A repository for the TSV-based, decentralized, community-curated curation of terms, properties, and relations that get turned into OBO, OWL, and OBO Graph JSON.
This term is most applicable to terms appearing in mathematical equations (e.g., rate laws) and connects the base concept to a symbol that has been used to represent it in a synonym.
This term is most applicable to terms appearing in mathematical equations (e.g., rate laws) and connects the base concept to a the latex representing the symbol that has been used to represent it in a synonym.
Connects an individual representing a physical constant to its numeric value
Connects an individual representing a physical constant to its formula
X has functional parent Y if X is a derivative (e.g., a salt) of Y. E.g., bepridil hydrochloride has functional parent bepridil
X is conjugate base of Y typically means that X is a deprotonated form of Y
X is conjugate acid of Y typically means that Y is a protonated form of X
X and Y are tautomers if they are different realizations of the resonance structure of the same molecule
X and Y are in an enantiomeric relationship if flipping all stereocenters of X results in Y
X has parent hydride Y if the substituents on X are replaced with hydrogens. E.g., SbCl3 has parent hydride SbH3
X speciesSpecific Y means that Y is a general phenomena, like a pathway, and X is the version that appears in a species. X should state which species with RO:0002162 (in taxon)
X ltr Y means reaction X of undetermined direction has a left-to-right reaction Y. Relevant for Rhea.
X rtl Y means reaction X of undetermined direction has a right-to-left reaction Y. Relevant for Rhea.
X bi Y means reaction X of undetermined direction has a bidirectional reaction Y. Relevant for Rhea.
connects a group to its chemical entity (e.g., carboyxylic acid group to acetate)
connects any entity to a document (e.g., with a pubmed, doi, pmc, or arxiv identifier)
connects any entity a side effect that it causes. For example, VO:0000112 (Tripedia) induces the side effect HP:0002013 (Vomiting)
connects a pathogen (NCBITaxon) to a host (NCBITaxon)
connects a vaccine (VO) to a gene that has been engineered. Most applicable to OMVs, Nanosponges, and nanolipoparticles (NLP).
connects a clinical trial to an intervention it investigates
connects a clinical trial to a condition it investigates
connects any entity to an article in which it's mentioned, e.g., extracted from NER
connects an article to a term it was annotated with (i.e. pubmed annotated with MeSH term)
connects a related trial registered in a different registry
Sibling relationship to vo:0001011 (immunizes against disease)
A relationship where the domain is a taxon and the range is a vaccine family. E.g., Severe acute respiratory syndrome coronavirus 2 (ncbitaxon:2697049) is the pathogen that defines vaccine class COVID-19 vaccine (VO:0004908). Sort of an inverse of VO:0003355, but more specific
connects a vaccine platform that is a vector vaccine to a pathogen that it uses as a vector
connects any entity to an article that a search over the entity label or its synonyms produces
connects a reaction (e.g., from Rhea) to a molecular function (e.g., from GO) that corresponds
connects a trial (e.g., from ClinicalTrials.gov) to a country (e.g., from GeoNames) based on where the trial took place
connects a vaccine (e.g., from VO) to a country or organization where it has an active license through standard approval
connects a vaccine (e.g., from VO) to a country or organization where it has an active license through emergency use authorization (EUA)