445 [Term] id: METPO:0000168 name: obsolete Temperature Optimum mid4 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000446 [Term] id: METPO:0000169 name: obsolete Temperature Optimum high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000447 [Term] id: METPO:000017 name: obsolete NaCl Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000334 [Term] id: METPO:0000170 name: obsolete Temperature Range very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000448 [Term] id: METPO:0000171 name: obsolete Temperature Range low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000449 [Term] id: METPO:0000172 name: obsolete Temperature Range mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000450 [Term] id: METPO:0000173 name: obsolete Temperature Range mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000451 [Term] id: METPO:0000174 name: obsolete Temperature Range mid3 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000452 [Term] id: METPO:0000175 name: obsolete Temperature Range mid4 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000453 [Term] id: METPO:0000176 name: obsolete Temperature Range high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000454 [Term] id: METPO:0000177 name: obsolete pH Optimum low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000455 [Term] id: METPO:0000178 name: obsolete pH Optimum mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000456 [Term] id: METPO:0000179 name: obsolete pH Optimum mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000457 [Term] id: METPO:000018 name: obsolete pH delta is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000232 [Term] id: METPO:0000180 name: obsolete pH Optimum high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000458 [Term] id: METPO:0000181 name: obsolete pH Range very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000459 [Term] id: METPO:0000182 name: obsolete pH Range low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000460 [Term] id: METPO:0000183 name: obsolete pH Range mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000461 [Term] id: METPO:0000184 name: obsolete pH Range mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000462 [Term] id: METPO:0000185 name: obsolete pH Range mid3 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000463 [Term] id: METPO:0000186 name: obsolete pH Range high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000464 [Term] id: METPO:0000187 name: obsolete NaCl Optimum low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000465 [Term] id: METPO:0000188 name: obsolete NaCl Optimum mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000466 [Term] id: METPO:0000189 name: obsolete NaCl Optimum mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000467 [Term] id: METPO:000019 name: obsolete NaCl delta is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000335 [Term] id: METPO:0000190 name: obsolete NaCl Optimum high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000468 [Term] id: METPO:0000191 name: obsolete NaCl Range low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000469 [Term] id: METPO:0000192 name: obsolete NaCl Range mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000470 [Term] id: METPO:0000193 name: obsolete NaCl Range mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000471 [Term] id: METPO:0000194 name: obsolete NaCl Range high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000472 [Term] id: METPO:0000195 name: obsolete pH Delta very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000473 [Term] id: METPO:0000196 name: obsolete pH Delta low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000474 [Term] id: METPO:0000197 name: obsolete pH Delta mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000475 [Term] id: METPO:0000198 name: obsolete pH Delta mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000476 [Term] id: METPO:0000199 name: obsolete pH Delta mid3 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000477 [Term] id: METPO:000020 name: obsolete Temperature Delta is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000303 [Term] id: METPO:0000200 name: obsolete pH Delta high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000478 [Term] id: METPO:0000201 name: obsolete NaCl Delta low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000479 [Term] id: METPO:0000202 name: obsolete NaCl Delta mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000481 [Term] id: METPO:0000203 name: obsolete NaCl Delta mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000481 [Term] id: METPO:0000204 name: obsolete NaCl Delta high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000482 [Term] id: METPO:0000205 name: obsolete Temperature Delta very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000483 [Term] id: METPO:0000206 name: obsolete Temperature Delta low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000484 [Term] id: METPO:0000207 name: obsolete Temperature Delta mid1 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000485 [Term] id: METPO:0000208 name: obsolete Temperature Delta mid2 is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000486 [Term] id: METPO:0000209 name: obsolete Temperature Delta high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000487 [Term] id: METPO:000021 name: obsolete Morphology is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000210 name: obsolete Bacillus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000211 name: obsolete Branced is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000212 name: obsolete Coccobacillus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000213 name: obsolete Coccus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000214 name: obsolete Crescent is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000215 name: obsolete Curved is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000216 name: obsolete Curved Spiral is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000217 name: obsolete Diplococcus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000218 name: obsolete Disc is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000219 name: obsolete Dumbbell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000022 name: obsolete Other is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000220 name: obsolete Ellipsoidal is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000673 [Term] id: METPO:0000221 name: obsolete Filament is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000222 name: obsolete Flask is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000223 name: obsolete Fusiform is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000224 name: obsolete Helical is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000225 name: obsolete Irregular is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000226 name: obsolete Oval is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000227 name: obsolete Ovoid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000228 name: obsolete Pleomorphic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000229 name: obsolete Ring is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000023 name: obsolete Psychrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000614 [Term] id: METPO:0000230 name: obsolete Rod is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000231 name: obsolete Sphere is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000232 name: obsolete Spindle is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000233 name: obsolete Spiral is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000234 name: obsolete Spirochete is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000235 name: obsolete Spore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000236 name: obsolete Square is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000237 name: obsolete Star is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000238 name: obsolete Star - Dumbbell - Pleomorphic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000239 name: obsolete Tailed is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000024 name: obsolete Psychrotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000618 [Term] id: METPO:0000240 name: obsolete Triangular is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000241 name: obsolete Vibrio is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000242 name: obsolete Environmental Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000243 name: obsolete Growth Condition is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000244 name: obsolete Physiological Trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000245 name: obsolete Metabolic Classification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000246 name: obsolete Cellular Characteristic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000247 name: obsolete Taxonomic Feature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000248 name: obsolete Microbial Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000249 name: obsolete Growth Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000025 name: obsolete Mesophilie is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000250 name: obsolete Structural Feature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000251 name: obsolete Temperature Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000252 name: obsolete Salinity Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000253 name: obsolete pH Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000254 name: obsolete Oxygen Requirement is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000255 name: obsolete Carbon Source Utilization is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000256 name: obsolete Energy Acquisition Mode is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000257 name: obsolete Electron Donor Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000258 name: obsolete Motility Mechanism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000259 name: obsolete Motility Structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000026 name: obsolete Thermotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000619 [Term] id: METPO:0000260 name: obsolete Bacterial Spore Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000261 name: obsolete Fungal Spore Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000262 name: obsolete Reproductive Structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000263 name: obsolete Dormancy Structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000264 name: obsolete Pressure Adaptation Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000265 name: obsolete Pressure Tolerance Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007070 [Term] id: METPO:0000266 name: obsolete Genomic Feature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000267 name: obsolete Cell Dimension is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000268 name: obsolete Optimal Growth Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000269 name: obsolete Growth Range Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000027 name: obsolete Thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000616 [Term] id: METPO:0000270 name: obsolete Growth Tolerance Metric is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000271 name: obsolete Cell Shape is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000666 [Term] id: METPO:0000272 name: obsolete Cell Arrangement is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007005 [Term] id: METPO:0000273 name: obsolete Colony Morphology is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007062 [Term] id: METPO:0000274 name: obsolete Physical Property is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000275 name: obsolete Environmental Context is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000276 name: obsolete Biological Property is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000630 [Term] id: METPO:0000277 name: obsolete Functional Classification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000278 name: obsolete Classification Property is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000279 name: obsolete METPO Biological Process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000630 [Term] id: METPO:000028 name: obsolete Extreme thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000721 [Term] id: METPO:0000280 name: obsolete Measurable Property is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0000281 name: obsolete Gram-stain negative is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000699 [Term] id: METPO:0000282 name: obsolete Gram-stain positive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000698 [Term] id: METPO:000029 name: obsolete Hyperthermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000617 [Term] id: METPO:000030 name: obsolete Extreme hyperthermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000721 [Term] id: METPO:000031 name: obsolete Halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000620 [Term] id: METPO:000032 name: obsolete Non-halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000624 [Term] id: METPO:000033 name: obsolete Slight halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000625 [Term] id: METPO:000034 name: obsolete Moderate halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000623 [Term] id: METPO:000035 name: obsolete Extreme halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000628 [Term] id: METPO:000036 name: obsolete Halotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000622 [Term] id: METPO:000037 name: obsolete Haloalkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000621 [Term] id: METPO:000038 name: obsolete Extreme Acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000039 name: obsolete Acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003003 [Term] id: METPO:000040 name: obsolete Neutrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003001 [Term] id: METPO:000041 name: obsolete Alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003002 [Term] id: METPO:000042 name: obsolete Acid Tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000043 name: obsolete Alkali Tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000044 name: obsolete Extreme Alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000045 name: obsolete Facultative acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003007 [Term] id: METPO:000046 name: obsolete Obligative acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003006 [Term] id: METPO:000047 name: obsolete Aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000048 name: obsolete Anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000603 [Term] id: METPO:000049 name: obsolete Facultative anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000605 [Term] id: METPO:000050 name: obsolete Facultative aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000608 [Term] id: METPO:000051 name: obsolete Microaerophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000604 [Term] id: METPO:000052 name: obsolete Aerotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000609 [Term] id: METPO:000053 name: obsolete Microaerotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000610 [Term] id: METPO:000054 name: obsolete Aerotolerant anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000055 name: obsolete Obligate aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000606 [Term] id: METPO:000056 name: obsolete Obligate anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000607 [Term] id: METPO:000057 name: obsolete Oxygenic phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000058 name: obsolete Anoxygenic phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000059 name: obsolete Autotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000632 [Term] id: METPO:000060 name: obsolete Photoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000656 [Term] id: METPO:000061 name: obsolete Chemoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000635 [Term] id: METPO:000062 name: obsolete Heterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000644 [Term] id: METPO:000063 name: obsolete Photoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000657 [Term] id: METPO:000064 name: obsolete Chemoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000636 [Term] id: METPO:000065 name: obsolete Lithotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000649 [Term] id: METPO:000066 name: obsolete Organotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000655 [Term] id: METPO:000067 name: obsolete Phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000660 [Term] id: METPO:000068 name: obsolete Chemotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000641 [Term] id: METPO:000069 name: obsolete Oligotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000654 [Term] id: METPO:000070 name: obsolete Copiotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000642 [Term] id: METPO:000071 name: obsolete Lithoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000647 [Term] id: METPO:000072 name: obsolete Mixotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000652 [Term] id: METPO:000073 name: obsolete Lithoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000648 [Term] id: METPO:000074 name: obsolete Chemoorganoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000640 [Term] id: METPO:000075 name: obsolete Chemolithoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000637 [Term] id: METPO:000076 name: obsolete Methylotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000651 [Term] id: METPO:000077 name: obsolete Methanotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000650 [Term] id: METPO:000078 name: obsolete Carboxydotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000633 [Term] id: METPO:000079 name: obsolete Hydrogenotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000646 [Term] id: METPO:000080 name: obsolete Hydrogen oxidizer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000081 name: obsolete Hydrogen producer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000082 name: obsolete Nitrogen fixer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000083 name: obsolete Methanogen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000084 name: obsolete Sulfate reducer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000085 name: obsolete Sulfur oxidizer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000086 name: obsolete Denitrifier is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000087 name: obsolete Capnophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1005021 [Term] id: METPO:000088 name: obsolete Motile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000702 [Term] id: METPO:000089 name: obsolete Non-motile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000703 [Term] id: METPO:000090 name: obsolete Flagellated is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000704 [Term] id: METPO:000091 name: obsolete Peritrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000092 name: obsolete Lophotrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000093 name: obsolete Monotrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000094 name: obsolete Ciliated is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000095 name: obsolete Gliding is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000706 [Term] id: METPO:000096 name: obsolete Twitching is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000097 name: obsolete Sliding is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000098 name: obsolete Swarming is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000099 name: obsolete Endospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000100 name: obsolete Exospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001000 name: obsolete sensitivity to oxygen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001001 name: obsolete sensitivity toward is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001002 name: obsolete 'organismal quality' is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001003 name: obsolete 'physicial object quality' is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001004 name: obsolete 'quality' is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000188 [Term] id: METPO:0001006 name: obsolete size is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001007 name: obsolete 1-D extent is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001008 name: obsolete width is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001009 name: obsolete length is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000101 name: obsolete Myxospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001010 name: obsolete 'prokaryotic metabolically differentiated cell' is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001012 name: obsolete heterotrophy is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001013 name: obsolete structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001014 name: obsolete spore type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001016 name: obsolete sensitivity toward pressure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001017 name: obsolete sensitivity toward NaCl is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001018 name: obsolete sensitivity toward pH is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001019 name: obsolete sensitivity toward temperature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000102 name: obsolete Arthrospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001020 name: obsolete metabolic constraints is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:0001021 name: obsolete cell by chemical produced is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000103 name: obsolete Conidia is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000104 name: obsolete Sporangiospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000105 name: obsolete Zygospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000106 name: obsolete Akinetes is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000107 name: obsolete Chlamydospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000108 name: obsolete Sporocysts is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000109 name: obsolete Hypnospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000110 name: obsolete Gemmae is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000111 name: obsolete Oospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000112 name: obsolete Azygospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000113 name: obsolete Cysts is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000114 name: obsolete Ascospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000115 name: obsolete Basidiospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000116 name: obsolete Aleuriospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000117 name: obsolete Stylospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000118 name: obsolete Sclerotia is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000119 name: obsolete Zoospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000120 name: obsolete Teliospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000121 name: obsolete Urediniospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000122 name: obsolete Pycnidiospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000123 name: obsolete Acriospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000124 name: obsolete Aplanospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000125 name: obsolete Statismospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000126 name: obsolete Barotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000127 name: obsolete Piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000128 name: obsolete Piezotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000129 name: obsolete Piezosensitive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000130 name: obsolete Obligate barophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000131 name: obsolete Facultative barophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000132 name: obsolete Hyperbarophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000133 name: obsolete Hypobarophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000134 name: obsolete Atmospheric pressure-adapted is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000135 name: obsolete Moderate piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000136 name: obsolete Extreme piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000137 name: obsolete Stenopiezic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000138 name: obsolete Eurypiezic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000139 name: obsolete Pressure-sensitive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000140 name: obsolete Pressure-resistant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000141 name: obsolete Pressure-adapted is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000142 name: obsolete Piezo-acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000143 name: obsolete Piezo-alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000144 name: obsolete Piezo-halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000145 name: obsolete Piezo-psychrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000146 name: obsolete Piezo-thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000147 name: obsolete Piezo-lithoautotrophe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000148 name: obsolete Piezo-chemoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000636 [Term] id: METPO:000149 name: obsolete Piezo-oligotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000150 name: obsolete Piezo-endolithic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000151 name: obsolete Piezo-tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000152 name: obsolete GC% low ( < 42.65) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000153 name: obsolete GC% mid1 (42.65 - 57) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000154 name: obsolete GC% mid2 (57 - 66.3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000155 name: obsolete GC% high ( > 66.3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000156 name: obsolete Cell width uM very low (< 0.5) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000157 name: obsolete Cell width uM low (0.5 - 0.65) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000158 name: obsolete Cell width uM mid (0.65 - 0.9) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000159 name: obsolete Cell width uM high (> 0.9) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000160 name: obsolete Cell length uM very low (<= 1.3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000161 name: obsolete Cell length uM low (1.3 - 2) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000162 name: obsolete Cell length uM mid (2 - 3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000163 name: obsolete Cell length uM high (> 3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000164 name: obsolete Temperature Optimum C very low (<= 10) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000441 [Term] id: METPO:000165 name: obsolete Temperature Optimum C low (10 - 22) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000166 name: obsolete Temperature Optimum C mid1 (22 - 27) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000443 [Term] id: METPO:000167 name: obsolete Temperature Optimum C mid2 (27 - 30) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000444 [Term] id: METPO:000168 name: obsolete Temperature Optimum C mid3 (30 - 34) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000445 [Term] id: METPO:000169 name: obsolete Temperature Optimum C mid4 (34 - 40) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000445 [Term] id: METPO:000170 name: obsolete Temperature Optimum C high (> 40) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000447 [Term] id: METPO:000171 name: obsolete Temperature Range C very low (<= 10) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000448 [Term] id: METPO:000172 name: obsolete Temperature Range C low (10 - 22) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000173 name: obsolete Temperature Range C mid1 (22 - 27) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000174 name: obsolete Temperature Range C mid2 (27 - 30) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000175 name: obsolete Temperature Range C mid3 (30 - 34) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000176 name: obsolete Temperature Range C mid4 (34 - 40) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000177 name: obsolete Temperature Range C high (> 40) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000454 [Term] id: METPO:000178 name: obsolete pH Optimum low (0 - 6) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000179 name: obsolete pH Optimum mid1 (6 - 7) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000180 name: obsolete pH Optimum mid2 (7 - 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000181 name: obsolete pH Optimum high (8 - 14) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000182 name: obsolete pH Range very low (0 - 4) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000459 [Term] id: METPO:000183 name: obsolete pH Range low (4 - 6) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000184 name: obsolete pH Range mid1 (6 - 7) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000185 name: obsolete pH Range mid2 (7 - 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000186 name: obsolete pH Range mid3 (8 - 10) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000187 name: obsolete pH Range high (10 - 14) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000188 name: obsolete % NaCl Optimum low (<= 1) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000189 name: obsolete % NaCl Optimum mid1 (1 - 3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000190 name: obsolete % NaCl Optimum mid2 (3 - 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000191 name: obsolete % NaCl Optimum high (> 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000468 [Term] id: METPO:000192 name: obsolete % NaCl Range low (<= 1) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000193 name: obsolete % NaCl Range mid1 (1 - 3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000194 name: obsolete % NaCl Range mid2 (3 - 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000195 name: obsolete % NaCl Range high (> 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000196 name: obsolete pH delta very low (<= 1) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000473 [Term] id: METPO:000197 name: obsolete pH delta low (1 - 2) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000198 name: obsolete pH delta mid1 (2 - 3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000199 name: obsolete pH delta mid2 (3 - 4) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000200 name: obsolete pH delta mid3 (4 - 5) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000201 name: obsolete pH delta high (5 - 9) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000202 name: obsolete % NaCl delta low (<= 1) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000203 name: obsolete % NaCl delta mid2 (1 - 3) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000204 name: obsolete % NaCl delta mid2 (3 - 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000205 name: obsolete % NaCl delta high (>= 8) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000206 name: obsolete Temperature C delta very low (1 - 5) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000483 [Term] id: METPO:000207 name: obsolete Temperature C delta low (5 - 10) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000208 name: obsolete Temperature C delta mid1 (10 - 20) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000209 name: obsolete Temperature C delta mid2 (20 - 30) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000210 name: obsolete Temperature C delta high (>= 30) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000487 [Term] id: METPO:000211 name: obsolete bacillus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000212 name: obsolete branced is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000213 name: obsolete coccobacillus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000214 name: obsolete coccus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000215 name: obsolete crescent is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000216 name: obsolete curved is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000217 name: obsolete curved spiral is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000218 name: obsolete diplococcus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000219 name: obsolete disc is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000220 name: obsolete dumbbell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000221 name: obsolete ellipsoidal is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000673 [Term] id: METPO:000222 name: obsolete filament is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000223 name: obsolete flask is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000224 name: obsolete fusiform is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000225 name: obsolete helical is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000226 name: obsolete irregular is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000227 name: obsolete oval is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000228 name: obsolete ovoid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000229 name: obsolete pleomorphic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000230 name: obsolete ring is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000231 name: obsolete rod is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000232 name: obsolete sphere is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000233 name: obsolete spindle is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000234 name: obsolete spiral is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000235 name: obsolete spirochete is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000236 name: obsolete spore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000237 name: obsolete square is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000238 name: obsolete star is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000239 name: obsolete star - dumbbell - pleomorphic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000240 name: obsolete tailed is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000241 name: obsolete triangular is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000242 name: obsolete vibrio is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000243 name: obsolete Environmental Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000244 name: obsolete Growth Condition is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000245 name: obsolete Physiological Trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000246 name: obsolete Metabolic Classification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000247 name: obsolete Cellular Characteristic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000248 name: obsolete Taxonomic Feature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000249 name: obsolete Microbial Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000250 name: obsolete Growth Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000251 name: obsolete Structural Feature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000252 name: obsolete Temperature Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000253 name: obsolete Salinity Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000254 name: obsolete pH Adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000255 name: obsolete Oxygen Requirement is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000256 name: obsolete Carbon Source Utilization is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000257 name: obsolete Energy Acquisition Mode is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000258 name: obsolete Electron Donor Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000259 name: obsolete Motility Mechanism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000260 name: obsolete Motility Structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000261 name: obsolete Bacterial Spore Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000262 name: obsolete Fungal Spore Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000263 name: obsolete Reproductive Structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000264 name: obsolete Dormancy Structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000265 name: obsolete Pressure Adaptation Type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000266 name: obsolete Pressure Tolerance Range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007070 [Term] id: METPO:000267 name: obsolete GenomicFeature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000268 name: obsolete Cell Dimension is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000269 name: obsolete Optimal Growth Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000270 name: obsolete Growth Range Parameter is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000271 name: obsolete Growth Tolerance Metric is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:000272 name: obsolete Cell Shape is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000666 [Term] id: METPO:000273 name: obsolete Cell Arrangement is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007005 [Term] id: METPO:000274 name: obsolete Colony Morphology is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007062 [Term] id: METPO:1000001 name: obsolete acid-fast is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000002 name: obsolete acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003003 [Term] id: METPO:1000003 name: obsolete active transport is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000004 name: obsolete adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000005 name: obsolete adaptive trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000006 name: obsolete adhesin is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000007 name: obsolete adhesion structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000008 name: obsolete aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000009 name: obsolete aerobic respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000801 [Term] id: METPO:1000010 name: obsolete aerotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000609 [Term] id: METPO:1000011 name: obsolete aggregate is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000012 name: obsolete akinete is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000013 name: obsolete alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003002 [Term] id: METPO:1000014 name: obsolete ammonification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000015 name: obsolete amylolysis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000016 name: obsolete anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000603 [Term] id: METPO:1000017 name: obsolete anaerobic respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000802 [Term] id: METPO:1000018 name: obsolete anoxygenic photosynthesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000019 name: obsolete antibiotic production is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000020 name: obsolete antibiotic resistance is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000021 name: obsolete antimicrobial resistance is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000022 name: obsolete appendage is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000023 name: obsolete arthrospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000024 name: obsolete ascospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000025 name: obsolete autotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000632 [Term] id: METPO:1000026 name: obsolete autotrophic process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000027 name: obsolete auxotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000028 name: obsolete axial filament is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000029 name: obsolete bacillus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000030 name: obsolete barophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000031 name: obsolete barotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000032 name: obsolete basidiospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000033 name: obsolete binary fission is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000034 name: obsolete biofilm is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000035 name: obsolete biofilm component is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000036 name: obsolete biofilm formation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000037 name: obsolete biogeochemical cycling is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000038 name: obsolete bioluminescence is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000039 name: obsolete budding is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000040 name: obsolete buoyancy structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000041 name: obsolete capnophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1005021 [Term] id: METPO:1000042 name: obsolete capsule is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000043 name: obsolete carbon fixation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000044 name: obsolete carbon source is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000045 name: obsolete carboxydotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000633 [Term] id: METPO:1000046 name: obsolete cell arrangement is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007005 [Term] id: METPO:1000047 name: obsolete cell envelope is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000048 name: obsolete cell length category is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000049 name: obsolete cell shape is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000666 [Term] id: METPO:1000050 name: obsolete cell size is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000051 name: obsolete cell wall characteristic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000052 name: obsolete cell wall component is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000053 name: obsolete cell width category is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000054 name: obsolete cellular characteristic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000055 name: obsolete cellular component is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000056 name: obsolete cellular process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000057 name: obsolete cellular product is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000058 name: obsolete cellulolysis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000059 name: phenotype def: "A quality that differentiates specific instances of a species from other instances of the same species." [] {IAO:0000119="PHIPO:0000505"} is_a: METPO:1000188 ! quality property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string property_value: skos:closeMatch https://biolink.github.io/biolink-model/PhenotypicQuality [Term] id: METPO:1000060 name: metabolism def: "A biological process that maintain life in an organism." [] {IAO:0000119="https://purl.dsmz.de/schema/MetabolicProcess", IAO:0000119="GO:0008152"} is_a: METPO:1000630 ! biological process property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000061 name: obsolete chemoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000636 [Term] id: METPO:1000062 name: obsolete chemotaxis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000063 name: obsolete chlamydospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000064 name: obsolete class is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000065 name: obsolete clinically relevant feature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000066 name: obsolete coccus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000067 name: obsolete cold shock protein is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000068 name: obsolete cold shock response is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000069 name: obsolete colonization is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000070 name: obsolete colony elevation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000071 name: obsolete colony margin is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000072 name: obsolete colony morphology is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1007062 [Term] id: METPO:1000073 name: obsolete colony texture is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000074 name: obsolete commensalism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000075 name: obsolete community behavior is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000076 name: obsolete community structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000077 name: obsolete compatible solute is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000078 name: obsolete competence is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000079 name: obsolete component is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000080 name: obsolete conidium is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000081 name: obsolete conjugation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000082 name: obsolete CRISPR is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000083 name: obsolete culturability is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000084 name: obsolete cyst is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000085 name: obsolete death phase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000086 name: obsolete denitrification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1005038 [Term] id: METPO:1000087 name: obsolete developmental process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000088 name: obsolete diagnostic enzyme is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000089 name: obsolete diagnostic feature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000090 name: obsolete diazotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000091 name: obsolete differentiation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000092 name: obsolete dimorphism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000093 name: obsolete disc-shaped cell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000094 name: obsolete domain is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000095 name: obsolete dormancy is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000096 name: obsolete dormancy structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000097 name: obsolete dumbbell-shaped cell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000672 [Term] id: METPO:1000098 name: obsolete ecological niche is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000099 name: obsolete ecological process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000630 [Term] id: METPO:1000100 name: obsolete ecological trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000101 name: obsolete ectosymbiosis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000102 name: obsolete electron acceptor is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000103 name: obsolete electron donor is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000104 name: obsolete endospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000105 name: obsolete endosymbiosis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000106 name: obsolete energy metabolism process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000107 name: obsolete enzyme activity is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000108 name: obsolete epigenetic modification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000109 name: obsolete evolutionary process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000110 name: obsolete exospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000111 name: obsolete exponential phase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000112 name: obsolete extracellular is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000113 name: obsolete extracellular polysaccharide is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000114 name: obsolete extreme halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000628 [Term] id: METPO:1000115 name: obsolete extremophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000116 name: obsolete facultative is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000117 name: obsolete facultative anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000605 [Term] id: METPO:1000118 name: obsolete family is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000119 name: obsolete fastidious is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000120 name: obsolete fermentation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1002005 [Term] id: METPO:1000121 name: obsolete filamentous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000122 name: obsolete fimbriae is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000123 name: obsolete flagellum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000124 name: obsolete flask-shaped cell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000125 name: obsolete fungal spore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000126 name: obsolete gas vesicle is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000127 name: GC content def: "A quality that is describing the percentage of guanine and cytosine nucleotides in genomic DNA, calculated as the ratio of GC base pairs to total base pairs." [] {IAO:0000119="https://purl.dsmz.de/schema/GCContent"} synonym: "GC percentage" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000188 ! quality property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000128 name: obsolete high GC content is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000127 [Term] id: METPO:1000129 name: obsolete low GC content is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000127 [Term] id: METPO:1000130 name: obsolete lower-mid GC content is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000131 name: obsolete upper-mid GC content is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000132 name: obsolete generation time is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000133 name: obsolete genetic element is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000134 name: obsolete genetic exchange is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000135 name: obsolete genetic process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000136 name: obsolete genome size is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000137 name: obsolete genomic element is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000138 name: obsolete genomic island is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000139 name: obsolete genomic trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000140 name: obsolete genus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000141 name: obsolete gliding motility is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000142 name: obsolete global regulator is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000143 name: obsolete Gram-negative is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000699 [Term] id: METPO:1000144 name: obsolete Gram-positive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000698 [Term] id: METPO:1000145 name: obsolete Gram stain is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000697 [Term] id: METPO:1000146 name: obsolete growth characteristic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000147 name: obsolete growth conditions constraints is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000148 name: obsolete growth pattern is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000149 name: obsolete growth rate is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000150 name: obsolete habitat is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000151 name: obsolete halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000620 [Term] id: METPO:1000152 name: obsolete halotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000622 [Term] id: METPO:1000153 name: obsolete heat shock protein is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000154 name: obsolete heat shock response is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000155 name: obsolete hemolysis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1005025 [Term] id: METPO:1000156 name: obsolete heterocyst is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000157 name: obsolete heterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000644 [Term] id: METPO:1000158 name: obsolete holdfast is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000159 name: obsolete horizontal gene transfer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000160 name: obsolete hydrolase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000161 name: obsolete hyperthermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000617 [Term] id: METPO:1000162 name: obsolete inclusion body is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000163 name: obsolete infection is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000164 name: obsolete interaction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000165 name: obsolete interaction with a phage is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000166 name: obsolete interaction with an environment is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000167 name: obsolete interaction with host is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000168 name: obsolete interaction within a community is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000169 name: obsolete intracellular is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000170 name: obsolete invasion is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000171 name: obsolete laboratory characteristic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000172 name: obsolete lag phase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000173 name: obsolete life cycle is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000174 name: obsolete life cycle phase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000175 name: obsolete lipolysis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000176 name: obsolete lipopolysaccharide is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000177 name: obsolete localization is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000178 name: obsolete lysogeny is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000179 name: obsolete macroscopic trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000180 name: obsolete magnetotaxis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000181 name: obsolete mesophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000615 [Term] id: METPO:1000182 name: obsolete metabolic partner is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000183 name: obsolete metabolic trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000184 name: obsolete methanogenesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000844 [Term] id: METPO:1000185 name: obsolete methylation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000186 name: material entity def: "An object or portion of a substance or mixture of substances that consists of matter" [] {IAO:0000119="BFO:0000040"} property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000187 name: obsolete process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000188 name: quality def: "A characteristic of an entity that depends on the entity's existence, size, color, and physiological traits." [] [Term] id: METPO:1000189 name: obsolete system is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000190 name: obsolete microaerophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000604 [Term] id: METPO:1000191 name: obsolete mobile genetic element is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000192 name: obsolete moderate halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000623 [Term] id: METPO:1000193 name: obsolete morphological trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000194 name: obsolete motility process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000195 name: obsolete motility structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000196 name: obsolete mutualism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000197 name: obsolete mycolic acid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000198 name: obsolete mycorrhization is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000199 name: obsolete neutrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003001 [Term] id: METPO:1000200 name: obsolete nitrification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1005001 [Term] id: METPO:1000201 name: obsolete nitrogen fixation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1005039 [Term] id: METPO:1000202 name: obsolete nodulation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000203 name: obsolete nucleoid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000204 name: obsolete nutrient utilization is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000205 name: obsolete obligate is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000206 name: obsolete obligate aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000606 [Term] id: METPO:1000207 name: obsolete obligate anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000607 [Term] id: METPO:1000208 name: obsolete oospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000209 name: obsolete order is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000210 name: obsolete microbe characterized by growth conditions is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000211 name: obsolete microbe characterized by nutritional requirement is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000212 name: obsolete microbe characterized by product produced is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000213 name: obsolete microbe characterized by relation to oxygen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000214 name: obsolete microbe characterized by relation to ph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000215 name: obsolete microbe characterized by relation to pressure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000216 name: obsolete microbe characterized by relation to salt concentration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000217 name: obsolete microbe characterized by relation to temperature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000218 name: obsolete microbe characterized by shape is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000219 name: obsolete microbe characterized by trophic type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000220 name: obsolete osmophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000221 name: obsolete osmoregulation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000222 name: obsolete oxidative stress response is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000223 name: obsolete oxidoreductase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000224 name: obsolete oxygen requirement is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000225 name: obsolete oxygenic photosynthesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000226 name: obsolete pan-genome is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000227 name: obsolete parasitism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000228 name: obsolete passive transport is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000229 name: obsolete pathogenicity is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000230 name: obsolete pathogenicity island is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000231 name: obsolete peptidoglycan is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000232 name: pH delta is_a: METPO:1000531 ! pH phenotype with numerical limits is_a: METPO:1000534 ! delta phenotype with numerical limits [Term] id: METPO:1000233 name: obsolete pH optimum (growth range) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000234 name: obsolete pH preference is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000235 name: obsolete pH range (growth tolerance) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000236 name: obsolete pH tolerance is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000237 name: obsolete phage defense is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000238 name: obsolete photoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000656 [Term] id: METPO:1000239 name: obsolete photoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000657 [Term] id: METPO:1000240 name: obsolete photosynthesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000241 name: obsolete phototaxis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000242 name: obsolete phylum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000243 name: obsolete physiological process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000630 [Term] id: METPO:1000244 name: obsolete physiological state is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000245 name: obsolete physiological trait is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000246 name: obsolete piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000247 name: obsolete pigment is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000248 name: obsolete pigmentation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1003021 [Term] id: METPO:1000249 name: obsolete pilus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000250 name: obsolete plant growth promotion is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000251 name: obsolete plasmid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000252 name: obsolete pleomorphism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000253 name: obsolete process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000254 name: obsolete prophage is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000255 name: obsolete prostheca is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000256 name: obsolete protein synthesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000257 name: obsolete proteolysis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000258 name: obsolete prototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000259 name: obsolete psychrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000614 [Term] id: METPO:1000260 name: obsolete qualifier is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000261 name: obsolete quorum sensing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000262 name: obsolete regulation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000263 name: obsolete regulatory mechanism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000264 name: obsolete reproductive process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000265 name: obsolete reproductive structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000266 name: obsolete resistance mechanism is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000267 name: obsolete respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000800 [Term] id: METPO:1000268 name: obsolete restriction-modification system is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000269 name: obsolete ribosome is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000270 name: obsolete S-layer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000271 name: obsolete salinity delta is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000272 name: obsolete salinity preference is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000273 name: obsolete secondary metabolite is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000274 name: obsolete secretion is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000275 name: obsolete secretion system is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000276 name: obsolete sheathed is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000277 name: obsolete siderophore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000278 name: obsolete sigma factor is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000279 name: obsolete signaling is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000280 name: obsolete slime layer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000281 name: obsolete specialized cell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000282 name: obsolete species is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000283 name: obsolete spirillum is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000284 name: obsolete spirochete is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000285 name: obsolete sporangiospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000286 name: obsolete sporulation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000870 [Term] id: METPO:1000287 name: obsolete square cell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000288 name: obsolete stalk is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000289 name: obsolete star-shaped cell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000290 name: obsolete stationary phase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000291 name: obsolete storage structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000292 name: obsolete strain is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000293 name: obsolete stress response is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000294 name: obsolete structure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000295 name: obsolete sulfate reducer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000296 name: obsolete swarming is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000297 name: obsolete symbiosis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000298 name: obsolete symbiotic process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000299 name: obsolete syntrophy is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1002006 [Term] id: METPO:1000300 name: obsolete taxonomic identifier is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000301 name: obsolete taxonomic rank is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000302 name: obsolete teichoic acid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000303 name: temperature delta is_a: METPO:1000533 ! temperature phenotype with numerical limits is_a: METPO:1000534 ! delta phenotype with numerical limits [Term] id: METPO:1000304 name: temperature optimum def: "A temperature phenotype with numerical limits that represents the conditions at which an organism exhibits the most efficient growth and reproduction." [] {IAO:0000119="https://purl.dsmz.de/schema/OptimumTemperature"} is_a: METPO:1000533 ! temperature phenotype with numerical limits is_a: METPO:1000536 ! optimum phenotype with numerical limits property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000305 name: obsolete temperature preference is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000613 [Term] id: METPO:1000306 name: temperature range is_a: METPO:1000533 ! temperature phenotype with numerical limits is_a: METPO:1000535 ! growth range phenotype with numerical limits [Term] id: METPO:1000307 name: obsolete thermal tolerance is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000308 name: obsolete thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true replaced_by: METPO:1000616 [Term] id: METPO:1000309 name: obsolete toxin is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000310 name: obsolete transcription factor is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000311 name: obsolete transduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000312 name: obsolete transferase is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000313 name: obsolete transformation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000314 name: obsolete transport system is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000315 name: obsolete transposon is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000316 name: obsolete triangular cell is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000317 name: obsolete trichome is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000318 name: obsolete twitching motility is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000319 name: obsolete two-component system is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000320 name: obsolete viable but non-culturable is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000321 name: obsolete vibrio is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000322 name: obsolete virulence is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000323 name: obsolete virulence factor is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000324 name: obsolete virulence process is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000325 name: obsolete xylanolysis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000326 name: obsolete zoospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000327 name: obsolete zygospore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 OMO:0001000 is_obsolete: true [Term] id: METPO:1000328 name: obsolete pressure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000329 name: obsolete temperature optimum (metabolic activity) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000330 name: obsolete temperature range (metabolic viability) is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000331 name: pH optimum def: "A pH phenotype with numerical limits that represents the conditions at which an organism exhibits the most efficient growth and reproduction." [] is_a: METPO:1000531 ! pH phenotype with numerical limits is_a: METPO:1000536 ! optimum phenotype with numerical limits [Term] id: METPO:1000332 name: pH range is_a: METPO:1000531 ! pH phenotype with numerical limits is_a: METPO:1000535 ! growth range phenotype with numerical limits property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000333 name: NaCl optimum def: "A salinity phenotype with numerical limits that supports the most efficient growth and reproduction of an organism." [] {IAO:0000119="https://purl.dsmz.de/schema/OptimumSalinity"} is_a: METPO:1000532 ! salinity phenotype with numerical limits is_a: METPO:1000536 ! optimum phenotype with numerical limits property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000334 name: NaCl range is_a: METPO:1000532 ! salinity phenotype with numerical limits is_a: METPO:1000535 ! growth range phenotype with numerical limits property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000335 name: NaCl delta is_a: METPO:1000532 ! salinity phenotype with numerical limits is_a: METPO:1000534 ! delta phenotype with numerical limits [Term] id: METPO:1000336 name: obsolete psychrotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000618 [Term] id: METPO:1000337 name: obsolete thermotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000619 [Term] id: METPO:1000338 name: obsolete extreme thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000721 [Term] id: METPO:1000339 name: obsolete extreme hyperthermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000721 [Term] id: METPO:1000340 name: obsolete non-halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000624 [Term] id: METPO:1000341 name: obsolete slight halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000625 [Term] id: METPO:1000342 name: obsolete haloalkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000621 [Term] id: METPO:1000343 name: obsolete extreme acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000344 name: obsolete acid tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000345 name: obsolete alkali tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000346 name: obsolete extreme alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000347 name: obsolete facultative acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1003007 [Term] id: METPO:1000348 name: obsolete obligative acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1003006 [Term] id: METPO:1000349 name: obsolete facultative aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000608 [Term] id: METPO:1000350 name: obsolete microaerophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000604 [Term] id: METPO:1000351 name: obsolete microaerotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000610 [Term] id: METPO:1000352 name: obsolete aerotolerant anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000353 name: obsolete obligate aerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000606 [Term] id: METPO:1000354 name: obsolete obligate anaerobe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000607 [Term] id: METPO:1000355 name: obsolete oxygenic phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000356 name: obsolete anoxygenic phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000357 name: obsolete chemoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000635 [Term] id: METPO:1000358 name: obsolete chemoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000636 [Term] id: METPO:1000359 name: obsolete lithotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000649 [Term] id: METPO:1000360 name: obsolete organotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000655 [Term] id: METPO:1000361 name: obsolete phototroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000660 [Term] id: METPO:1000362 name: obsolete chemotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000641 [Term] id: METPO:1000363 name: obsolete oligotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000654 [Term] id: METPO:1000364 name: obsolete copiotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000642 [Term] id: METPO:1000365 name: obsolete lithoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000647 [Term] id: METPO:1000366 name: obsolete mixotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000652 [Term] id: METPO:1000367 name: obsolete lithoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000648 [Term] id: METPO:1000368 name: obsolete chemoorganoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000640 [Term] id: METPO:1000369 name: obsolete chemolithoautotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000637 [Term] id: METPO:1000370 name: obsolete methylotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000651 [Term] id: METPO:1000371 name: obsolete methanotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000650 [Term] id: METPO:1000372 name: obsolete hydrogenotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000646 [Term] id: METPO:1000373 name: obsolete hydrogen oxidizer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000374 name: obsolete hydrogen producer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000375 name: obsolete nitrogen fixer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000376 name: obsolete methanogen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000377 name: obsolete sulfur oxidizer is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000378 name: obsolete denitrifier is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000379 name: obsolete motile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000702 [Term] id: METPO:1000380 name: obsolete non-motile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000703 [Term] id: METPO:1000381 name: obsolete flagellated is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000704 [Term] id: METPO:1000382 name: obsolete peritrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000383 name: obsolete lophotrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000384 name: obsolete monotrichous is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000385 name: obsolete ciliated is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000386 name: obsolete gliding is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000706 [Term] id: METPO:1000387 name: obsolete twitching is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000388 name: obsolete sliding is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000389 name: obsolete myxospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000390 name: obsolete conidia is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000391 name: obsolete chlamydospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000392 name: obsolete sporocysts is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000393 name: obsolete hypnospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000394 name: obsolete gemmae is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000395 name: obsolete azygospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000396 name: obsolete aleuriospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000397 name: obsolete stylospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000398 name: obsolete sclerotia is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000399 name: obsolete teliospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000400 name: obsolete urediniospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000401 name: obsolete pycnidiospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000402 name: obsolete acriospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000403 name: obsolete aplanospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000404 name: obsolete statismospores is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000405 name: obsolete piezotolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000406 name: obsolete piezosensitive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000407 name: obsolete obligate barophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000408 name: obsolete facultative barophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000409 name: obsolete hyperbarophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000410 name: obsolete hypobarophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000411 name: obsolete atmospheric pressure-adapted is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000412 name: obsolete moderate piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000413 name: obsolete extreme piezophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000414 name: obsolete stenopiezic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000415 name: obsolete eurypiezic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000416 name: obsolete pressure-sensitive is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000417 name: obsolete pressure-resistant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000418 name: obsolete pressure-adapted is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000419 name: obsolete piezo-acidophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000420 name: obsolete piezo-alkaliphile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000421 name: obsolete piezo-halophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000422 name: obsolete piezo-psychrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000423 name: obsolete piezo-thermophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000424 name: obsolete piezo-lithoautotrophe is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000425 name: obsolete piezo-chemoheterotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000636 [Term] id: METPO:1000426 name: obsolete piezo-oligotroph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000427 name: obsolete piezo-endolithic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000428 name: obsolete piezo-tolerant is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000429 name: GC low synonym: "GC_<=42.65" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000127 ! GC content property_value: METPO:range_max "42.65" xsd:string [Term] id: METPO:1000430 name: GC mid1 synonym: "GC_42.65_57.0" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000127 ! GC content property_value: METPO:range_max "57" xsd:string property_value: METPO:range_min "42.65" xsd:string [Term] id: METPO:1000431 name: GC mid2 synonym: "GC_57.0_66.3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000127 ! GC content property_value: METPO:range_max "66.3" xsd:string property_value: METPO:range_min "57" xsd:string [Term] id: METPO:1000432 name: GC high synonym: "GC_>66.3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000127 ! GC content property_value: METPO:range_min "66.3" xsd:string [Term] id: METPO:1000433 name: obsolete cell width very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000887 [Term] id: METPO:1000434 name: obsolete cell width low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000882 [Term] id: METPO:1000435 name: obsolete cell width mid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000889 [Term] id: METPO:1000436 name: obsolete cell width high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000882 [Term] id: METPO:1000437 name: obsolete cell length very low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000883 [Term] id: METPO:1000438 name: obsolete cell length low is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000881 [Term] id: METPO:1000439 name: obsolete cell length mid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000885 [Term] id: METPO:1000440 name: obsolete cell length high is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000881 [Term] id: METPO:1000441 name: temperature optimum very low synonym: "Psychrophile" EXACT [] synonym: "TO_<=10" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000304 ! temperature optimum property_value: METPO:range_max "10" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000442 name: temperature optimum low synonym: "Psychrophile" EXACT [] synonym: "Psychrotolerant" EXACT [] synonym: "TO_10_to_22" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000304 ! temperature optimum property_value: METPO:range_max "22" xsd:string property_value: METPO:range_min "10" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000443 name: temperature optimum mid1 synonym: "mesophilic" EXACT [] synonym: "TO_22_to_27" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000304 ! temperature optimum property_value: METPO:range_max "27" xsd:string property_value: METPO:range_min "22" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000444 name: temperature optimum mid2 synonym: "mesophilic" EXACT [] synonym: "TO_27_to_30" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000304 ! temperature optimum property_value: METPO:range_max "30" xsd:string property_value: METPO:range_min "27" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000445 name: temperature optimum mid3 synonym: "mesophilic" EXACT [] synonym: "TO_30_to_34" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000304 ! temperature optimum property_value: METPO:range_max "34" xsd:string property_value: METPO:range_min "30" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000446 name: temperature optimum mid4 synonym: "mesophilic" EXACT [] synonym: "TO_34_to_40" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000304 ! temperature optimum property_value: METPO:range_max "40" xsd:string property_value: METPO:range_min "34" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000447 name: temperature optimum high synonym: "Thermophile" EXACT [] synonym: "TO_>40" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000304 ! temperature optimum property_value: METPO:range_min "40" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000448 name: temperature range very low synonym: "Psychrophile" EXACT [] synonym: "TR_<=10" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000306 ! temperature range property_value: METPO:range_max "10" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000449 name: temperature range low synonym: "Psychrophile" EXACT [] synonym: "Psychrotolerant" EXACT [] synonym: "TR_10_to_22" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000306 ! temperature range property_value: METPO:range_max "22" xsd:string property_value: METPO:range_min "10" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000450 name: temperature range mid1 synonym: "mesophilic" EXACT [] synonym: "TR_22_to_27" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000306 ! temperature range property_value: METPO:range_max "27" xsd:string property_value: METPO:range_min "22" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000451 name: temperature range mid2 synonym: "mesophilic" EXACT [] synonym: "TR_27_to_30" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000306 ! temperature range property_value: METPO:range_max "30" xsd:string property_value: METPO:range_min "27" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000452 name: temperature range mid3 synonym: "mesophilic" EXACT [] synonym: "TR_30_to_34" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000306 ! temperature range property_value: METPO:range_max "34" xsd:string property_value: METPO:range_min "30" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000453 name: temperature range mid4 synonym: "mesophilic" EXACT [] synonym: "TR_34_to_40" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000306 ! temperature range property_value: METPO:range_max "40" xsd:string property_value: METPO:range_min "34" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000454 name: temperature range high synonym: "Thermophile" EXACT [] synonym: "TR_>40" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000306 ! temperature range property_value: METPO:range_min "40" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000455 name: pH optimum low synonym: "Acid Tolerant" EXACT [] synonym: "Acidophile" EXACT [] synonym: "Extreme Acidophile" EXACT [] synonym: "Facultative acidophile" EXACT [] synonym: "Obligative acidophile" EXACT [] synonym: "pHO_0_to_6" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000331 ! pH optimum property_value: METPO:range_max "6" xsd:string property_value: METPO:range_min "0" xsd:string [Term] id: METPO:1000456 name: pH optimum mid1 synonym: "Alkali Tolerant" EXACT [] synonym: "Neutrophile" EXACT [] synonym: "pHO_6_to_7" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000331 ! pH optimum property_value: METPO:range_max "7" xsd:string property_value: METPO:range_min "6" xsd:string [Term] id: METPO:1000457 name: pH optimum mid2 synonym: "Alkali Tolerant" EXACT [] synonym: "Alkaliphile" EXACT [] synonym: "Neutrophile" EXACT [] synonym: "pHO_7_to_8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000331 ! pH optimum property_value: METPO:range_max "8" xsd:string property_value: METPO:range_min "7" xsd:string [Term] id: METPO:1000458 name: pH optimum high synonym: "Alkali Tolerant" EXACT [] synonym: "Alkaliphile" EXACT [] synonym: "Extreme Alkaliphile" EXACT [] synonym: "pHO_8_to_14" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000331 ! pH optimum property_value: METPO:range_max "14" xsd:string property_value: METPO:range_min "8" xsd:string [Term] id: METPO:1000459 name: pH range very low synonym: "Acid Tolerant" EXACT [] synonym: "Acidophile" EXACT [] synonym: "Extreme Acidophile" EXACT [] synonym: "Facultative acidophile" EXACT [] synonym: "Obligative acidophile" EXACT [] synonym: "pHR_0_to_4" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000332 ! pH range property_value: METPO:range_max "4" xsd:string property_value: METPO:range_min "0" xsd:string [Term] id: METPO:1000460 name: pH range low synonym: "Acid Tolerant" EXACT [] synonym: "Acidophile" EXACT [] synonym: "Facultative acidophile" EXACT [] synonym: "Obligative acidophile" EXACT [] synonym: "pHR_4_to_6" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000332 ! pH range property_value: METPO:range_max "6" xsd:string property_value: METPO:range_min "4" xsd:string [Term] id: METPO:1000461 name: pH range mid1 synonym: "Alkali Tolerant" EXACT [] synonym: "Facultative acidophile" EXACT [] synonym: "Neutrophile" EXACT [] synonym: "pHR_6_to_7" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000332 ! pH range property_value: METPO:range_max "7" xsd:string property_value: METPO:range_min "6" xsd:string [Term] id: METPO:1000462 name: pH range mid2 synonym: "Alkali Tolerant" EXACT [] synonym: "Alkaliphile" EXACT [] synonym: "Facultative acidophile" EXACT [] synonym: "Neutrophile" EXACT [] synonym: "pHR_7_to_8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000332 ! pH range property_value: METPO:range_max "8" xsd:string property_value: METPO:range_min "7" xsd:string [Term] id: METPO:1000463 name: pH range mid3 synonym: "Alkali Tolerant" EXACT [] synonym: "Alkaliphile" EXACT [] synonym: "Extreme Alkaliphile" EXACT [] synonym: "Facultative acidophile" EXACT [] synonym: "pHR_8_to_10" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000332 ! pH range property_value: METPO:range_max "10" xsd:string property_value: METPO:range_min "8" xsd:string [Term] id: METPO:1000464 name: pH range high synonym: "10_to_14" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "Alkali Tolerant" EXACT [] synonym: "Alkaliphile" EXACT [] synonym: "Extreme Alkaliphile" EXACT [] is_a: METPO:1000332 ! pH range property_value: METPO:range_max "14" xsd:string property_value: METPO:range_min "10" xsd:string [Term] id: METPO:1000465 name: NaCl optimum low synonym: "Halotolerant" EXACT [] synonym: "NaO_<=1" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "Non-halophile" EXACT [] is_a: METPO:1000333 ! NaCl optimum property_value: METPO:range_max "1" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000466 name: NaCl optimum mid1 synonym: "Halotolerant" EXACT [] synonym: "NaO_1_to_3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "Slight halophile" EXACT [] is_a: METPO:1000333 ! NaCl optimum property_value: METPO:range_max "3" xsd:string property_value: METPO:range_min "1" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000467 name: NaCl optimum mid2 synonym: "Halotolerant" EXACT [] synonym: "Moderate halophile" EXACT [] synonym: "NaO_3_to_8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000333 ! NaCl optimum property_value: METPO:range_max "8" xsd:string property_value: METPO:range_min "3" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000468 name: NaCl optimum high synonym: "Extreme halophile" EXACT [] synonym: "NaO_>8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000333 ! NaCl optimum property_value: METPO:range_min "8" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000469 name: NaCl range low synonym: "Halotolerant" EXACT [] synonym: "NaR_<=1" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "Non-halophile" EXACT [] is_a: METPO:1000334 ! NaCl range property_value: METPO:range_max "1" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000470 name: NaCl range mid1 synonym: "Halotolerant" EXACT [] synonym: "NaR_1_to_3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "Slight halophile" EXACT [] is_a: METPO:1000334 ! NaCl range property_value: METPO:range_max "3" xsd:string property_value: METPO:range_min "1" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000471 name: NaCl range mid2 synonym: "Halotolerant" EXACT [] synonym: "Moderate halophile" EXACT [] synonym: "NaR_3_to_8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000334 ! NaCl range property_value: METPO:range_max "8" xsd:string property_value: METPO:range_min "3" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000472 name: NaCl range high synonym: "Extreme halophile" EXACT [] synonym: "NaR_>8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000334 ! NaCl range property_value: METPO:range_min "8" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000473 name: pH delta very low synonym: "pHd_<=1" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000232 ! pH delta property_value: METPO:range_max "1" xsd:string [Term] id: METPO:1000474 name: pH delta low synonym: "pHd_1_2" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000232 ! pH delta property_value: METPO:range_max "2" xsd:string property_value: METPO:range_min "1" xsd:string [Term] id: METPO:1000475 name: pH delta mid1 synonym: "pHd_2_3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000232 ! pH delta property_value: METPO:range_max "3" xsd:string property_value: METPO:range_min "2" xsd:string [Term] id: METPO:1000476 name: pH delta mid2 synonym: "pHd_3_4" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000232 ! pH delta property_value: METPO:range_max "4" xsd:string property_value: METPO:range_min "3" xsd:string [Term] id: METPO:1000477 name: pH delta mid3 synonym: "pHd_4_5" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000232 ! pH delta property_value: METPO:range_max "5" xsd:string property_value: METPO:range_min "4" xsd:string [Term] id: METPO:1000478 name: pH delta high synonym: "pHd_5_9" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000232 ! pH delta property_value: METPO:range_max "9" xsd:string property_value: METPO:range_min "5" xsd:string [Term] id: METPO:1000479 name: NaCl delta low synonym: "Nad_<=1" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000335 ! NaCl delta property_value: METPO:range_max "1" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000480 name: NaCl delta mid1 synonym: "Nad_1_3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000335 ! NaCl delta property_value: METPO:range_max "3" xsd:string property_value: METPO:range_min "1" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000481 name: NaCl delta mid2 synonym: "Nad_3_8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000335 ! NaCl delta property_value: METPO:range_max "8" xsd:string property_value: METPO:range_min "3" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000482 name: NaCl delta high synonym: "Nad_>8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000335 ! NaCl delta property_value: METPO:range_min "8" xsd:string property_value: qudt:ucumCode "%" xsd:string [Term] id: METPO:1000483 name: temperature delta very low synonym: "Td_1_5" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000303 ! temperature delta property_value: METPO:range_max "5" xsd:string property_value: METPO:range_min "1" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000484 name: temperature delta low synonym: "Td_5_10" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000303 ! temperature delta property_value: METPO:range_max "10" xsd:string property_value: METPO:range_min "5" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000485 name: temperature delta mid1 synonym: "Td_10_20" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000303 ! temperature delta property_value: METPO:range_max "20" xsd:string property_value: METPO:range_min "10" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000486 name: temperature delta mid2 synonym: "Td_20_30" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000303 ! temperature delta property_value: METPO:range_max "30" xsd:string property_value: METPO:range_min "20" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000487 name: temperature delta high synonym: "Td_>30" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000303 ! temperature delta property_value: METPO:range_min "30" xsd:string property_value: qudt:ucumCode "Cel" xsd:string [Term] id: METPO:1000488 name: obsolete branched is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000489 name: obsolete coccobacillus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000490 name: obsolete crescent is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000491 name: obsolete curved is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000492 name: obsolete curved spiral is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000493 name: obsolete diplococcus is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000494 name: obsolete ellipsoidal is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000673 [Term] id: METPO:1000495 name: obsolete filament is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000496 name: obsolete fusiform is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000497 name: obsolete helical is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000498 name: obsolete irregular is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000499 name: obsolete oval is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000500 name: obsolete ovoid is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000501 name: obsolete pleomorphic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000502 name: obsolete ring is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000503 name: obsolete rod is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000504 name: obsolete sphere is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000505 name: obsolete spindle is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000506 name: obsolete spiral is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000507 name: obsolete star - dumbbell - pleomorphic is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000508 name: obsolete tailed is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000509 name: obsolete temperature adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000510 name: obsolete salinity adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000511 name: obsolete pH adaptation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000512 name: obsolete bacterial spore is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000513 name: obsolete pressure adaptation type is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000514 name: obsolete pressure tolerance range is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1007070 [Term] id: METPO:1000515 name: obsolete sensitivity to oxygen is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000516 name: obsolete sensitivity toward is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000517 name: obsolete size is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000518 name: obsolete 1-D extent is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000519 name: obsolete width is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000520 name: obsolete length is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000521 name: obsolete sensitivity toward pressure is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000522 name: obsolete sensitivity toward nacl is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000523 name: obsolete sensitivity toward ph is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000524 name: obsolete sensitivity toward temperature is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000525 name: microbe def: "A material entity that is too small to be viewed by the unaided eye, typically requiring microscopy for observation." [] {IAO:0000119="OHMI:0000460"} comment: METPO is primarily concerned with unicellular, prokaryotic life forms, i.e. bacteria and archaea, including the cases of giant bacteria like Thiomargarita is_a: METPO:1000186 ! material entity property_value: IAO:0000117 "Luke Wang" xsd:string property_value: skos:closeMatch https://biolink.github.io/biolink-model/OrganismTaxon [Term] id: METPO:1000526 name: chemical entity def: "A material entity that is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances." [] {IAO:0000119="CHEBI:24431"} is_a: METPO:1000186 ! material entity property_value: skos:closeMatch https://biolink.github.io/biolink-model/ChemicalEntity [Term] id: METPO:1000527 name: enzyme is_a: METPO:1000186 ! material entity [Term] id: METPO:1000528 name: obsolete structured susceptibility detail is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000529 name: obsolete facultative psychrophile is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000720 [Term] id: METPO:1000531 name: pH phenotype with numerical limits def: "A phenotype characterized by specific pH values or ranges that define growth or activity limits." [] is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000532 name: salinity phenotype with numerical limits def: "A phenotype characterized by specific salt concentration values or ranges that define growth or activity limits." [] is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000533 name: temperature phenotype with numerical limits def: "A phenotype characterized by specific temperature values or ranges that define growth or activity limits." [] is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000534 name: delta phenotype with numerical limits def: "A phenotype characterized by the difference between maximum and minimum values of a growth parameter." [] is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000535 name: growth range phenotype with numerical limits def: "A phenotype characterized by the span of values within which an organism can maintain growth." [] is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000536 name: optimum phenotype with numerical limits def: "A phenotype characterized by the value at which an organism exhibits maximum growth rate or activity." [] is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000601 name: oxygen preference def: "A phenotype that is relating to an organism's oxygen requirements or tolerance for growth." [] {IAO:0000119="UPHENO:0049673", IAO:0000119="https://purl.dsmz.de/schema/OxygenTolerance"} synonym: "metabolism" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "oxygen preference" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "Physiology and metabolism.oxygen tolerance.oxygen tolerance" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000602 name: aerobic def: "An oxygen preference in which growth occurs in the presence of molecular oxygen (O2), typically using O2 as the terminal electron acceptor." [] {IAO:0000119="ECOCORE:00000173", IAO:0000119="OMP:0005253"} synonym: "aerobe" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "aerobic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "Ox_aerobic" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000603 name: anaerobic def: "An oxygen preference in which growth occurs in the absence of molecular oxygen (O2)." [] {IAO:0000119="MICRO:0000495"} synonym: "anaerobe" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "anaerobic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "Ox_anaerobic" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000604 name: microaerophilic def: "An oxygen preference that requires molecular oxygen (O2) at concentrations lower than atmospheric." [] {IAO:0000119="ECOCORE:00000180", IAO:0000119="OMP:0005254", IAO:0000119="MICRO:0000515"} synonym: "microaerophile" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "microaerophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "Ox_microerophile" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000605 name: facultatively anaerobic def: "An oxygen preference in which growth can occur with or without molecular oxygen (O2)." [] {IAO:0000119="OMP:0000087", IAO:0000119="MICRO:0001520"} synonym: "facultative" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "facultative anaerobe" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "facultative anaerobe" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000606 name: obligately aerobic def: "An aerobic phenotype that requires molecular oxygen (O2) for growth." [] {IAO:0000119="MICRO:0000516"} synonym: "obligate aerobe" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "obligate aerobic" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "obligate aerobic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000602 ! aerobic [Term] id: METPO:1000607 name: obligately anaerobic def: "An anaerobic phenotype in which molecular oxygen (O2) inhibits or prevents growth." [] {IAO:0000119="MICRO:0000504"} synonym: "obligate anaerobe" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "obligate anaerobic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000603 ! anaerobic [Term] id: METPO:1000608 name: facultatively aerobic def: "An oxygen preference in which growth can occur without oxygen but is capable of aerobic growth." [] {IAO:0000119="OMP:0000087", IAO:0000119="ECOCORE:00000177"} synonym: "facultative" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "facultative aerobe" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000609 name: aerotolerant def: "An oxygen preference that does not use O2 for growth but tolerates its presence." [] {IAO:0000119="MICRO:0000502"} synonym: "aerotolerant" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "aerotolerant" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000610 name: microaerotolerant def: "An oxygen preference that tolerates low levels of molecular oxygen (O2) without requiring it." [] {IAO:0000119="ECOCORE:00000180", IAO:0000119="ECOCORE:00000181", IAO:0000119="OMP:0000087", IAO:0000119="OMP:0000105"} synonym: "microaerotolerant" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000611 name: strictly anaerobic def: "An obligately anaerobic where a microorganism does not grow in the presence of oxygen gas (O2)." [] {IAO:0000119="OMP:0000184"} synonym: "obligate anaerobic" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "strictly anaerobic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000607 ! obligately anaerobic [Term] id: METPO:1000612 name: facultative oxygen preference def: "An oxygen preference that describes a microorganism that can grow with or without molecular oxygen." [] {IAO:0000119="OMP:0000087"} synonym: "Ox_facultative_aerobe_anaerobe" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1000613 name: temperature preference def: "A phenotype that describes characteristic growth with respect to environmental temperature." [] {IAO:0000119="OMP:0005002"} synonym: "Physiology and metabolism.culture temp.temperature" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "range_tmp" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "temperature preference" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000614 name: psychrophilic def: "A temperature preference in which growth is favored at low temperatures, typically near or below ~15 C." [] {IAO:0000119="MICRO:0001306"} synonym: "psychrophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "psychrophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "psychrophilic" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000613 ! temperature preference [Term] id: METPO:1000615 name: mesophilic def: "A temperature preference in which growth is favored at intermediate temperatures, typically ~20-45 C." [] {IAO:0000119="MICRO:0000111"} synonym: "mesophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "mesophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000613 ! temperature preference [Term] id: METPO:1000616 name: thermophilic def: "A temperature preference in which growth is favored at elevated temperatures, typically >=45 C." [] {IAO:0000119="OMP:0005003", IAO:0000119="OMP:0005004", IAO:0000119="MICRO:0000118"} synonym: "thermophilic" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "thermophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "thermophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000613 ! temperature preference [Term] id: METPO:1000617 name: hyperthermophilic def: "A temperature preference in which growth is favored at very high temperatures, typically >=80 C." [] {IAO:0000119="MICRO:0001538"} synonym: "extreme thermophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "hyperthermophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000613 ! temperature preference [Term] id: METPO:1000618 name: psychrotolerant def: "A temperature preference in which growth can occur at low temperatures without an obligate low-temperature preference." [] {IAO:0000119="MICRO:0001310", IAO:0000119="OMP:0005007", IAO:0000119="OMP:0005006"} synonym: "psychrotolerant" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000613 ! temperature preference [Term] id: METPO:1000619 name: thermotolerant def: "A temperature preference in which growth can occur at elevated temperatures without an obligate high-temperature preference." [] {IAO:0000119="MICRO:0001286"} synonym: "thermotolerant" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000613 ! temperature preference [Term] id: METPO:1000620 name: halophilic def: "A halophily preference in which an organism requires high concentrations of salt for growth and survival." [] {IAO:0000119="GO:0170002", IAO:0000119="OMP:0005016", IAO:0000119="MICRO:0001315", IAO:0000119="MICRO:0001314"} synonym: "halophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "halophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000629 ! halophily preference [Term] id: METPO:1000621 name: haloalkaliphilic def: "A halophily preference in which an organism requires both high salt concentrations and alkaline pH for optimal growth." [] {IAO:0000119="MICRO:0001392", IAO:0000119="MICRO:0001554", IAO:0000119="OMP:0005011", IAO:0000119="MICRO:0001314"} synonym: "haloalkaliphilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000629 ! halophily preference [Term] id: METPO:1000622 name: halotolerant def: "A halophily preference in which an organism can tolerate high salt concentrations but does not require them for growth." [] {IAO:0000119="MICRO:0001316"} synonym: "halotolerant" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "halotolerant" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000629 ! halophily preference [Term] id: METPO:1000623 name: moderately halophilic def: "A halophilic phenotype in which an organism requires high levels of sodium chloride, usually above or about 0.2 M." [] {IAO:0000119="OMP:0005016"} synonym: "moderate-halophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "moderately halophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000620 ! halophilic property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000624 name: non halophilic def: "A halophily preference in which an organism does not require or prefer elevated salt concentrations for growth." [] synonym: "non-halophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "non-halophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000629 ! halophily preference [Term] id: METPO:1000625 name: slightly halophilic def: "A halophilic phenotype in which an organism requires low to moderate salt concentrations (0.3 to 0.8 M NaCl) for optimal growth." [] {IAO:0000119="OMP:0005016"} synonym: "slightly halophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000620 ! halophilic [Term] id: METPO:1000626 name: stenohaline def: "A halophily preference in which an organism can only tolerate a narrow range of salinity concentrations and cannot survive significant changes in environmental salt levels." [] {IAO:0000119="https://purl.dsmz.de/schema/SaltTolerance"} synonym: "stenohaline" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000629 ! halophily preference property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000627 name: euryhaline def: "A halophily preference in which an organism can tolerate a wide range of salinity conditions." [] synonym: "euryhaline" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000629 ! halophily preference [Term] id: METPO:1000628 name: extremely halophilic def: "A halophilic phenotype in which an organism requires very high salt concentrations (typically 15-30% NaCl or higher) for optimal growth and cannot grow at salt concentrations below approximately 12%." [] {IAO:0000119="OMP:0005016", IAO:0000119="MICRO:0001314"} synonym: "extreme-halophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "extremely halophilic" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000620 ! halophilic property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000629 name: halophily preference def: "A phenotype that is relating to an organism's salt concentration requirements or tolerance for growth." [] {IAO:0000119="https://purl.dsmz.de/schema/SaltTolerance", IAO:0000119="OMP:0005016"} synonym: "Physiology and metabolism.halophily.halophily level" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "range_salinity" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "salinity preference" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000630 name: biological process def: "A execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence." [] [Term] id: METPO:1000631 name: trophic type def: "A phenotype that is describing how an organism obtains carbon and energy for growth and metabolism." [] synonym: "nutritional type" RELATED [] synonym: "pathways" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "Physiology and metabolism.nutrition type.type" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000632 name: autotrophic def: "A trophic type in which an organism produces organic compounds from inorganic carbon sources (primarily carbon dioxide or bicarbonate) using energy from light (photoautotrophy) or from the oxidation of inorganic compounds (chemoautotrophy)." [] {IAO:0000119="ECOCORE:00000009", IAO:0000119="MICRO:0001456"} synonym: "autotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "autotrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "TT_autotroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000633 name: carboxydotrophic def: "A trophic type in which an organism derives energy from the oxidation of carbon monoxide." [] is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000634 name: chemoautolithotrophic def: "A trophic type in which an organism uses chemical oxidation of inorganic compounds as the energy source and carbon dioxide as the primary carbon source for biosynthesis." [] {IAO:0000119="ECOCORE:00000129", IAO:0000119="ECOCORE:00000124", IAO:0000119="ECOCORE:00000123", IAO:0000119="OMP:0007111", IAO:0000119="OMP:0007110"} synonym: "chemoautolithotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000635 name: chemoautotrophic def: "A trophic type in which an organism obtains energy from oxidation of inorganic compounds and carbon from carbon dioxide." [] {IAO:0000119="ECOCORE:00000129", IAO:0000119="MICRO:0001480", IAO:0000119="ECOCORE:00000123", IAO:0000119="OMP:0007111", IAO:0000119="OMP:0007110"} synonym: "chemoautotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000636 name: chemoheterotrophic def: "A trophic type in which an organism obtains both energy and carbon from organic compounds." [] {IAO:0000119="ECOCORE:00000012", IAO:0000119="ECOCORE:00000132", IAO:0000119="OMP:0007111", IAO:0000119="OMP:0007110", IAO:0000119="ECOCORE:00000127"} synonym: "aerobic_chemo_heterotrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "chemoheterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000637 name: chemolithoautotrophic def: "A trophic type in which an organism obtains energy from oxidation of inorganic compounds (lithotrophy) and carbon from carbon dioxide." [] {IAO:0000119="MICRO:0000511"} synonym: "chemolithoautotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000638 name: chemolithoheterotrophic def: "A trophic type characterized by the use of inorganic chemical compounds as electron donors for energy generation while utilizing organic compounds as the primary carbon source." [] {IAO:0000119="MICRO:0001478", IAO:0000119="MICRO:0000512"} synonym: "chemolithoheterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000639 name: chemolithotrophic def: "A trophic type characterized by the use of inorganic chemical compounds as electron donors and carbon dioxide as the primary carbon source for energy generation and biosynthesis." [] {IAO:0000119="MICRO:0001499", IAO:0000119="OMP:0007110"} synonym: "chemolithotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000640 name: chemoorganoheterotrophic def: "A trophic type in which an organism obtains both energy and carbon from organic compounds through oxidation." [] {IAO:0000119="MICRO:0001481", IAO:0000119="MICRO:0000514", IAO:0000119="OMP:0007111", IAO:0000119="ECOCORE:00000127", IAO:0000119="MICRO:0001479"} synonym: "chemoorganoheterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000641 name: chemotrophic def: "A trophic type in which an organism obtains energy from chemical oxidation of either inorganic or organic compounds." [] {IAO:0000119="MICRO:0001458"} synonym: "chemotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "TT_chemotroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000642 name: copiotrophic def: "A nutrient adaptation in which an organism thrives in environments with high nutrient concentrations, typically exhibiting rapid growth rates and utilizing diverse carbon sources." [] synonym: "copiotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000731 ! nutrient adaptation property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000643 name: obsolete denitrifying is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000644 name: heterotrophic def: "A trophic type in which an organism obtains carbon from organic compounds rather than from carbon dioxide." [] {IAO:0000119="MICRO:0001474"} synonym: "aerobic_heterotrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "heterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "heterotrophic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "TT_heterotroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000645 name: obsolete hydrogen-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000646 name: hydrogenotrophic def: "A trophic type in which an organism uses molecular hydrogen as an electron donor for energy generation and carbon dioxide as the primary carbon source." [] is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000647 name: lithoautotrophic def: "A trophic type in which an organism obtains energy from inorganic electron donors and carbon from carbon dioxide." [] {IAO:0000119="ECOCORE:00000009", IAO:0000119="MICRO:0001483", IAO:0000119="ECOCORE:00000122", IAO:0000119="ECOCORE:00000014", IAO:0000119="MICRO:0001477"} synonym: "lithoautotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000648 name: lithoheterotrophic def: "A trophic type in which an organism obtains energy from the oxidation of inorganic compounds while using organic compounds as the primary carbon source for biosynthesis." [] {IAO:0000119="ECOCORE:00000162", IAO:0000119="MICRO:0001459", IAO:0000119="ECOCORE:00000014", IAO:0000119="MICRO:0001478", IAO:0000119="OMP:0007110"} synonym: "lithoheterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000649 name: lithotrophic def: "A trophic type in which an organism uses inorganic compounds as electron donors for energy generation." [] {IAO:0000119="MICRO:0001459"} synonym: "lithotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "TT_lithotroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000650 name: methanotrophic def: "A trophic type in which an organism uses methane as the primary carbon and energy source through oxidation of methane to carbon dioxide." [] synonym: "methanotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000651 name: methylotrophic def: "A trophic type in which an organism obtains energy and carbon from reduced one-carbon compounds." [] synonym: "methylotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "methylotrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "TT_methylotroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000652 name: mixotrophic def: "A trophic type in which an organism can use both organic and inorganic carbon sources for growth." [] {IAO:0000119="MICRO:0001475"} synonym: "mixotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000653 name: obsolete nitrogen-fixing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1005039 [Term] id: METPO:1000654 name: oligotrophic def: "A nutrient adaptation characterized by the ability to thrive in environments with very low nutrient concentrations, typically possessing efficient nutrient uptake and utilization systems." [] {IAO:0000119="ENVO:01000774", IAO:0000119="ENVO:00002223"} synonym: "oligotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "TT_oligotroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000731 ! nutrient adaptation property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000655 name: organotrophic def: "A trophic type in which an organism obtains energy from the oxidation of organic compounds." [] {IAO:0000119="ECOCORE:00000162", IAO:0000119="OMP:0007111"} synonym: "organotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "TT_organotroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000656 name: photoautotrophic def: "A trophic type characterized by the use of light as the energy source and carbon dioxide as the primary carbon source for biosynthesis." [] {IAO:0000119="MICRO:0001483", IAO:0000119="OMP:0006008", IAO:0000119="ECOCORE:00000121", IAO:0000119="ECOCORE:00000017", IAO:0000119="MICRO:0001457"} synonym: "anoxygenic_photoautotrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "anoxygenic_photoautotrophy_hydrogen_oxidation" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "anoxygenic_photoautotrophy_iron_oxidation" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "anoxygenic_photoautotrophy_sulfur_oxidation" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "photoautotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "photoautotrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000657 name: photoheterotrophic def: "A trophic type in which an organism uses light as the energy source and organic compounds as the primary carbon source for biosynthesis." [] {IAO:0000119="ECOCORE:00000131"} synonym: "photoheterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "photoheterotrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000658 name: photolithotrophic def: "A trophic type in which an organism uses light as the energy source and inorganic compounds as electron donors, typically with carbon dioxide as the primary carbon source." [] {IAO:0000119="MICRO:0001482"} synonym: "photolithotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000659 name: photoorganoheterotrophic def: "A trophic type in which an organism obtains energy from light and carbon from organic compounds." [] {IAO:0000119="MICRO:0000510"} synonym: "photoorganoheterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000660 name: phototrophic def: "A trophic type characterized by the use of light as the primary energy source for metabolic processes, regardless of carbon source." [] {IAO:0000119="OMP:0007064", IAO:0000119="MICRO:0001457"} synonym: "aerobic_anoxygenic_phototrophy" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "phototroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "TT_phototroph" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000661 name: obsolete sulfate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000662 name: obsolete sulfur-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000663 name: chemoorganotrophic def: "A trophic type in which an organism obtains energy through chemical oxidation of organic compounds that also serve as the carbon source for biosynthesis." [] {IAO:0000119="OMP:0007111"} synonym: "chemoorganotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000664 name: organoheterotrophic def: "A trophic type characterized by the use of organic compounds as both electron donors and primary carbon sources for energy generation and biosynthesis." [] {IAO:0000119="ECOCORE:00000162", IAO:0000119="ECOCORE:00000121", IAO:0000119="ECOCORE:00000126", IAO:0000119="ECOCORE:00000125", IAO:0000119="ECOCORE:00000127"} synonym: "organoheterotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000665 name: photolithoautotrophic def: "A trophic type in which an organism obtains energy from light and carbon from carbon dioxide using inorganic electron donors." [] {IAO:0000119="MICRO:0000500"} synonym: "photolithoautotroph" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000631 ! trophic type [Term] id: METPO:1000666 name: cell shape def: "A phenotype that describes the characteristic three-dimensional morphological form of a microbial cell, determined by cell wall structure, cytoskeletal elements, and environmental factors." [] {IAO:0000119="OMP:0000073"} synonym: "cell shape" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "cell_shape" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "Morphology.cell morphology.cell shape" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000667 name: bacillus shaped def: "A cell shape characterized by an elongated, rod cylindrical morphology with relatively parallel sides and rounded ends." [] {IAO:0000119="OMP:0000076"} synonym: "bacillus" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000668 name: coccus shaped def: "A cell shape in which an organism has a spherical or nearly spherical morphology, with roughly equal dimensions in all directions." [] {IAO:0000119="OMP:0000075", IAO:0000119="OMP:0000123", IAO:0000119="MICRO:0000402"} synonym: "coccus" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "coccus-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000669 name: crescent shaped synonym: "crescent-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000670 name: curved shaped synonym: "curved-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "S_curved_spiral" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000671 name: diplococcus shaped def: "A cell shape in which spherical cells remain attached in pairs following cell division, forming characteristic doublets." [] {IAO:0000119="OMP:0000117"} synonym: "diplococcus-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000672 name: dumbbell shaped synonym: "dumbbell-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "S_star_dumbbell_pleomorphic" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000673 name: ellipsoidal def: "A cell shape in which an organism has an oval or ellipse morphology, elongated along one axis with rounded ends, intermediate between spherical and rod-shaped." [] {IAO:0000119="PATO:0000947"} synonym: "ellipsoidal" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000674 name: filament shaped synonym: "filament" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "filament-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "S_filament" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000675 name: flask shaped synonym: "flask" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "flask-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000676 name: helical shaped synonym: "helical-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000677 name: ovoid shaped def: "A cell shape in which an organism has an oval morphology, rounded at both ends with one end often slightly broader than the other." [] {IAO:0000119="PATO:0001891"} synonym: "ovoid-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "S_ovoid" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000678 name: oval shaped def: "A cell shape characterized by an ellipsoidal morphology with rounded ends, resembling an elongated sphere." [] {IAO:0000119="OMP:0007100"} synonym: "oval-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000679 name: pleomorphic shaped def: "A cell shape characterized by variable and irregular morphology, where individual cells within a population exhibit multiple distinct shapes." [] {IAO:0000119="OMP:0000132"} synonym: "pleomorphic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "pleomorphic-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "S_star_dumbbell_pleomorphic" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000680 name: ring shaped def: "A cell shape in which an organism forms circular or toroidal structures." [] {IAO:0000119="PATO:0002539"} synonym: "ring" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "ring-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000681 name: rod shaped def: "A cell shape in which an organism has an elongated, cylindrical morphology with relatively straight sides and rounded or flat ends." [] {IAO:0000119="OMP:0000076"} synonym: "rod-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "S_rod" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000682 name: spore shaped synonym: "spore-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000683 name: sphere shaped synonym: "S_sphere" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "sphere-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000684 name: spiral shaped synonym: "S_curved_spiral" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "spiral" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "spiral-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000685 name: star shaped def: "A cell shape in which an organism has multiple radiating projections from a central body." [] {IAO:0000119="OMP:0000130", IAO:0000119="PATO:0002065"} synonym: "S_star_dumbbell_pleomorphic" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "star" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "star-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000686 name: vibrio shaped def: "A cell shape in which an organism has a curved rod or comma morphology, characterized by a short curved cylindrical form with a single arc." [] {IAO:0000119="OMP:0000086", IAO:0000119="OMP:0000077"} synonym: "vibrio" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "vibrio-shaped" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000687 name: branched shaped synonym: "branced" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000688 name: coccobacillus shaped synonym: "coccobacillus" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000689 name: disc shaped def: "A cell shape in which an organism is flat and circular." [] synonym: "disc" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000690 name: fusiform shaped def: "A cell shape that is wide in the middle and tapers at both ends." [] {IAO:0000119="PATO:0002400"} synonym: "fusiform" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000691 name: irregular shaped synonym: "irregular" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000692 name: spindle shaped synonym: "spindle" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000693 name: spirochete shaped def: "A cell shape in which an organism has an elongated, tightly coiled helical morphology with periplasmic flagella (endoflagella) located between the cell wall and outer membrane." [] {IAO:0000119="OMP:0000086", IAO:0000119="OMP:0000124", IAO:0000119="OMP:0000125"} synonym: "spirochete" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000694 name: square shaped synonym: "square" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000695 name: tailed shaped synonym: "tailed" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000696 name: triangular shaped synonym: "triangular" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000666 ! cell shape [Term] id: METPO:1000697 name: gram stain def: "A phenotype where microorganisms are grouped based on their ability to retain crystal violet dye in the Gram staining procedure." [] {IAO:0000119="OMP:0000191"} synonym: "gram_stain" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "Morphology.cell morphology.gram stain" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000698 name: gram positive def: "A gram stain in which an organism retains crystal violet dye and appears purple under microscopy due to a thick peptidoglycan cell wall." [] {IAO:0000119="OMP:0000188", IAO:0000119="https://purl.dsmz.de/schema/GramPositiveBacteria"} synonym: "G_positive" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "gram positive" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "positive" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "positive" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000697 ! gram stain [Term] id: METPO:1000699 name: gram negative def: "A gram stain in which bacteria do not retain crystal violet dye and appear pink or red after staining, indicating a thin peptidoglycan layer and presence of an outer membrane." [] synonym: "G_negative" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "gram negative" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "negative" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "negative" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000697 ! gram stain property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000700 name: gram variable def: "A gram stain in which bacteria from the same culture show both gram-positive and gram-negative staining characteristics, often due to age of culture or cell wall degradation." [] {IAO:0000119="OMP:0000190"} synonym: "variable" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000697 ! gram stain property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000701 name: motility def: "A phenotype in which an organism has the capability to move independently through its environment, typically by means of flagella, pili, gliding mechanisms, or other locomotory structures." [] {IAO:0000119="OMP:0000001"} synonym: "Morphology.cell morphology.motility" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "motility" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "presence of motility" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000702 name: motile def: "A motility in which an organism has the ability to move independently using metabolic energy." [] {IAO:0000119="CL:0000219", IAO:0000119="OMP:0000005"} synonym: "motile" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "yes" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "yes" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000701 ! motility [Term] id: METPO:1000703 name: non motile def: "A motility in which an organism lacks the ability to move independently under its own power." [] {IAO:0000119="OMP:0007489", IAO:0000119="OMP:0007488", IAO:0000119="OMP:0000133", IAO:0000119="UPHENO:0034076", IAO:0000119="OMP:0007490"} synonym: "no" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "no" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "non-motile" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000701 ! motility [Term] id: METPO:1000704 name: flagellated def: "A motile in which an organism possesses flagella for locomotion." [] {IAO:0000119="MICRO:0000272", IAO:0000119="CL:0011016", IAO:0000119="OMP:0000029", IAO:0000119="GO:0030317"} synonym: "flagella" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000702 ! motile [Term] id: METPO:1000705 name: axially filamented def: "A motile in which the flagellum filament of an organism is located in the periplasm and does not extend past the cell envelope." [] {IAO:0000119="OMP:0000023", IAO:0000119="GO:0055040"} synonym: "axial filament" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000702 ! motile property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000706 name: gliding def: "A motile in which an organism moves smoothly along solid surfaces without flagella or pili." [] {IAO:0000119="OMP:0000112", IAO:0000119="GO:0071976", IAO:0000119="MICRO:0000437"} synonym: "gliding" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000702 ! motile [Term] id: METPO:1000720 name: facultative psychrophilic def: "A temperature preference characterized by the ability to grow at low temperatures (typically below 20C) while maintaining optimal growth at moderate temperatures." [] {IAO:0000119="OMP:0005007", IAO:0000119="MICRO:0001306", IAO:0000119="MICRO:0001417"} synonym: "facultative psychrophile" RELATED [] synonym: "facultative psychrophilic" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000613 ! temperature preference property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000721 name: extreme hyperthermophilic def: "A hyperthermophilic phenotype in which an organism grows optimally at temperatures above 90 C." [] {IAO:0000119="ENVO:00002027", IAO:0000119="OMP:0005003", IAO:0000119="MICRO:0001294", IAO:0000119="MICRO:0001538"} synonym: "extreme hyperthermophile" RELATED [] synonym: "extremely hyperthermophilic" RELATED [] is_a: METPO:1000617 ! hyperthermophilic [Term] id: METPO:1000731 name: nutrient adaptation def: "A trophic type that involves an organism's physiological and metabolic adaptations to specific nutrient availability." [] {IAO:0000119="PHIPO:0001216"} is_a: METPO:1000631 ! trophic type property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000800 name: respiration def: "A metabolism that is characterized by the method of performing cellular respiration, distinguished primarily by the specific terminal electron acceptor utilized for producing cellular energy." [] {IAO:0000119="GO:0045333", IAO:0000119="GO:0009060"} synonym: "pathways" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "respiration" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000801 name: Aerobic respiration def: "A respiration in which molecular oxygen serves as the terminal electron acceptor in the electron transport chain, generating ATP through oxidative phosphorylation with water as the final product." [] {IAO:0000119="GO:0009060"} synonym: "Oxic respiration" RELATED [] synonym: "Oxygen respiration" RELATED [] is_a: METPO:1000800 ! respiration property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000802 name: Anaerobic respiration def: "A respiration in which an organism uses electron acceptors other than oxygen for energy production." [] {IAO:0000119="GO:0009061"} synonym: "Anoxic respiration" RELATED [] synonym: "Dissimilatory respiration (non-O2)" RELATED [] is_a: METPO:1000800 ! respiration [Term] id: METPO:1000803 name: Oxidative phosphorylation def: "A metabolism that generates ATP through the transfer of electrons from electron donors to electron acceptors via redox reactions, coupled to the pumping of protons across a membrane to create an electrochemical gradient." [] {IAO:0000119="GO:0006119"} is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1000804 name: Substrate-level phosphorylation def: "A metabolism in which ATP is formed directly by transfer of a phosphoryl group from a substrate to ADP." [] is_a: METPO:1000060 ! metabolism [Term] id: METPO:1000805 name: Electron transfer def: "A metabolism in which electrons are transferred from an electron donor to an electron acceptor." [] {IAO:0000119="GO:0009055"} is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000806 name: Disproportionation def: "A metabolism in which a single substrate simultaneously undergoes both oxidation and reduction reactions, with part of the substrate serving as the electron donor and another part serving as the electron acceptor." [] is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000807 name: obsolete Nitrogen compound respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000808 name: obsolete Nitrate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000809 name: obsolete Denitrification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1005038 [Term] id: METPO:1000810 name: obsolete Dissimilatory nitrate reduction to ammonium is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000811 name: obsolete Nitrite reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000812 name: obsolete Anaerobic ammonium oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000813 name: obsolete Nitric oxide reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000814 name: obsolete Nitrous oxide reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000815 name: obsolete Sulfur and sulfoxide compound respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000816 name: obsolete Sulfate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000817 name: obsolete Sulfur reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000818 name: obsolete Sulfite reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000819 name: obsolete Thiosulfate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000820 name: obsolete Sulfoxide respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000821 name: obsolete Dimethyl sulfoxide respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000822 name: obsolete Methionine sulfoxide respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000823 name: obsolete Sulfide oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000824 name: obsolete Thiosulfate oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000825 name: obsolete Sulfite oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000826 name: obsolete Tetrathionate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000827 name: obsolete Polysulfide reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000828 name: obsolete Metal and metalloid respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000829 name: obsolete Iron reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000830 name: obsolete Iron oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000831 name: obsolete Nitrate-dependent Fe(II) oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000832 name: obsolete Manganese reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000833 name: obsolete Manganese oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000834 name: obsolete Uranium reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000835 name: obsolete Vanadium reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000836 name: obsolete Chromium reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000837 name: obsolete Technetium reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000838 name: obsolete Cobalt reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000839 name: obsolete Arsenate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000840 name: obsolete Arsenite oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000841 name: obsolete Selenate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000842 name: obsolete Selenite reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000843 name: obsolete Carbon and organic compound respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000844 name: Methanogenesis def: "A metabolism in which methane is produced as the primary end product through the reduction of carbon-containing compounds, formate, methanol, or acetate, exclusively performed by methanogenic archaea under strictly anaerobic conditions." [] {IAO:0000119="GO:0015948"} synonym: "Biological methanation" RELATED [] synonym: "Biomethanation" RELATED [] synonym: "Carbonate respiration" RELATED [] synonym: "methanogenesis" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1000845 name: Acetogenesis def: "A metabolism that produces acetate as the primary end product through the reduction of carbon dioxide or other carbon compounds using the Wood-Ljungdahl pathway, typically performed by acetogenic bacteria under anaerobic conditions." [] synonym: "Acetate fermentation" RELATED [] synonym: "acetogenesis" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1000846 name: Homoacetogenesis def: "A metabolism in which acetate is produced as the sole reduced end product from reduction of CO2 via the acetyl-CoA pathway." [] synonym: "Reductive acetyl-CoA pathway" RELATED [] synonym: "Wood-Ljungdahl pathway" RELATED [] is_a: METPO:1000060 ! metabolism [Term] id: METPO:1000847 name: obsolete Fumarate respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000848 name: obsolete Trimethylamine N-oxide respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000849 name: obsolete Humus respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000850 name: obsolete Halogenated compound respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000851 name: obsolete Organohalide respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000852 name: obsolete (Per)chlorate respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000853 name: obsolete Perchlorate respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000854 name: obsolete Chlorate respiration is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000855 name: obsolete Bromate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000856 name: obsolete Iodate reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000857 name: obsolete Nitrite-dependent methane oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000858 name: obsolete Nitrate-dependent methane oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000859 name: obsolete Hydrogen oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000860 name: obsolete Sulfur oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000861 name: obsolete Nitrification is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1005001 [Term] id: METPO:1000862 name: obsolete Complete ammonia oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000863 name: obsolete Carbon monoxide oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000864 name: obsolete Hydrogenotrophic methanogenesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000865 name: obsolete Acetoclastic methanogenesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000866 name: obsolete Methylotrophic methanogenesis is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000867 name: obsolete Anaerobic methane oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000868 name: obsolete Lanthanide reduction is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000869 name: obsolete Lanthanide oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1000870 name: sporulation def: "A phenotype that is relating to an organism's ability to form dormant, stress-resistant endospores." [] {IAO:0000119="GO:0043934"} synonym: "General.keywords" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "Physiology and metabolism.spore formation.spore formation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "sporulation" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "sporulation" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000871 name: spore forming def: "A sporulation in which an organism has the ability to produce endospores." [] {IAO:0000119="GO:0034301", IAO:0000119="https://purl.dsmz.de/schema/SporeFormation", IAO:0000119="OMP:0000017"} synonym: "spore" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} synonym: "yes" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "yes" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000870 ! sporulation [Term] id: METPO:1000872 name: non-spore forming def: "A sporulation in which an organism lacks the ability to produce endospores." [] {IAO:0000119="OMP:0007236", IAO:0000119="OMP:0007434", IAO:0000119="UPHENO:0083394", IAO:0000119="OMP:0000018", IAO:0000119="OMP:0007232"} synonym: "no" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "no" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "no_spore" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000870 ! sporulation [Term] id: METPO:1000881 name: cell length def: "A phenotype that inheres in a cell by virtue of its longer dimension when viewed on a plane." [] {IAO:0000119="OBA:2040145"} synonym: "cell length" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000882 name: cell width def: "A phenotype that inheres in a cell by virtue of its shorter dimension when viewed on a plane." [] {IAO:0000119="OBA:2040146"} synonym: "cell width" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1000883 name: cell length very small synonym: "L_<=1.3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000881 ! cell length property_value: METPO:range_max "1.3" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1000884 name: cell length small synonym: "L_1.3_2" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000881 ! cell length property_value: METPO:range_max "2" xsd:string property_value: METPO:range_min "1.3" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1000885 name: cell length medium synonym: "L_2_3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000881 ! cell length property_value: METPO:range_max "3" xsd:string property_value: METPO:range_min "2" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1000886 name: cell length large synonym: "L_>3" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000881 ! cell length property_value: METPO:range_min "3" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1000887 name: cell width very small synonym: "W_<=0.5" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000882 ! cell width property_value: METPO:range_max "0.5" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1000888 name: cell width small synonym: "W_0.5_0.65" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000882 ! cell width property_value: METPO:range_max "0.65" xsd:string property_value: METPO:range_min "0.5" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1000889 name: cell width medium synonym: "W_0.65_0.9" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000882 ! cell width property_value: METPO:range_max "0.9" xsd:string property_value: METPO:range_min "0.65" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1000890 name: cell width large synonym: "W_>0.9" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1000882 ! cell width property_value: METPO:range_min "0.9" xsd:string property_value: qudt:ucumCode "um" xsd:string [Term] id: METPO:1001000 name: obsolete observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001001 name: obsolete optimum temperature observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001002 name: obsolete growth temperature observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001003 name: obsolete temperature range observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001004 name: obsolete temperature delta observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001005 name: obsolete culture temperature observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001006 name: obsolete culture NaCl observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001007 name: obsolete growth NaCl observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001008 name: obsolete NaCl delta observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001009 name: obsolete NaCl range observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001010 name: obsolete optimum NaCl observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001011 name: obsolete culture pH observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001012 name: obsolete growth pH observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001013 name: obsolete optimum pH observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001014 name: obsolete pH delta observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001015 name: obsolete pH range observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001016 name: obsolete optimum oxygen observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001017 name: obsolete growth oxygen observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001018 name: obsolete oxygen range observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001019 name: obsolete oxygen delta observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001020 name: obsolete oxygen observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001021 name: obsolete temperature observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001022 name: obsolete NaCl observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001023 name: obsolete pH observation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1001101 name: biosafety level def: "A quality that categorizes biological agents according to their hazard level and required containment measures." [] synonym: "biosafety level" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "Safety information.risk assessment.biosafety level" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000188 ! quality [Term] id: METPO:1001102 name: biosafety level 1 def: "A biosafety level that pose minimal potential hazard to laboratory workers and the environment, requiring only standard microbiological practices." [] synonym: "1" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1001101 ! biosafety level property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1001103 name: biosafety level 2 def: "A biosafety level that pose moderate risk and are associated with human diseases present in the community." [] synonym: "2" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1001101 ! biosafety level [Term] id: METPO:1001104 name: biosafety level 3 def: "A biosafety level that can cause serious or potentially lethal disease through inhalation or other routes, requiring specialized containment facilities with controlled access, directional airflow, and strict safety protocols." [] synonym: "3" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "3**" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1001101 ! biosafety level property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1001105 name: biosafety level 4 def: "A biosafety level that pose extreme risk of life-threatening disease through aerosol transmission with no available treatment." [] synonym: "4" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1001101 ! biosafety level [Term] id: METPO:1001106 name: biosafety level 5 def: "A biosafety level that is proposed as a classification beyond BSL-4 for hypothetical biological agents requiring enhanced containment." [] synonym: "5" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1001101 ! biosafety level [Term] id: METPO:1002000 name: obsolete Sulfate-dependent methane oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002001 name: obsolete Fe(III)-dependent methane oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002002 name: obsolete Mn(IV)-dependent methane oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002003 name: Cable bacteria metabolism def: "A metabolism in which electrons are transferred over centimeter-scale distances through multicellular filaments." [] is_a: METPO:1000060 ! metabolism [Term] id: METPO:1002005 name: Fermentation def: "A metabolism in which energy is generated through the oxidation of organic compounds without using an external electron acceptor, using organic molecules as both electron donors and final electron acceptors." [] {IAO:0000119="GO:0006113"} synonym: "fermentation" RELATED [] {IAO:0000119="https://github.com/jmadin/bacteria_archaea_traits"} synonym: "fermentation" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1002006 name: Syntrophy def: "A metabolism in which the metabolism of one species is thermodynamically dependent on the removal of its products by another species." [] is_a: METPO:1000060 ! metabolism property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1002007 name: obsolete Sulfur disproportionation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1000806 [Term] id: METPO:1002008 name: obsolete Nitrogen fixation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1005039 [Term] id: METPO:1002009 name: obsolete Nitrate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002010 name: obsolete Anaerobic ammonium-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002011 name: obsolete Nitrous oxide-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002012 name: obsolete Sulfate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002013 name: obsolete Sulfur-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002014 name: obsolete Sulfite-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002015 name: obsolete Thiosulfate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002016 name: obsolete Sulfur-disproportionating is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002017 name: obsolete Sulfide-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002018 name: obsolete Thiosulfate-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002019 name: obsolete Sulfite-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002020 name: obsolete Iron-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002021 name: obsolete Iron-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002022 name: obsolete Nitrate-dependent Fe(II)-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002023 name: obsolete Manganese-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002024 name: obsolete Manganese-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002025 name: obsolete Uranium-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002026 name: obsolete Arsenate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002027 name: obsolete Selenate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002028 name: obsolete Selenite-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002029 name: obsolete Perchlorate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002030 name: obsolete Chlorate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002031 name: obsolete Bromate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002032 name: obsolete Iodate-reducing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002033 name: obsolete Hydrogen-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002034 name: obsolete Sulfur-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002035 name: obsolete Ammonia oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002036 name: obsolete Nitrite oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002037 name: obsolete Complete ammonia-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002038 name: obsolete Methane oxidation is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002039 name: obsolete Carbon monoxide-oxidizing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: METPO:1002040 name: obsolete Nitrogen-fixing is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true replaced_by: METPO:1005039 [Term] id: METPO:1003000 name: pH growth preference def: "A phenotype that describes how the rate and extent of population growth are affected by environmental pH." [] {IAO:0000119="OMP:0005008"} synonym: "pH growth" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1003001 name: neutrophilic def: "A pH growth preference characterized by optimal growth at near-neutral pH values, typically between pH 6.5 and 7.5." [] {IAO:0000119="PATO:0070046", IAO:0000119="OMP:0005010"} synonym: "neutralophile" EXACT [] synonym: "neutralophilic" EXACT [] synonym: "neutrophile" EXACT [] is_a: METPO:1003000 ! pH growth preference property_value: IAO:0000117 "Anthea Guo" xsd:string [Term] id: METPO:1003002 name: alkaliphilic def: "A pH growth preference in which an organism grows optimally at pH values above 9." [] {IAO:0000119="OMP:0005009", IAO:0000119="MICRO:0001549", IAO:0000119="OMP:0005010", IAO:0000119="ENVO:00002022", IAO:0000119="OMP:0005011"} synonym: "alkaliphile" EXACT [] synonym: "alkaliphilic" EXACT [] synonym: "alkalophile" EXACT [] synonym: "alkalophilic" EXACT [] is_a: METPO:1003000 ! pH growth preference [Term] id: METPO:1003003 name: acidophilic def: "A pH growth preference in which an organism grows optimally at pH values below 5." [] {IAO:0000119="OMP:0007945", IAO:0000119="OMP:0005009", IAO:0000119="MICRO:0001549", IAO:0000119="OMP:0005010", IAO:0000119="OMP:0005011"} synonym: "acidophil" EXACT [] synonym: "acidophile" EXACT [] synonym: "acidophilic" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1003000 ! pH growth preference [Term] id: METPO:1003004 name: obligately alkaliphilic def: "An alkaliphilic phenotype in which an organism requires alkaline conditions (typically pH above 8.5) for growth and cannot grow at neutral or acidic pH." [] {IAO:0000119="OMP:0007947", IAO:0000119="ENVO:00002022", IAO:0000119="MICRO:0001565", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"} synonym: "obligate alkaliphile" EXACT [] synonym: "obligate alkaphilic" EXACT [] synonym: "obligately alkaliphilic" EXACT [] is_a: METPO:1003002 ! alkaliphilic property_value: IAO:0000117 "Luke Wang" xsd:string [Term] id: METPO:1003005 name: facultatively alkaliphilic def: "A pH growth preference in which an organism can grow at alkaline pH but does not require it." [] {IAO:0000119="MICRO:0001558", IAO:0000119="OMP:0005009", IAO:0000119="OMP:0007947", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"} synonym: "facultative alkaliphile" EXACT [] synonym: "facultative alkaphilic" EXACT [] synonym: "facultatively alkaliphilic" EXACT [] is_a: METPO:1003000 ! pH growth preference [Term] id: METPO:1003006 name: obligately acidophilic def: "An acidophilic phenotype in which an organism requires acidic environments (pH below 5.5) for growth, with inability to grow at neutral or alkaline pH values." [] {IAO:0000119="MICRO:0001566"} synonym: "obligate acidophile" EXACT [] synonym: "obligately acidophilic" EXACT [] is_a: METPO:1003003 ! acidophilic property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1003007 name: facultatively acidophilic def: "A pH growth preference characterized by optimal growth in acidic environments (pH below 5.5) with the capacity to also grow at near-neutral pH values." [] {IAO:0000119="OMP:0007945", IAO:0000119="OMP:0007009", IAO:0000119="MICRO:0001557", IAO:0000119="OMP:0005009", IAO:0000119="OMP:0005010"} synonym: "facultative acidophile" EXACT [] synonym: "facultatively acidophilic" EXACT [] is_a: METPO:1003000 ! pH growth preference property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1003008 name: acidotolerant def: "A pH growth preference characterized by the ability to tolerate acidic environments (typically pH below 5.5) while maintaining optimal growth near neutral pH." [] {IAO:0000119="MICRO:0001555"} synonym: "aciduric" EXACT [] is_a: METPO:1003000 ! pH growth preference property_value: IAO:0000117 "Anthea Guo" xsd:string property_value: IAO:0000117 "Jed Dongjin Kim-Ozaeta" xsd:string [Term] id: METPO:1003009 name: alkalotolerant def: "A pH growth preference in which an organism can tolerate alkaline pH but grows optimally at neutral pH." [] {IAO:0000119="OMP:0005009", IAO:0000119="OMP:0007947", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771", IAO:0000119="OMP:0007011"} synonym: "alkalitolerant" EXACT [] is_a: METPO:1003000 ! pH growth preference [Term] id: METPO:1003021 name: pigmentation def: "A phenotype characterized by the color of pigments produced by a microorganism." [] {IAO:0000119="GO:0043473"} synonym: "cell color" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1003022 name: black pigmented synonym: "Pigment_black" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003023 name: brown pigmented synonym: "Pigment_brown" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003024 name: cream pigmented synonym: "Pigment_cream" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003025 name: green pigmented synonym: "Pigment_green" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003026 name: orange pigmented synonym: "Pigment_orange" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003027 name: pink pigmented synonym: "Pigment_pink" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003028 name: red pigmented synonym: "Pigment_red" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003029 name: white pigmented synonym: "Pigment_white" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003030 name: yellow pigmented synonym: "cell color: yellow pigment" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} synonym: "Pigment_yellow" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1003031 name: carotenoid pigmentation synonym: "Pigment_carotenoid" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"} is_a: METPO:1003021 ! pigmentation [Term] id: METPO:1004000 name: pathogenic to host def: "A phenotype in which a microbe is a pathogen of some host organism, having the ability to produce an infectious disease or disorder in that host." [] {IAO:0000119="OMP:0000197", IAO:0000119="RO:0002556", IAO:0000119="PATO:0040003"} synonym: "General.keywords" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "pathogenic" RELATED [] synonym: "pathogenicity phenotype" RELATED [] synonym: "Safety information.risk assessment" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1004002 name: animal pathogen def: "A pathogenic to host phenotype in which the host organism is an animal (Metazoa)." [] {IAO:0000119="NCBITaxon:33208", IAO:0000119="RO:0002556"} synonym: "animal pathogen" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "pathogenic to animals" RELATED [] synonym: "zoopathogen" EXACT [] is_a: METPO:1004000 ! pathogenic to host [Term] id: METPO:1004003 name: plant pathogen def: "A pathogenic to host phenotype in which the host organism is a green plant (Viridiplantae)." [] {IAO:0000119="NCBITaxon:33090", IAO:0000119="RO:0002556"} synonym: "pathogenic to plants" RELATED [] synonym: "phytopathogen" EXACT [] synonym: "plant pathogen" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:1004000 ! pathogenic to host [Term] id: METPO:1004004 name: human pathogen def: "A pathogenic to host phenotype in which the host organism is a human (Homo sapiens)." [] {IAO:0000119="IDO:0000666", IAO:0000119="IDO:0000639", IAO:0000119="RO:0002556", IAO:0000119="NCBITaxon:9606"} synonym: "human pathogen" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "human-infecting" RELATED [] synonym: "infectious human pathogen" RELATED [] is_a: METPO:1004000 ! pathogenic to host [Term] id: METPO:1004005 name: growth medium def: "A material entity that provides the nutrients and environmental conditions necessary for the cultivation of microorganisms in vitro. Growth media may be liquid (broth) or solid (agar-based) and are formulated to support the growth of specific types of organisms." [] {IAO:0000119="OBI:0000079"} comment: This class is equivalent to OBI:0000079 'culture medium'. It is included in METPO to serve as the range for growth-related object properties. is_a: METPO:1000186 ! material entity property_value: skos:broadMatch https://biolink.github.io/biolink-model/ProcessedMaterial [Term] id: METPO:1005001 name: nitrification def: "A biological process in which ammonia is oxidized to nitrite (ammonia oxidation) and nitrite is oxidized to nitrate (nitrite oxidation), in two steps." [] {IAO:0000119="GO:0019332", IAO:0000119="GO:0019329"} comment: MetaTraits maps to OMIT:0027217 (wrong ontology). Correct GO terms are GO:0019329 (ammonia oxidation) and GO:0019332 (nitrite oxidation). synonym: "nitrification" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000630 ! biological process [Term] id: METPO:1005010 name: indole test def: "An assay that tests the ability of an organism to produce indole from tryptophan." [] {IAO:0000119="MICRO:0000430"} synonym: "indole test" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1005011 name: indole test positive def: "A phenotype in which an organism tests positive in the indole test, indicating it produces indole from tryptophan." [] synonym: "indole test" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1005010 ! indole test [Term] id: METPO:1005012 name: indole test negative def: "A phenotype in which an organism tests negative in the indole test, indicating it does not produce indole from tryptophan." [] is_a: METPO:1005010 ! indole test [Term] id: METPO:1005013 name: methyl red test def: "An assay that tests the ability of an organism to produce and maintain stable acid end products from glucose fermentation." [] {IAO:0000119="SNOMED:5894006"} synonym: "methyl red test" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1005014 name: methyl red test positive def: "A phenotype in which an organism tests positive in the methyl red test, indicating mixed acid fermentation." [] synonym: "methyl red test" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1005013 ! methyl red test [Term] id: METPO:1005015 name: methyl red test negative def: "A phenotype in which an organism tests negative in the methyl red test." [] is_a: METPO:1005013 ! methyl red test [Term] id: METPO:1005016 name: Voges-Proskauer test def: "An assay that tests the ability of an organism to produce acetoin from glucose via the butanediol fermentation pathway." [] {IAO:0000119="SNOMED:66592006"} synonym: "voges-proskauer test" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1005017 name: Voges-Proskauer test positive def: "A phenotype in which an organism tests positive in the Voges-Proskauer test, indicating acetoin production." [] synonym: "voges-proskauer test" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1005016 ! Voges-Proskauer test [Term] id: METPO:1005018 name: Voges-Proskauer test negative def: "A phenotype in which an organism tests negative in the Voges-Proskauer test." [] is_a: METPO:1005016 ! Voges-Proskauer test [Term] id: METPO:1005021 name: capnophilic def: "A phenotype describing an organism that requires elevated concentrations of carbon dioxide for growth." [] {IAO:0000119="SNOMED:413748004"} synonym: "capnophilic" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000601 ! oxygen preference [Term] id: METPO:1005025 name: hemolysis def: "A phenotype describing the ability of an organism to lyse red blood cells." [] {IAO:0000119="OMP:0005117"} synonym: "presence of hemolysis" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1005026 name: hemolytic def: "A phenotype in which an organism is capable of lysing red blood cells." [] is_a: METPO:1005025 ! hemolysis [Term] id: METPO:1005027 name: non-hemolytic def: "A phenotype in which an organism does not lyse red blood cells." [] is_a: METPO:1005025 ! hemolysis [Term] id: METPO:1005031 name: peritrichous flagellation def: "A motility phenotype in which flagella are distributed over the entire cell surface." [] {IAO:0000119="OMP:0000078"} synonym: "flagellum arrangement" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement [Term] id: METPO:1005032 name: polar flagellation def: "A motility phenotype in which one or more flagella are located at one or both poles of the cell." [] synonym: "flagellum arrangement" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement [Term] id: METPO:1005033 name: amphitrichous flagellation def: "A motility phenotype in which a single flagellum is present at each pole of the cell." [] is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement [Term] id: METPO:1005034 name: lophotrichous flagellation def: "A motility phenotype in which a tuft of flagella is present at one or both poles of the cell." [] is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement [Term] id: METPO:1005035 name: monotrichous flagellation def: "A motility phenotype in which a single flagellum is present at one pole of the cell." [] is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement [Term] id: METPO:1005036 name: lateral flagellation def: "A motility phenotype in which flagella emerge from the lateral side of the cell." [] is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement [Term] id: METPO:1005037 name: subpolar flagellation def: "A motility phenotype in which flagella are located near but not at the cell pole." [] is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement [Term] id: METPO:1005038 name: denitrification def: "A biological process in which nitrate or nitrite is reduced to gaseous nitrogen compounds (NO, N2O, or N2) under anaerobic or microaerobic conditions." [] {IAO:0000119="GO:0019333"} synonym: "denitrification pathway" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000630 ! biological process [Term] id: METPO:1005039 name: nitrogen fixation def: "A biological process in which atmospheric dinitrogen is reduced to ammonia, catalyzed by nitrogenase." [] {IAO:0000119="GO:0009399"} synonym: "nitrogen fixation" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000630 ! biological process [Term] id: METPO:1005040 name: generalist def: "A phenotype describing an organism with a broad ecological niche, capable of thriving across diverse environments or utilizing varied resources." [] {IAO:0000119="inbio:000022"} synonym: "generalist" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:1000059 ! phenotype [Term] id: METPO:1007005 name: flagellar arrangement def: "A phenotype characterized by the arrangement pattern of flagella on a bacterial or archaeal cell (e.g. peritrichous, polar, amphitrichous, lophotrichous, monotrichous, lateral, subpolar)." [] {IAO:0000119="OMP:0000078"} comment: subset=metpo_proposal_2026_04; priority=HIGH; xrefs=GO:0001539 synonym: "flagellation pattern" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007006 name: polytrichous flagellation def: "A flagellar arrangement in which multiple flagella (typically a tuft) are present per cell, often combined with polar attachment." [] {IAO:0000119="MICRO:0000271"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM; observations=4 synonym: "polytrichous" EXACT [] is_a: METPO:1000704 ! flagellated is_a: METPO:1007005 ! flagellar arrangement property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007062 name: colony morphology def: "A phenotype characterized by macroscopic colony characteristics such as shape, margin, elevation, surface, colour, and size." [] {IAO:0000119="OMP:0000100"} comment: subset=metpo_proposal_2026_04; priority=LOW; xrefs=PATO:0000052 is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007063 name: colony shape def: "A colony morphology characterized by the overall macroscopic colony outline as observed on solid medium." [] {IAO:0000119="OMP:0000103"} comment: subset=metpo_proposal_2026_04; priority=LOW; xrefs=PATO:0000052 is_a: METPO:1007062 ! colony morphology property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007064 name: circular colony def: "A colony shape that has a regular round outline." [] {IAO:0000119="OMP:0000166"} comment: subset=metpo_proposal_2026_04; priority=LOW; observations=2649 synonym: "round colony" EXACT [] is_a: METPO:1007063 ! colony shape property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007065 name: irregular colony def: "A colony shape that has an irregular (non-round, non-rhizoid) outline." [] {IAO:0000119="OMP:0000167"} comment: subset=metpo_proposal_2026_04; priority=LOW; observations=148 is_a: METPO:1007063 ! colony shape property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007066 name: filamentous colony def: "A colony shape that has a thread-like or filamentous outline." [] {IAO:0000119="OMP:0000088"} comment: subset=metpo_proposal_2026_04; priority=LOW; observations=16 is_a: METPO:1007063 ! colony shape property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007067 name: punctiform colony def: "A colony shape that is very small (pinpoint), typically <1 mm in diameter." [] {IAO:0000119="OMP:0000240"} comment: subset=metpo_proposal_2026_04; priority=LOW; observations=11 is_a: METPO:1007063 ! colony shape property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007068 name: rhizoid colony def: "A colony shape that has a branching, root-like outline." [] {IAO:0000119="OMP:0000168"} comment: subset=metpo_proposal_2026_04; priority=LOW; observations=8 is_a: METPO:1007063 ! colony shape property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007069 name: fried-egg-shaped colony def: "A colony shape that has a raised opaque centre and a translucent peripheral zone, resembling a fried egg." [] {IAO:0000119="MICRO:0000349"} comment: subset=metpo_proposal_2026_04; priority=LOW; observations=6 synonym: "fried-egg colony" EXACT [] is_a: METPO:1007063 ! colony shape property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007070 name: pressure tolerance def: "A phenotype characterized by the ability to grow under elevated hydrostatic pressure." [] {IAO:0000119="OMP:0005012"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "barophile" EXACT [] synonym: "piezophile" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007071 name: barophile phenotype def: "A pressure tolerance in which an organism requires or tolerates elevated hydrostatic pressure for growth." [] {IAO:0000119="MICRO:0001359"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM is_a: METPO:1007070 ! pressure tolerance property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007072 name: radiation tolerance def: "A phenotype characterized by the ability to withstand ionizing or UV radiation." [] {IAO:0000119="wikidata:Q2353022"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "radioresistant" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007073 name: osmotic tolerance def: "A phenotype characterized by the ability to grow under high osmotic pressure (non-NaCl)." [] {IAO:0000119="OMP:0005015"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "osmophile" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007074 name: metal tolerance def: "A phenotype characterized by the ability to grow in the presence of elevated metal concentrations." [] {IAO:0000119="OMP:0007890"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "metallophile" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007076 name: capsule presence def: "A phenotype characterized by the presence of an extracellular polysaccharide capsule." [] {IAO:0000119="OMP:0000203"} comment: subset=metpo_proposal_2026_04; priority=LOW; xrefs=GO:0042603 is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007077 name: biofilm formation capability def: "A phenotype characterized by the ability to form surface-attached biofilms." [] {IAO:0000119="OMP:0000176"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM; xrefs=GO:0042710 is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007080 name: catalase test def: "A biochemical test that detects catalase enzyme activity by exposing cells to hydrogen peroxide and observing for visible bubbling. The test outcome (positive or negative) is captured by its child classes; this class itself does not assert that the organism has catalase activity." [] {IAO:0000119="OMP:0000218"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "catalase activity test" EXACT [] synonym: "catalase assay" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007081 name: oxidase test def: "A biochemical test that detects cytochrome c oxidase activity using a redox indicator. The test outcome (positive or negative) is captured by its child classes; this class itself does not assert oxidase activity." [] {IAO:0000119="OMP:0000220"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "cytochrome oxidase test" EXACT [] synonym: "oxidase activity test" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007082 name: urease test def: "A biochemical test that detects urease enzyme activity by observing urea hydrolysis (typically via a pH-indicator color change). The test outcome (positive or negative) is captured by its child classes; this class itself does not assert urease activity." [] {IAO:0000119="OMP:0000222"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "urea hydrolysis test" EXACT [] synonym: "urease activity test" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007083 name: catalase positive def: "Test-outcome phenotype where the catalase test yields a positive result (visible bubbling on H2O2). The underlying enzyme-organism relation should additionally be asserted via METPO:2000302 'shows activity of' GO:0004096 'catalase activity'." [] {IAO:0000119="OMP:0000194"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM; xrefs=GO:0004096 synonym: "catalase +" EXACT [] synonym: "catalase test positive" EXACT [] is_a: METPO:1007080 ! catalase test property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007084 name: catalase negative def: "Test-outcome phenotype where the catalase test yields a negative result (no bubbling on H2O2). The underlying enzyme-organism relation should additionally be asserted via METPO:2000303 'does not show activity of' GO:0004096 'catalase activity'." [] {IAO:0000119="OMP:0000198"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "catalase -" EXACT [] synonym: "catalase test negative" EXACT [] is_a: METPO:1007080 ! catalase test property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007085 name: oxidase positive def: "Test-outcome phenotype where the oxidase test yields a positive result. The underlying enzyme-organism relation should additionally be asserted via METPO:2000302 'shows activity of' GO:0004129 'cytochrome-c oxidase activity'." [] {IAO:0000119="OMP:0006085"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM; xrefs=GO:0004129 synonym: "oxidase +" EXACT [] synonym: "oxidase test positive" EXACT [] is_a: METPO:1007081 ! oxidase test property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007086 name: oxidase negative def: "Test-outcome phenotype where the oxidase test yields a negative result. The underlying enzyme-organism relation should additionally be asserted via METPO:2000303 'does not show activity of' GO:0004129 'cytochrome-c oxidase activity'." [] {IAO:0000119="OMP:0006084"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "oxidase -" EXACT [] synonym: "oxidase test negative" EXACT [] is_a: METPO:1007081 ! oxidase test property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007087 name: urease positive def: "Test-outcome phenotype where the urease test yields a positive result. The underlying enzyme-organism relation should additionally be asserted via METPO:2000302 'shows activity of' GO:0009039 'urease activity'." [] {IAO:0000119="OMP:0006089"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM; xrefs=GO:0009039 synonym: "urease +" EXACT [] synonym: "urease test positive" EXACT [] is_a: METPO:1007082 ! urease test property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007088 name: urease negative def: "Test-outcome phenotype where the urease test yields a negative result. The underlying enzyme-organism relation should additionally be asserted via METPO:2000303 'does not show activity of' GO:0009039 'urease activity'." [] {IAO:0000119="OMP:0006090"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "urease -" EXACT [] synonym: "urease test negative" EXACT [] is_a: METPO:1007082 ! urease test property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007089 name: coagulase activity def: "A phenotype characterized by coagulase enzyme activity (clotting of blood plasma); a diagnostic marker, e.g. for Staphylococcus aureus." [] {IAO:0000119="MICRO:0000991"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "coagulase test" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007090 name: coagulase positive def: "Test-outcome phenotype where the coagulase test yields a positive result (plasma clotting). The underlying enzyme-organism relation should additionally be asserted via METPO:2000302 'shows activity of' once a sufficiently specific enzyme term is selected (no GO/EC term currently exists at the bacteriological coagulase test granularity)." [] {IAO:0000119="wikidata:Q98095684"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "coagulase +" EXACT [] synonym: "coagulase test positive" EXACT [] is_a: METPO:1007089 ! coagulase activity property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007091 name: coagulase negative def: "Test-outcome phenotype where the coagulase test yields a negative result. The underlying enzyme-organism relation should additionally be asserted via METPO:2000303 'does not show activity of' once a sufficiently specific enzyme term is selected." [] {IAO:0000119="wikidata:Q98095684"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "coagulase -" EXACT [] synonym: "coagulase test negative" EXACT [] is_a: METPO:1007089 ! coagulase activity property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007092 name: xerophilic phenotype def: "A phenotype characterized by a microbe that thrives in low water-activity environments (typically aw < 0.85), where the limiting factor is water activity (aw) rather than solute concentration; distinct from halophily and osmotic tolerance." [] {IAO:0000119="wikidata:Q980491"} comment: subset=metpo_proposal_2026_04; priority=MEDIUM synonym: "xerophile" EXACT [] synonym: "xerotolerant" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:1007093 name: epibiont phenotype def: "A phenotype characterized by a microbe that lives on the external surface of a host organism or substrate, as distinct from endosymbionts (which live inside the host); captures host-association mode, not specific host taxonomy." [] {IAO:0000119="wikidata:Q640114"} comment: subset=metpo_proposal_2026_04; priority=LOW synonym: "ectosymbiont" EXACT [] synonym: "epibiont" EXACT [] is_a: METPO:1000059 ! phenotype property_value: IAO:0000117 "Marcin Joachimiak" xsd:string [Term] id: METPO:9999999 name: obsolete obsolete is_a: oboInOwl:ObsoleteClass ! Obsolete Class property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Term] id: oboInOwl:ObsoleteClass name: Obsolete Class [Typedef] id: METPO:2000000 name: obsolete has susceptibility profile property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000001 name: organism interacts with chemical domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity [Typedef] id: METPO:2000002 name: assimilates synonym: "assimilation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000003 name: builds acid from synonym: "builds acid from" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000004 name: builds base from synonym: "builds base from" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000005 name: builds gas from synonym: "builds gas from" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000006 name: uses as carbon source synonym: "carbon source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000007 name: degrades synonym: "degradation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000008 name: uses as electron acceptor synonym: "electron acceptor" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000009 name: uses as electron donor synonym: "electron donor" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000010 name: uses as energy source synonym: "energy source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000011 name: ferments synonym: "fermentation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000012 name: uses for growth synonym: "growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000013 name: hydrolyzes synonym: "hydrolysis" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000014 name: uses as nitrogen source synonym: "nitrogen source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000015 name: uses in other way synonym: "other" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "utilizes" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000016 name: oxidizes synonym: "oxidation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000017 name: reduces synonym: "reduction" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000018 name: requires for growth synonym: "required for growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000019 name: uses for respiration synonym: "respiration" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000020 name: uses as sulfur source synonym: "sulfur source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000021 name: does not use for aerobic catabolization synonym: "aerobic catabolization" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000022 name: does not use for aerobic growth synonym: "aerobic growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000023 name: does not use for anaerobic catabolization synonym: "anaerobic catabolization" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000024 name: does not use for anaerobic growth synonym: "anaerobic growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000025 name: does not use for anaerobic growth in the dark synonym: "anaerobic growth in the dark" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000026 name: does not use for anaerobic growth with light synonym: "anaerobic growth with light" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000027 name: does not assimilate synonym: "assimilation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000028 name: does not build acid from synonym: "builds acid from" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000029 name: does not build base from synonym: "builds base from" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000030 name: does not build gas from synonym: "builds gas from" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000031 name: does not use as carbon source synonym: "carbon source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000032 name: uses for aerobic catabolization synonym: "aerobic catabolization" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000033 name: does not degrade synonym: "degradation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000034 name: does not use as electron acceptor synonym: "electron acceptor" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000035 name: does not use as electron donor synonym: "electron donor" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000036 name: does not use as energy source synonym: "energy source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000037 name: does not ferment synonym: "fermentation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000038 name: does not use for growth synonym: "growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000039 name: does not hydrolyze synonym: "hydrolysis" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000040 name: does not use as nitrogen source synonym: "nitrogen source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000041 name: does not use in other way synonym: "other" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} synonym: "utilizes" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000042 name: does not oxidize synonym: "oxidation" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000043 name: uses for aerobic growth synonym: "aerobic growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000044 name: does not reduce synonym: "reduction" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000045 name: is not required for growth synonym: "required for growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000046 name: does not use for respiration synonym: "respiration" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000047 name: does not use as sulfur source synonym: "sulfur source" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000048 name: uses for anaerobic catabolization synonym: "anaerobic catabolization" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000049 name: uses for anaerobic growth synonym: "anaerobic growth" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000050 name: uses for anaerobic growth in the dark synonym: "anaerobic growth in the dark" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000051 name: uses for anaerobic growth with light synonym: "anaerobic growth with light" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000052 name: obsolete has temperature observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000053 name: obsolete has optimum temperature observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000054 name: obsolete has growth temperature observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000055 name: obsolete has range temperature observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000056 name: obsolete has temperature delta observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000057 name: obsolete has culture temperature observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000064 name: tolerates def: "A relation between a microbe and a chemical entity indicating that the microbe's growth is not inhibited by the chemical at the concentration tested. Positive form of the chemical-tolerance pair; the negative form is METPO:2000065 'does not tolerate'." [] domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity [Typedef] id: METPO:2000065 name: does not tolerate def: "A relation between a microbe and a chemical entity indicating that the microbe's growth is inhibited by the chemical at the concentration tested. Negative form of the chemical-tolerance pair; positive form is METPO:2000064 'tolerates'. Equivalent in meaning to 'is susceptible to' and 'is sensitive to'; the canonical label uses the 'does not X' convention so the metatraits pairing logic auto-detects it as the negative member." [] domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity [Typedef] id: METPO:2000067 name: isolated from host with quality def: "A relation between a microbe and a quality of the host from which the microbe was isolated. Examples: a microbe isolated from a juvenile host has the relation ` METPO:2000067 PATO:0001190 'juvenile'`; a microbe isolated from a female host has the relation ` METPO:2000067 PATO:0000383 'female'`. The relation is one-directional: it asserts that the host bore the named quality at isolation time, not that the microbe itself has the quality." [] domain: METPO:1000525 ! microbe range: METPO:1000188 ! quality [Typedef] id: METPO:2000068 name: isolated from environment with quality def: "A relation between a microbe and a quality of the environment from which the microbe was isolated. Examples: a microbe isolated from an acidic environment has the relation ` METPO:2000068 PATO:0001429 'acidic'`; a microbe isolated from an anaerobic environment has ` METPO:2000068 PATO:0001456 'anaerobic'`. The relation does not by itself entail that the microbe is acidophilic, anaerobic, etc. as a phenotype; it only records the environment's quality at the time of isolation. Microbe phenotype assertions belong on a separate edge (e.g. METPO:1000615 acidophilic via has_phenotype)." [] domain: METPO:1000525 ! microbe range: METPO:1000188 ! quality [Typedef] id: METPO:2000101 name: has quality domain: METPO:1000525 ! microbe range: METPO:1000188 ! quality [Typedef] id: METPO:2000102 name: has phenotype property_value: skos:closeMatch has:phenotype domain: METPO:1000525 ! microbe range: METPO:1000059 ! phenotype is_a: METPO:2000101 ! has quality [Typedef] id: METPO:2000103 name: capable of property_value: skos:closeMatch capable:of domain: METPO:1000525 ! microbe range: METPO:1000630 ! biological process [Typedef] id: METPO:2000200 name: disproportionates synonym: "dismutates" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000201 name: obsolete lyses property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000202 name: produces synonym: "produces" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000203 name: obsolete fixes property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000204 name: obsolete catabolizes property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000205 name: obsolete mineralizes property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000206 name: obsolete conjugates property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000207 name: transports is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000208 name: imports domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000207 ! transports [Typedef] id: METPO:2000209 name: exports domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000207 ! transports [Typedef] id: METPO:2000210 name: accumulates is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000211 name: sequesters domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000210 ! accumulates [Typedef] id: METPO:2000212 name: compartmentalizes domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000210 ! accumulates [Typedef] id: METPO:2000213 name: obsolete binds property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000214 name: obsolete chelates property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000215 name: obsolete precipitates property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000216 name: obsolete solubilizes property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000217 name: obsolete volatilizes property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000218 name: obsolete crystallizes property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000219 name: obsolete adsorbs property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000220 name: does not disproportionate synonym: "dismutates" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000221 name: obsolete does not lyse property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000222 name: does not produce synonym: "produces" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000223 name: obsolete does not fix property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000224 name: obsolete does not catabolize property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000225 name: obsolete does not mineralize property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000226 name: obsolete does not conjugate property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000227 name: does not transport is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000228 name: does not import domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000227 ! does not transport [Typedef] id: METPO:2000229 name: does not export domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000227 ! does not transport [Typedef] id: METPO:2000230 name: does not accumulate is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000231 name: does not sequester domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000230 ! does not accumulate [Typedef] id: METPO:2000232 name: does not compartmentalize domain: METPO:1000525 ! microbe range: METPO:1000526 ! chemical entity is_a: METPO:2000230 ! does not accumulate [Typedef] id: METPO:2000233 name: obsolete does not bind property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000234 name: obsolete does not chelate property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000235 name: obsolete does not precipitate property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000236 name: obsolete does not solubilize property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000237 name: obsolete does not volatilize property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000238 name: obsolete does not crystallize property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000239 name: obsolete has pH observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000301 name: enzyme activity analyzed synonym: "Physiology and metabolism.enzymes.[].activity" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} domain: METPO:1000525 ! microbe range: METPO:1000527 ! enzyme [Typedef] id: METPO:2000302 name: shows activity of synonym: "Physiology and metabolism.enzymes.[].activity" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} domain: METPO:1000525 ! microbe range: METPO:1000527 ! enzyme is_a: METPO:2000301 ! enzyme activity analyzed [Typedef] id: METPO:2000303 name: does not show activity of synonym: "Physiology and metabolism.enzymes.[].activity" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"} domain: METPO:1000525 ! microbe range: METPO:1000527 ! enzyme is_a: METPO:2000301 ! enzyme activity analyzed [Typedef] id: METPO:2000501 name: obsolete has optimum pH observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000502 name: obsolete has growth pH observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000503 name: obsolete has range pH observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000504 name: obsolete has pH delta observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000505 name: obsolete has culture pH observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000506 name: obsolete has NaCl observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000507 name: obsolete has optimum NaCl observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000508 name: obsolete has growth NaCl observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000509 name: obsolete has range NaCl observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000510 name: obsolete has NaCl delta observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000511 name: obsolete has observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000512 name: obsolete has oxygen observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000513 name: obsolete has optimum oxygen observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000514 name: obsolete has growth oxygen observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000515 name: obsolete has range oxygen observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000516 name: obsolete has oxygen delta observation property_value: IAO:0000231 IAO:0000226 is_obsolete: true [Typedef] id: METPO:2000517 name: grows in def: "A relation between a microbe and a growth medium indicating that the microbe has been demonstrated to grow in that medium under some set of conditions. This relation represents a generalization from experimental observations reported in the literature or databases; it does not imply that the microbe will grow in the medium under all conditions." [] domain: METPO:1000525 ! microbe range: METPO:1004005 ! growth medium [Typedef] id: METPO:2000518 name: does not grow in def: "A relation between a microbe and a growth medium indicating that the microbe has been demonstrated to fail to grow in that medium under some set of conditions. This relation represents a generalization from experimental observations reported in the literature or databases; it does not imply that the microbe cannot grow in the medium under any conditions." [] domain: METPO:1000525 ! microbe range: METPO:1004005 ! growth medium [Typedef] id: METPO:2000601 name: denitrifies synonym: "denitrification" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000602 name: does not denitrify synonym: "denitrification" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000603 name: ammonifies synonym: "ammonification" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000604 name: does not ammonify synonym: "ammonification" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000605 name: oxidizes in darkness synonym: "oxidation in darkness" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:2000001 ! organism interacts with chemical [Typedef] id: METPO:2000606 name: does not oxidize in darkness synonym: "oxidation in darkness" RELATED [] {IAO:0000119="https://metatraits.embl.de/"} is_a: METPO:2000001 ! organism interacts with chemical