Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification. Really of interest to developers only BFO OWL specification label Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2 Person:Alan Ruttenberg Really of interest to developers only BFO CLIF specification label editor preferred label editor preferred label editor preferred term editor preferred term editor preferred term~editor preferred label The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English) PERSON:Daniel Schober GROUP:OBI:<http://purl.obolibrary.org/obo/obi> editor preferred label editor preferred label editor preferred term editor preferred term editor preferred term~editor preferred label example of usage A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold. PERSON:Daniel Schober GROUP:OBI:<http://purl.obolibrary.org/obo/obi> example of usage has curation status PERSON:Alan Ruttenberg PERSON:Bill Bug PERSON:Melanie Courtot OBI_0000281 has curation status has curation status definition definition textual definition A property representing the English language definitions of what NCI means by the concept. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software. English language definitions of what NCI means by the concept. These are limited to 1024 characters. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software. The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions. The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions. 2012-04-05: Barry Smith The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible. Can you fix to something like: A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property. Alan Ruttenberg Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. On the specifics of the proposed definition: We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. PERSON:Daniel Schober GROUP:OBI:<http://purl.obolibrary.org/obo/obi> DEFINITION definition definition textual definition A property representing the English language definitions of what NCI means by the concept. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software. NCI DEFINITION PT NCI editor note An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology. PERSON:Daniel Schober GROUP:OBI:<http://purl.obofoundry.org/obo/obi> editor note term editor Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people 20110707, MC: label update to term editor and definition modified accordingly. See https://github.com/information-artifact-ontology/IAO/issues/115. PERSON:Daniel Schober GROUP:OBI:<http://purl.obolibrary.org/obo/obi> term editor alternative term An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent) GROUP:OBI:<http://purl.obolibrary.org/obo/obi> alternative term alternative term definition source Formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007 formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007 PERSON:Daniel Schober Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w GROUP:OBI:<http://purl.obolibrary.org/obo/obi> definition source definition source definition_source curator note imported from For external terms/classes, the ontology from which the term was imported PERSON:Alan Ruttenberg PERSON:Melanie Courtot GROUP:OBI:<http://purl.obolibrary.org/obo/obi> imported from has associated axiom(fol) true A property representing a concept unique identifier within the NCI Enterprise Vocabulary Service's NCI Thesaurus. NHC0 Conceptual Entity code code code A property representing a concept unique identifier within the NCI Enterprise Vocabulary Service's NCI Thesaurus. NCI code PT NCI A property that represents a description of the sort of thing or category to which a concept belongs in the context of the UMLS semantic network. P106 Conceptual Entity Semantic Type Semantic_Type In general, applying semantic types aids in allowing users (or computer programs) to draw conclusions about concepts by virtue of the categories to which they have been assigned. We use a set of semantic types developed for the UMLS Metathesaurus. There are currently 134 semantic types in the UMLS. Semantic_Type Semantic_Type A property that represents a description of the sort of thing or category to which a concept belongs in the context of the UMLS semantic network. NCI Semantic_Type PT NCI A property representing an alternative Preferred Name for use in some NCI systems. P107 Conceptual Entity Display Name Display_Name Display Name Display_Name Display_Name A property representing an alternative Preferred Name for use in some NCI systems. NCI Display Name SY NCI Display_Name PT NCI A property representing the word or phrase that NCI uses by preference to refer to the concept. P108 Conceptual Entity Preferred Name Preferred_Name Preferred Name Preferred Term Preferred_Name Preferred_Name A property representing the word or phrase that NCI uses by preference to refer to the concept. NCI Preferred Name SY NCI Preferred Term SY NCI Preferred_Name PT NCI A property representing the concept unique identifier (CUI) assigned by the National Library of Medicine (NLM). If a concept in any NCI-maintained knowledgebase exists in the NLM Unified Medical Language System (UMLS), NCI includes the NLM CUI among the information we provide about the concept. P207 Conceptual Entity UMLS CUI UMLS_CUI UMLS_CUI UMLS_CUI A property representing the concept unique identifier (CUI) assigned by the National Library of Medicine (NLM). If a concept in any NCI-maintained knowledgebase exists in the NLM Unified Medical Language System (UMLS), NCI includes the NLM CUI among the information we provide about the concept. NCI UMLS_CUI PT NCI A property is used to indicate when a non-EVS entity has contributed to, and has a stake in, a concept. This is used where such entities, within or outside NCI, have indicated the need to be able to track their own concepts. A single concept can have multiple instances of this property if multiple entities have such a defined stake. P322 Conceptual Entity Contributing Source Contributing_Source Contributing_Source Contributing_Source A property is used to indicate when a non-EVS entity has contributed to, and has a stake in, a concept. This is used where such entities, within or outside NCI, have indicated the need to be able to track their own concepts. A single concept can have multiple instances of this property if multiple entities have such a defined stake. NCI Contributing_Source PT NCI A property representing the English language definition of a concept from a source other than NCI. P325 Conceptual Entity [source] Definition ALT_DEFINITION ALT_DEFINITION ALT_DEFINITION A property representing the English language definition of a concept from a source other than NCI. NCI ALT_DEFINITION PT NCI true A property representing a retired unique concept identifier created and stored as Concept Name by legacy EVS software. Use of these values was long discouraged, but continued as late as 2009 when creation of new values ceased and Concept Name was retired. Legacy values are intended solely to help resolve and update earlier coding. P366 Conceptual Entity Legacy Concept Name Legacy Concept Name Legacy_Concept_Name Legacy Concept Name A property representing a retired unique concept identifier created and stored as Concept Name by legacy EVS software. Use of these values was long discouraged, but continued as late as 2009 when creation of new values ceased and Concept Name was retired. Legacy values are intended solely to help resolve and update earlier coding. NCI Legacy Concept Name PT NCI Legacy_Concept_Name SY NCI A property representing notations made by NCI vocabulary curators. They are intended to provide supplemental, unstructured information to the user or additional insight about the concept. P98 Conceptual Entity DesignNote DesignNote DesignNote DesignNote A property representing notations made by NCI vocabulary curators. They are intended to provide supplemental, unstructured information to the user or additional insight about the concept. NCI DesignNote PT NCI alternative description equivalentTo has_alternative_id has_broad_synonym database_cross_reference A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software. FULL_SYN Synonym with Source Data has exact synonym has_exact_synonym A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software. NCI FULL_SYN PT NCI Synonym with Source Data SY NCI has_obo_namespace has_related_synonym An association that connects the concept defining a particular terminology subset with concepts that belong to this subset. Concept_In_Subset in subset in_subset An association that connects the concept defining a particular terminology subset with concepts that belong to this subset. NCI Concept_In_Subset PT NCI label label label label is located in Relation linking an Observation or Actuation or act of Sampling and a Result or Sample. Relation linking an Observation and a Sensor or Actuator and a Result, which contains a value representing the value associated with the observed Property. has result hasResult Relation linking an Observation or Actuation or act of Sampling and a Result or Sample. Relation between a FeatureOfInterest and the Sample used to represent it. Relation between a Dataset and the Sample used to represent it. has sample hasSample Relation between a FeatureOfInterest and the Sample used to represent it. Relation linking a Result to the Observation or Actuation or act of Sampling that created or caused it. Relation linking a Result to the Experiment that created or caused it. is result of isResultOf Relation linking a Result to the Observation or Actuation or act of Sampling that created or caused it. Relation from a Sample to the FeatureOfInterest that it is intended to be representative of. Relation from a Sample to the Dataset that it is intended to be representative of. is sample of isSampleOf Relation from a Sample to the FeatureOfInterest that it is intended to be representative of. Relation linking a process to the entities that are involved in that process. ProcessInvolved Relation linking an experiment to the location where it is conducted. conductsExperimentsIn A relationship represent properties detected by a sensor detectProperty The address of an geographical entity, for example, address of an organization hasAddress The location of, for example, where an event is happening, where an organization is located, or where an action takes place. hasLocation Relation linking a sample to its type hasSampleType A relationship identifying the type of a sensor in a device (i.e., Enose, HPLC, MSI, etc.) hasSensorType Relation linking a sample to the entity or location from which it was collected isCollectedFrom Relation linking an activity to the location where it is performed isPerformedAt Relation linking an activity to the object or material on which it is performed isPerformedOn A relationship between a feature of interest and a measurement about it A relationship between a feature of interest and a measurement about it has measurement hasMeasurement A relationship between a feature of interest and a property of that feature A relationship between a feature of interest and a property of that feature has property hasProperty A relationship specifying the devices that can control a certain property A relationship specifying the devices that can control a certain property is controlled by device isControlledByDevice A relationship specifying the devices that can measure a certain property A relationship specifying the devices that can measure a certain property is measured by device isMeasuredByDevice A relationship identifying the unit of measure used for a certain entity. A relationship identifying the unit of measure used for a certain entity. is measured in isMeasuredIn A relationship between a measurement and the feature of interest whose quality was measured A relationship between a measurement and the feature of interest whose quality was measured isMeasurementOf A relationship between a property and the feature of interest it belongs to A relationship between a property and the feature of interest it belongs to is property of isPropertyOf A relation between a device and the measurements it makes. Such measurement will link together the value of the measurement, its unit of measure and the property to which it relates. A relation between a device and the measurements it makes. Such measurement will link together the value of the measurement, its unit of measure and the property to which it relates. makes measurement makesMeasurement A relationship specifying the property that can be measured by a certain device A relationship specifying the property that can be measured by a certain device measures property measuresProperty A relationship between a property and the measurements it relates to A relationship between a property and the measurements it relates to relates to measurement relatesToMeasurement A relationship between a measurement and the property it relates to A relationship between a measurement and the property it relates to relates to property relatesToProperty Sample_code_number A data property that represents the fundamental or primary name of an entity base_name base_sum base_time A data property that specifies a numerical or categorical value that serves as a reference point or standard for a given entity or property base_value A data property that represents the additional sample identifier hasAdditionalID A data property that represent the batch number of a sample hasBatchNumber The latitude of a location. For example 37.42242 (WGS 84). hasLatitude The longitude of a location. For example -122.08585 (WGS 84). hasLongitude A data property that represents the packaging type of a sample, for example: air packaging hasPackageType A data property that represents the ID of a sample hasSampleId A data property that represents the storage temperature of a sample hasTemperature has_Email has_date has_format A relationship defining the version of a certain entity, e.g: device, etc has_version The name of the item. name sum A data property that represents the time when a sample was storaged time A data property that represents the date and time when an entity was last updated or modified. update_time A relationship defining the value of a certain property, e.g., energy or power. Note that, even if numeric values are expected to enable reasoning, measurement values could use other datatypes. A relationship defining the value of a certain property, e.g., energy or power has value has_value process Process a process of cell-division, \ a beating of the heart a process of meiosis a process of sleeping the course of a disease the flight of a bird the life of an organism your process of aging. p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003]) BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war) (iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] Process process p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003]) (iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] An alpha,omega-dicarboxylic acid resulting from the formal oxidation of each of the terminal methyl groups of butane to the corresponding carboxy group. It is an intermediate metabolite in the citric acid cycle. 0 C4H6O4 InChI=1S/C4H6O4/c5-3(6)1-2-4(7)8/h1-2H2,(H,5,6)(H,7,8) KDYFGRWQOYBRFD-UHFFFAOYSA-N 118.08800 118.02661 OC(=O)CCC(O)=O CHEBI:22943 CHEBI:26807 CHEBI:45639 CHEBI:9304 Beilstein:1754069 CAS:110-15-6 DrugBank:DB00139 Drug_Central:2487 ECMDB:ECMDB00254 Gmelin:2785 HMDB:HMDB0000254 KEGG:C00042 KNApSAcK:C00001205 LIPID_MAPS_instance:LMFA01170043 MetaCyc:SUC PDBeChem:SIN PMID:17439666 Reaxys:1754069 Wikipedia:Succinic_acid YMDB:YMDB00338 SUCCINIC ACID Succinic acid butanedioic acid succinic acid chebi_ontology 1,2-ethanedicarboxylic acid Bernsteinsaeure Butandisaeure Butanedionic acid Dihydrofumaric acid E363 Ethylenesuccinic acid HOOC-CH2-CH2-COOH acide butanedioique acide succinique acidum succinicum amber acid asuccin spirit of amber CHEBI:15741 Succinic succinic acid Beilstein:1754069 Beilstein CAS:110-15-6 ChemIDplus CAS:110-15-6 KEGG COMPOUND CAS:110-15-6 NIST Chemistry WebBook Drug_Central:2487 DrugCentral Gmelin:2785 Gmelin LIPID_MAPS_instance:LMFA01170043 LIPID MAPS PMID:17439666 Europe PMC Reaxys:1754069 Reaxys SUCCINIC ACID PDBeChem Succinic acid KEGG_COMPOUND butanedioic acid IUPAC succinic acid IUPAC 1,2-ethanedicarboxylic acid ChemIDplus Bernsteinsaeure ChEBI Butandisaeure ChemIDplus Butanedionic acid KEGG_COMPOUND Dihydrofumaric acid HMDB E363 ChEBI Ethylenesuccinic acid KEGG_COMPOUND HOOC-CH2-CH2-COOH IUPAC acide butanedioique ChEBI acide succinique ChEBI acidum succinicum ChemIDplus amber acid NIST_Chemistry_WebBook asuccin NIST_Chemistry_WebBook spirit of amber ChEBI An azane that consists of a single nitrogen atom covelently bonded to three hydrogen atoms. 0 H3N InChI=1S/H3N/h1H3 QGZKDVFQNNGYKY-UHFFFAOYSA-N 17.03056 17.02655 [H]N([H])[H] CHEBI:13405 CHEBI:13406 CHEBI:13407 CHEBI:13771 CHEBI:22533 CHEBI:44269 CHEBI:44284 CHEBI:44404 CHEBI:7434 Beilstein:3587154 CAS:7664-41-7 Drug_Central:4625 Gmelin:79 HMDB:HMDB0000051 KEGG:C00014 KEGG:D02916 KNApSAcK:C00007267 MetaCyc:AMMONIA MolBase:930 PDBeChem:NH3 PMID:110589 PMID:11139349 PMID:11540049 PMID:11746427 PMID:11783653 PMID:13753780 PMID:14663195 PMID:15092448 PMID:15094021 PMID:15554424 PMID:15969015 PMID:16008360 PMID:16050680 PMID:16348008 PMID:16349403 PMID:16614889 PMID:16664306 PMID:16842901 PMID:17025297 PMID:17439666 PMID:17569513 PMID:17737668 PMID:18670398 PMID:22002069 PMID:22081570 PMID:22088435 PMID:22100291 PMID:22130175 PMID:22150211 PMID:22240068 PMID:22290316 PMID:22342082 PMID:22385337 PMID:22443779 PMID:22560242 Reaxys:3587154 Wikipedia:Ammonia AMMONIA Ammonia ammonia azane chebi_ontology Ammoniak NH3 R-717 [NH3] ammoniac amoniaco spirit of hartshorn CHEBI:16134 Ammonia ammonia Reaxys:3587154 Reaxys AMMONIA PDBeChem Ammonia KEGG_COMPOUND ammonia IUPAC azane IUPAC Ammoniak ChemIDplus NH3 IUPAC NH3 KEGG_COMPOUND NH3 UniProt R-717 ChEBI [NH3] MolBase ammoniac ChEBI amoniaco ChEBI spirit of hartshorn ChemIDplus Beilstein:3587154 Beilstein CAS:7664-41-7 ChemIDplus CAS:7664-41-7 KEGG COMPOUND CAS:7664-41-7 NIST Chemistry WebBook Drug_Central:4625 DrugCentral Gmelin:79 Gmelin PMID:110589 Europe PMC PMID:11139349 Europe PMC PMID:11540049 Europe PMC PMID:11746427 Europe PMC PMID:11783653 Europe PMC PMID:13753780 Europe PMC PMID:14663195 Europe PMC PMID:15092448 Europe PMC PMID:15094021 Europe PMC PMID:15554424 Europe PMC PMID:15969015 Europe PMC PMID:16008360 Europe PMC PMID:16050680 Europe PMC PMID:16348008 Europe PMC PMID:16349403 Europe PMC PMID:16614889 Europe PMC PMID:16664306 Europe PMC PMID:16842901 Europe PMC PMID:17025297 Europe PMC PMID:17439666 Europe PMC PMID:17569513 Europe PMC PMID:17737668 Europe PMC PMID:18670398 Europe PMC PMID:22002069 Europe PMC PMID:22081570 Europe PMC PMID:22088435 Europe PMC PMID:22100291 Europe PMC PMID:22130175 Europe PMC PMID:22150211 Europe PMC PMID:22240068 Europe PMC PMID:22290316 Europe PMC PMID:22342082 Europe PMC PMID:22385337 Europe PMC PMID:22443779 Europe PMC PMID:22560242 Europe PMC A branched fatty acid comprising propanoic acid carrying a methyl branch at C-2. 0 C4H8O2 InChI=1S/C4H8O2/c1-3(2)4(5)6/h3H,1-2H3,(H,5,6) KQNPFQTWMSNSAP-UHFFFAOYSA-N 88.10512 88.05243 CC(C)C(O)=O CHEBI:1212 CHEBI:19710 CHEBI:25337 CHEBI:40653 CHEBI:43397 BPDB:3128 Beilstein:635770 CAS:79-31-2 DrugBank:DB02531 Gmelin:49630 HMDB:HMDB0001873 KEGG:C02632 KNApSAcK:C00029462 LIPID_MAPS_instance:LMFA01020071 MetaCyc:ISOBUTYRATE PDBeChem:ALQ PMID:10757489 PMID:17580301 PMID:17877388 PPDB:3128 Reaxys:635770 UM-BBD_compID:c0383 Wikipedia:Isobutyric_acid 2-methylpropanoic acid ISOBUTYRIC ACID Isobutyric acid chebi_ontology 2,2-dimethylacetic acid 2-METHYL-PROPIONIC ACID 2-Methylpropanoate 2-Methylpropanoic acid 2-Methylpropionsaeure Dimethylacetic acid Isobutanoate Isobuttersaeure Isobutyrate alpha-isobutyric acid alpha-methylpropanoic acid alpha-methylpropionic acid iso-C3H7COOH iso-butyric acid isobutanoic acid isopropylformic acid CHEBI:16135 Isobutyric isobutyric acid Beilstein:635770 Beilstein CAS:79-31-2 ChemIDplus CAS:79-31-2 KEGG COMPOUND CAS:79-31-2 NIST Chemistry WebBook Gmelin:49630 Gmelin LIPID_MAPS_instance:LMFA01020071 LIPID MAPS PMID:10757489 Europe PMC PMID:17580301 Europe PMC PMID:17877388 Europe PMC Reaxys:635770 Reaxys UM-BBD_compID:c0383 UM-BBD 2-methylpropanoic acid IUPAC ISOBUTYRIC ACID PDBeChem Isobutyric acid KEGG_COMPOUND 2,2-dimethylacetic acid ChEBI 2-METHYL-PROPIONIC ACID PDBeChem 2-Methylpropanoate KEGG_COMPOUND 2-Methylpropanoic acid KEGG_COMPOUND 2-Methylpropionsaeure ChEBI Dimethylacetic acid KEGG_COMPOUND Isobutanoate KEGG_COMPOUND Isobuttersaeure ChEBI Isobutyrate KEGG_COMPOUND alpha-isobutyric acid ChEBI alpha-methylpropanoic acid NIST_Chemistry_WebBook alpha-methylpropionic acid NIST_Chemistry_WebBook iso-C3H7COOH NIST_Chemistry_WebBook iso-butyric acid ChEBI isobutanoic acid NIST_Chemistry_WebBook isopropylformic acid NIST_Chemistry_WebBook A sulfur hydride consisting of a single sulfur atom bonded to two hydrogen atoms. A highly poisonous, flammable gas with a characteristic odour of rotten eggs, it is often produced by bacterial decomposition of organic matter in the absence of oxygen. 0 H2S InChI=1S/H2S/h1H2 RWSOTUBLDIXVET-UHFFFAOYSA-N 34.08188 33.98772 [H]S[H] CHEBI:13356 CHEBI:14414 CHEBI:24639 CHEBI:43058 CHEBI:45489 CHEBI:5787 Beilstein:3535004 CAS:7783-06-4 Drug_Central:4260 Gmelin:303 KEGG:C00283 KNApSAcK:C00007266 MolBase:1709 PDBeChem:H2S PMID:11788560 PMID:14654297 PMID:15003943 PMID:15607739 PMID:16446402 PMID:18098324 PMID:18524810 PMID:18948540 PMID:19695225 PMID:22004989 PMID:22378060 PMID:22448627 PMID:22473176 PMID:22486842 PMID:22520971 PMID:22787557 UM-BBD_compID:c0239 Wikipedia:Hydrogen_sulfide Hydrogen sulfide dihydridosulfur dihydrogen(sulfide) hydrogen sulfide sulfane chebi_ontology H2S HYDROSULFURIC ACID Hydrogen-sulfide Schwefelwasserstoff Sulfide [SH2] acide sulfhydrique dihydrogen monosulfide dihydrogen sulfide hydrogen monosulfide hydrogen sulphide hydrogene sulfure sulfure d'hydrogene CHEBI:16136 Hydrogen_Sulphide hydrogen sulfide Beilstein:3535004 Beilstein CAS:7783-06-4 ChemIDplus CAS:7783-06-4 KEGG COMPOUND CAS:7783-06-4 NIST Chemistry WebBook Drug_Central:4260 DrugCentral Gmelin:303 Gmelin PMID:11788560 Europe PMC PMID:14654297 Europe PMC PMID:15003943 Europe PMC PMID:15607739 Europe PMC PMID:16446402 Europe PMC PMID:18098324 Europe PMC PMID:18524810 Europe PMC PMID:18948540 Europe PMC PMID:19695225 Europe PMC PMID:22004989 Europe PMC PMID:22378060 Europe PMC PMID:22448627 Europe PMC PMID:22473176 Europe PMC PMID:22486842 Europe PMC PMID:22520971 Europe PMC PMID:22787557 Europe PMC UM-BBD_compID:c0239 UM-BBD Hydrogen sulfide KEGG_COMPOUND dihydridosulfur IUPAC dihydrogen(sulfide) IUPAC hydrogen sulfide IUPAC sulfane IUPAC H2S IUPAC H2S KEGG_COMPOUND HYDROSULFURIC ACID PDBeChem Hydrogen-sulfide KEGG_COMPOUND Schwefelwasserstoff ChemIDplus Sulfide KEGG_COMPOUND [SH2] MolBase acide sulfhydrique ChemIDplus dihydrogen monosulfide NIST_Chemistry_WebBook dihydrogen sulfide NIST_Chemistry_WebBook hydrogen monosulfide NIST_Chemistry_WebBook hydrogen sulphide ChemIDplus hydrogene sulfure ChemIDplus sulfure d'hydrogene ChEBI A one-carbon compound in which the carbon is attached by single bonds to four hydrogen atoms. It is a colourless, odourless, non-toxic but flammable gas (b.p. -161degreeC). 0 CH4 InChI=1S/CH4/h1H4 VNWKTOKETHGBQD-UHFFFAOYSA-N 16.04246 16.03130 [H]C([H])([H])[H] CHEBI:14585 CHEBI:25220 CHEBI:6811 Beilstein:1718732 CAS:74-82-8 Gmelin:59 HMDB:HMDB0002714 KEGG:C01438 MetaCyc:CH4 PMID:17791569 PMID:23104415 PMID:23353606 PMID:23376302 PMID:23397538 PMID:23718889 PMID:23739479 PMID:23742231 PMID:23756351 PMID:24132456 PMID:24161402 PMID:24259373 Patent:FR994032 Patent:US2583090 Reaxys:1718732 UM-BBD_compID:c0095 Wikipedia:Methane Methane methane tetrahydridocarbon chebi_ontology CH4 Methan marsh gas metano methyl hydride CHEBI:16183 Methane methane Beilstein:1718732 ChemIDplus CAS:74-82-8 ChemIDplus CAS:74-82-8 KEGG COMPOUND CAS:74-82-8 NIST Chemistry WebBook Gmelin:59 Gmelin PMID:17791569 Europe PMC PMID:23104415 Europe PMC PMID:23353606 Europe PMC PMID:23376302 Europe PMC PMID:23397538 Europe PMC PMID:23718889 Europe PMC PMID:23739479 Europe PMC PMID:23742231 Europe PMC PMID:23756351 Europe PMC PMID:24132456 Europe PMC PMID:24161402 Europe PMC PMID:24259373 Europe PMC Reaxys:1718732 Reaxys UM-BBD_compID:c0095 UM-BBD Methane KEGG_COMPOUND methane ChEBI methane IUPAC methane UniProt tetrahydridocarbon IUPAC CH4 IUPAC Methan ChEBI marsh gas NIST_Chemistry_WebBook metano ChEBI methyl hydride ChemIDplus A primary alcohol that is ethane in which one of the hydrogens is substituted by a hydroxy group. 0 C2H6O InChI=1S/C2H6O/c1-2-3/h3H,2H2,1H3 LFQSCWFLJHTTHZ-UHFFFAOYSA-N 46.06844 46.04186 CCO CHEBI:14222 CHEBI:23978 CHEBI:30878 CHEBI:30880 CHEBI:42377 CHEBI:44594 CHEBI:4879 Beilstein:1718733 CAS:64-17-5 DrugBank:DB00898 Drug_Central:1076 Gmelin:787 HMDB:HMDB0000108 KEGG:C00469 KEGG:D00068 KEGG:D06542 KNApSAcK:C00019560 MetaCyc:ETOH MolBase:858 MolBase:859 PDBeChem:EOH PMID:11046114 PMID:11090978 PMID:11198720 PMID:11200745 PMID:11262320 PMID:11303910 PMID:11333032 PMID:11505026 PMID:11590970 PMID:11728426 PMID:11750186 PMID:11754521 PMID:11810019 PMID:11826039 PMID:11981228 PMID:12824058 PMID:12829422 PMID:12888778 PMID:12946583 PMID:14674846 PMID:15019421 PMID:15239123 PMID:15285839 PMID:15464411 PMID:15465973 PMID:15749123 PMID:15900217 PMID:15902919 PMID:16084479 PMID:16133132 PMID:16352430 PMID:16390872 PMID:16737463 PMID:16891664 PMID:16934862 PMID:17043811 PMID:17190852 PMID:17663926 PMID:17687877 PMID:18095657 PMID:18249266 PMID:18320157 PMID:18347649 PMID:18408978 PMID:18411066 PMID:18456322 PMID:18513832 PMID:18922656 PMID:18925476 PMID:19280886 PMID:19359288 PMID:19384566 PMID:19458312 PMID:19851413 PMID:19901811 PMID:21600756 PMID:21762181 PMID:21881875 PMID:21967628 PMID:22019193 PMID:22222864 PMID:22261437 PMID:22286266 PMID:22306018 PMID:22331491 PMID:22336593 PPDB:1373 Reaxys:1718733 UM-BBD_compID:c0038 Wikipedia:Ethanol ETHANOL Ethanol ethanol chebi_ontology 1-hydroxyethane Aethanol Aethylalkohol Alkohol C2H5OH Dehydrated ethanol EtOH Ethyl alcohol Methylcarbinol [CH2Me(OH)] [OEtH] alcohol alcohol etilico alcool ethylique etanol hydroxyethane spiritus vini CHEBI:16236 Ethanol ethanol Beilstein:1718733 Beilstein CAS:64-17-5 ChemIDplus CAS:64-17-5 KEGG COMPOUND CAS:64-17-5 NIST Chemistry WebBook Drug_Central:1076 DrugCentral Gmelin:787 Gmelin PMID:11046114 Europe PMC PMID:11090978 Europe PMC PMID:11198720 Europe PMC PMID:11200745 Europe PMC PMID:11262320 Europe PMC PMID:11303910 Europe PMC PMID:11333032 Europe PMC PMID:11505026 Europe PMC PMID:11590970 Europe PMC PMID:11728426 Europe PMC PMID:11750186 Europe PMC PMID:11754521 Europe PMC PMID:11810019 Europe PMC PMID:11826039 Europe PMC PMID:11981228 Europe PMC PMID:12824058 Europe PMC PMID:12829422 Europe PMC PMID:12888778 Europe PMC PMID:12946583 Europe PMC PMID:14674846 Europe PMC PMID:15019421 Europe PMC PMID:15239123 Europe PMC PMID:15285839 Europe PMC PMID:15464411 Europe PMC PMID:15465973 Europe PMC PMID:15749123 Europe PMC PMID:15900217 Europe PMC PMID:15902919 Europe PMC PMID:16084479 Europe PMC PMID:16133132 Europe PMC PMID:16352430 Europe PMC PMID:16390872 Europe PMC PMID:16737463 Europe PMC PMID:16891664 Europe PMC PMID:16934862 Europe PMC PMID:17043811 Europe PMC PMID:17190852 Europe PMC PMID:17663926 Europe PMC PMID:17687877 Europe PMC PMID:18095657 Europe PMC PMID:18249266 Europe PMC PMID:18320157 Europe PMC PMID:18347649 Europe PMC PMID:18408978 Europe PMC PMID:18411066 Europe PMC PMID:18456322 Europe PMC PMID:18513832 Europe PMC PMID:18922656 Europe PMC PMID:18925476 Europe PMC PMID:19280886 Europe PMC PMID:19359288 Europe PMC PMID:19384566 Europe PMC PMID:19458312 Europe PMC PMID:19851413 Europe PMC PMID:19901811 Europe PMC PMID:21600756 Europe PMC PMID:21762181 Europe PMC PMID:21881875 Europe PMC PMID:21967628 Europe PMC PMID:22019193 Europe PMC PMID:22222864 Europe PMC PMID:22261437 Europe PMC PMID:22286266 Europe PMC PMID:22306018 Europe PMC PMID:22331491 Europe PMC PMID:22336593 Europe PMC Reaxys:1718733 Reaxys UM-BBD_compID:c0038 UM-BBD ETHANOL PDBeChem Ethanol KEGG_COMPOUND ethanol ChEBI ethanol IUPAC ethanol UniProt 1-hydroxyethane ChemIDplus Aethanol ChemIDplus Aethylalkohol ChemIDplus Alkohol ChemIDplus C2H5OH ChEBI Dehydrated ethanol KEGG_DRUG EtOH ChemIDplus Ethyl alcohol KEGG_COMPOUND Methylcarbinol KEGG_COMPOUND [CH2Me(OH)] MolBase [OEtH] MolBase alcohol NIST_Chemistry_WebBook alcohol etilico ChEBI alcool ethylique ChemIDplus etanol ChEBI hydroxyethane ChemIDplus spiritus vini ChEBI An aldohexose used as a source of energy and metabolic intermediate. 0 C6H12O6 180.15588 180.06339 CHEBI:14313 CHEBI:24277 CHEBI:33929 CHEBI:5418 CAS:50-99-7 KEGG:C00293 Wikipedia:Glucose Glucose gluco-hexose glucose chebi_ontology DL-glucose Glc Glukose CHEBI:17234 Glucose glucose CAS:50-99-7 KEGG COMPOUND Glucose KEGG_COMPOUND gluco-hexose IUPAC glucose IUPAC DL-glucose ChEBI Glc JCBN Glukose ChEBI A one-carbon compound in which the carbon is joined only to a single oxygen. It is a colourless, odourless, tasteless, toxic gas. 0 CO InChI=1S/CO/c1-2 UGFAIRIUMAVXCW-UHFFFAOYSA-N 28.01010 27.99491 [C-]#[O+] CHEBI:13281 CHEBI:23013 CHEBI:3282 CHEBI:41526 Beilstein:1900508 Beilstein:3535285 Beilstein:3587264 CAS:630-08-0 Gmelin:421 HMDB:HMDB0001361 KEGG:C00237 KEGG:D09706 MetaCyc:CARBON-MONOXIDE MolBase:753 PDBeChem:CMO PMID:10085152 PMID:10679539 PMID:11572959 PMID:14527438 PMID:14563665 PMID:15127883 PMID:15598489 PMID:16371440 PMID:16520836 PMID:17041734 PMID:18094356 PMID:19909254 PMID:23762709 PMID:7022476 PMID:8240252 PMID:8620577 UM-BBD_compID:c0369 Wikipedia:Carbon_monoxide CARBON MONOXIDE Carbon monoxide carbon monooxide carbon monoxide carbon(II) oxide chebi_ontology C#O CO [CO] CHEBI:17245 carbon monoxide carbon monoxide Beilstein:1900508 Beilstein Beilstein:3535285 Beilstein Beilstein:3587264 Beilstein CAS:630-08-0 ChemIDplus CAS:630-08-0 KEGG COMPOUND CAS:630-08-0 NIST Chemistry WebBook Gmelin:421 Gmelin PMID:10085152 Europe PMC PMID:10679539 Europe PMC PMID:11572959 Europe PMC PMID:14527438 Europe PMC PMID:14563665 Europe PMC PMID:15127883 Europe PMC PMID:15598489 Europe PMC PMID:16371440 Europe PMC PMID:16520836 Europe PMC PMID:17041734 Europe PMC PMID:18094356 Europe PMC PMID:19909254 Europe PMC PMID:23762709 Europe PMC PMID:7022476 Europe PMC PMID:8240252 Europe PMC PMID:8620577 Europe PMC UM-BBD_compID:c0369 UM-BBD CARBON MONOXIDE PDBeChem Carbon monoxide KEGG_COMPOUND carbon monooxide IUPAC carbon monoxide IUPAC carbon(II) oxide IUPAC C#O ChEBI CO KEGG_COMPOUND CO UniProt [CO] MolBase A mononuclear parent hydride consisting of covalently bonded hydrogen and chlorine atoms. 0 ClH HCl InChI=1S/ClH/h1H VEXZGXHMUGYJMC-UHFFFAOYSA-N 36.46064 35.97668 Cl[H] CHEBI:13364 CHEBI:24635 CHEBI:5590 CAS:7647-01-0 Drug_Central:4568 Gmelin:322 HMDB:HMDB0002306 KEGG:C01327 KEGG:D02057 MetaCyc:HCL PMID:15823700 PMID:17492841 PMID:22804993 Reaxys:1098214 Wikipedia:HCl Wikipedia:Hydrochloric_acid Hydrogen chloride chlorane chloridohydrogen hydrogen chloride chebi_ontology Chlorwasserstoff HCl Hydrochloride Hydrogenchlorid Wasserstoffchlorid [HCl] chlorure d'hydrogene cloruro de hidrogeno hydrochloric acid CHEBI:17883 hydrogen chloride hydrogen chloride CAS:7647-01-0 ChemIDplus CAS:7647-01-0 KEGG COMPOUND CAS:7647-01-0 NIST Chemistry WebBook Drug_Central:4568 DrugCentral Gmelin:322 Gmelin PMID:15823700 Europe PMC PMID:17492841 Europe PMC PMID:22804993 Europe PMC Reaxys:1098214 Reaxys Hydrogen chloride KEGG_COMPOUND chlorane IUPAC chloridohydrogen IUPAC hydrogen chloride IUPAC Chlorwasserstoff ChEBI HCl KEGG_COMPOUND Hydrochloride KEGG_COMPOUND Hydrogenchlorid ChEBI Wasserstoffchlorid ChEBI [HCl] IUPAC chlorure d'hydrogene ChEBI cloruro de hidrogeno ChEBI hydrochloric acid ChemIDplus A compound consisting of carbon and hydrogen only. hydrocarbon hydrocarbons chebi_ontology Kohlenwasserstoff Kohlenwasserstoffe hidrocarburo hidrocarburos hydrocarbure CHEBI:24632 hydrocarbon hydrocarbon hydrocarbon IUPAC hydrocarbons IUPAC Kohlenwasserstoff ChEBI Kohlenwasserstoffe ChEBI hidrocarburo IUPAC hidrocarburos IUPAC hydrocarbure IUPAC 0 F InChI=1S/F YCKRFDGAMUMZLT-UHFFFAOYSA-N 18.99840 18.99840 [F] CAS:14762-94-8 Gmelin:16281 fluorine(.) monofluorine chebi_ontology F(.) fluorine atom fluorine radical CHEBI:30239 fluorine fluorine(.) CAS:14762-94-8 NIST Chemistry WebBook Gmelin:16281 Gmelin fluorine(.) IUPAC monofluorine IUPAC F(.) IUPAC fluorine atom NIST_Chemistry_WebBook fluorine radical NIST_Chemistry_WebBook A short-chain saturated fatty acid comprising ethane attached to the carbon of a carboxy group. 0 C3H6O2 InChI=1S/C3H6O2/c1-2-3(4)5/h2H2,1H3,(H,4,5) XBDQKXXYIPTUBI-UHFFFAOYSA-N 74.07850 74.03678 CCC(O)=O CHEBI:26304 CHEBI:45227 CHEBI:8476 Beilstein:506071 CAS:79-09-4 DrugBank:DB03766 Gmelin:1821 KEGG:C00163 KEGG:D02310 LIPID_MAPS_instance:LMFA01010003 PDBeChem:PPI PMID:15868474 PMID:1628870 PMID:16763906 PPDB:1341 Propionic acid propanoic acid propionic acid chebi_ontology CH3-CH2-COOH PA PROPANOIC ACID Propanoic acid Propionsaeure acide propanoique acide propionique carboxyethane ethanecarboxylic acid ethylformic acid metacetonic acid methylacetic acid propioic acid propoic acid pseudoacetic acid CHEBI:30768 Propionic propionic acid Beilstein:506071 Beilstein CAS:79-09-4 ChemIDplus CAS:79-09-4 KEGG COMPOUND CAS:79-09-4 NIST Chemistry WebBook Gmelin:1821 Gmelin LIPID_MAPS_instance:LMFA01010003 LIPID MAPS PMID:15868474 Europe PMC PMID:1628870 Europe PMC PMID:16763906 Europe PMC Propionic acid KEGG_COMPOUND propanoic acid IUPAC propionic acid IUPAC CH3-CH2-COOH IUPAC PA ChEBI PROPANOIC ACID PDBeChem Propanoic acid KEGG_COMPOUND Propionsaeure ChEBI acide propanoique ChEBI acide propionique NIST_Chemistry_WebBook carboxyethane ChemIDplus ethanecarboxylic acid ChemIDplus ethylformic acid ChemIDplus metacetonic acid ChemIDplus methylacetic acid ChemIDplus propioic acid LIPID_MAPS propoic acid ChEBI pseudoacetic acid ChemIDplus A tricarboxylic acid that is propane-1,2,3-tricarboxylic acid bearing a hydroxy substituent at position 2. It is an important metabolite in the pathway of all aerobic organisms. 0 C6H8O7 InChI=1S/C6H8O7/c7-3(8)1-6(13,5(11)12)2-4(9)10/h13H,1-2H2,(H,7,8)(H,9,10)(H,11,12) KRKNYBCHXYNGOX-UHFFFAOYSA-N 192.123 192.02700 OC(=O)CC(O)(CC(O)=O)C(O)=O CHEBI:23322 CHEBI:3727 CHEBI:41523 BPDB:1359 Beilstein:782061 CAS:77-92-9 DrugBank:DB04272 Drug_Central:666 Gmelin:4240 HMDB:HMDB0000094 KEGG:C00158 KEGG:D00037 KNApSAcK:C00007619 MetaCyc:CIT PDBeChem:CIT PMID:11762832 PMID:11782123 PMID:11857437 PMID:14537820 PMID:15311880 PMID:15934243 PMID:16232627 PMID:17190852 PMID:17357118 PMID:17604395 PMID:18298573 PMID:18960216 PMID:19288211 PMID:22115968 PMID:22192423 PMID:22264346 PMID:22373571 PMID:22509852 Reaxys:782061 Wikipedia:Citric_Acid 2-hydroxypropane-1,2,3-tricarboxylic acid CITRIC ACID Citric acid chebi_ontology 2-Hydroxy-1,2,3-propanetricarboxylic acid 2-Hydroxytricarballylic acid 3-Carboxy-3-hydroxypentane-1,5-dioic acid Citronensaeure E330 H3cit CHEBI:30769 Citric citric acid Beilstein:782061 Beilstein CAS:77-92-9 ChemIDplus CAS:77-92-9 KEGG COMPOUND CAS:77-92-9 NIST Chemistry WebBook Drug_Central:666 DrugCentral Gmelin:4240 Gmelin PMID:11762832 Europe PMC PMID:11782123 Europe PMC PMID:11857437 Europe PMC PMID:14537820 Europe PMC PMID:15311880 Europe PMC PMID:15934243 Europe PMC PMID:16232627 Europe PMC PMID:17190852 Europe PMC PMID:17357118 Europe PMC PMID:17604395 Europe PMC PMID:18298573 Europe PMC PMID:18960216 Europe PMC PMID:19288211 Europe PMC PMID:22115968 Europe PMC PMID:22192423 Europe PMC PMID:22264346 Europe PMC PMID:22373571 Europe PMC PMID:22509852 Europe PMC Reaxys:782061 Reaxys 2-hydroxypropane-1,2,3-tricarboxylic acid IUPAC CITRIC ACID PDBeChem Citric acid KEGG_COMPOUND 2-Hydroxy-1,2,3-propanetricarboxylic acid KEGG_COMPOUND 2-Hydroxytricarballylic acid KEGG_COMPOUND 3-Carboxy-3-hydroxypentane-1,5-dioic acid HMDB Citronensaeure ChEBI E330 ChEBI H3cit IUPAC A straight-chain saturated fatty acid that is butane in which one of the terminal methyl groups has been oxidised to a carboxy group. 0 C4H8O2 InChI=1S/C4H8O2/c1-2-3-4(5)6/h2-3H2,1H3,(H,5,6) FERIUCNNQQJTOY-UHFFFAOYSA-N 88.10510 88.05243 CCCC(O)=O CHEBI:113450 CHEBI:22948 CHEBI:3234 CHEBI:41208 Beilstein:906770 CAS:107-92-6 DrugBank:DB03568 Gmelin:26242 HMDB:HMDB0000039 KEGG:C00246 KNApSAcK:C00001180 LIPID_MAPS_instance:LMFA01010004 MetaCyc:BUTYRIC_ACID PDBeChem:BUA PMID:10736622 PMID:10956204 PMID:11201044 PMID:11208715 PMID:11238216 PMID:11305323 PMID:12068484 PMID:13678314 PMID:14962641 PMID:1542095 PMID:15809727 PMID:15810631 PMID:15938880 PMID:19318247 PMID:19366864 PMID:19703412 PMID:21699495 PMID:22038864 PMID:22194341 PMID:22322557 PMID:22339023 PMID:22466881 Reaxys:906770 Wikipedia:Butyric_acid Butyric acid butanoic acid butyric acid chebi_ontology 1-butanoic acid 1-butyric acid 1-propanecarboxylic acid 4:0 BUTANOIC ACID Butanoate Butanoic acid Buttersaeure C4:0 CH3-[CH2]2-COOH acide butanoique acide butyrique butanic acid butoic acid ethylacetic acid n-butanoic acid n-butyric acid propanecarboxylic acid propylformic acid CHEBI:30772 Butyric butyric acid Beilstein:906770 Beilstein CAS:107-92-6 ChemIDplus CAS:107-92-6 KEGG COMPOUND CAS:107-92-6 NIST Chemistry WebBook Gmelin:26242 Gmelin LIPID_MAPS_instance:LMFA01010004 LIPID MAPS PMID:10736622 Europe PMC PMID:10956204 ChEMBL PMID:11201044 Europe PMC PMID:11208715 Europe PMC PMID:11238216 Europe PMC PMID:11305323 Europe PMC PMID:12068484 Europe PMC PMID:13678314 Europe PMC PMID:14962641 Europe PMC PMID:1542095 ChEMBL PMID:15809727 Europe PMC PMID:15810631 Europe PMC PMID:15938880 Europe PMC PMID:19318247 Europe PMC PMID:19366864 Europe PMC PMID:19703412 Europe PMC PMID:21699495 Europe PMC PMID:22038864 Europe PMC PMID:22194341 Europe PMC PMID:22322557 Europe PMC PMID:22339023 Europe PMC PMID:22466881 Europe PMC Reaxys:906770 Reaxys Butyric acid KEGG_COMPOUND butanoic acid IUPAC butyric acid IUPAC 1-butanoic acid HMDB 1-butyric acid HMDB 1-propanecarboxylic acid MetaCyc 4:0 ChEBI BUTANOIC ACID PDBeChem Butanoate KEGG_COMPOUND Butanoic acid KEGG_COMPOUND Buttersaeure ChEBI C4:0 ChEBI CH3-[CH2]2-COOH IUPAC acide butanoique IUPAC acide butyrique ChEBI butanic acid ChEBI butoic acid ChEBI ethylacetic acid NIST_Chemistry_WebBook n-butanoic acid NIST_Chemistry_WebBook n-butyric acid NIST_Chemistry_WebBook propanecarboxylic acid HMDB propylformic acid MetaCyc A 2-oxo monocarboxylic acid that is the 2-keto derivative of propionic acid. It is a metabolite obtained during glycolysis. 0 C3H4O3 InChI=1S/C3H4O3/c1-2(4)3(5)6/h1H3,(H,5,6) LCTONWCANYUPML-UHFFFAOYSA-N 88.06206 88.01604 CC(=O)C(O)=O CHEBI:26466 CHEBI:45253 CHEBI:8685 Beilstein:506211 CAS:127-17-3 DrugBank:DB00119 ECMDB:ECMDB00243 Gmelin:101087 HMDB:HMDB0000243 KEGG:C00022 KNApSAcK:C00001200 LIPID_MAPS_instance:LMFA01060077 MetaCyc:PYRUVATE PDBeChem:PYR PMID:11762589 PMID:19260671 PMID:22150460 PMID:22233273 PMID:22735334 PMID:22770225 Reaxys:506211 Wikipedia:Pyruvic_acid YMDB:YMDB00175 2-oxopropanoic acid PYRUVIC ACID Pyruvic acid pyruvic acid chebi_ontology 2-Oxopropanoic acid 2-Oxopropansaeure 2-Oxopropionsaeure 2-ketopropionic acid 2-oxopropanoic acid Acetylformic acid BTS Brenztraubensaeure CH3COCOOH Pyroracemic acid acetylformic acid acide pyruvique alpha-Oxopropionsaeure alpha-ketopropionic acid CHEBI:32816 Pyruvic pyruvic acid Beilstein:506211 Beilstein CAS:127-17-3 ChemIDplus CAS:127-17-3 NIST Chemistry WebBook Gmelin:101087 Gmelin LIPID_MAPS_instance:LMFA01060077 LIPID MAPS PMID:11762589 Europe PMC PMID:19260671 Europe PMC PMID:22150460 Europe PMC PMID:22233273 Europe PMC PMID:22735334 Europe PMC PMID:22770225 Europe PMC Reaxys:506211 Reaxys 2-oxopropanoic acid IUPAC PYRUVIC ACID PDBeChem Pyruvic acid KEGG_COMPOUND pyruvic acid ChEBI 2-Oxopropanoic acid KEGG_COMPOUND 2-Oxopropansaeure ChemIDplus 2-Oxopropionsaeure ChemIDplus 2-ketopropionic acid ChemIDplus 2-oxopropanoic acid ChEBI Acetylformic acid HMDB BTS ChemIDplus Brenztraubensaeure ChEBI CH3COCOOH NIST_Chemistry_WebBook Pyroracemic acid KEGG_COMPOUND acetylformic acid NIST_Chemistry_WebBook acide pyruvique ChEBI alpha-Oxopropionsaeure ChemIDplus alpha-ketopropionic acid NIST_Chemistry_WebBook 0 C3H8 InChI=1S/C3H8/c1-3-2/h3H2,1-2H3 ATUOYWHBWRKTHZ-UHFFFAOYSA-N 44.09562 44.06260 CCC Beilstein:1730718 CAS:74-98-6 Gmelin:25044 propane chebi_ontology CH3-CH2-CH3 E944 Propan CHEBI:32879 propane propane Beilstein:1730718 Beilstein CAS:74-98-6 ChemIDplus CAS:74-98-6 NIST Chemistry WebBook Gmelin:25044 Gmelin propane IUPAC propane UniProt CH3-CH2-CH3 IUPAC E944 ChEBI Propan ChEBI A cyclically conjugated molecular entity with a stability (due to delocalization) significantly greater than that of a hypothetical localized structure (e.g. Kekule structure) is said to possess aromatic character. aromatic compounds aromatic molecular entity chebi_ontology aromatics aromatische Verbindungen CHEBI:33655 aromatic compound aromatic compound aromatic compounds IUPAC aromatic molecular entity IUPAC aromatics ChEBI aromatische Verbindungen ChEBI A straight chain alkane composed of 4 carbon atoms. 0 C4H10 InChI=1S/C4H10/c1-3-4-2/h3-4H2,1-2H3 IJDNQMDRQITEOD-UHFFFAOYSA-N 58.12220 58.07825 CCCC CHEBI:22945 CHEBI:25462 CHEBI:44430 Beilstein:969129 CAS:106-97-8 Gmelin:1148 PDBeChem:NBU PMID:24179026 Reaxys:969129 Wikipedia:Butane butane chebi_ontology E 943a E-943a E943a N-BUTANE R-600 n-Butan n-C4H10 n-butane CHEBI:37808 butane butane Beilstein:969129 Beilstein CAS:106-97-8 ChemIDplus CAS:106-97-8 NIST Chemistry WebBook Gmelin:1148 Gmelin PMID:24179026 Europe PMC Reaxys:969129 Reaxys butane IUPAC butane UniProt E 943a ChEBI E-943a ChEBI E943a ChEBI N-BUTANE PDBeChem R-600 ChEBI n-Butan ChEBI n-C4H10 NIST_Chemistry_WebBook n-butane NIST_Chemistry_WebBook An optically active form of lactic acid having (S)-configuration. 0 C3H6O3 InChI=1S/C3H6O3/c1-2(4)3(5)6/h2,4H,1H3,(H,5,6)/t2-/m0/s1 JVTAAEKCZFNVCJ-REOHCLBHSA-N 90.07794 90.03169 C[C@H](O)C(O)=O Beilstein:1720251 CAS:79-33-4 Gmelin:362717 HMDB:HMDB0000190 KEGG:C00186 KNApSAcK:C00001191 PMID:21996028 PMID:22336740 PMID:22367529 PMID:22424924 PMID:22443585 PMID:22461545 PMID:22534372 PMID:22538963 PMID:22578598 Reaxys:1720251 Wikipedia:Lactic_Acid (2S)-2-hydroxypropanoic acid chebi_ontology (+)-lactic acid (S)-(+)-lactic acid (S)-2-hydroxypropanoic acid (S)-2-hydroxypropionic acid L-(+)-alpha-hydroxypropionic acid L-(+)-lactic acid L-Lactic acid L-Milchsaeure CHEBI:422 (S)-lactic acid Lactic Beilstein:1720251 Beilstein CAS:79-33-4 ChemIDplus CAS:79-33-4 KEGG COMPOUND CAS:79-33-4 NIST Chemistry WebBook Gmelin:362717 Gmelin PMID:21996028 Europe PMC PMID:22336740 Europe PMC PMID:22367529 Europe PMC PMID:22424924 Europe PMC PMID:22443585 Europe PMC PMID:22461545 Europe PMC PMID:22534372 Europe PMC PMID:22538963 Europe PMC PMID:22578598 Europe PMC Reaxys:1720251 Reaxys (2S)-2-hydroxypropanoic acid IUPAC (+)-lactic acid NIST_Chemistry_WebBook (S)-(+)-lactic acid NIST_Chemistry_WebBook (S)-2-hydroxypropanoic acid NIST_Chemistry_WebBook (S)-2-hydroxypropionic acid NIST_Chemistry_WebBook L-(+)-alpha-hydroxypropionic acid ChemIDplus L-(+)-lactic acid NIST_Chemistry_WebBook L-Lactic acid KEGG_COMPOUND L-Milchsaeure ChEBI A substance that removes electrons from another reactant in a redox reaction. chebi_ontology oxidant oxidants oxidiser oxidisers oxidising agents oxidizer oxidizers oxidizing agent oxidizing agents CHEBI:63248 oxidising agent oxidising agent oxidant ChEBI oxidants ChEBI oxidiser ChEBI oxidisers ChEBI oxidising agents ChEBI oxidizer ChEBI oxidizers ChEBI oxidizing agent ChEBI oxidizing agents ChEBI A plot of absorbance vs. wavelength obtained by measuring the amount of radiation absorbed by a sample as a function of the wavelength of incident radiation. absorbance spectra absorbance spectrum absorption spectra CHMO:0000801 Absorbance absorption spectrum A plot of absorbance vs. wavelength obtained by measuring the amount of radiation absorbed by a sample as a function of the wavelength of incident radiation. https://orcid.org/0000-0001-5985-7429 A plot of reflectance (%) vs. wavenumber obtained by measuring the amount of radiation reflected by a sample. reflectance spectra CHMO:0000937 Reflectance reflectance spectrum A plot of reflectance (%) vs. wavenumber obtained by measuring the amount of radiation reflected by a sample. https://doi.org/10.1021/j100173a016 A separation method where the components are distributed between two phases, one of which is stationary, while the other moves in a definite direction. FIX:0000053 analytical chromatography chromatographic analysis preparative chromatography CHMO:0001000 Chromatography chromatography A separation method where the components are distributed between two phases, one of which is stationary, while the other moves in a definite direction. https://doi.org/10.1351/goldbook.C01075 An area of land which is used for the cultivation of crops or grazing of livestock, including any agricultural constructions therein. agricultural site FTT:45 FTT:58 FTT:59 FTT:69 Geonames:S.FRM Geonames:S.FRMS Geonames:S.RNCH TGN:54011 https://en.wikipedia.org/wiki/Farm FARM farm farms farmstead ranch Farm farm An area of land which is used for the cultivation of crops or grazing of livestock, including any agricultural constructions therein. USGS:SDTS agricultural site ADL:FTT FARM USGS:SDTS farm Geonames:feature farms Geonames:feature farmstead ADL:FTT ranch Geonames:feature ranch Getty:TGN ranch USGS:SDTS A facility in which fish are raised commercially in tanks or enclosures, usually for food. FTT:123 FTT:694 https://en.wikipedia.org/wiki/Fish_farm aquacultural site fishery Fishery fish farm A facility in which fish are raised commercially in tanks or enclosures, usually for food. https://en.wikipedia.org/wiki/Fish_farm aquacultural site ADL:FTT fishery ADL:FTT A building in which a business presents a selection of goods and offers to trade or sell them to customers for money or other goods. https://en.wikipedia.org/wiki/Shopping retail shop retail store retailer Retailer shop A building in which a business presents a selection of goods and offers to trade or sell them to customers for money or other goods. https://en.wikipedia.org/wiki/Shopping A facility in which non-human animals are slaughtered and processed for human consumption. slaughter plant slaughterhouse butchery meat processing building SlaughterHouse abattoir A facility in which non-human animals are slaughtered and processed for human consumption. https://en.wikipedia.org/wiki/Slaughterhouse A research facility in which systems of manufactured products control internal conditions and in which scientific or technological research, experiments, and measurement may be performed. research laboratory Laboratory laboratory facility A research facility in which systems of manufactured products control internal conditions and in which scientific or technological research, experiments, and measurement may be performed. https://en.wikipedia.org/wiki/Laboratory Chickens, turkeys, quail, ducks, and geese are only called poultry if they aren't reared in the wild. A domesticated bird that is kept by humans for its eggs, meat or feathers. 2022-08-25T10:01:00Z Poultry poultry An agency food product type is a class of food product defined by an agency or consortium. Damion Dooley http://langual.org http://www.langual.org/langual_thesaurus.asp?termid=A0361 This class is designed to hold 3rd party food classification schemes which are being mapped to FoodOn classes using the 'has member' relation. The two hierarchies are not melded into a subclass polyhierarchy because of possible logical inconsistencies in the agency schemes. The hierarchies of agency schemes are as true to their agency representation as possible. Sampletype agency food product type Cattle (colloquially cows) are the most common type of large domesticated ungulates. They are a prominent modern member of the subfamily *Bovinae*, are the most widespread species of the genus *Bos*, and are most commonly classified collectively as *Bos taurus*... with three subspecies: *Bos taurus primigenius, Bos taurus indicus, Bos taurus taurus*. cattle ITIS:183838 MSW3:14200687 Bos taurus Linnaeus, 1758 bovine cattle cow dairy cow domestic cattle domestic cow ox oxen Bos taurus Cattle A position, site, or point in space where something can be found. C25341 Spatial Concept Location C0450429 CareLex A spatial region or named place. Location LOC Location Location Location A position, site, or point in space where something can be found. NCI A spatial region or named place. CareLex LOC PT CDISC Location PT CareLex Location PT NCI Location SY caDSR Address A text string identifier for a location to which e-mail can be delivered. C42775 Intellectual Product E-mail Address C1705961 CDISC A text string identifier for a location to which electronic mail can be delivered. (NCI) Email_Address E-mail E-mail Address Electronic Mail Address Email Email Address E-mail Address E-mail Address A text string identifier for a location to which e-mail can be delivered. NCI A text string identifier for a location to which electronic mail can be delivered. (NCI) CDISC E-mail SY NCI E-mail Address PT CDISC E-mail Address PT NCI Electronic Mail Address SY NCI Email SY NCI Email Address SY CDISC Email Address SY NCI A character string that identifies an internet resource; URIs can be either a uniform resource locator (URL) or uniform resource name (URN). C42778 Intellectual Product Uniform Resource Identifier C1548524 CareLex A character string that can identify any kind of resource on the Internet, including images, text, video, audio and programs. The most common example of a URI is a URL. Uniform_Resource_Identifier URI Uniform Resource Identifier Uniform Resource Identifier Uniform Resource Identifier A character string that identifies an internet resource; URIs can be either a uniform resource locator (URL) or uniform resource name (URN). NCI A character string that can identify any kind of resource on the Internet, including images, text, video, audio and programs. The most common example of a URI is a URL. CareLex URI AB NCI URI PT CareLex URI SY CareLex Uniform Resource Identifier PT NCI Uniform Resource Identifier SY CareLex A coordinated set of actions and observations designed to generate data, with the ultimate goal of discovery or hypothesis testing. C42790 Research Activity Experiment C0681814 BRIDG A Research Project whose objectives are to generate hypotheses or lead to discoveries. EXAMPLE(S): Gene expression experiment intended to discover novel genetic biomarkers. Physicochemical characterization of nanoparticles. OTHER NAME(S): NOTE(S): Experiment Experiment Experiment Experiment A coordinated set of actions and observations designed to generate data, with the ultimate goal of discovery or hypothesis testing. NCI A Research Project whose objectives are to generate hypotheses or lead to discoveries. EXAMPLE(S): Gene expression experiment intended to discover novel genetic biomarkers. Physicochemical characterization of nanoparticles. OTHER NAME(S): NOTE(S): BRIDG 5.3 Experiment PT BRIDG 5.3 Experiment PT NCI A person or group with authority to allot or deal out or apportion. C48289 Human Distributor C1546931 BRIDG FDA An organization who takes part in the distribution chain for a product, as it is moved from its producer to the ultimate consumer. NOTE(S): In this sense, the retailer is a distributor as well, the last one. Distributor DISTRIBUTOR Distributor Distributor Distributor A person or group with authority to allot or deal out or apportion. NCI An organization who takes part in the distribution chain for a product, as it is moved from its producer to the ultimate consumer. NOTE(S): In this sense, the retailer is a distributor as well, the last one. BRIDG 3.0.3 DISTRIBUTOR PT FDA ICSR Distributor PT BRIDG 3.0.3 Distributor PT FDA ICSR-CVM Distributor PT NCI A substance with a defined atomic or molecular structure that results from, or takes part in, reactions involving changes in its structure, composition, or properties. C48807 Substance Chemical C0220806 FDA A substance made up of elements, such as hydrogen or sodium. A substance with a defined atomic or molecular structure that results from, or takes part in, reactions involving changes in its structure, composition, or properties. Chemical Chemical Chemically chemical Chemical Chemical A substance with a defined atomic or molecular structure that results from, or takes part in, reactions involving changes in its structure, composition, or properties. NCI A substance made up of elements, such as hydrogen or sodium. NCI-GLOSS A substance with a defined atomic or molecular structure that results from, or takes part in, reactions involving changes in its structure, composition, or properties. PQCMC Chemical PT FDA PQCMC Chemical PT NCI Chemical SY caDSR Chemically AD NCI chemical PT NCI-GLOSS CDR0000643008 A string unique to a time duration of 24 hours between 2 successive midnights defined by the local time zone. The specific representation of a date will depend on which calendar convention is in force as well as local ordering conventions. C48871 Qualitative Concept Date Data Type C1547350 BRIDG Date_Value Date Date Data Type Date Representation Date Value date Date Date Data Type A string unique to a time duration of 24 hours between 2 successive midnights defined by the local time zone. The specific representation of a date will depend on which calendar convention is in force as well as local ordering conventions. NCI from On-Line Dictionary of Computing Date SY NCI Date Data Type PT NCI Date Representation SY NCI Date Value SY NCI date PT BRIDG 3.0.3 An object contrived for a specific purpose. C62103 Manufactured Object Device Device C0699733 CTRP NICHD An object that has a specific use. In medicine, wheelchairs, pumps, and artificial limbs are examples of devices. Device Device device Device Device An object contrived for a specific purpose. NCI An object that has a specific use. In medicine, wheelchairs, pumps, and artificial limbs are examples of devices. NCI-GLOSS Device DN CTRP Device PT NCI Device PT NICHD device PT NCI-GLOSS CDR0000635288 A person, enterprise, or entity that prepares products for marketing or distribution. C92651 Organization Processor C2985233 BRIDG An organization defined as being responsible for making, assembling, refurbishing, packaging, etc. a product. EXAMPLE(S): The maker identified on the product's box. NOTE(S): In some cases, the responsible organization will actually be listed as a reprocessor of the item. Processor Processor Processor A person, enterprise, or entity that prepares products for marketing or distribution. NCI An organization defined as being responsible for making, assembling, refurbishing, packaging, etc. a product. EXAMPLE(S): The maker identified on the product's box. NOTE(S): In some cases, the responsible organization will actually be listed as a reprocessor of the item. BRIDG 3.0.3 Processor PT BRIDG 3.0.3 Processor PT NCI imaging assay An assay that produces a picture of an entity. PlanAndPlannedProcess Branch OBI branch derived ImagingSpectroscopy imaging assay organization PMID: 16353909.AAPS J. 2005 Sep 22;7(2):E274-80. Review. The joint food and agriculture organization of the United Nations/World Health Organization Expert Committee on Food Additives and its role in the evaluation of the safety of veterinary drug residues in foods. An entity that can bear roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members. BP: The definition summarizes long email discussions on the OBI developer, roles, biomaterial and denrie branches. It leaves open if an organization is a material entity or a dependent continuant, as no consensus was reached on that. The current placement as material is therefore temporary, in order to move forward with development. Here is the entire email summary, on which the definition is based: 1) there are organization_member_roles (president, treasurer, branch editor), with individual persons as bearers 2) there are organization_roles (employer, owner, vendor, patent holder) 3) an organization has a charter / rules / bylaws, which specify what roles there are, how they should be realized, and how to modify the charter/rules/bylaws themselves. It is debatable what the organization itself is (some kind of dependent continuant or an aggregate of people). This also determines who/what the bearer of organization_roles' are. My personal favorite is still to define organization as a kind of 'legal entity', but thinking it through leads to all kinds of questions that are clearly outside the scope of OBI. Interestingly enough, it does not seem to matter much where we place organization itself, as long as we can subclass it (University, Corporation, Government Agency, Hospital), instantiate it (Affymetrix, NCBI, NIH, ISO, W3C, University of Oklahoma), and have it play roles. This leads to my proposal: We define organization through the statements 1 - 3 above, but without an 'is a' statement for now. We can leave it in its current place in the is_a hierarchy (material entity) or move it up to 'continuant'. We leave further clarifications to BFO, and close this issue for now. PERSON: Alan Ruttenberg PERSON: Bjoern Peters PERSON: Philippe Rocca-Serra PERSON: Susanna Sansone GROUP: OBI Organisation organization SIO_000089 data set A dataset is a data item that is a collection of data items. http://www.w3.org/ns/dcat#Dataset Dataset dataset SIO_000770 A standard deviation (represented by the symbol σ) is the quantity of variation from the average (mean, or expected value). StandardDeviation standard deviation SIO_001109 arithmeritic mean average A mean is the central tendency of a collection of numbers taken as the sum of the numbers divided by the size of the collection. Mean mean Generally, land and water owned by individuals or corporations as opposed to the state; in French civil law, any government property capable of being owned by non-public entities, which cannot be seized and which is restricted to the stipulated ownership and use. Domain TVC λ Wavelength golflengte wavelength The thing whose property is being estimated or calculated in the course of an Observation to arrive at a Result or whose property is being manipulated by an Actuator, or which is being sampled or transformed in an act of Sampling. Feature Of Interest FeatureOfInterest The thing whose property is being estimated or calculated in the course of an Observation to arrive at a Result or whose property is being manipulated by an Actuator, or which is being sampled or transformed in an act of Sampling. When measuring the height of a tree, the height is the observed ObservableProperty, 20m may be the Result of the Observation, and the tree is the FeatureOfInterest. A window is a FeatureOfInterest for an automatic window control Actuator. The Result of an Observation, Actuation, or act of Sampling. To store an observation's simple result value one can use the hasSimpleResult property. Result The Result of an Observation, Actuation, or act of Sampling. To store an observation's simple result value one can use the hasSimpleResult property. The value 20 as the height of a certain tree together with the unit, e.g., Meter. 1 A Sample is the result from an act of Sampling. Feature which is intended to be representative of a FeatureOfInterest on which Observations may be made. Physical samples are sometimes known as 'specimens'. Samples are artifacts of an observational strategy, and have no significant function outside of their role in the observation process. The characteristics of the samples themselves are of little interest, except perhaps to the manager of a sampling campaign. A Sample is intended to sample some FatureOfInterest, so there is an expectation of at least one isSampleOf property. However, in some cases the identity, and even the exact type, of the sampled feature may not be known when observations are made using the sampling features. Sample Feature which is intended to be representative of a FeatureOfInterest on which Observations may be made. A 'station' is essentially an identifiable locality where a sensor system or Procedure may be deployed and an observation made. In the context of the observation model, it connotes the 'world in the vicinity of the station', so the observed properties relate to the physical medium at the station, and not to any physical artifact such as a mooring, buoy, benchmark, monument, well, etc. A statistical sample is often designed to be characteristic of an entire population, so that observations can be made regarding the sample that provide a good estimate of the properties of the population. A transient sample, such as a ships-track or flight-line, might be identified and described, but is unlikely to be revisited exactly. Device, agent (including humans), or software (simulation) involved in, or implementing, a Procedure. Sensors respond to a stimulus, e.g., a change in the environment, or input data composed from the results of prior Observations, and generate a Result. Sensors can be hosted by Platforms. Sensor Device, agent (including humans), or software (simulation) involved in, or implementing, a Procedure. Sensors respond to a stimulus, e.g., a change in the environment, or input data composed from the results of prior Observations, and generate a Result. Sensors can be hosted by Platforms. Accelerometers, gyroscopes, barometers, magnetometers, and so forth are Sensors that are typically mounted on a modern smart phone (which acts as Platform). Other examples of sensors include the human eyes. A quality of an entity. An aspect of an entity that is intrinsic to and cannot exist without the entity. Property A quality of an entity. An aspect of an entity that is intrinsic to and cannot exist without the entity. An FTIR sensor is a device that uses Fourier-transform infrared spectroscopy (FTIR) technology to detect and analyze the infrared absorption spectra of various substances. Fourier Transform Infrared (FTIR) analysis is a spectroscopic technique that makes use of the naturally occurring electromagnetic spectrum defined by the wavelengths between 2,500nm and 25,000nm. FTIR The FT/IR-6200 is a Fourier Transform Infrared Spectrometer manufactured by the company JASCO. It is a high-performance research-grade spectrometer that is used for the analysis of various samples in chemistry, materials science, and biology. FTIR-6200 The FOX3000 e-nose device is an electronic nose system developed by Alpha MOS. The Fox 3000 provides either 12 sensors of same technology or 12 sensors of different type. Fox3000 BFD-100 is a handheld sensor of FreshDetect company. It is capable of determining bacterial contamination in pork in real time using a non-invasive, fluorescence spectroscopy measurement technique. This handheld device can be used to determine the total viable count in fresh meat in 3–5 seconds with laboratory quality reliability and accuracy. FreshDetectBFD-100 FreshDetect is a German company engaged in the manufacturing and supply of handheld sensors for analyzing microbiological quality to determine the freshness of meat and other food products in real time. FreshDetect Combination of Gas Chromatography and Mass Spectrometry. A mass spectrometer is typically utilized in one of two ways: full scan or selective ion monitoring (SIM). The typical GC-MS instrument is capable of performing both functions either individually or concomitantly, depending on the setup of the particular instrument (Sounds like a parameter to supply). The columns represent for certain substances. As such, they are mappable to concepts (as opposed to the spectra where column headers are potentially infinite). GCMS JASCO LC-NET is a high-performance liquid chromatography (HPLC) system developed by JASCO Corporation JASCOLC-NET Multispectral imaging (MSI) is the system that involves capturing images of a scene or object over multiple discrete wavelength bands and extracting spectral content from that data. MSI Near Infrared, or NIR, spectroscopy is an analysis technique for fast, accurate food testing. NIR measurement is a widely-used method in the food and drink and agricultural industries, and it is a convenient, low cost alternative to chemical analysis. NIR The NIRvascan is the world's first affordable and portable smart near infrared spectrometer with an integrated tungsten halogen light source built in. NIRvascan Unknown A spectral imaging instrument designed for the fast and accurate determination of colour, texture, and chemical composition VideometerLab An electronic nose is an electronic sensing device intended to detect odors or flavors. The expression "electronic sensing" refers to the capability of reproducing human senses using sensor arrays and pattern recognition systems. e-nose An HPLC sensor is a device that is used in conjunction with a high-performance liquid chromatography (HPLC) system to detect and measure the concentration of various chemical compounds in a sample. HPLC LY2-AA is LY type e-nose sensor which has types of substances including Ethanol, acetone, ammonia LY2/AA LY2-G is LY type e-nose sensor which has types of substances including Ammonia, amine compounds, carbon and oxygen gompounds LY2/G LY2-GH is LY type e-nose sensor which has types of substances including Chlorine, fluorine, nitrous compounds, sulfides LY2/GH LY2-LG is LY type e-nose sensor which has types of substances including Chlorine, fluorine, nitrous compounds, sulfides LY2/LG LY2-gCT is LY type e-nose sensor which has types of substances including Propane, Butane LY2/gCT LY2-gCTL is LY type e-nose sensor which has types of substances including hydrogen sulfide LY2/gCTL P10-1 is P type e-nose sensor which has types of substances including Nonpolar, hydrocarbon, ammonia, chlorine P10/1 P10-2 is P type e-nose sensor which has types of substances including Nonpolar, Methane, ethane P10/2 P30/1 P30/2 P40-1 is P type e-nose sensor which has types of substances including Chlorine, fluorine P40/1 P40/2 PA-2 is P type e-nose sensor which has types of substances including Ethanol, ammonia, amine compounds PA/2 T30/1 is T type e-nose sensor which has types of substances including Hydrocarbons, ammonia, ethanol T30/1 T40/2 T70-2 is T type e-nose sensor which has types of substances including Toluene, xylene, carbon monoxide T70/2 1 1 1 Represents the measured value made over a property. It is also linked to the unit of measure in which the value is expressed and the timestamp of the measurement. Represents the measured value made over a property. It is also linked to the unit of measure in which the value is expressed and the timestamp of the measurement. Measurement The unit of measure is a standard for measurement of a quantity, such as a Property. For example, Power is a property and Watt is a unit of power that represents a definite predetermined power: when we say 10 Watt, we actually mean 10 times the definite predetermined power called "watt". Our definition is based on the definition of unit of measure in the Ontology of units of Measure (OM). We propose here a list of some units of measure that are relevant for the purpose of SAREF, but this list can be extended, also using some other ontologies rather than the Ontology of units of Measure (OM). The unit of measure is a standard for measurement of a quantity, such as a Property. For example, Power is a property and Watt is a unit of power that represents a definite predetermined power: when we say 10 Watt, we actually mean 10 times the definite predetermined power called "watt". Unit of measure UnitOfMeasure