:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pybiolib' .. highlight: bash pybiolib ======== .. conda:recipe:: pybiolib :replaces_section_title: :noindex: BioLib Python Client. :homepage: https://github.com/biolib :documentation: https://biolib.com/docs/using-applications/python :license: MIT / MIT :recipe: /`pybiolib `_/`meta.yaml `_ :links: biotools: :biotools:`biolib` .. conda:package:: pybiolib |downloads_pybiolib| |docker_pybiolib| :versions: .. raw:: html
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:depends appdirs: ``>=1.4.3`` :depends click: ``>=8.0.0`` :depends docker-py: ``>=5.0.3`` :depends flask-cors: ``>=3.0.10`` :depends importlib-metadata: ``>=1.6.1`` :depends pycryptodome: ``>=3.9.9`` :depends pyjwt: ``>=2.3.0`` :depends python: ``>=3.6.3`` :depends pyyaml: ``>=5.3.1`` :depends requests: ``>=2.25.1,<2.30.0`` :depends rich: ``>=12.4.4`` :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install pybiolib and update with:: mamba update pybiolib To create a new environment, run:: mamba create --name myenvname pybiolib with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/pybiolib: (see `pybiolib/tags`_ for valid values for ````) .. |downloads_pybiolib| image:: https://img.shields.io/conda/dn/bioconda/pybiolib.svg?style=flat :target: https://anaconda.org/bioconda/pybiolib :alt: (downloads) .. |docker_pybiolib| image:: https://quay.io/repository/biocontainers/pybiolib/status :target: https://quay.io/repository/biocontainers/pybiolib .. _`pybiolib/tags`: https://quay.io/repository/biocontainers/pybiolib?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pybiolib/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pybiolib/README.html