identifier name description resources contributor_names contributor_orcids maintainer_names maintainer_orcids 0000001 "Resources mentioned in ""Sharing biological data: why, when, and how""" These resources were listed in [Sharing biological data: why, when, and how](https://doi.org/10.1002/1873-3468.14067), which prompted further novel curation of the Bioregistry which included the addition of GenBank, Panorama Public, EMPIAR, and SSBD. It also prompted the curation of mappings to FAIRSharing when possible. biostudies|bmrb.entry|cellimage|ega.dataset|ega.study|emdb|empiar|genbank|geo|idr|insdc.sra|massive|panorama|pdb|peptideatlas.dataset|pride|ssbd.dataset|ssbd.project Charles Tapley Hoyt 0000-0003-4423-4370 0000002 Semantic Web Context Resources used in the semantic web, drawing from lists in [BioContext](https://github.com/prefixcommons/biocontext/blob/master/registry/semweb_context.yaml) and [LinkML](https://github.com/linkml/prefixmaps/blob/main/src/prefixmaps/data/linked_data.curated.yaml) as well as W3C recommendations. ac|bibo|dc|dcat|dcterms|dctypes|doap|faldo|foaf|idot|oa|oboinowl|oslc|owl|pav|prov|qb|qudt|rdf|rdfs|schema|sh|shex|skos|skosxl|swrl|vann|void|xsd Charles Tapley Hoyt 0000-0003-4423-4370 0000003 ChEBI Data Sources "The data sources used in xrefs in the ChEBI ontology. More information in the ""Data Sources"" section of [this document](https://docs.google.com/document/d/13_FqP_8qkDdw5RFv5qMYo7xRyfY4xUiuVtLn845A6Io/edit#heading=h.dkfn7xf53tpx)." chebi|chemidplus|come|drugbank|ecmdb|eurofir|google.patent|hmdb|kegg.compound|kegg.drug|kegg.glycan|knapsack|lincs.smallmolecule|lipidmaps|metacyc.compound|molbase.sheffield|pdb|pdb-ccd|pesticides|resid|smid|umbbd.compound|webelements|ymdb Charles Tapley Hoyt 0000-0003-4423-4370 0000004 International Classifications of Diseases This collection contains the many prefixes for the different repackaging of the International Classification of Diseases (ICD) throughout its major revisions. icd10|icd10cm|icd10pcs|icd11|icd11.code|icd9|icd9cm|icdo Charles Tapley Hoyt 0000-0003-4423-4370 0000005 Allen Institute Ontologies This collection contains various brain atlases from the Allen Institute. dhba|dmba|hba|mba|pba Charles Tapley Hoyt 0000-0003-4423-4370 0000006 SPAR Ontologies The [Semantic Publishing and Referencing (SPAR) Ontologies](http://www.sparontologies.net/ontologies) are a suite of orthogonal and complementary OWL 2 ontologies that enable all aspects of the publishing process to be described in machine-readable metadata statements, encoded using RDF. bido|biro|c4o|cito|datacite|deo|doco|fabio|frapo|mito|pso|puro|pwo|scoro Charles Tapley Hoyt 0000-0003-4423-4370 0000007 Publication Provenance Prefixes Prefixes useful in annotating documentation provenance. arxiv|doi|pmc|pubmed Charles Tapley Hoyt 0000-0003-4423-4370 0000008 ASKEM Epidemiology Prefixes Prefixes exported for the epidemiology domain knowledge graph in the ASKEM project. bfo|caro|doi|doid|dso|hp|ido|oae|oboinowl|ovae|owl|pmc|pubmed|rdfs|ro|symp|trans|vo Charles Tapley Hoyt 0000-0003-4423-4370 0000009 FHIR External Terminologies "Prefixes mentioned on the _external_ list on the FHIR [Code Systems](https://hl7.org/fhir/terminologies-systems.html) page. This list is mostly complete. Notably, some entries that have not been curated: - HGVS (see discussion at [#460](https://github.com/biopragmatics/bioregistry/issues/460)) - [NUBC](http://www.nubc.org) (National Uniform Billing Committee) - could not find information about the terminology or its entries - [ICPC](http://www.ph3c.org/) (International Classification of Primary Care) _same_ - [GTIN](https://www.gs1.org/standards/id-keys/gtin) (Global Trade Item Number) _same_ - [MDC](https://www.iso.org/standard/37890.html) (Medical Device Codes) since that appears to be part of a larger ISO standard vocabulary that needs further investigation" atcc|clinicaltrials|clinvar.variation|cosmic.gene|cpt|cvx|dbsnp|dicom|dsm5|ensembl|hc.din|hc.npn|hgnc|hl7.v2codesystem|hl7.v3codesystem|icd10|icd9|icf|ietf.language|imgt.hla|iso.3166|loinc|lrg|ncit|ndc|ndfrt|nucc.taxonomy|omim|pharmgkb.gene|pubmed|radlex|refseq|rxnorm|snomedct|so|ucum|unii Charles Tapley Hoyt 0000-0003-4423-4370 0000010 Global Biodata Coalition - Global Core Biodata Resources "The [Global Biodata Coalition](https://globalbiodata.org) released a [curated list](https://globalbiodata.org/scientific-activities/global-core-biodata-resources/) of 37 life sciences databases in December 2022 that they consider as having significant importance (see criteria [here](https://doi.org/10.5281/zenodo.5845116)). While it's not a primary goal of the Bioregistry to cover life science databases (other resources like Wikidata and [FAIRsharing](https://fairsharing.org) already do an excellent job of this), many notable databases induce one or more semantic spaces that are relevant for curation and prefix assignment in the Bioregistry. Therefore, a large number of the resources in this list correspond 1-to-1 with prefixes in the Bioregistry, a small number (e.g., Orphanet, CIViC, PharmGKB) correspond to multiple prefixes, some have a complicated relationship with many-to-1 relationships to prefixes (DNA Data Bank of Japan, European Nucleotide Archive), and some constitute databases that simply reuse other key vocabularies (e.g., STRING reuses UniProt, GWAS Catalog reuses dbSNP and EFO). Among the databases that don't induce semantic spaces or have simple relationships to prefixes are: - [Clinical Genome Resource](https://www.clinicalgenome.org/) (uses HGNC, MONDO, PharmGKB, etc.) - [DNA Data Bank of Japan](https://www.ddbj.nig.ac.jp/) (uses INSDC) - [GENCODE](https://www.gencodegenes.org/) (uses GenBank) - [GWAS Catalog](https://www.ebi.ac.uk/gwas/) (uses dbSNP, EFO, etc) - [STRING](https://string-db.org/) (uses UniProt)" agrkb|bacdive|brenda|brenda.ligand|brenda.ligandgroup|bto|chebi|chembl|civic.aid|civic.did|civic.eid|civic.gid|civic.sid|civic.tid|civic.vid|ecocyc|ena.embl|ensembl|eupath|flybase|gbif|gnomad|go|hgnc|interpro|mgi|orpha|orphanet.ordo|panther.family|panther.node|panther.pathway|panther.pthcmp|pdb|pharmgkb.disease|pharmgkb.drug|pharmgkb.gene|pharmgkb.pathways|pmc|pombase|px|reactome|rgd|rhea|sgd|ucsc|uniprot|wormbase|zfin Charles Tapley Hoyt 0000-0003-4423-4370 0000011 NFDI4Cat Collection "A collection of ontologies, controlled vocabularies, and schemas relevant for the NDFI4Cat Consortium. This collection was originally based on the metadata landscape of the ontologies in this list can be found [here](https://github.com/nfdi4cat/Ontology-Overview-of-NFDI4Cat). OntoCompChem and OntoKin appear on the NFDI4Cat list but have not yet been registered in the Bioregistry because the resources are missing/incomplete such that they do not meet minimum Bioregistry metadata standards. These might be added in the future if additional metadata can be found." afo|bao|bfo|cao|chebi|cheminf|chmo|dolce|edam|emmo|emmo.cif|envo|iso15926|m4i|mop|ms|obi|om|ontocape|osmo|rex|rxno|sbo|voc4cat|worldavatar.compchem|worldavatar.kin Hendrik Borgelt|Charles Tapley Hoyt 0000-0001-5886-7860|0000-0003-4423-4370 Hendrik Borgelt|Alexander Behr|David Linke 0000-0001-5886-7860|0000-0003-4620-8248|0000-0002-5898-1820 0000012 Clinical Trial Registries A collection of clinical trial registries appearing in the World Health Organization's [International Clinical Trials Registry Platform (ICTRP)](https://trialsearch.who.int/) anzctr|chictr|clinicaltrials|ctis|ctri|drks|euclinicaltrials|hc.trial|irct|isrctn|itmctr|jrct|kcris|lbctr|pactr|phrr|rebec|repec|rpcec|slctr|snctp|tctr|uminctr Charles Tapley Hoyt 0000-0003-4423-4370 0000013 Software Package Repositories These resources represent software repositories cran|crates|npm|packagist|pypi|rubygems Charles Tapley Hoyt 0000-0003-4423-4370 0000014 NFDI4Chem Collection "A collection of ontologies relevant within the [NFDI4Chem project](https://www.nfdi4chem.de/) that is mostly based on the overview paper [Ontologies4Chem: the landscape of ontologies in chemistry](https://doi.org/10.1515/pac-2021-2007). NFDI4Chem deploys a [custom instance](https://terminology.nfdi4chem.de/ts/) of the Ontology Lookup Service (OLS), called NFDI4Chem Terminology Services (TS), that provides the ontologies in this list. This list contains ontologies that cover various domains of chemistry (e.g. ChEBI, CHMO, and RXNO), those that are dependencies of these chemistry specific ontologies (e.g. BFO, RO, IAO, and OBI) as well as those ontologies, which where indexed in the NFDI4Chem TS for interoperability research purposes (e.g. PROV-O, SOSA, and OBOE)." afo|bfo|bto|chebi|cheminf|chemrof|chiro|chmo|dcat|duo|edam|efo|enm|envo|fair|fix|gainesville.core|iao|mod|mop|ms|ncit|nmr|obi|oboe|oboe.standard|om|ontorxn|pato|proco|prov|reproduceme|rex|ro|rxno|sepio|sio|sosa|ssn|ssn.system|swo|time|uo|vibso|voc4cat|worldavatar.compchem|worldavatar.kin|worldavatar.os Philip Strömert|Charles Tapley Hoyt 0000-0002-1595-3213|0000-0003-4423-4370 Philip Strömert 0000-0002-1595-3213 0000015 Biocuration Conference 2025 Collection A collection of resources added during Biocuration 2025 in Kansas City, MO, USA. antifam|biomarkerkb.biomarker|biomarkerkb.canonical|blastrule|emi|endlessforms.collection|endlessforms.element|endlessforms.graphic|endlessforms.image|endlessforms.library|endlessforms.unit|gdo Charles Tapley Hoyt 0000-0003-4423-4370 0000016 Synapse.org external links A curated list by Sage Bionetworks of external resources that are automatically linked on Synapse.org and affiliated data portals ado|agrkb|anzctr|arrayexpress|arxiv|atc|atcc|bacdive|bfo|bgee.gene|biocyc|biogrid|bioportal|bioproject|biorxiv|biosample|biostudies|bmrb.entry|brenda|brenda.ligand|brenda.ligandgroup|bto|cath|cbioportal|cdd|cellimage|cellxgene.collection|chebi|chembl|chembl.compound|chemspider|civic.aid|civic.did|civic.eid|civic.gid|civic.sid|civic.tid|civic.vid|clinicaltrials|clinvar.record|clinvar.variation|complexportal|cosmic.cell|cosmic.gene|cpt|ctd.chemical|ctri|cvx|dbgap|dbsnp|decipher|depmap|dhba|disprot|dmba|doi|doid|drks|drugbank|drugcentral|duo|ec|ecacc|edam|ega.dataset|ega.study|emdb|empiar|ena.embl|ensembl|ensembl.metazoa|ensembl.plant|euclinicaltrials|eupath|exac.variant|fairsharing|flybase|fma|funderregistry|gard|gbif|gdc|genecards.gene|geo|go|gramene.gene|gramene.growthstage|gramene.protein|gtdb|hba|hc.trial|hgnc|hl7.v2codesystem|hmdb|icd10|icd9|icdc|icf|idr|imgt.hla|inchi|inchikey|insdc|insdc.sra|intact|interpro|iso.3166|isrctn|itis|jaxmice|kegg|kegg.compound|kegg.disease|kegg.drug|kegg.glycan|kegg.pathway|kegg.reaction|loinc|massive|mba|mesh|metabolights|metacyc.compound|mgi|mir|mirbase|mondo|ncbigene|ncbiprotein|ncbitaxon|ncit|ndc|ndfrt|nextprot|nihreporter.project|nord|omim|omop|orcid|orpha|orphanet.ordo|osf|panther.family|panther.pathway|panther.pthcmp|pba|pdb|pdb-ccd|pdb.ligand|pdc.study|peco|peptideatlas.dataset|pfam|pfam.clan|pharmgkb.disease|pharmgkb.drug|pharmgkb.gene|pharmgkb.pathways|pmc|pombase|pride.project|pubchem.compound|pubmed|px|radlex|reactome|rebec|refseq|rfam|rfc|rgd|rhea|rnacentral|ror|rrid|rrrc|rxnorm|scop|sgd|signor|snomedct|so|ssbd.dataset|ssbd.project|stitch|string|tao|tcdb|uberon|unii|uniparc|uniprot|uniprot.isoform|uniprot.proteome|uniref|wikidata|wikigenes|wikipathways|wormbase|xenbase|zenodo.record|zfin|zinc Robert Allaway 0000-0003-3573-3565 0000017 DALIA Resources Prefixes relevant for the [Data Literacy Alliance (DALIA)](https://dalia.education/en) project ans.educationlevel|bibframe|bibo|bmbf.glossary|ceds.element|citedcat|codata.rdmt|dai.thesauri|datacite|dbpedia.resource|dcterms|emmo|fabio|iana.mediatype|isced1997|isced2011|loc.fdd|m4i|marc21|modalia|nfdi4dso|owl|prov|sage.socialsciencethesaurus|schema|sio|spdx|spdx.term|t4fs|unesco.thesaurus|wdrs|wikidata Charles Tapley Hoyt 0000-0003-4423-4370 0000018 Resources for modeling Open Educational Resources "The prefixes appearing in this collection correspond resources whose entities could appear as values for target groups, media types, educational levels, and other fields in OER data models. It can also include parts that are used to construct schemas for OERs It was originally curated as part of the publication [_Teaching RDM in a smart advanced inorganic lab course and its provision in the DALIA platform_ (arxiv:2509.18902)](https://arxiv.org/pdf/2509.18902)." adcad|ans.educationlevel|ccso|ceds.learning_resource_type|edam|gsso|iana.mediatype|isced1997|isced2011|isced2013|kim.amb|kim.conditionsofaccess|kim.educationlevel|kim.esv|kim.hcrt|kim.hochschulfaechersystematik|kim.lp|kim.schularten|kim.schulfaecher|loc.fdd|lrmi|lrmi.alignmenttype|lrmi.educationalaudiencerole|lrmi.eduse|lrmi.interact|lrmi.resourcetype|modalia|oeh.educationlevel|oerschema|openeduhub.context|schema|t4fs|unesco.thesaurus|vivo Charles Tapley Hoyt|Martin Voigt 0000-0003-4423-4370|0000-0001-5556-838X 0000019 Digital Humanities Prefixes relevant for the digital humanities cidoc.crm|edm|getty.att|getty.cona|getty.gvp|getty.ia|getty.tgn|getty.ulan|iconclass Charles Tapley Hoyt 0000-0003-4423-4370 0000020 KonsortSWD [KonsortSWD (Strengthen, Widen, Deepen)](https://www.nfdi.de/consortia-konsortswd) is the German National Data Infrastructure (NFDI) consortium for social, educational, behavioral, and economic sciences. This collection reflects the prefixes collected by NFDI Section Metadata for ontologies and controlled vocabularies used by members of the consortium. cessda|cessda.cdcpublishernames|cessda.cessdadatacataloguecollections|cessda.cessdapersistentidentifiertypes|cessda.countrynamesandcodes|cessda.topicclassification|ddi.aggregationmethod|ddi.analysisunit|ddi.characterset|ddi.commonalitytype|ddi.contributorrole|ddi.datasourcetype|ddi.datatype|ddi.datetype|ddi.generaldataformat|ddi.languageproficiency|ddi.lifecycleeventtype|ddi.modeofcollection|ddi.numerictype|ddi.responseunit|ddi.samplingprocedure|ddi.softwarepackage|ddi.summarystatistictype|ddi.timemethod|ddi.timezone|ddi.typeofaddress|ddi.typeofconceptgroup|ddi.typeoffrequency|ddi.typeofinstrument|ddi.typeofnote|ddi.typeoftelephone|ddi.typeoftranslationmethod|esco.isco|gesis.kategorienschemawahlstudien|gesis.rexconcepts|gesis.rexdatatype|gesis.rexgroups|gesis.thesoz|gesis.variables-relations|isced1997|isced2011|isced2013 Charles Tapley Hoyt 0000-0003-4423-4370 Noemi Betancort Cabrera 0000-0002-0156-3556 0000021 NFDI4Energy Collection Prefixes for ontologies relevant for the NFDI4Energy bonsai|brick|cim|digitalconstruction.energy|docbias|dogont|energymarketroles|meno|oeo|openadr|saref.ener|saref.grid|sargon|tib.re|udsaes.fmi|udsaes.sms|zbw.stw Charles Tapley Hoyt 0000-0003-4423-4370 Amanda Wein 0009-0009-2960-3474 0000022 NFDI4Ing Collection A collection of ontologies, controlled vocabularies, and schemas relevant for engineering and the [NFDI4Ing Consortium](https://nfdi4ing.de). Ontologies are chronologically imported from the corresponding [TIB Terminology Service collection](https://service.tib.eu/terminology/collections/nfdi4ing). afo|atomistic|battinfo|bfo|bonsai|bot|brick|building|cc|commoncoreontology|condo|cora|credit|dcterms|dfg.fo|digitalconstruction.energy|digitalconstruction.lifecycle|digitalconstruction.occupancy|dogont|dpvocab|duo|edam|emmo|fabio|fair|fidbaudigital.subject|fiesta.iot|findex.bau|findex.raum|ftonto|geosparql|gist|iao|idsa|iirds.core|iirds.mch|iirds.sft|infosecsos|iofcore|kdsf.ffk|kit.mtxx|kpio|listdb.onto|m4i|mathmoddb|mobivoc|modsci|mwo|oeo|okn.sd|om|panet|physh|pmdco|polymat|pror|prov|rosetta|saref|saref.auto|saref.building|saref.ehaw|saref.ener|saref.environment|saref.industry|saref.lift|saref.system|saref.water|saref.wearable|sepio|sh|si|sio|sosa|ssn|ssn.system|sweet|swo|t4fs|tib.bk|tib.bo|tib.dot|tib.dr|tib.gpo|tib.hpont|tib.ifc|tib.io|tib.ioc|tib.lis|tib.mat|tib.mdo|tib.mdv|tib.mt|tib.n0|tib.ofm|tib.sto|tib.tso|tribain|uat|uo|vssocore|woc.ontology|wot.td Dorothea Iglezakis|Giacomo Lanza|Susanne Arndt 0000-0002-8524-0569|0000-0002-2239-3955|0000-0002-1019-9151 0000023 DataPLANT Collection A collection of ontologies, controlled vocabularies, and schemas relevant for the DataPLANT Consortium seeded from corresponding the [TIB OLS collection](https://service.tib.eu/terminology/collections/dataplant). See also a [recent review](https://doi.org/10.3389/fpls.2023.1279694) on ontologies for plant research data. agro|bao|bco|bfo|bioportal.bof|bioportal.geospecies|bto|chebi|chmo|cob|dpbo|edam|efo|envo|eo|flopo|gaz|go|mmo|mod|ms|msio|ncbitaxon|ncit|obi|omp|pato|pco|peco|po|ppeo|ppo|pso|ro|stato|swo|to|uberon|uo Kathryn Dumschott|Angela Kranz|Hannah Dörpholz 0000-0002-9905-4011|0000-0002-8000-0400|0000-0002-0476-9699 0000024 FAIRmat Collection A collection of ontologies, controlled vocabularies, and schemas relevant for the FAIRmat Consortium seeded from corresponding the [TIB OLS collection](https://service.tib.eu/terminology/collections/fairmat). bfo|nexus|tfsco|voc4cat Markus Kühbach 0000-0002-7117-5196 0000025 NFDI4Culture Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Culture Consortium seeded from corresponding the [TIB OLS collection](https://service.tib.eu/terminology/collections/nfdi4culture). bfo|bot|cidoc.crm|dbo|dcat|dcterms|doap|fabio|foaf|frapo|geonames|gesah|gnd|iao|iconclass|lido|modsci|nfdi4culture.cto|obi|ohdab|okn.sd|org|premis|schema|skos|swo|vcard|viaf|vivo|wikidata Charles Tapley Hoyt|Etienne Posthumus 0000-0003-4423-4370|0000-0002-0006-7542 Tabea Tietz 0000-0002-1648-1684 0000026 DAPHNE4NFDI Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the DAPHNE4NFDI Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying DAPHNE4NFDI Consortium members appropriate for maintaining this collection. nexus|panet Heike Görzig|Rolf Krahl|Paul Millar 0000-0001-9121-8643|0000-0002-1266-3819|0000-0002-3957-1279 0000027 MaRDI Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the MaRDI Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying MaRDI Consortium members appropriate for maintaining this collection. amv|codemeta|factgrid|mathalgodb|mathmoddb|msc|physh|qudt|tib.bk|wikidata Björn Schembera 0000-0003-2860-6621 0000028 BERD@NFDI Collection A collection of ontologies, controlled vocabularies, and schemas relevant for the BERD@NFDI Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). dfg.fo|jel|zbw.stw Fidan Limani|Atif Latif 0000-0002-5835-2784|0000-0003-3085-3031 0000029 NFDI4DataScience Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4DataScience Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). bfo|bioschemas|codemeta|datacite|dcatap|nfdi.core|nfdi4dso|schema Benjamin Zapilko 0000-0001-9495-040X 0000030 NFDI4Earth Collection A collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Earth Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). bco|chebi|dcat|dcterms|envo|flopo|foaf|gaz|geonames|geosparql|legacy.ao|n4e|ncbitaxon|oboe|pato|po|prov|schema|skos|sosa|ssn|sweet|t4fs|tdwg.abcd|to|vcard|wlmo Auriol Degbelo 0000-0001-5087-8776 0000031 NFDI-MatWerk Collection A collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI-MatWerk Consortium created in cooperation with the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). bfo|chebi|mwo|nfdi.core|pmdco|prima Ebrahim Nourouzi|Heike Fliegl 0000-0002-2691-6995|0000-0002-7541-115X 0000032 PUNCH4NFDI Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the PUNCH4NFDI Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying PUNCH4NFDI Consortium members appropriate for maintaining this collection. PUNCH4NFDI is notable in that its sub-disciplines (e.g., astronomy, high energy physics, nuclear physics, etc.) have a large variety in data and metadata needs. bioregistry Harry Enke 0000-0002-2366-8316 0000033 FAIRagro Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the FAIRagro Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying FAIRagro Consortium members appropriate for maintaining this collection. bco|chebi|dcat|dcterms|envo|flopo|foaf|gaz|geonames|legacy.ao|ncbitaxon|oboe|pato|po|prov|schema|skos|sosa|ssn|sweet|tdwg.abcd|to|wlmo Gabriel Schneider 0000-0001-6573-3115 0000034 NFDI4BIOIMAGE Collection A collection of ontologies, controlled vocabularies, database, and schemas relevant for NFDI4BIOIMAGE bioregistry|chebi|cl|clo|cmpo|dicom|doid|edam|efo|fbbi|go|mesh|mondo|mp|mpath|ncbitaxon|obi|radlex|snomedct|swo|uberon|uo Charles Tapley Hoyt 0000-0003-4423-4370 Damien Goutte-Gattat 0000-0002-6095-8718 0000035 NFDIxCS Collection A collection of ontologies, controlled vocabularies, and schemas relevant for the NFDIxCS Consortium. amv|bfo|cito|cso|datacite|dblp.schema|dcterms|doap|fabio|gufo|hpc|iao|infosecsos|iotlite|mathmoddb|schema|seon|swo Fabian Huch 0000-0002-9418-1580 0000036 NFDI4Objects Collection "A collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Objects Consortium imported from the consortium's official BARTOC record [https://bartoc.org/en/node/18961](https://bartoc.org/en/node/18961). Note: this collection is a subset of the BARTOC collection until all ontologies and controlled vocabularies in the BARTOC collection are also curated in the Semantic Farm." amh.material|bibo|bioregistry|cidoc.crm|dai.thesauri|datacite.contributor|datacite.date|datacite.description|datacite.identifier|datacite.name|datacite.relation|datacite.resource|fish.aoe|fish.as|fish.bm|fish.event|fish.mc|fish.mt|geonames|geosparql|getty.att|getty.tgn|getty.ulan|gnd|hessische.systematik|iconclass|kenom.material|lado|lido.actor|lido.event|lido.identifier|lido.recordmetadatadate|lido.recordtype|lido.repositoryset|lido.resourcerepresentation|lido.termmaterialstech|lv|oeai.ctp|oeai.material|orcid|ror|skos|time|unesco.thesaurus|viaf|whg|wikidata Jakob Voß|Anja Gerber|Florian Thiery|Kristina Fischer 0000-0002-7613-4123|0000-0003-2576-1511|0000-0002-3246-3531|0009-0005-3991-1025 0000037 NFDI4Memory Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Memory Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying NFDI4Memory Consortium members appropriate for maintaining this collection. cidoc.crm|edm|factgrid|geonames|getty.att|getty.cona|getty.ia|getty.tgn|getty.ulan|gnd|gov.object|hisco|iconclass|kldb|lido|nfdi.core|nfdi4culture.cto|ohdab|ontome|tadirah|wikidata Tabea Tietz 0000-0002-1648-1684 0000038 Text+ Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the Text+ Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying Text+ Consortium members appropriate for maintaining this collection. bibframe|cessda.topicclassification|cidoc.crm|geonames|getty.att|getty.cona|getty.ia|getty.tgn|getty.ulan|gnd|iconclass|lido|ontolex|ontome|tadirah Thorsten Trippel 0000-0002-7211-7393 0000039 GHGA Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the GHGA Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying GHGA Consortium members appropriate for maintaining this collection. biolink|cob|duo|edam|efo|genepio|ghga|gsso|hancestro|linkml|ncit|sio Karoline Mauer 0000-0002-9454-7941 0000040 NFDI4Biodiversity Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Biodiversity Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying NFDI4Biodiversity Consortium members appropriate for maintaining this collection. abcd|ahol|aism|apto|atol|bco|bfo|biodivthes|bohlmann|bspo|caro|chebi|cl|cob|codata.rdmt|colao|dcat|dfg.fo|eco|edam|envo|envthes|eol|flopo|geonames|gfbio.biobank|gfbio.biol|gfbio.botany|gfbio.ets|gfbio.iho|gfbio.kingdom|gfbio.top|iadopt|inbio|iso.3166|itis|lepao|lpt|ncbitaxon|nfdi.core|oba|oboe|odm2.methodtype|odm2.specimentype|oim|om|pato|pco|po|prov|qudt|ro|schema|sosa|sumso|sweet|swo|taxonconcept|taxrank|tib.bk|to|uberon|unesco.thesaurus|vbo|vt Naouel Karam|Ralph Schäfermeier 0000-0002-6762-6417|0000-0002-4349-6726 0000041 NFDI4Health Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Health Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying NFDI4Health Consortium members appropriate for maintaining this collection. agrovoc|ahol|atc|atol|bao|chebi|clo|cmpo|datacite|dbsnp|dcterms|doid|efo|foodex2|foodon|go|hgnc|hp|iao|icd10|icd11|icdo|loinc|meddra|mesh|mgi|mirbase|ncbigene|ncbitaxon|ncit|orpha|rgd|snomedct|spdx|uberon|ucum|umls|uniprot Matthias Löbe 0000-0002-2344-0426 0000042 NFDI4Microbiota Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Microbiota Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying NFDI4Microbiota Consortium members appropriate for maintaining this collection. bioregistry Anandhi Iyappan|Noriko Cassman|Maja Magel 0000-0002-5571-4962|0000-0003-1655-0931|0009-0004-2517-0791 0000043 NFDI4Immuno Collection A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Immuno Consortium created by the [NFDI Section Metadata WG Ontology Harmonization and Mapping](https://github.com/nfdi-de/section-metadata-wg-onto/). The working group is in the process of identifying NFDI4Immuno Consortium members appropriate for maintaining this collection. clo|doid|hancestro|ncit|obi|snomedct|uberon Ulrik Stervbo|Sebastian Böhm 0000-0002-2831-8868|0009-0006-4599-6309 0000044 PID4NFDI Providers "[PID4NFDI](https://pid.services.base4nfdi.de) is a Base4NFDI service that provides documentation about a small number of well-known identifier schemes (e.g., DOI) and services for registering identifiers within them (e.g., DataCite). This collection reflects their [PID Providers](https://pid.services.base4nfdi.de/get-pid/providers/) page. This comes with the following caveats: - Crossref and DataCite are services that mint DOIs. Since DOIs are the identifier space, only `doi` appears in this collection. - ePIC is a service that mints Handle system. Since Handles are the identifier space, only `hdl` appears in this collection - PIDINST is an abstraction on top of DataCite / ePIC, which is covered by `doi` and `hdl` as described above" ark|doi|factgrid|gnd|hdl|igsn|orcid|pida|raid|ror|swh|wikidata Charles Tapley Hoyt 0000-0003-4423-4370 0000045 Earth System Sciences Collection "The Earth System Sciences (ESS) collection contains terminologies (ontologies and vocabularies) for describing Earth System Sciences (e.g., `bodc.cf`, `envo`), data and structures (e.g., `prov-o`), physical units (e.g., `time`), as well as measurements and observations (e.g., `tib.meth`). It was developed by the [BITS project](https://projects.tib.eu/bits/home) (BluePrints for the Integration of Terminology Services in Earth System Sciences), which was funded by the Deutsche Forschungsgemeinschaft ([project number 508107981](https://gepris.dfg.de/gepris/projekt/508107981), July 2023 – June 2026). The ESS collection's terminologies were firstly chosen by the three project partners [TIB – Leibniz Information Centre for Science and Technology](https://www.tib.eu/en/), the [German Climate Computing Center (DKRZ)](https://www.dkrz.de/en/dkrz-partner-for-climate-research?set_language=en), and the [Senckenberg - Leibniz Institution for Biodiversity and Earth System Research (SGN)](https://www.senckenberg.de/en/about-us/senckenberg-society-nature-research/) in close cooperation with [NFDI4Earth](https://www.nfdi4earth.de/) and the [Helmholtz Metadata Collaboration](https://helmholtz-metadaten.de/)." bco|bodc.cf|bodc.sdn|chebi|dcat|dcterms|dfg.fo|dpvocab|dsw|duo|ecso|edam|efo|envo|envthes|flopo|gemet.concept|geosparql|gfbio.ets|gndo|n4e|oboe|om|pato|po|prov|sbo|schema|sio|sosa|ssn|stato|sweet|t4fs|tdwg.abcd|tib.bk|tib.cgo|tib.meth|time|to|uat|uo|wlmo Anette Ganske|Angelina Kraft|Markus Stocker 0000-0003-1043-4964|0000-0002-6454-335X|0000-0001-5492-3212