Tip dates
Guess
use everything after last _

Site model
Substitution rate - 1.0 - Estimate
Gamma Category Count - 4
Shape - 1.0 - Estimate
Proportion Invariant - 0.0 - not estimate
HKY
Kappa - 2.0 - Estimate
Frequencies - Estimated

Clock model
Strict clock
Clock.rate - 1.0

Priors (only specified if changed from default)
Tree - Birth Death Skyline Serial
  Origin - 100
  Sampling Proportion - 0.6
R0 - lognormal 0,1; dimension 3 - not estimate
becomeUninfectiousRate - Gamma 0.5, 61; dimension 1, upper 300 - not estimate
clock rate - Normal - mean="1.984E-3”, sigma="4.592E-4" - not estimate
gammaShape - Exponential - mean 0.5 - estimate
kappa default
mutationRate default
origin upper 100
sampling proportion 10 6 - not estimate - dimension 1

MCMC
Chain length 20000000
Store / Log every 20000