Core function |
|
|---|---|
Run SCEPTRE on high multiplicity-of-infection single-cell CRISPR screen data |
|
Auxiliary functions |
|
Threshold gRNA count matrix |
|
Combine perturbations |
|
Make QQ-plot |
|
Plot result |
|
Data |
|
Gene expression matrix |
|
gRNA expression matrix |
|
Covariate matrix |
|
gRNA groups table |
|
Gene-gRNA group pairs |
|