### A Pluto.jl notebook ###
# v0.19.27

using Markdown
using InteractiveUtils

# This Pluto notebook uses @bind for interactivity. When running this notebook outside of Pluto, the following 'mock version' of @bind gives bound variables a default value (instead of an error).
macro bind(def, element)
    quote
        local iv = try Base.loaded_modules[Base.PkgId(Base.UUID("6e696c72-6542-2067-7265-42206c756150"), "AbstractPlutoDingetjes")].Bonds.initial_value catch; b -> missing; end
        local el = $(esc(element))
        global $(esc(def)) = Core.applicable(Base.get, el) ? Base.get(el) : iv(el)
        el
    end
end

# ╔═╡ 3c88aa50-47ec-4a23-bdbd-da04ac05100a
begin
	using ClimateModels, PlutoUI, CairoMakie
	md"""_Done with loading packages_"""
end

# ╔═╡ 67365028-7acd-4974-aaeb-c472981346f5
module myinclude 
	using ClimateModels, IniFile, PlutoUI, CairoMakie, Suppressor, Downloads
	include("Hector_module.jl") 
end

# ╔═╡ b5caddd5-4b34-4a28-af7d-aaea247bd2a5
md"""# Hector Global Climate (C++)

Here we setup, run and plot a simple global climate carbon-cycle model called [Hector](https://jgcri.github.io/hector/index.html). 

Hector reproduces the global historical trends of atmospheric [CO2], radiative forcing, and surface temperatures. It simulates various [Shared Socioeconomic Pathways (SSPs)](https://en.wikipedia.org/wiki/Shared_Socioeconomic_Pathways) defined by the Intergovernmental Panel on Climate Change (IPCC).

Documentation about Hector can be found [here](https://jgcri.github.io/hector/articles/manual/), [here](https://pyhector.readthedocs.io/en/latest/index.html), and [here](https://jgcri.github.io/hectorui/index.html).
"""

# ╔═╡ fbd107dd-56e9-4a86-9737-18fd89d6fb37
md"""#### Source Code"""

# ╔═╡ d048aac3-42c3-447a-8221-6d5ba6299369
begin
	demo=myinclude.demo
	md"""_Done with loading Hector module_"""
end

# ╔═╡ 8e2c86e7-f561-4157-af76-410f85897b46
md"""## The Four Scenarios"""

# ╔═╡ 37a9f083-d9ae-4506-b33c-2f9c6da5314e
md"""## Model Interface

Here we define a new concrete type called `Hector_config`. The rest of the `ClimateModels.jl` interface implementation for this new type is documented below (see `Model Interface details`). 
"""

# ╔═╡ 448424ee-c2d0-4957-9763-4fa467f68992
begin
	H=demo.Hector_config()
	setup(H)

	exe=joinpath(tempdir(),"hector")
	if isfile(exe)
		demo.build(H; exe=exe)
	else
		demo.build(H)
		exe=joinpath(pathof(H),"hector","src","hector")
	end

	md"""The compiled Hector executable is at
	
	$(exe)
	"""
end

# ╔═╡ 91c60316-8689-4443-b439-eacb95efb26f
#readdir(MC)
exe

# ╔═╡ 95fcd1a0-60ad-465f-b5c0-35bb8ea044c2
md"""## Setup, Build, and Launch"""

# ╔═╡ 7f7cb33a-e02a-4450-8d58-eadbb5f29297
begin
	MC=demo.Hector_config()
	demo.setup(MC)
	demo.build(MC; exe=exe)
	demo.launch(MC)
	"Done with setup, build, launch sequence."
end

# ╔═╡ 1bc9b369-1233-46e2-9cfc-8c0db286d352
let
    f_all=demo.plot_all_scenarios(MC)
    save(joinpath(pathof(MC),"tas_scenarios.png"), f_all)
    f_all
end

# ╔═╡ 5a731e2b-ff27-45fc-bc63-4988e484d7d2
PlutoUI.with_terminal() do
		show(MC)
end

# ╔═╡ 5c2381dc-55d6-4f4b-a1c0-a7a777283621
MC

# ╔═╡ 3e66a5bb-338c-49fb-b169-a6edb4c43949
md"""## Read Output And Plot"""

# ╔═╡ a5336163-72e5-48b4-8156-224728ccd518
begin
	tmp=demo.Hector_config(configuration="hector_ssp245.ini",folder=MC.folder,ID=MC.ID)
	put!(tmp,demo.Hector_launch)
	launch(tmp)

	f,a,year,tas=demo.plot(MC,"tas"); 
	Legend(f[1, 2], a)
	f
end

# ╔═╡ d033d4f3-409a-4b6e-bdc7-f881989b0653
md"""## Inspect Model Parameters"""

# ╔═╡ 3706903e-10b4-11ec-3eaf-8df6df1c23c3
begin
	nml=demo.read_nml(MC)
	PlutoUI.with_terminal() do
		show(nml)
	end
end

# ╔═╡ 909a8669-9324-4982-bac7-9d7d112b5ab8
begin
	𝑷=demo.DataFrame(group=String[],name=String[],default=Float64[],factors=StepRangeLen[],
		long_name=String[],unit=String[])
	push!(𝑷,("simpleNbox","beta",0.36,0.2:0.2:2,"CO2 fertilization factor","unitless"))
	push!(𝑷,("temperature","alpha",1,0.2:0.2:2,"Aerosol forcing scaling factor","unitless"))
	push!(𝑷,("temperature","diff",2.3,0.2:0.2:2,"Ocean heat diffusivity","cm2/s"))
	push!(𝑷,("temperature","S",3.5,0.2:0.2:2,"Equilibrium climate sensitivity","degC"))
	push!(𝑷,("simpleNbox","C0",588.071/2.13,0.2:0.2:2,"Preindustrial CO2 conc,","ppmv CO2"))
	#- atmos_c=588.071                 ; Pg C in CO2, from Murakami et al. (2010)
	#- ;C0=276                                 ; another way to specify, in ppmv
	#- 1 ppm by volume of atmosphere CO2 = 2.13 Gt C
	push!(𝑷,("simpleNbox","q10_rh",2.0,0.2:0.2:2,"Temp. sensitivity factor (Q10)","unitless"))
	push!(𝑷,("temperature","volscl",1,0.2:0.2:2,"Volcanic forcing scaling factor","unitless"))
	𝑉=[𝑷.default[i]*𝑷.factors[i] for i in 1:length(𝑷.default)]
	𝑷
	
	md"""## Modify Parameters & Rerun
	
	Let's consider the same sbuset of model parameters as done in [HectorUI](https://jgcri.github.io/hectorui/index.html). 
	
	Here, we start from $(MC.configuration) but with a `Equilibrium climate sensitivity` of 3.5 instead of 3.
	"""
end

# ╔═╡ cf70e31c-e95a-4768-b11b-0c25eba2a736
md"""

Parameter name | Value | unit
----|----|----
$(𝑷.long_name[1]) | $(@bind 𝑄_1 NumberField(𝑉[1]; default=𝑷.default[1]))  |  $(𝑷.unit[1])
$(𝑷.long_name[2]) | $(@bind 𝑄_2 NumberField(𝑉[2]; default=𝑷.default[2]))  |  $(𝑷.unit[2])
$(𝑷.long_name[3]) | $(@bind 𝑄_3 NumberField(𝑉[3]; default=𝑷.default[3]))  |  $(𝑷.unit[3])
$(𝑷.long_name[4]) | $(@bind 𝑄_4 NumberField(𝑉[4]; default=𝑷.default[4]))  |  $(𝑷.unit[4])
$(𝑷.long_name[5]) | $(@bind 𝑄_5 NumberField(𝑉[5]; default=𝑷.default[5]))  |  $(𝑷.unit[5])
$(𝑷.long_name[6]) | $(@bind 𝑄_6 NumberField(𝑉[6]; default=𝑷.default[6]))  |  $(𝑷.unit[6])
$(𝑷.long_name[7]) | $(@bind 𝑄_7 NumberField(𝑉[7]; default=𝑷.default[7]))  |  $(𝑷.unit[7])

$(@bind update_param PlutoUI.Button("Update & Rerun Model"))

"""

# ╔═╡ 95301453-5c24-4884-9eab-098f8ce40c0f
begin
	#modify parameter values within nml
	𝑄=(𝑄_1,𝑄_2,𝑄_3,𝑄_4,𝑄_5,𝑄_6,𝑄_7)
	[nml.sections[𝑷.group[i]][𝑷.name[i]]=𝑄[i] for i in 1:length(𝑄)]
	[nml.sections[𝑷.group[i]][𝑷.name[i]] for i in 1:length(𝑄)]
	md"""Would rerun with parameters : $(𝑄)"""
end

# ╔═╡ 3711d123-0e16-486b-a4ba-c5ac6de93692
begin
	#rerun model with updated parameter file
	update_param
	
	pth1=pathof(MC)
	conf=joinpath(pth1,"log","custom_parameters.nml")
	open(conf, "w+") do io
		write(io, nml)
	end
	log(MC,"update custom_parameters.nml (or skip)",fil="custom_parameters.nml")
	myconf=joinpath(pth1,"hector","inst","input","custom_parameters.nml")	
	cp(conf,myconf;force=true)
	
	myMC=demo.Hector_config(configuration="custom_parameters.nml",folder=MC.folder,ID=MC.ID)
	put!(myMC,demo.Hector_launch)
	demo.launch(myMC)
	"rerun completed"
end

# ╔═╡ c23c4065-faf5-4822-a082-ff05e63e180b
myconf

# ╔═╡ 76763a71-a8d3-472a-bb27-577a88ff637c
begin
	g,b,_,_=demo.plot(myMC,"tas")
	lines!(b,year,tas,label=MC.configuration,lw=3)
	Legend(g[1, 2], b)
    save(joinpath(pathof(MC),"tas_custom.png"), g)
	g
end

# ╔═╡ 68e4cf96-c335-4db1-b527-07043cacbc00
md"""## Workflow Log (~git log)"""

# ╔═╡ 2c2ec4ba-e9ed-4695-a695-4549ee84e314
Dump(log(MC))

# ╔═╡ acd184ff-dfce-496a-afa2-0cac1fc5fa98
TableOfContents()




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[[deps.XSLT_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]
git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a"
uuid = "aed1982a-8fda-507f-9586-7b0439959a61"
version = "1.1.34+0"

[[deps.Xorg_libX11_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"]
git-tree-sha1 = "afead5aba5aa507ad5a3bf01f58f82c8d1403495"
uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc"
version = "1.8.6+0"

[[deps.Xorg_libXau_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "6035850dcc70518ca32f012e46015b9beeda49d8"
uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec"
version = "1.0.11+0"

[[deps.Xorg_libXdmcp_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "34d526d318358a859d7de23da945578e8e8727b7"
uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05"
version = "1.1.4+0"

[[deps.Xorg_libXext_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "b7c0aa8c376b31e4852b360222848637f481f8c3"
uuid = "1082639a-0dae-5f34-9b06-72781eeb8cb3"
version = "1.3.4+4"

[[deps.Xorg_libXrender_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "19560f30fd49f4d4efbe7002a1037f8c43d43b96"
uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa"
version = "0.9.10+4"

[[deps.Xorg_libpthread_stubs_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "8fdda4c692503d44d04a0603d9ac0982054635f9"
uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74"
version = "0.1.1+0"

[[deps.Xorg_libxcb_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"]
git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d"
uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b"
version = "1.15.0+0"

[[deps.Xorg_xtrans_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77"
uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10"
version = "1.5.0+0"

[[deps.Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
version = "1.2.13+0"

[[deps.isoband_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "51b5eeb3f98367157a7a12a1fb0aa5328946c03c"
uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4"
version = "0.2.3+0"

[[deps.libaom_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4"
uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b"
version = "3.4.0+0"

[[deps.libass_jll]]
deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
git-tree-sha1 = "5982a94fcba20f02f42ace44b9894ee2b140fe47"
uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0"
version = "0.15.1+0"

[[deps.libblastrampoline_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
version = "5.8.0+0"

[[deps.libfdk_aac_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "daacc84a041563f965be61859a36e17c4e4fcd55"
uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280"
version = "2.0.2+0"

[[deps.libpng_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c"
uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f"
version = "1.6.38+0"

[[deps.libsixel_jll]]
deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "libpng_jll"]
git-tree-sha1 = "d4f63314c8aa1e48cd22aa0c17ed76cd1ae48c3c"
uuid = "075b6546-f08a-558a-be8f-8157d0f608a5"
version = "1.10.3+0"

[[deps.libvorbis_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"]
git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c"
uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a"
version = "1.3.7+1"

[[deps.nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
version = "1.48.0+0"

[[deps.p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
version = "17.4.0+0"

[[deps.x264_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4fea590b89e6ec504593146bf8b988b2c00922b2"
uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a"
version = "2021.5.5+0"

[[deps.x265_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "ee567a171cce03570d77ad3a43e90218e38937a9"
uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76"
version = "3.5.0+0"
"""

# ╔═╡ Cell order:
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# ╟─68e4cf96-c335-4db1-b527-07043cacbc00
# ╟─2c2ec4ba-e9ed-4695-a695-4549ee84e314
# ╟─acd184ff-dfce-496a-afa2-0cac1fc5fa98
# ╟─00000000-0000-0000-0000-000000000001
# ╟─00000000-0000-0000-0000-000000000002