:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'nf-docs' .. highlight: bash nf-docs ======= .. conda:recipe:: nf-docs :replaces_section_title: :noindex: Generate API documentation for Nextflow pipelines by querying the Nextflow Language Server :homepage: https://github.com/ewels/nf-docs :documentation: https://ewels.github.io/nf-docs/ :license: Apache / Apache-2.0 :recipe: /`nf-docs `_/`meta.yaml `_ .. conda:package:: nf-docs |downloads_nf-docs| |docker_nf-docs| :versions: ``0.2.0-0`` :depends httpx: ``>=0.25`` :depends jinja2: ``>=3.0`` :depends markdown: ``>=3.0`` :depends pygments: ``>=2.0`` :depends python: ``>=3.10`` :depends pyyaml: ``>=6.0`` :depends rich: ``>=13.0`` :depends rich-click: ``>=1.7`` :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install nf-docs and update with:: mamba update nf-docs To create a new environment, run:: mamba create --name myenvname nf-docs with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/nf-docs: (see `nf-docs/tags`_ for valid values for ````) .. |downloads_nf-docs| image:: https://img.shields.io/conda/dn/bioconda/nf-docs.svg?style=flat :target: https://anaconda.org/bioconda/nf-docs :alt: (downloads) .. |docker_nf-docs| image:: https://quay.io/repository/biocontainers/nf-docs/status :target: https://quay.io/repository/biocontainers/nf-docs .. _`nf-docs/tags`: https://quay.io/repository/biocontainers/nf-docs?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/nf-docs/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/nf-docs/README.html