LOCUS ATCOR66M 513 bp mRNA PLN 02-MAR-1992 DEFINITION A.thaliana cor6.6 mRNA. ACCESSION X55053 VERSION X55053.1 GI:16229 KEYWORDS antifreeze protein homology; cold-regulated gene; cor6.6 gene; KIN1 homology. SOURCE thale cress. ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (bases 1 to 513) AUTHORS Thomashow,M.F. TITLE Direct Submission JOURNAL Submitted (01-FEB-1991) M.F. Thomashow, Dept. Crop and Soil Sciences, Dept. Microbiology, Michigan State University, East Lansing, Michigan 48824, USA REFERENCE 2 (bases 1 to 513) AUTHORS Gilmour,S.J., Artus,N.N. and Thomashow,M.F. TITLE cDNA sequence analysis and expression of two cold-regulated genes of Arabidopsis thaliana JOURNAL Plant Mol. Biol. 18 (1), 13-21 (1992) MEDLINE 92119220 COMMENT Cor6.6 homologous to KIN1. KIN1 is a cold-regulated Arabidopsis gene with suggested similarity to type I fish antifreeze proteins. FEATURES Location/Qualifiers source 1..513 /organism="Arabidopsis thaliana" /strain="Columbia" /db_xref="taxon:3702" gene 50..250 /gene="cor6.6" CDS 50..250 /gene="cor6.6" /note="cold regulated" /codon_start=1 /protein_id="CAA38894.1" /db_xref="GI:16230" /db_xref="SWISS-PROT:P31169" /translation="MSETNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAG KSISDAAVGGVNFVKDKTGLNK" BASE COUNT 194 a 82 c 104 g 133 t ORIGIN 1 aacaaaacac acatcaaaaa cgattttaca agaaaaaaat atctgaaaaa tgtcagagac 61 caacaagaat gccttccaag ccggtcaggc cgctggcaaa gctgaggaga agagcaatgt 121 tctgctggac aaggccaagg atgctgctgc tgcagctgga gcttccgcgc aacaggcggg 181 aaagagtata tcggatgcgg cagtgggagg tgttaacttc gtgaaggaca agaccggcct 241 gaacaagtag cgatccgagt caactttggg agttataatt tcccttttct aattaattgt 301 tgggattttc aaataaaatt tgggagtcat aattgattct cgtactcatc gtacttgttg 361 ttgtttttag tgttgtaatg ttttaatgtt tcttctccct ttagatgtac tacgtttgga 421 actttaagtt taatcaacaa aatctagttt aagttctaaa aaaaaaaaaa aaaaaaaaaa 481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa // LOCUS ATKIN2 880 bp DNA PLN 23-JUL-1992 DEFINITION A.thaliana kin2 gene. ACCESSION X62281 VERSION X62281.1 GI:16353 KEYWORDS kin2 gene. SOURCE thale cress. ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (bases 1 to 880) AUTHORS Borg-Franck,M.E. TITLE Direct Submission JOURNAL Submitted (27-SEP-1991) M.E. Borg-Franck, Inst of Biotechnology, University of Helsinki, Karvaamokuja 3, SF-00380 Helsinki, FINLAND REFERENCE 2 (bases 1 to 880) AUTHORS Kurkela,S. and Borg-Franck,M. TITLE Structure and expression of kin2, one of two cold- and ABA-induced genes of Arabidopsis thaliana JOURNAL Plant Mol. Biol. 19 (4), 689-692 (1992) MEDLINE 92329728 FEATURES Location/Qualifiers source 1..880 /organism="Arabidopsis thaliana" /strain="ssp. L. Heynh, Colombia" /db_xref="taxon:3702" TATA_signal 9..20 exon 44..160 /gene="kin2" /number=1 prim_transcript 44..>579 /gene="kin2" mRNA join(44..160,320..390,504..>579) /gene="kin2" gene 44..579 /gene="kin2" CDS join(104..160,320..390,504..579) /gene="kin2" /codon_start=1 /protein_id="CAA44171.1" /db_xref="GI:16354" /db_xref="SWISS-PROT:P31169" /translation="MSETNKNAFQAGQAAGKAERRRAMFCWTRPRMLLLQLELPRNRA GKSISDAAVGGVNFVKDKTGLNK" intron 161..319 /gene="kin2" /number=1 exon 320..390 /gene="kin2" /number=2 intron 391..503 /gene="kin2" /number=2 exon 504..>579 /gene="kin2" /number=3 polyA_signal 620..625 polyA_signal 641..646 polyA_site 785 polyA_site 800 BASE COUNT 263 a 155 c 160 g 302 t ORIGIN 1 atttggccta taaatataaa cccttaagcc cacatatctt ctcaatccat cacaaacaaa 61 acacacatca aaaacgattt tacaagaaaa aaatatctga aaaatgtcag agaccaacaa 121 gaatgccttc caagccggtc aggccgctgg caaagctgag gtactctttc tctcttagaa 181 cagagtactg atagattgtt caagttataa ctctttgaaa acagttgaaa cttgatcact 241 cctagaactt ccattttctt gtttaattta gtttgtcgta attatgtaat tgattttgtg 301 ttgaccatgg ttgttatata ggagaagagc aatgttctgc tggacaaggc caaggatgct 361 gctgctgcag ctggagcttc cgcgcaacag gtaaacgatc tatacacaca ttatgacatt 421 tatgtaaaga atgaaaagtc ttcttagagc atacatttac gcagatttct gatattttca 481 tatggtttga tgtaaatgtt ataggcggga aagagtatat cggatgcggc agtgggaggt 541 gttaacttcg tgaaggacaa gaccggcctg aacaagtagc gatccgagtc aactttggga 601 gttataattt cccttttcta attaattgtt gggattttca aataaaattt gggagtcata 661 attgattctc gtactcatcg tacttgttgt tgtttttagt gttgtaatgt tttaatgttt 721 cttctccctt tagatgtact acgtttggaa ctttaagttt aatcaacaaa atctagttta 781 agttctaaga actttgtttt accatcctct tttttattgc acttaatgct tatagacttt 841 tatctccatc catttctcaa ttcggctacg ttgaattata // LOCUS BNAKINI 441 bp mRNA PLN 27-APR-1993 DEFINITION Rapeseed Kin1 protein (kin1) mRNA, complete cds. ACCESSION M81224 VERSION M81224.1 GI:167145 KEYWORDS . SOURCE Brassica napus (cultivar Jet neuf) cold induced leaf cDNA to mRNA. ORGANISM Brassica napus Eukaryota; Viridiplantae; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; Rosidae; eurosids II; Brassicales; Brassicaceae; Brassica. REFERENCE 1 (bases 1 to 441) AUTHORS Orr,W., Iu,B., White,T., Robert,L.S. and Singh,J. TITLE Nucleotide sequence of a winter B. napus Kin 1 cDNA JOURNAL Plant Physiol. 98, 1532-1534 (1992) FEATURES Location/Qualifiers source 1..441 /organism="Brassica napus" /cultivar="Jet neuf" /db_xref="taxon:3708" /dev_stage="cold induced" /tissue_type="leaf" gene 34..300 /gene="kin1" CDS 34..231 /gene="kin1" /codon_start=1 /evidence=experimental /protein_id="AAA32993.1" /db_xref="GI:167146" /translation="MADNKQSFQAGQASGRAEEKGNVLMDKVKDAATAAGASAQTAGQ KITEAAGGAVNLVKEKTGMNK" polyA_signal 241..247 /gene="kin1" /note="putative" polyA_signal 294..300 /gene="kin1" /note="putative" polyA_site 441 /gene="kin1" BASE COUNT 129 a 76 c 110 g 126 t ORIGIN 1 aaaaaaacac aacaaaactc aataaataaa caaatggcag acaacaagca gagcttccaa 61 gccggtcaag cctctggtcg tgctgaggag aagggtaatg tgctgatgga caaggtcaag 121 gatgctgcta ccgcagctgg agcgtctgcg caaaccgcgg gacagaagat aacggaggcg 181 gcagggggag ccgttaatct cgtgaaggag aagaccggca tgaacaagta gccccattgg 241 aaataaaatt gggagttata gtttcccttt ttaatgttaa tcgttgtggt tttaaataaa 301 aattgggtgt tctaattgat cttcaccgta gttgttgttg ttgttgtttt tagtgtttga 361 agtaatgttt tcaaccttta ggtgtatgtc ttgatgttta tgtacttagt tcccccttaa 421 tgaacatctg atttaagctt c // LOCUS ARU237582 206 bp DNA PLN 24-MAR-1999 DEFINITION Armoracia rusticana csp14 gene (partial), exons 2-3. ACCESSION AJ237582 VERSION AJ237582.1 GI:4538892 KEYWORDS cold shock protein; csp14 gene. SOURCE horseradish. ORGANISM Armoracia rusticana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Armoracia. REFERENCE 1 (bases 1 to 206) AUTHORS Baymiev,A.K., Gimalov,F.R. and Vakhitov,V.A. JOURNAL Unpublished REFERENCE 2 (bases 1 to 206) AUTHORS Baymiev,A.K. TITLE Direct Submission JOURNAL Submitted (20-MAR-1999) Baymiev A.K., Departament of Biochemistry and Cytochemistry, Ufa Scientific Centre, pr. Oktyabrya 69, Ufa, Bashkortostan, Russia, 450054, RUSSIA FEATURES Location/Qualifiers source 1..206 /organism="Armoracia rusticana" /db_xref="taxon:3704" /country="Russia:Bashkortostan" mRNA join(<1..48,143..>206) /gene="csp14" exon 1..48 /gene="csp14" /number=2 gene 1..206 /gene="csp14" CDS join(<1..48,143..>206) /gene="csp14" /codon_start=2 /product="cold shock protein" /protein_id="CAB39890.1" /db_xref="GI:4538893" /translation="DKAKDAAAAAGASAQQAGKNISDAAAGGVNFVKEKTG" intron 49..142 /gene="csp14" /number=2 exon 143..206 /gene="csp14" /number=3 BASE COUNT 65 a 38 c 53 g 48 t 2 others ORIGIN 1 ggacaaggcc aaggatgctg ctgctgcagc tggagcttcc gcgcaacaag taaacagata 61 cacacacatg acacatatat aantacatat cacaagtagg tcgtagattt ctgatatntt 121 tgtattgtgt attacgtata taggcgggaa agaacatatc ggatgcagca gctggaggtg 181 ttaacttcgt gaaggagaag accggc // LOCUS BRRBIF72 282 bp mRNA PLN 01-MAR-1996 DEFINITION Brassica rapa (clone bif72) kin mRNA, complete cds. ACCESSION L31939 VERSION L31939.1 GI:1209261 KEYWORDS . SOURCE Brassica rapa flower cDNA to mRNA. ORGANISM Brassica rapa Eukaryota; Viridiplantae; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; Rosidae; eurosids II; Brassicales; Brassicaceae; Brassica. REFERENCE 1 (bases 1 to 282) AUTHORS Kim,J.-B., Kim,H.-U., Park,B.-S., Yun,C.-H., Cho,W.-S., Ryu,J.-C. and Chung,T.-Y. TITLE Nucleotide sequences of kin gene in chinese cabbage JOURNAL Unpublished (1994) FEATURES Location/Qualifiers source 1..282 /organism="Brassica rapa" /db_xref="taxon:3711" /dev_stage="flower" gene 24..221 /gene="kin" CDS 24..221 /gene="kin" /codon_start=1 /protein_id="AAA91051.1" /db_xref="GI:1209262" /translation="MADNKQSFQAGQAAGRAEEKGNVLLMDKVKDAATAAGALQTAGQ KITEAAGGAVNLVKEKTGMNK" BASE COUNT 88 a 56 c 80 g 58 t ORIGIN 1 aacaaaactc aataaataaa caaatggcag acaacaagca gagcttccaa gccggtcaag 61 ccgctggtcg tgctgaggag aagggtaatg tgctgctgat ggacaaggtc aaggatgctg 121 ctaccgcagc tggagctctc caaaccgcgg gacagaagat aacggaggcg gcagggggag 181 ccgttaatct cgtgaaggag aagaccggca tgaacaagta gccccattgg aaacaaaatt 241 gggagttata gtttcctttt taatattaat cgttgtggtt tt // LOCUS AF297471 497 bp DNA PLN 14-SEP-2000 DEFINITION Brassica napus BN28a (BN28a) gene, complete cds. ACCESSION AF297471 VERSION AF297471.1 GI:10121868 KEYWORDS . SOURCE rape. ORGANISM Brassica napus Eukaryota; Viridiplantae; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; Rosidae; eurosids II; Brassicales; Brassicaceae; Brassica. REFERENCE 1 (bases 1 to 497) AUTHORS Byass,L.J. and Flanagan,A.M. TITLE BN28a, a low temperature-induced gene of Brassica napus JOURNAL Unpublished REFERENCE 2 (bases 1 to 497) AUTHORS Byass,L.J. and Flanagan,A.M. TITLE Direct Submission JOURNAL Submitted (18-AUG-2000) AFNS, University of Alberta, 4-10 Agriculture/Forestry Centre, Edmonton, Alberta T6G 2P5, Canada FEATURES Location/Qualifiers source 1..497 /organism="Brassica napus" /cultivar="Cascade" /db_xref="taxon:3708" mRNA join(<1..54,241..309,423..>497) /gene="BN28a" /product="BN28a" gene <1..>497 /gene="BN28a" CDS join(1..54,241..309,423..497) /gene="BN28a" /note="low temperature-induced; similar to Brassica napus Kin1 in Accession Number M81224" /codon_start=1 /product="BN28a" /protein_id="AAG13407.1" /db_xref="GI:10121869" /translation="MADNKQSFQAGQAAGRAEEKGNVLMDKVKDAATAAGASAQTAGQ KITEAAGGAVNLVKEKTGMNK" BASE COUNT 155 a 89 c 116 g 137 t ORIGIN 1 atggcagaca acaagcagag cttccaagcc ggtcaagccg ctggtcgtgc tgaggtctct 61 ttctctcttt aactctctga tcaaatgcag ttgctgcggt taaacaatca cactttataa 121 aataaagaga agttatttat attttcttga accaagtaaa tgaatgtatt ttgaccaaaa 181 aaagaagaag taaatgaatg tattaattga tttcgtgtgg acaatggtgt gtaaatatag 241 gagaagggta atgtgctgat ggacaaggtc aaggatgctg ctaccgcagc tggagcgtct 301 gcgcaaaccg taagcgatct accccatgat atataaataa acatacgtct ctactctcta 361 ctgtacatgt tcgtagatct catatctttt tatgctgttc taacatgtat ttacgtttat 421 aggcgggaca gaagataacg gaggcggcag ggggagccgt taatctcgtg aaggagaaga 481 ccggcatgaa caagtag //