:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'esme_' .. highlight: bash esme_ ===== .. conda:recipe:: esme :replaces_section_title: :noindex: Earth System Modelling Environment \(ESME\) \- A bundle for scientific computing packages for climate modelling with MPI support. :homepage: https://github.com/j34ni/bioconda-recipes :license: BSD / BSD-3-Clause :recipe: /`esme `_/`meta.yaml `_ ESME \(Earth System Modelling Environment\) is a package designed to facilitate the installation and management of various scientific computing libraries with support for multiple MPI implementations \(namely MPIch\, OpenMPI\, MVApich and ParaStationMPI\). This bundle currently includes\: \- PnetCDF\: Version 1.14.1 \- HDF5\: Version 1.14.6 \- netCDF\_C\: Version 4.9.3 \- netCDF\_Fortran\: Version 4.6.2 \- ParallelIO\: Version 2.6.6 \- ESMF\: Version 8.9.0 \- OSU\_Micro\_Benchmarks\: Version 7.5.1 \- VFD\_GDS\: Version 1.0.2 \(only for the MVAPIch version with CUDA\) .. conda:package:: esme_ |downloads_esme_| |docker_esme_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_ and update with:: mamba update esme_ To create a new environment, run:: mamba create --name myenvname esme_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_: (see `esme_/tags`_ for valid values for ````) .. |downloads_esme_| image:: https://img.shields.io/conda/dn/bioconda/esme_.svg?style=flat :target: https://anaconda.org/bioconda/esme_ :alt: (downloads) .. |docker_esme_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_/tags`: https://quay.io/repository/biocontainers/esme_?tab=tags .. raw:: html .. conda:package:: esme_esmf_ |downloads_esme_esmf_| |docker_esme_esmf_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_esmf_ and update with:: mamba update esme_esmf_ To create a new environment, run:: mamba create --name myenvname esme_esmf_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_esmf_: (see `esme_esmf_/tags`_ for valid values for ````) .. |downloads_esme_esmf_| image:: https://img.shields.io/conda/dn/bioconda/esme_esmf_.svg?style=flat :target: https://anaconda.org/bioconda/esme_esmf_ :alt: (downloads) .. |docker_esme_esmf_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_esmf_/tags`: https://quay.io/repository/biocontainers/esme_esmf_?tab=tags .. raw:: html .. conda:package:: esme_hdf5_ |downloads_esme_hdf5_| |docker_esme_hdf5_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_hdf5_ and update with:: mamba update esme_hdf5_ To create a new environment, run:: mamba create --name myenvname esme_hdf5_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_hdf5_: (see `esme_hdf5_/tags`_ for valid values for ````) .. |downloads_esme_hdf5_| image:: https://img.shields.io/conda/dn/bioconda/esme_hdf5_.svg?style=flat :target: https://anaconda.org/bioconda/esme_hdf5_ :alt: (downloads) .. |docker_esme_hdf5_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_hdf5_/tags`: https://quay.io/repository/biocontainers/esme_hdf5_?tab=tags .. raw:: html .. conda:package:: esme_netcdf-c_ |downloads_esme_netcdf-c_| |docker_esme_netcdf-c_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_netcdf-c_ and update with:: mamba update esme_netcdf-c_ To create a new environment, run:: mamba create --name myenvname esme_netcdf-c_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_netcdf-c_: (see `esme_netcdf-c_/tags`_ for valid values for ````) .. |downloads_esme_netcdf-c_| image:: https://img.shields.io/conda/dn/bioconda/esme_netcdf-c_.svg?style=flat :target: https://anaconda.org/bioconda/esme_netcdf-c_ :alt: (downloads) .. |docker_esme_netcdf-c_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_netcdf-c_/tags`: https://quay.io/repository/biocontainers/esme_netcdf-c_?tab=tags .. raw:: html .. conda:package:: esme_netcdf-fortran_ |downloads_esme_netcdf-fortran_| |docker_esme_netcdf-fortran_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_netcdf-fortran_ and update with:: mamba update esme_netcdf-fortran_ To create a new environment, run:: mamba create --name myenvname esme_netcdf-fortran_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_netcdf-fortran_: (see `esme_netcdf-fortran_/tags`_ for valid values for ````) .. |downloads_esme_netcdf-fortran_| image:: https://img.shields.io/conda/dn/bioconda/esme_netcdf-fortran_.svg?style=flat :target: https://anaconda.org/bioconda/esme_netcdf-fortran_ :alt: (downloads) .. |docker_esme_netcdf-fortran_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_netcdf-fortran_/tags`: https://quay.io/repository/biocontainers/esme_netcdf-fortran_?tab=tags .. raw:: html .. conda:package:: esme_omb_ |downloads_esme_omb_| |docker_esme_omb_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_omb_ and update with:: mamba update esme_omb_ To create a new environment, run:: mamba create --name myenvname esme_omb_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_omb_: (see `esme_omb_/tags`_ for valid values for ````) .. |downloads_esme_omb_| image:: https://img.shields.io/conda/dn/bioconda/esme_omb_.svg?style=flat :target: https://anaconda.org/bioconda/esme_omb_ :alt: (downloads) .. |docker_esme_omb_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_omb_/tags`: https://quay.io/repository/biocontainers/esme_omb_?tab=tags .. raw:: html .. conda:package:: esme_pio_ |downloads_esme_pio_| |docker_esme_pio_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_pio_ and update with:: mamba update esme_pio_ To create a new environment, run:: mamba create --name myenvname esme_pio_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_pio_: (see `esme_pio_/tags`_ for valid values for ````) .. |downloads_esme_pio_| image:: https://img.shields.io/conda/dn/bioconda/esme_pio_.svg?style=flat :target: https://anaconda.org/bioconda/esme_pio_ :alt: (downloads) .. |docker_esme_pio_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_pio_/tags`: https://quay.io/repository/biocontainers/esme_pio_?tab=tags .. raw:: html .. conda:package:: esme_pnetcdf_ |downloads_esme_pnetcdf_| |docker_esme_pnetcdf_| :versions: :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install esme_pnetcdf_ and update with:: mamba update esme_pnetcdf_ To create a new environment, run:: mamba create --name myenvname esme_pnetcdf_ with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/esme_pnetcdf_: (see `esme_pnetcdf_/tags`_ for valid values for ````) .. |downloads_esme_pnetcdf_| image:: https://img.shields.io/conda/dn/bioconda/esme_pnetcdf_.svg?style=flat :target: https://anaconda.org/bioconda/esme_pnetcdf_ :alt: (downloads) .. |docker_esme_pnetcdf_| image:: https://quay.io/repository/biocontainers/esme_/status :target: https://quay.io/repository/biocontainers/esme_ .. _`esme_pnetcdf_/tags`: https://quay.io/repository/biocontainers/esme_pnetcdf_?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/esme_/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/esme_/README.html