21:07:2015 00:00
unipathway_ontology
1.2
anne.morgat@isb-sib.ch
UniPathway Release 2015_03
definition
definition
If R <- P o Q is a defining property chain axiom, then it also holds that R -> P o Q. Note that this cannot be expressed directly in OWL
is a defining property chain axiom
If R <- P o Q is a defining property chain axiom, then (1) R -> P o Q holds and (2) Q is either reflexive or locally reflexive. A corollary of this is that P SubPropertyOf R.
is a defining property chain axiom where second argument is reflexive
FORMULA
InChI
unipathway_ontology
uniprot_super_pathway
true
true
UniProt super-pathway
synonym_type_property
database_cross_reference
has_exact_synonym
has_obo_format_version
has_obo_namespace
has_related_synonym
has_synonym_type
id
shorthand
is part of
my brain is part of my body (continuant parthood, two material entities)
my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)
this day is part of this year (occurrent parthood)
a core relation that holds between a part and its whole
Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other.
Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime
Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.)
A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'.
part_of
BFO:0000050
unipathway_ontology
part_of
part_of
part of
part of
http://www.obofoundry.org/ro/#OBO_REL:part_of
has part
my body has part my brain (continuant parthood, two material entities)
my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)
this year has part this day (occurrent parthood)
a core relation that holds between a whole and its part
Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part.
Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime
Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.)
A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'.
has_part
has part
preceded by
x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
An example is: translation preceded_by transcription; aging preceded_by development (not however death preceded_by aging). Where derives_from links classes of continuants, preceded_by links classes of processes. Clearly, however, these two relations are not independent of each other. Thus if cells of type C1 derive_from cells of type C, then any cell division involving an instance of C1 in a given lineage is preceded_by cellular processes involving an instance of C. The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other.
is preceded by
preceded_by
http://www.obofoundry.org/ro/#OBO_REL:preceded_by
BFO:0000062
unipathway_ontology
preceded_by
preceded_by
preceded by
preceded by
precedes
x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
precedes
occurs in
b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
occurs_in
unfolds in
unfolds_in
Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant
occurs in
site of
[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant
contains process
participates in
this blood clot participates in this blood coagulation
this input material (or this output material) participates in this process
this investigator participates in this investigation
a relation between a continuant and a process, in which the continuant is somehow involved in the process
participates_in
participates in
has participant
this blood coagulation has participant this blood clot
this investigation has participant this investigator
this process has participant this input material (or this output material)
a relation between a process and a continuant, in which the continuant is somehow involved in the process
Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time.
has_participant
http://www.obofoundry.org/ro/#OBO_REL:has_participant
has participant
A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B.
dos
2017-05-24T09:30:46Z
has regulatory component activity
A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.
dos
2017-05-24T09:31:01Z
By convention GO molecular functions are classified by their effector function. Internal regulatory functions are treated as components. For example, NMDA glutmate receptor activity is a cation channel activity with positive regulatory component 'glutamate binding' and negative regulatory components including 'zinc binding' and 'magnesium binding'.
has negative regulatory component activity
A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.
dos
2017-05-24T09:31:17Z
By convention GO molecular functions are classified by their effector function and internal regulatory functions are treated as components. So, for example calmodulin has a protein binding activity that has positive regulatory component activity calcium binding activity. Receptor tyrosine kinase activity is a tyrosine kinase activity that has positive regulatory component 'ligand binding'.
has positive regulatory component activity
dos
2017-05-24T09:44:33Z
A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B.
has component activity
w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.
dos
2017-05-24T09:49:21Z
has component process
A relationship that holds between between a receptor and an chemical entity, typically a small molecule or peptide, that carries information between cells or compartments of a cell and which binds the receptor and regulates its effector function.
dos
2017-07-19T17:30:36Z
has ligand
dos
2017-09-17T13:52:24Z
Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2.
directly regulated by
Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2.
GOC:dos
Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.
dos
2017-09-17T13:52:38Z
directly negatively regulated by
Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.
GOC:dos
Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.
dos
2017-09-17T13:52:47Z
directly positively regulated by
Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.
GOC:dos
A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity.
dos
2017-09-22T14:14:36Z
This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations.
has effector activity
A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity.
GOC:dos
David Osumi-Sutherland
X ends_after Y iff: end(Y) before_or_simultaneous_with end(X)
ends after
David Osumi-Sutherland
starts_at_end_of
X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)
immediately preceded by
David Osumi-Sutherland
ends_at_start_of
meets
X immediately_precedes_Y iff: end(X) simultaneous_with start(Y)
immediately precedes
x overlaps y if and only if there exists some z such that x has part z and z part of y
http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.obolibrary.org/obo/BFO_0000050 some ?Y)
overlaps
true
w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.
The definition of 'has component' is still under discussion. The challenge is in providing a definition that does not imply transitivity.
For use in recording has_part with a cardinality constraint, because OWL does not permit cardinality constraints to be used in combination with transitive object properties. In situations where you would want to say something like 'has part exactly 5 digit, you would instead use has_component exactly 5 digit.
has component
process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2.
We use 'regulates' here to specifically imply control. However, many colloquial usages of the term correctly correspond to the weaker relation of 'causally upstream of or within' (aka influences). Consider relabeling to make things more explicit
Chris Mungall
David Hill
Tanya Berardini
GO
Regulation precludes parthood; the regulatory process may not be within the regulated process.
regulates (processual)
false
regulates
Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2.
Chris Mungall
negatively regulates (process to process)
negatively regulates
Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2.
Chris Mungall
positively regulates (process to process)
positively regulates
mechanosensory neuron capable of detection of mechanical stimulus involved in sensory perception (GO:0050974)
osteoclast SubClassOf 'capable of' some 'bone resorption'
A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process.
Chris Mungall
has function realized in
For compatibility with BFO, this relation has a shortcut definition in which the expression "capable of some P" expands to "bearer_of (some realized_by only P)".
RO_0000053 some (RO_0000054 only ?Y)
capable of
c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.
Chris Mungall
has function in
RO_0000053 some (RO_0000054 only (BFO_0000050 some ?Y))
capable of part of
true
x actively participates in y if and only if x participates in y and x realizes some active role
Chris Mungall
agent in
actively participates in
'heart development' has active participant some Shh protein
x has participant y if and only if x realizes some active role that inheres in y
This may be obsoleted and replaced by the original 'has agent' relation
Chris Mungall
has agent
has active participant
Chris Mungall
Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends.
https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1
A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations.
temporally related to
p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p.
Chris Mungall
consumes
RO:0002233
unipathway_ontology
has_input_compound
has_input_compound
has input
has input
p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.
Chris Mungall
produces
RO:0002234
unipathway_ontology
has_output_compound
has_output_compound
has output
has output
A faulty traffic light (material entity) whose malfunctioning (a process) is causally upstream of a traffic collision (a process): the traffic light acts upstream of the collision.
c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes.
acts upstream of
A gene product that has some activity, where that activity may be a part of a pathway or upstream of the pathway.
c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.
affects
acts upstream of or within
cjm
holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y
causally upstream of, positive effect
cjm
holds between x and y if and only if x is causally upstream of y and the progression of x decreases the frequency, rate or extent of y
causally upstream of, negative effect
A mereological relationship or a topological relationship
Chris Mungall
Do not use this relation directly. It is ended as a grouping for a diverse set of relations, all involving parthood or connectivity relationships
mereotopologically related to
a particular instances of akt-2 enables some instance of protein kinase activity
Chris Mungall
catalyzes
executes
has
is catalyzing
is executing
This relation differs from the parent relation 'capable of' in that the parent is weaker and only expresses a capability that may not be actually realized, whereas this relation is always realized.
This relation is currently used experimentally by the Gene Ontology Consortium. It may not be stable and may be obsoleted at some future time.
enables
A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities.
Chris Mungall
This is a grouping relation that collects relations used for the purpose of connecting structure and function
functionally related to
this relation holds between c and p when c is part of some c', and c' is capable of p.
Chris Mungall
false
part of structure that is capable of
true
c involved_in p if and only if c enables some process p', and p' is part of p
Chris Mungall
actively involved in
enables part of
involved in
inverse of enables
Chris Mungall
enabled by
inverse of regulates
Chris Mungall
regulated by (processual)
regulated by
inverse of negatively regulates
Chris Mungall
negatively regulated by
inverse of positively regulates
Chris Mungall
positively regulated by
inverse of has input
Chris Mungall
input of
inverse of has output
Chris Mungall
output of
inverse of upstream of
Chris Mungall
causally downstream of
Chris Mungall
immediately causally downstream of
This relation groups causal relations between material entities and causal relations between processes
This branch of the ontology deals with causal relations between entities. It is divided into two branches: causal relations between occurrents/processes, and causal relations between material entities. We take an 'activity flow-centric approach', with the former as primary, and define causal relations between material entities in terms of causal relations between occurrents.
To define causal relations in an activity-flow type network, we make use of 3 primitives:
* Temporal: how do the intervals of the two occurrents relate?
* Is the causal relation regulatory?
* Is the influence positive or negative
The first of these can be formalized in terms of the Allen Interval Algebra. Informally, the 3 bins we care about are 'direct', 'indirect' or overlapping. Note that all causal relations should be classified under a RO temporal relation (see the branch under 'temporally related to'). Note that all causal relations are temporal, but not all temporal relations are causal. Two occurrents can be related in time without being causally connected. We take causal influence to be primitive, elucidated as being such that has the upstream changed, some qualities of the donwstream would necessarily be modified.
For the second, we consider a relationship to be regulatory if the system in which the activities occur is capable of altering the relationship to achieve some objective. This could include changing the rate of production of a molecule.
For the third, we consider the effect of the upstream process on the output(s) of the downstream process. If the level of output is increased, or the rate of production of the output is increased, then the direction is increased. Direction can be positive, negative or neutral or capable of either direction. Two positives in succession yield a positive, two negatives in succession yield a positive, otherwise the default assumption is that the net effect is canceled and the influence is neutral.
Each of these 3 primitives can be composed to yield a cross-product of different relation types.
Chris Mungall
Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect.
causally related to
p is causally upstream of q if and only if p precedes q and p and q are linked in a causal chain
Chris Mungall
causally upstream of
p is immediately causally upstream of q iff both (a) p immediately precedes q and (b) p is causally upstream of q. In addition, the output of p must be an input of q.
Chris Mungall
immediately causally upstream of
p 'causally upstream or within' q iff (1) the end of p is before the end of q and (2) the execution of p exerts some causal influence over the outputs of q; i.e. if p was abolished or the outputs of p were to be modified, this would necessarily affect q.
We would like to make this disjoint with 'preceded by', but this is prohibited in OWL2
Chris Mungall
influences (processual)
affects
causally upstream of or within
inverse of causally upstream of or within
Chris Mungall
causally downstream of or within
c involved in regulation of p if c is involved in some p' and p' regulates some p
Chris Mungall
involved in regulation of
c involved in regulation of p if c is involved in some p' and p' positively regulates some p
Chris Mungall
involved in positive regulation of
c involved in regulation of p if c is involved in some p' and p' negatively regulates some p
Chris Mungall
involved in negative regulation of
c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p
OWL does not allow defining object properties via a Union
Chris Mungall
involved in or reguates
involved in or involved in regulation of
A protein that enables activity in a cytosol.
c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.
Chris Mungall
executes activity in
enables activity in
is active in
true
c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.
GOC:cjm
GOC:dos
A relationship that holds between two entities in which the processes executed by the two entities are causally connected.
This relation and all sub-relations can be applied to either (1) pairs of entities that are interacting at any moment of time (2) populations or species of entity whose members have the disposition to interact (3) classes whose members have the disposition to interact.
Considering relabeling as 'pairwise interacts with'
Chris Mungall
Note that this relationship type, and sub-relationship types may be redundant with process terms from other ontologies. For example, the symbiotic relationship hierarchy parallels GO. The relations are provided as a convenient shortcut. Consider using the more expressive processual form to capture your data. In the future, these relations will be linked to their cognate processes through rules.
in pairwise interaction with
interacts with
http://purl.obolibrary.org/obo/MI_0914
https://github.com/oborel/obo-relations/wiki/InteractionRelations
An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other.
Chris Mungall
binds
molecularly binds with
molecularly interacts with
http://purl.obolibrary.org/obo/MI_0915
Axiomatization to GO to be added later
Chris Mungall
An interaction relation between x and y in which x catalyzes a reaction in which a phosphate group is added to y.
phosphorylates
Holds between molecular entities A and B where A can physically interact with B and in doing so regulates a process that B is capable of. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B.
Chris Mungall
molecularly controls
activity directly regulates activity of
Holds between molecular entities A and B where A can physically interact with B and in doing so negatively regulates a process that B is capable of. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B.
Chris Mungall
inhibits
molecularly decreases activity of
activity directly negatively regulates activity of
Holds between molecular entities A and B where A can physically interact with B and in doing so positively regulates a process that B is capable of. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B.
Chris Mungall
activates
molecularly increases activity of
activity directly positively regulates activity of
Chris Mungall
This property or its subproperties is not to be used directly. These properties exist as helper properties that are used to support OWL reasoning.
helper property (not for use in curation)
p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c.
Chris Mungall
has part that occurs in
true
Chris Mungall
is kinase activity
A relationship between a material entity and a process where the material entity has some causal role that influences the process
causal agent in process
p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one of direct activation or direct inhibition. p may be upstream, downstream, part of or a container of q.
Chris Mungall
Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect.
causal relation between processes
The intent is that the process branch of the causal property hierarchy is primary (causal relations hold between occurrents/processes), and that the material branch is defined in terms of the process branch
Chris Mungall
Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect.
causal relation between material entities
Chris Mungall
causally influenced by (material entity to material entity)
causally influenced by
Chris Mungall
interaction relation helper property
https://github.com/oborel/obo-relations/wiki/InteractionRelations
Chris Mungall
molecular interaction relation helper property
Holds between materal entities a and b if the activity of a is causally upstream of the activity of b, or causally upstream of a an activity that modifies b
Chris Mungall
causally influences (material entity to material entity)
causally influences
Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2.
Chris Mungall
directly regulates (processual)
directly regulates
gland SubClassOf 'has part structure that is capable of' some 'secretion by cell'
s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p
Chris Mungall
has part structure that is capable of
A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.
Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect.
Chris Mungall
causal relation between material entity and a process
pyrethroid -> growth
Holds between c and p if and only if c is capable of some activity a, and a regulates p.
capable of regulating
Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p.
capable of negatively regulating
renin -> arteriolar smooth muscle contraction
Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.
capable of positively regulating
Inverse of 'causal agent in process'
process has causal agent
Process(P1) directly postively regulates process(P2) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P1 directly positively regulates P2.
directly positively regulates (process to process)
directly positively regulates
Process(P1) directly negatively regulates process(P2) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P1 directly negatively regulates P2.
directly negatively regulates (process to process)
directly negatively regulates
a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.
Melissa Haendel
Note that this definition doesn't quite distinguish the output of a transformation process from a production process, which is related to the identity/granularity issue.
produces
a produced_by b iff some process that occurs_in b has_output a.
Melissa Haendel
produced by
Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P.
cjm
2018-01-25T23:20:13Z
enables subfunction
cjm
2018-01-26T23:49:30Z
acts upstream of or within, positive effect
cjm
2018-01-26T23:49:51Z
acts upstream of or within, negative effect
c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive
cjm
2018-01-26T23:53:14Z
acts upstream of, positive effect
c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative
cjm
2018-01-26T23:53:22Z
acts upstream of, negative effect
cjm
2018-03-13T23:55:05Z
causally upstream of or within, negative effect
cjm
2018-03-13T23:55:19Z
causally upstream of or within, positive effect
unipathway_ontology
has_connecting_compound
has connecting compound
An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts.
continuant
An entity that has temporal parts and that happens, unfolds or develops through time.
occurrent
A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything.
independent continuant
An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.
process
An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.
material entity
molecular process
molecular_function
catalytic activity
biological_process
true
kinase activity
transferase activity
transferase activity, transferring phosphorus-containing groups
A chemical reaction involved in a UniPathway pathway.
GO:0003824
reaction
UPa:UCR00000
reaction
1
1
1
1
KEGG:R00005
METACYC:ALLOPHANATE-HYDROLASE-RXN
RHEA:19032
reaction
UPa:UCR00005
H(2)O + urea-1-carboxylate = 2 CO(2) + 2 NH(3)
1
LR
1
KEGG:R00005
KEGG reaction
METACYC:ALLOPHANATE-HYDROLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19032
Rhea reaction
1
1
1
KEGG:R00010
METACYC:TREHALA-RXN
RHEA:20871
RHEA:32678
reaction
UPa:UCR00010
H(2)O + alpha,alpha-trehalose = 2 D-glucose
1
LR
1
KEGG:R00010
KEGG reaction
METACYC:TREHALA-RXN
MetaCyc
MetaCyc REACTION
RHEA:20871
Rhea reaction
RHEA:32678
Rhea reaction
1
1
1
KEGG:R00013
METACYC:GLYOCARBOLIG-RXN
RHEA:10139
reaction
UPa:UCR00013
2 glyoxylate = 2-hydroxy-3-oxopropanoate + CO(2)
1
LR
1
KEGG:R00013
KEGG reaction
METACYC:GLYOCARBOLIG-RXN
MetaCyc
MetaCyc REACTION
RHEA:10139
Rhea reaction
1
1
1
1
KEGG:R00014
METACYC:RXN-12583
reaction
UPa:UCR00014
pyruvate + thiamine diphosphate = 2-hydroxyethyl-ThPP + CO(2)
1
LR
1
KEGG:R00014
KEGG reaction
METACYC:RXN-12583
MetaCyc
MetaCyc REACTION
1
1
1
1
1
1
KEGG:R00021
METACYC:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN
RHEA:12131
reaction
UPa:UCR00021
2 L-glutamate + 2 oxidized ferredoxin = 2-oxoglutarate + 2 H(+) + L-glutamine + 2 reduced ferredoxin
1
RL
1
KEGG:R00021
KEGG reaction
METACYC:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:12131
Rhea reaction
1
1
1
KEGG:R00036
METACYC:PORPHOBILSYNTH-RXN
RHEA:24067
reaction
UPa:UCR00036
2 5-aminolevulinate = 2 H(2)O + porphobilinogen
1
LR
1
KEGG:R00036
KEGG reaction
METACYC:PORPHOBILSYNTH-RXN
Rhea
MetaCyc REACTION
RHEA:24067
Rhea reaction
1
1
1
KEGG:R00066
METACYC:RIBOFLAVIN-SYN-RXN
RHEA:20775
reaction
UPa:UCR00066
2 6,7-dimethyl-8-(1-D-ribityl)lumazine = 5-amino-6-(D-ribitylamino)uracil + riboflavin
1
LR
1
KEGG:R00066
KEGG reaction
METACYC:RIBOFLAVIN-SYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:20775
Rhea reaction
1
1
1
1
KEGG:R00084
METACYC:OHMETHYLBILANESYN-RXN
RHEA:13188
reaction
UPa:UCR00084
H(2)O + 4 porphobilinogen = 4 NH(3) + hydroxymethylbilane
1
LR
1
KEGG:R00084
KEGG reaction
METACYC:OHMETHYLBILANESYN-RXN
Rhea
MetaCyc REACTION
RHEA:13188
Rhea reaction
1
1
1
1
1
1
KEGG:R00093
METACYC:GLUTAMATE-SYNTHASE-NADH-RXN
RHEA:13756
reaction
UPa:UCR00093
2 L-glutamate + NAD(+) = 2-oxoglutarate + H(+) + L-glutamine + NADH
1
RL
1
KEGG:R00093
KEGG reaction
METACYC:GLUTAMATE-SYNTHASE-NADH-RXN
MetaCyc
MetaCyc REACTION
RHEA:13756
Rhea reaction
1
1
1
1
1
1
KEGG:R00114
METACYC:GLUTAMATESYN-RXN
RHEA:15504
reaction
UPa:UCR00114
2 L-glutamate + NADP(+) = 2-oxoglutarate + H(+) + L-glutamine + NADPH
1
RL
1
KEGG:R00114
KEGG reaction
METACYC:GLUTAMATESYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:15504
Rhea reaction
1
1
1
KEGG:R00127
METACYC:ADENYL-KIN-RXN
RHEA:12976
reaction
UPa:UCR00127
AMP + ATP = 2 ADP
1
RL
1
KEGG:R00127
KEGG reaction
METACYC:ADENYL-KIN-RXN
Rhea
MetaCyc REACTION
RHEA:12976
Rhea reaction
1
1
1
1
KEGG:R00130
METACYC:DEPHOSPHOCOAKIN-RXN
RHEA:18248
reaction
UPa:UCR00130
3'-dephospho-CoA + ATP = ADP + CoA
1
LR
1
KEGG:R00130
KEGG reaction
METACYC:DEPHOSPHOCOAKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:18248
Rhea reaction
1
1
1
1
KEGG:R00131
METACYC:UREASE-RXN
RHEA:20560
reaction
UPa:UCR00131
H(2)O + urea = CO(2) + 2 NH(3)
1
LR
1
KEGG:R00131
KEGG reaction
METACYC:UREASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20560
Rhea reaction
1
1
1
1
KEGG:R00137
METACYC:2.7.7.1-RXN
RHEA:21363
reaction
UPa:UCR00137
ATP + nicotinamide D-ribonucleotide = NAD(+) + diphosphate
1
LR
1
KEGG:R00137
KEGG reaction
METACYC:2.7.7.1-RXN
MetaCyc
MetaCyc REACTION
RHEA:21363
Rhea reaction
1
1
1
1
1
KEGG:R00150
METACYC:CARBAMATE-KINASE-RXN
RHEA:10155
reaction
UPa:UCR00150
ATP + CO(2) + NH(3) = ADP + carbamoyl phosphate
1
RL
1
KEGG:R00150
KEGG reaction
METACYC:CARBAMATE-KINASE-RXN
Rhea
MetaCyc REACTION
RHEA:10155
Rhea reaction
1
1
1
1
KEGG:R00156
METACYC:UDPKIN-RXN
RHEA:25101
reaction
UPa:UCR00156
ATP + UDP = ADP + UTP
1
LR
1
KEGG:R00156
KEGG reaction
METACYC:UDPKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:25101
Rhea reaction
1
1
1
1
KEGG:R00158
METACYC:RXN-12002
RHEA:24403
reaction
UPa:UCR00158
ATP + UMP = ADP + UDP
1
1
LR
1
LR
1
KEGG:R00158
KEGG reaction
METACYC:RXN-12002
MetaCyc
MetaCyc REACTION
RHEA:24403
Rhea reaction
1
1
1
1
KEGG:R00161
METACYC:FADSYN-RXN
RHEA:17240
reaction
UPa:UCR00161
ATP + FMN = FAD + diphosphate
1
LR
1
KEGG:R00161
KEGG reaction
METACYC:FADSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:17240
Rhea reaction
1
1
1
1
KEGG:R00173
METACYC:3.1.3.74-RXN
RHEA:20536
reaction
UPa:UCR00173
H(2)O + pyridoxal 5'-phosphate = phosphate + pyridoxal
1
LR
1
KEGG:R00173
KEGG reaction
METACYC:3.1.3.74-RXN
MetaCyc
MetaCyc REACTION
RHEA:20536
Rhea reaction
1
1
1
1
KEGG:R00174
METACYC:PYRIDOXKIN-RXN
RHEA:10227
reaction
UPa:UCR00174
ATP + pyridoxal = ADP + pyridoxal 5'-phosphate
1
LR
1
KEGG:R00174
KEGG reaction
METACYC:PYRIDOXKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:10227
Rhea reaction
1
1
1
1
1
1
KEGG:R00177
METACYC:S-ADENMETSYN-RXN
RHEA:21083
reaction
UPa:UCR00177
S-adenosyl-L-methionine + diphosphate + phosphate = ATP + H(2)O + L-methionine
1
RL
1
KEGG:R00177
KEGG reaction
METACYC:S-ADENMETSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:21083
Rhea reaction
1
1
1
1
KEGG:R00178
METACYC:SAMDECARB-RXN
RHEA:15984
reaction
UPa:UCR00178
H(+) + S-adenosyl-L-methionine = CO(2) + S-adenosylmethioninamine
1
LR
1
KEGG:R00178
KEGG reaction
METACYC:SAMDECARB-RXN
MetaCyc
MetaCyc REACTION
RHEA:15984
Rhea reaction
1
1
1
KEGG:R00179
METACYC:4.4.1.14-RXN
RHEA:21747
reaction
UPa:UCR00179
S-adenosyl-L-methionine = 1-aminocyclopropanecarboxylate + S-methyl-5'-thioadenosine
1
LR
1
KEGG:R00179
KEGG reaction
METACYC:4.4.1.14-RXN
MetaCyc
MetaCyc REACTION
RHEA:21747
Rhea reaction
1
1
1
1
KEGG:R00181
METACYC:AMP-DEAMINASE-RXN
RHEA:14780
reaction
UPa:UCR00181
AMP + H(2)O = IMP + NH(3)
1
LR
1
KEGG:R00181
KEGG reaction
METACYC:AMP-DEAMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14780
Rhea reaction
1
1
1
1
KEGG:R00185
METACYC:ADENOSINE-KINASE-RXN
RHEA:20827
reaction
UPa:UCR00185
ATP + adenosine = ADP + AMP
1
LR
1
KEGG:R00185
KEGG reaction
METACYC:ADENOSINE-KINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20827
Rhea reaction
1
1
1
1
1
1
KEGG:R00189
METACYC:NAD-SYNTH-NH3-RXN
RHEA:21191
reaction
UPa:UCR00189
ATP + NH(3) + deamido-NAD(+) = AMP + NAD(+) + diphosphate
1
LR
1
KEGG:R00189
KEGG reaction
METACYC:NAD-SYNTH-NH3-RXN
MetaCyc
MetaCyc REACTION
RHEA:21191
Rhea reaction
1
1
1
1
KEGG:R00190
METACYC:ADENPRIBOSYLTRAN-RXN
RHEA:16612
reaction
UPa:UCR00190
AMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + adenine
1
RL
1
KEGG:R00190
KEGG reaction
METACYC:ADENPRIBOSYLTRAN-RXN
Rhea
MetaCyc REACTION
RHEA:16612
Rhea reaction
1
1
1
KEGG:R00191
METACYC:RXN0-5038
RHEA:25280
reaction
UPa:UCR00191
3',5'-cyclic AMP + H(2)O = AMP
1
LR
1
KEGG:R00191
KEGG reaction
METACYC:RXN0-5038
MetaCyc
MetaCyc REACTION
RHEA:25280
Rhea reaction
1
1
1
1
KEGG:R00192
METACYC:ADENOSYLHOMOCYSTEINASE-RXN
RHEA:21711
reaction
UPa:UCR00192
H(2)O + S-adenosyl-L-homocysteine = L-homocysteine + adenosine
1
LR
1
KEGG:R00192
KEGG reaction
METACYC:ADENOSYLHOMOCYSTEINASE-RXN
Rhea
MetaCyc REACTION
RHEA:21711
Rhea reaction
1
1
1
1
KEGG:R00200
METACYC:PEPDEPHOS-RXN
RHEA:18160
reaction
UPa:UCR00200
ATP + pyruvate = ADP + phosphoenolpyruvate
1
RL
1
KEGG:R00200
KEGG reaction
METACYC:PEPDEPHOS-RXN
Rhea
MetaCyc REACTION
RHEA:18160
Rhea reaction
1
1
1
1
KEGG:R00212
METACYC:PYRUVFORMLY-RXN
RHEA:11847
reaction
UPa:UCR00212
acetyl-CoA + formate = CoA + pyruvate
1
RL
1
KEGG:R00212
KEGG reaction
METACYC:PYRUVFORMLY-RXN
Rhea
MetaCyc REACTION
RHEA:11847
Rhea reaction
1
1
1
KEGG:R00226
METACYC:ACETOLACTSYN-RXN
RHEA:25252
reaction
UPa:UCR00226
(S)-2-acetolactate + CO(2) = 2 pyruvate
1
RL
1
KEGG:R00226
KEGG reaction
METACYC:ACETOLACTSYN-RXN
Rhea
MetaCyc REACTION
RHEA:25252
Rhea reaction
1
1
1
1
1
1
KEGG:R00228
METACYC:ACETALD-DEHYDROG-RXN
RHEA:23291
reaction
UPa:UCR00228
CoA + NAD(+) + acetaldehyde = H(+) + NADH + acetyl-CoA
1
LR
1
KEGG:R00228
KEGG reaction
METACYC:ACETALD-DEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:23291
Rhea reaction
1
1
1
1
KEGG:R00230
METACYC:PHOSACETYLTRANS-RXN
RHEA:19524
reaction
UPa:UCR00230
acetyl-CoA + phosphate = CoA + acetyl phosphate
1
RL
1
KEGG:R00230
KEGG reaction
METACYC:PHOSACETYLTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:19524
Rhea reaction
1
1
1
KEGG:R00233
METACYC:MALONYL-COA-DECARBOXYLASE-RXN
RHEA:18784
reaction
UPa:UCR00233
malonyl-CoA = CO(2) + acetyl-CoA
1
LR
1
KEGG:R00233
KEGG reaction
METACYC:MALONYL-COA-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:18784
Rhea reaction
1
1
1
KEGG:R00238
METACYC:ACETYL-COA-ACETYLTRANSFER-RXN
RHEA:21039
reaction
UPa:UCR00238
2 acetyl-CoA = CoA + acetoacetyl-CoA
1
LR
1
KEGG:R00238
KEGG reaction
METACYC:ACETYL-COA-ACETYLTRANSFER-RXN
Rhea
MetaCyc REACTION
RHEA:21039
Rhea reaction
1
1
1
1
KEGG:R00239
METACYC:GLUTKIN-RXN
RHEA:14880
reaction
UPa:UCR00239
ATP + L-glutamate = ADP + L-glutamyl 5-phosphate
1
LR
1
KEGG:R00239
KEGG reaction
METACYC:GLUTKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:14880
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00243
METACYC:GLUTAMATE-DEHYDROGENASE-RXN
RHEA:15136
reaction
UPa:UCR00243
H(2)O + L-glutamate + NAD(+) = 2-oxoglutarate + H(+) + NADH + NH(3)
1
LR
1
KEGG:R00243
KEGG reaction
METACYC:GLUTAMATE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:15136
Rhea reaction
1
1
1
1
1
1
KEGG:R00253
METACYC:GLUTAMINESYN-RXN
RHEA:16172
reaction
UPa:UCR00253
ATP + L-glutamate + NH(3) = ADP + L-glutamine + phosphate
1
LR
1
KEGG:R00253
KEGG reaction
METACYC:GLUTAMINESYN-RXN
Rhea
MetaCyc REACTION
RHEA:16172
Rhea reaction
1
1
1
1
KEGG:R00256
METACYC:GLUTAMIN-RXN
RHEA:15892
reaction
UPa:UCR00256
H(2)O + L-glutamine = L-glutamate + NH(3)
1
1
LR
2
LR
2
KEGG:R00256
KEGG reaction
METACYC:GLUTAMIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:15892
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R00257
METACYC:NAD-SYNTH-GLN-RXN
RHEA:24387
reaction
UPa:UCR00257
ATP + H(2)O + L-glutamine + deamido-NAD(+) = AMP + L-glutamate + NAD(+) + diphosphate
1
LR
1
KEGG:R00257
KEGG reaction
METACYC:NAD-SYNTH-GLN-RXN
MetaCyc
MetaCyc REACTION
RHEA:24387
Rhea reaction
1
1
1
1
KEGG:R00258
METACYC:ALANINE-AMINOTRANSFERASE-RXN
RHEA:19456
reaction
UPa:UCR00258
2-oxoglutarate + L-alanine = L-glutamate + pyruvate
1
LR
1
KEGG:R00258
KEGG reaction
METACYC:ALANINE-AMINOTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:19456
Rhea reaction
1
1
1
1
KEGG:R00259
METACYC:N-ACETYLTRANSFER-RXN
RHEA:24295
reaction
UPa:UCR00259
L-glutamate + acetyl-CoA = CoA + N-acetyl-L-glutamate
1
LR
1
KEGG:R00259
KEGG reaction
METACYC:N-ACETYLTRANSFER-RXN
Rhea
MetaCyc REACTION
RHEA:24295
Rhea reaction
1
1
KEGG:R00262
METACYC:METHYLASPARTATE-MUTASE-RXN
RHEA:12860
reaction
UPa:UCR00262
(2S,3S)-3-methyl-L-aspartate = L-glutamate
1
RL
1
KEGG:R00262
KEGG reaction
METACYC:METHYLASPARTATE-MUTASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12860
Rhea reaction
1
1
1
1
1
1
KEGG:R00264
METACYC:25-DIOXOVALERATE-DEHYDROGENASE-RXN
RHEA:11299
reaction
UPa:UCR00264
2,5-dioxopentanoate + H(2)O + NADP(+) = 2-oxoglutarate + H(+) + NADPH
1
LR
1
KEGG:R00264
KEGG reaction
METACYC:25-DIOXOVALERATE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:11299
Rhea reaction
1
1
1
1
1
1
KEGG:R00267
METACYC:ISOCITDEH-RXN
METACYC:RXN-8642
RHEA:19632
reaction
UPa:UCR00267
NADP(+) + isocitrate = 2-oxoglutarate + CO(2) + H(+) + NADPH
1
LR
1
KEGG:R00267
KEGG reaction
METACYC:ISOCITDEH-RXN
MetaCyc
MetaCyc REACTION
METACYC:RXN-8642
MetaCyc
Rhea
MetaCyc REACTION
RHEA:19632
Rhea reaction
1
1
1
1
1
KEGG:R00271
METACYC:HOMOCITRATE-SYNTHASE-RXN
RHEA:12932
reaction
UPa:UCR00271
2-oxoglutarate + H(2)O + acetyl-CoA = (R)-homocitrate + CoA
1
LR
1
KEGG:R00271
KEGG reaction
METACYC:HOMOCITRATE-SYNTHASE-RXN
Rhea
MetaCyc REACTION
RHEA:12932
Rhea reaction
1
1
1
KEGG:R00272
METACYC:RXN-7774
RHEA:10527
reaction
UPa:UCR00272
2-oxoglutarate = CO(2) + succinate semialdehyde
1
LR
1
KEGG:R00272
KEGG reaction
METACYC:RXN-7774
MetaCyc
MetaCyc REACTION
RHEA:10527
Rhea reaction
1
1
1
1
1
1
KEGG:R00277
METACYC:PMPOXI-RXN
RHEA:15820
reaction
UPa:UCR00277
H(2)O + O(2) + pyridoxamine 5'-phosphate = H(2)O(2) + NH(3) + pyridoxal 5'-phosphate
1
LR
1
KEGG:R00277
KEGG reaction
METACYC:PMPOXI-RXN
MetaCyc
MetaCyc REACTION
RHEA:15820
Rhea reaction
1
1
1
1
KEGG:R00278
METACYC:PNPOXI-RXN
RHEA:15152
reaction
UPa:UCR00278
O(2) + pyridoxine 5'-phosphate = H(2)O(2) + pyridoxal 5'-phosphate
1
LR
1
KEGG:R00278
KEGG reaction
METACYC:PNPOXI-RXN
MetaCyc
MetaCyc REACTION
RHEA:15152
Rhea reaction
1
1
1
1
1
1
KEGG:R00286
METACYC:UGD-RXN
RHEA:23599
reaction
UPa:UCR00286
H(2)O + 2 NAD(+) + UDP-alpha-D-glucose = 2 H(+) + 2 NADH + UDP-alpha-D-glucuronate
1
LR
1
KEGG:R00286
KEGG reaction
METACYC:UGD-RXN
MetaCyc
MetaCyc REACTION
RHEA:23599
Rhea reaction
1
1
1
1
1
1
KEGG:R00294
METACYC:NITRIC-OXIDE-REDUCTASE-RXN
RHEA:10991
RHEA:30214
reaction
UPa:UCR00294
2 H(+) + 2 ferrocytochrome c + 2 nitric oxide = H(2)O + 2 ferricytochrome c + nitrous oxide
1
LR
1
KEGG:R00294
KEGG reaction
METACYC:NITRIC-OXIDE-REDUCTASE-RXN
Rhea
MetaCyc REACTION
RHEA:10991
Rhea reaction
RHEA:30214
Rhea reaction
1
1
1
1
KEGG:R00299
METACYC:GLUCOKIN-RXN
RHEA:17828
reaction
UPa:UCR00299
ATP + D-glucose = ADP + D-glucose 6-phosphate
1
LR
1
KEGG:R00299
KEGG reaction
METACYC:GLUCOKIN-RXN
Rhea
MetaCyc REACTION
RHEA:17828
Rhea reaction
1
1
1
1
KEGG:R00310
METACYC:PROTOHEMEFERROCHELAT-RXN
RHEA:22587
reaction
UPa:UCR00310
Fe2+ + protoporphyrin-IX = 2 H(+) + protoheme
1
LR
1
KEGG:R00310
KEGG reaction
METACYC:PROTOHEMEFERROCHELAT-RXN
MetaCyc
MetaCyc REACTION
RHEA:22587
Rhea reaction
1
1
1
1
KEGG:R00315
METACYC:ACETATEKIN-RXN
RHEA:11355
reaction
UPa:UCR00315
ATP + acetate = ADP + acetyl phosphate
1
LR
1
KEGG:R00315
KEGG reaction
METACYC:ACETATEKIN-RXN
Rhea
MetaCyc REACTION
RHEA:11355
Rhea reaction
1
1
1
KEGG:R00325
METACYC:CITRAMALATE-LYASE-RXN
RHEA:15548
reaction
UPa:UCR00325
L-citramalate = acetate + pyruvate
1
LR
1
KEGG:R00325
KEGG reaction
METACYC:CITRAMALATE-LYASE-RXN
Rhea
MetaCyc REACTION
RHEA:15548
Rhea reaction
1
1
1
1
KEGG:R00336
METACYC:PPGPPSYN-RXN
RHEA:14256
reaction
UPa:UCR00336
H(2)O + ppGpp = GDP + diphosphate
1
RL
1
KEGG:R00336
KEGG reaction
METACYC:PPGPPSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:14256
Rhea reaction
1
1
1
1
1
KEGG:R00342
METACYC:MALATE-DEH-RXN
RHEA:21435
reaction
UPa:UCR00342
(S)-malate + NAD(+) = H(+) + NADH + oxaloacetate
1
LR
1
KEGG:R00342
KEGG reaction
METACYC:MALATE-DEH-RXN
Rhea
MetaCyc REACTION
RHEA:21435
Rhea reaction
1
1
1
1
1
KEGG:R00351
METACYC:CITSYN-RXN
RHEA:16848
reaction
UPa:UCR00351
CoA + citrate = H(2)O + acetyl-CoA + oxaloacetate
1
RL
1
KEGG:R00351
KEGG reaction
METACYC:CITSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:16848
Rhea reaction
1
1
1
1
KEGG:R00355
METACYC:ASPAMINOTRANS-RXN
RHEA:21827
reaction
UPa:UCR00355
2-oxoglutarate + L-aspartate = L-glutamate + oxaloacetate
1
RL
1
KEGG:R00355
KEGG reaction
METACYC:ASPAMINOTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:21827
Rhea reaction
1
1
1
1
KEGG:R00361
METACYC:MALATE-DEHYDROGENASE-ACCEPTOR-RXN
RHEA:22559
reaction
UPa:UCR00361
(S)-malate + Quinone = Hydroquinone + oxaloacetate
1
KEGG:R00361
KEGG reaction
METACYC:MALATE-DEHYDROGENASE-ACCEPTOR-RXN
MetaCyc
MetaCyc REACTION
RHEA:22559
Rhea reaction
LR
1
1
1
1
1
KEGG:R00367
METACYC:GLYCINE-N-METHYLTRANSFERASE-RXN
RHEA:19940
reaction
UPa:UCR00367
S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine
1
LR
1
KEGG:R00367
KEGG reaction
METACYC:GLYCINE-N-METHYLTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19940
Rhea reaction
1
1
1
1
KEGG:R00369
METACYC:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
RHEA:24251
reaction
UPa:UCR00369
L-alanine + glyoxylate = glycine + pyruvate
1
LR
1
KEGG:R00369
KEGG reaction
METACYC:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:24251
Rhea reaction
1
1
1
1
KEGG:R00371
METACYC:AKBLIG-RXN
RHEA:20739
reaction
UPa:UCR00371
acetyl-CoA + glycine = CoA + L-2-amino-3-oxobutanoic acid
1
RL
1
KEGG:R00371
KEGG reaction
METACYC:AKBLIG-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:20739
Rhea reaction
1
1
1
1
KEGG:R00372
METACYC:GLYCINE-AMINOTRANSFERASE-RXN
RHEA:14092
reaction
UPa:UCR00372
2-oxoglutarate + glycine = L-glutamate + glyoxylate
1
RL
1
KEGG:R00372
KEGG reaction
METACYC:GLYCINE-AMINOTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14092
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00396
METACYC:ALANINE-DEHYDROGENASE-RXN
RHEA:18408
reaction
UPa:UCR00396
H(2)O + L-alanine + NAD(+) = H(+) + NADH + NH(3) + pyruvate
1
LR
1
KEGG:R00396
KEGG reaction
METACYC:ALANINE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:18408
Rhea reaction
1
1
KEGG:R00401
METACYC:ALARACECAT-RXN
RHEA:20252
reaction
UPa:UCR00401
L-alanine = D-alanine
1
LR
1
KEGG:R00401
KEGG reaction
METACYC:ALARACECAT-RXN
Rhea
MetaCyc REACTION
RHEA:20252
Rhea reaction
1
1
1
1
1
1
KEGG:R00405
METACYC:SUCCCOASYN-RXN
RHEA:17664
reaction
UPa:UCR00405
ATP + CoA + succinate = ADP + phosphate + succinyl-CoA
1
RL
1
KEGG:R00405
KEGG reaction
METACYC:SUCCCOASYN-RXN
Rhea
MetaCyc REACTION
RHEA:17664
Rhea reaction
1
1
1
1
KEGG:R00410
METACYC:RXNI-2
RHEA:25483
reaction
UPa:UCR00410
acetoacetate + succinyl-CoA = acetoacetyl-CoA + succinate
1
1
LR
1
LR
1
KEGG:R00410
KEGG reaction
METACYC:RXNI-2
Rhea
MetaCyc REACTION
RHEA:25483
Rhea reaction
1
1
1
1
KEGG:R00411
METACYC:SUCCGLUDESUCC-RXN
RHEA:15172
reaction
UPa:UCR00411
H(2)O + N(2)-succinyl-L-glutamic acid = L-glutamate + succinate
1
LR
1
KEGG:R00411
KEGG reaction
METACYC:SUCCGLUDESUCC-RXN
Rhea
MetaCyc REACTION
RHEA:15172
Rhea reaction
1
1
1
1
KEGG:R00412
RHEA:16360
reaction
UPa:UCR00412
acceptor + succinate = fumarate + reduced acceptor
1
LR
1
KEGG:R00412
KEGG reaction
RHEA:16360
Rhea reaction
1
1
1
1
KEGG:R00416
METACYC:NAG1P-URIDYLTRANS-RXN
RHEA:13512
reaction
UPa:UCR00416
N-acetyl-alpha-D-glucosamine 1-phosphate + UTP = UDP-N-acetyl-alpha-D-glucosamine + diphosphate
1
LR
1
KEGG:R00416
KEGG reaction
METACYC:NAG1P-URIDYLTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:13512
Rhea reaction
1
1
1
1
1
KEGG:R00425
METACYC:GTP-CYCLOHYDRO-II-RXN
RHEA:23707
reaction
UPa:UCR00425
GTP + 3 H(2)O = 2,5-diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine + diphosphate + formate
1
LR
1
KEGG:R00425
KEGG reaction
METACYC:GTP-CYCLOHYDRO-II-RXN
MetaCyc
MetaCyc REACTION
RHEA:23707
Rhea reaction
1
1
1
KEGG:R00428
reaction
UPa:UCR00428
GTP + H(2)O = formamidopyrimidine nucleoside triphosphate
1
LR
1
KEGG:R00428
KEGG reaction
1
1
1
1
KEGG:R00429
METACYC:GTPPYPHOSKIN-RXN
RHEA:22091
reaction
UPa:UCR00429
ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate
1
LR
1
KEGG:R00429
KEGG reaction
METACYC:GTPPYPHOSKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:22091
Rhea reaction
1
1
1
KEGG:R00451
METACYC:DIAMINOPIMDECARB-RXN
RHEA:15104
reaction
UPa:UCR00451
DL-2,6-diaminopimelate = CO(2) + L-lysine
1
LR
1
KEGG:R00451
KEGG reaction
METACYC:DIAMINOPIMDECARB-RXN
MetaCyc
MetaCyc REACTION
RHEA:15104
Rhea reaction
1
1
1
1
1
KEGG:R00469
METACYC:UREIDOGLYCOLATE-HYDROLASE-RXN
RHEA:19812
reaction
UPa:UCR00469
(S)-ureidoglycolate + H(2)O = CO(2) + 2 NH(3) + glyoxylate
1
LR
1
KEGG:R00469
KEGG reaction
METACYC:UREIDOGLYCOLATE-HYDROLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19812
Rhea reaction
1
1
1
1
1
KEGG:R00472
METACYC:MALSYN-RXN
RHEA:18184
reaction
UPa:UCR00472
(S)-malate + CoA = H(2)O + acetyl-CoA + glyoxylate
1
RL
1
KEGG:R00472
KEGG reaction
METACYC:MALSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:18184
Rhea reaction
1
1
1
1
KEGG:R00475
METACYC:RXN-969
RHEA:25314
reaction
UPa:UCR00475
O(2) + glycolate = H(2)O(2) + glyoxylate
1
LR
1
KEGG:R00475
KEGG reaction
METACYC:RXN-969
MetaCyc
MetaCyc REACTION
RHEA:25314
Rhea reaction
1
1
1
1
KEGG:R00476
METACYC:GLYCOLATEDEHYDRO-RXN
RHEA:21267
reaction
UPa:UCR00476
acceptor + glycolate = glyoxylate + reduced acceptor
1
LR
1
KEGG:R00476
KEGG reaction
METACYC:GLYCOLATEDEHYDRO-RXN
Rhea
MetaCyc REACTION
RHEA:21267
Rhea reaction
1
1
1
KEGG:R00479
METACYC:ISOCIT-CLEAV-RXN
RHEA:13248
reaction
UPa:UCR00479
isocitrate = glyoxylate + succinate
1
LR
1
KEGG:R00479
KEGG reaction
METACYC:ISOCIT-CLEAV-RXN
Rhea
MetaCyc REACTION
RHEA:13248
Rhea reaction
1
1
1
1
KEGG:R00480
METACYC:ASPARTATEKIN-RXN
RHEA:23779
reaction
UPa:UCR00480
ATP + L-aspartate = 4-phospho-L-aspartate + ADP
1
1
1
LR
1
LR
1
LR
1
KEGG:R00480
KEGG reaction
METACYC:ASPARTATEKIN-RXN
Rhea
MetaCyc REACTION
RHEA:23779
Rhea reaction
1
1
1
1
KEGG:R00481
RHEA:25879
reaction
UPa:UCR00481
L-aspartate + O(2) = H(2)O(2) + iminoaspartate
1
LR
1
KEGG:R00481
KEGG reaction
RHEA:25879
Rhea reaction
1
1
1
1
1
1
KEGG:R00483
METACYC:ASNSYNA-RXN
RHEA:11375
reaction
UPa:UCR00483
ATP + L-aspartate + NH(3) = AMP + L-asparagine + diphosphate
1
LR
1
KEGG:R00483
KEGG reaction
METACYC:ASNSYNA-RXN
MetaCyc
MetaCyc REACTION
RHEA:11375
Rhea reaction
1
1
1
KEGG:R00489
METACYC:ASPDECARBOX-RXN
RHEA:19500
reaction
UPa:UCR00489
L-aspartate = CO(2) + beta-alanine
1
LR
1
KEGG:R00489
KEGG reaction
METACYC:ASPDECARBOX-RXN
MetaCyc
MetaCyc REACTION
RHEA:19500
Rhea reaction
1
1
1
1
1
1
KEGG:R00497
METACYC:GLUTATHIONE-SYN-RXN
RHEA:13560
reaction
UPa:UCR00497
ATP + L-gamma-glutamyl-L-cysteine + glycine = ADP + glutathione + phosphate
1
LR
1
KEGG:R00497
KEGG reaction
METACYC:GLUTATHIONE-SYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:13560
Rhea reaction
1
1
1
1
KEGG:R00509
METACYC:ADENYLYLSULFKIN-RXN
RHEA:24155
reaction
UPa:UCR00509
5'-adenylyl sulfate + ATP = 3'-phospho-5'-adenylyl sulfate + ADP
1
LR
1
KEGG:R00509
KEGG reaction
METACYC:ADENYLYLSULFKIN-RXN
Rhea
MetaCyc REACTION
RHEA:24155
Rhea reaction
1
1
1
1
KEGG:R00512
METACYC:RXN-11832
RHEA:11603
reaction
UPa:UCR00512
ATP + CMP = ADP + CDP
1
LR
1
KEGG:R00512
KEGG reaction
METACYC:RXN-11832
Rhea
MetaCyc REACTION
RHEA:11603
Rhea reaction
1
1
1
1
KEGG:R00513
METACYC:CYTIKIN-RXN
RHEA:24677
reaction
UPa:UCR00513
ATP + cytidine = ADP + CMP
1
LR
1
KEGG:R00513
KEGG reaction
METACYC:CYTIKIN-RXN
Rhea
MetaCyc REACTION
RHEA:24677
Rhea reaction
1
1
1
1
KEGG:R00525
METACYC:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN
RHEA:12479
reaction
UPa:UCR00525
H(2)O + N-formyl-L-glutamate = L-glutamate + formate
1
LR
1
KEGG:R00525
KEGG reaction
METACYC:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12479
Rhea reaction
1
1
1
1
KEGG:R00527
METACYC:S-FORMYLGLUTATHIONE-HYDROLASE-RXN
RHEA:14964
reaction
UPa:UCR00527
H(2)O + S-formylglutathione = formate + glutathione
1
LR
1
KEGG:R00527
KEGG reaction
METACYC:S-FORMYLGLUTATHIONE-HYDROLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14964
Rhea reaction
1
1
1
1
KEGG:R00529
METACYC:SULFATE-ADENYLYLTRANS-RXN
RHEA:18136
reaction
UPa:UCR00529
ATP + sulfate = 5'-adenylyl sulfate + diphosphate
1
LR
1
KEGG:R00529
KEGG reaction
METACYC:SULFATE-ADENYLYLTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:18136
Rhea reaction
1
1
1
1
KEGG:R00549
METACYC:RIBOFLAVINKIN-RXN
RHEA:14360
reaction
UPa:UCR00549
ATP + riboflavin = ADP + FMN
1
LR
1
KEGG:R00549
KEGG reaction
METACYC:RIBOFLAVINKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:14360
Rhea reaction
1
1
1
1
KEGG:R00551
METACYC:ARGINASE-RXN
RHEA:20572
reaction
UPa:UCR00551
H(2)O + L-arginine = L-ornithine + urea
1
LR
1
KEGG:R00551
KEGG reaction
METACYC:ARGINASE-RXN
Rhea
MetaCyc REACTION
RHEA:20572
Rhea reaction
1
1
1
1
KEGG:R00552
METACYC:ARGININE-DEIMINASE-RXN
RHEA:19600
reaction
UPa:UCR00552
H(2)O + L-arginine = L-citrulline + NH(3)
1
LR
1
KEGG:R00552
KEGG reaction
METACYC:ARGININE-DEIMINASE-RXN
Rhea
MetaCyc REACTION
RHEA:19600
Rhea reaction
1
1
1
1
KEGG:R00565
METACYC:GLYCINE-AMIDINOTRANSFERASE-RXN
RHEA:13204
reaction
UPa:UCR00565
L-arginine + glycine = L-ornithine + guanidinoacetate
1
LR
1
KEGG:R00565
KEGG reaction
METACYC:GLYCINE-AMIDINOTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13204
Rhea reaction
1
1
1
KEGG:R00566
METACYC:ARGDECARBOX-RXN
RHEA:17644
reaction
UPa:UCR00566
L-arginine = CO(2) + agmatine
1
LR
1
KEGG:R00566
KEGG reaction
METACYC:ARGDECARBOX-RXN
Rhea
MetaCyc REACTION
RHEA:17644
Rhea reaction
1
1
1
1
KEGG:R00570
METACYC:CDPKIN-RXN
RHEA:25240
reaction
UPa:UCR00570
ATP + CDP = ADP + CTP
1
LR
1
KEGG:R00570
KEGG reaction
METACYC:CDPKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:25240
Rhea reaction
1
1
1
1
1
1
KEGG:R00571
RHEA:16600
reaction
UPa:UCR00571
ATP + NH(3) + UTP = ADP + CTP + phosphate
1
LR
1
KEGG:R00571
KEGG reaction
RHEA:16600
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R00575
METACYC:CARBPSYN-RXN
RHEA:18636
reaction
UPa:UCR00575
2 ATP + H(2)O + L-glutamine + bicarbonate = 2 ADP + L-glutamate + carbamoyl phosphate + phosphate
1
1
LR
1
LR
1
KEGG:R00575
KEGG reaction
METACYC:CARBPSYN-RXN
Rhea
MetaCyc REACTION
RHEA:18636
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R00578
METACYC:ASNSYNB-RXN
RHEA:12231
reaction
UPa:UCR00578
ATP + H(2)O + L-aspartate + L-glutamine = AMP + L-asparagine + L-glutamate + diphosphate
1
LR
1
KEGG:R00578
KEGG reaction
METACYC:ASNSYNB-RXN
MetaCyc
MetaCyc REACTION
RHEA:12231
Rhea reaction
1
1
1
1
KEGG:R00582
METACYC:RXN0-5114
RHEA:21211
reaction
UPa:UCR00582
H(2)O + O-phospho-L-serine = L-serine + phosphate
1
LR
1
KEGG:R00582
KEGG reaction
METACYC:RXN0-5114
MetaCyc
MetaCyc REACTION
RHEA:21211
Rhea reaction
1
1
1
1
KEGG:R00585
METACYC:SERINE--PYRUVATE-AMINOTRANSFERASE-RXN
RHEA:22855
reaction
UPa:UCR00585
L-serine + pyruvate = 3-hydroxypyruvate + L-alanine
1
LR
1
KEGG:R00585
KEGG reaction
METACYC:SERINE--PYRUVATE-AMINOTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:22855
Rhea reaction
1
1
1
1
KEGG:R00586
METACYC:SERINE-O-ACETTRAN-RXN
RHEA:24563
reaction
UPa:UCR00586
L-serine + acetyl-CoA = CoA + O-acetyl-L-serine
1
LR
1
KEGG:R00586
KEGG reaction
METACYC:SERINE-O-ACETTRAN-RXN
Rhea
MetaCyc REACTION
RHEA:24563
Rhea reaction
1
1
1
1
1
KEGG:R00605
METACYC:METHANOL-DEHYDROGENASE-RXN
RHEA:19404
reaction
UPa:UCR00605
NAD(+) + methanol = H(+) + NADH + formaldehyde
1
LR
1
KEGG:R00605
KEGG reaction
METACYC:METHANOL-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19404
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00606
METACYC:RXN-2841
RHEA:30210
reaction
UPa:UCR00606
H(2)O + amicyanin + methylamine = 2 H(+) + NH(3) + formaldehyde + reduced amicyanin
1
LR
1
KEGG:R00606
KEGG reaction
METACYC:RXN-2841
MetaCyc
MetaCyc REACTION
RHEA:30210
Rhea reaction
1
1
1
1
1
1
KEGG:R00611
METACYC:SARCOSINE-DEHYDROGENASE-RXN
RHEA:19796
reaction
UPa:UCR00611
H(2)O + electron-transferring flavoprotein + sarcosine = formaldehyde + glycine + reduced electron-transferring flavoprotein
1
LR
1
KEGG:R00611
KEGG reaction
METACYC:SARCOSINE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19796
Rhea reaction
1
1
1
1
KEGG:R00617
METACYC:THI-P-KIN-RXN
RHEA:15916
reaction
UPa:UCR00617
ATP + thiamine phosphate = ADP + thiamine diphosphate
1
LR
1
KEGG:R00617
KEGG reaction
METACYC:THI-P-KIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:15916
Rhea reaction
1
1
1
1
KEGG:R00619
METACYC:THIAMIN-PYROPHOSPHOKINASE-RXN
RHEA:11579
reaction
UPa:UCR00619
ATP + thiamine = AMP + thiamine diphosphate
1
LR
1
KEGG:R00619
KEGG reaction
METACYC:THIAMIN-PYROPHOSPHOKINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:11579
Rhea reaction
1
1
1
1
1
KEGG:R00640
METACYC:GALACTONOLACTONE-DEHYDROGENASE-RXN
RHEA:14760
reaction
UPa:UCR00640
L-Galactono-1,4-lactone + 2 ferricytochrome c = 2 H(+) + L-ascorbate + 2 ferrocytochrome c
1
LR
1
KEGG:R00640
KEGG reaction
METACYC:GALACTONOLACTONE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14760
Rhea reaction
1
1
KEGG:R00647
METACYC:RXN-8784
RHEA:15272
reaction
UPa:UCR00647
L-ascorbate = L-xylo-hexulonolactone
1
RL
2
KEGG:R00647
KEGG reaction
METACYC:RXN-8784
MetaCyc
MetaCyc REACTION
RHEA:15272
Rhea reaction
1
1
1
KEGG:R00658
METACYC:2PGADEHYDRAT-RXN
RHEA:10167
reaction
UPa:UCR00658
2-phospho-D-glycerate = H(2)O + phosphoenolpyruvate
1
LR
1
KEGG:R00658
KEGG reaction
METACYC:2PGADEHYDRAT-RXN
Rhea
MetaCyc REACTION
RHEA:10167
Rhea reaction
1
1
1
1
KEGG:R00667
METACYC:ORNITHINE-GLU-AMINOTRANSFORASE-RXN
RHEA:25163
reaction
UPa:UCR00667
2-oxoglutarate + L-ornithine = L-glutamate + L-glutamate 5-semialdehyde
1
LR
1
KEGG:R00667
KEGG reaction
METACYC:ORNITHINE-GLU-AMINOTRANSFORASE-RXN
Rhea
MetaCyc REACTION
RHEA:25163
Rhea reaction
1
1
1
1
KEGG:R00669
METACYC:ACETYLORNDEACET-RXN
RHEA:15944
reaction
UPa:UCR00669
H(2)O + N(2)-acetyl-L-ornithine = L-ornithine + acetate
1
LR
1
KEGG:R00669
KEGG reaction
METACYC:ACETYLORNDEACET-RXN
Rhea
MetaCyc REACTION
RHEA:15944
Rhea reaction
1
1
1
KEGG:R00670
METACYC:ORNDECARBOX-RXN
RHEA:22967
reaction
UPa:UCR00670
L-ornithine = CO(2) + putrescine
1
LR
1
KEGG:R00670
KEGG reaction
METACYC:ORNDECARBOX-RXN
MetaCyc
MetaCyc REACTION
RHEA:22967
Rhea reaction
1
1
1
KEGG:R00671
METACYC:ORNITHINE-CYCLODEAMINASE-RXN
RHEA:24371
reaction
UPa:UCR00671
L-ornithine = L-proline + NH(3)
1
LR
1
KEGG:R00671
KEGG reaction
METACYC:ORNITHINE-CYCLODEAMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:24371
Rhea reaction
1
1
1
1
1
KEGG:R00673
METACYC:TRYPTOPHAN-RXN
RHEA:19556
reaction
UPa:UCR00673
H(2)O + L-tryptophan = NH(3) + indole + pyruvate
1
LR
1
KEGG:R00673
KEGG reaction
METACYC:TRYPTOPHAN-RXN
Rhea
MetaCyc REACTION
RHEA:19556
Rhea reaction
1
1
1
1
KEGG:R00674
METACYC:RXN0-2382
RHEA:26437
reaction
UPa:UCR00674
L-serine + indole = H(2)O + L-tryptophan
1
LR
2
KEGG:R00674
KEGG reaction
METACYC:RXN0-2382
MetaCyc
MetaCyc REACTION
RHEA:26437
Rhea reaction
1
1
1
KEGG:R00678
METACYC:RXN-8665
RHEA:24539
reaction
UPa:UCR00678
L-tryptophan + O(2) = N-formyl-N-kynurenine
1
LR
1
KEGG:R00678
KEGG reaction
METACYC:RXN-8665
MetaCyc
MetaCyc REACTION
RHEA:24539
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00688
METACYC:PHENYLALANINE-DEHYDROGENASE-RXN
RHEA:21411
reaction
UPa:UCR00688
H(2)O + L-phenylalanine + NAD(+) = H(+) + NADH + NH(3) + phenylpyruvate
1
RL
1
KEGG:R00688
KEGG reaction
METACYC:PHENYLALANINE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:21411
Rhea reaction
1
1
1
1
KEGG:R00691
METACYC:CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN
RHEA:12539
reaction
UPa:UCR00691
L-arogenate = CO(2) + H(2)O + L-phenylalanine
1
LR
1
KEGG:R00691
KEGG reaction
METACYC:CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12539
Rhea reaction
1
1
1
1
KEGG:R00694
METACYC:PHEAMINOTRANS-RXN
RHEA:25155
reaction
UPa:UCR00694
2-oxoglutarate + L-phenylalanine = L-glutamate + phenylpyruvate
1
RL
1
KEGG:R00694
KEGG reaction
METACYC:PHEAMINOTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:25155
Rhea reaction
1
1
1
KEGG:R00697
METACYC:PHENYLALANINE-AMMONIA-LYASE-RXN
RHEA:21387
reaction
UPa:UCR00697
L-phenylalanine = NH(3) + trans-cinnamate
1
LR
1
KEGG:R00697
KEGG reaction
METACYC:PHENYLALANINE-AMMONIA-LYASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:21387
Rhea reaction
1
1
1
KEGG:R00699
METACYC:PHENYLALANINE-DECARBOXYLASE-RXN
RHEA:19720
reaction
UPa:UCR00699
L-phenylalanine = 2-phenylethylamine + CO(2)
1
LR
1
KEGG:R00699
KEGG reaction
METACYC:PHENYLALANINE-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19720
Rhea reaction
1
1
1
1
1
KEGG:R00703
METACYC:L-LACTATE-DEHYDROGENASE-RXN
RHEA:23447
reaction
UPa:UCR00703
(S)-lactate + NAD(+) = H(+) + NADH + pyruvate
1
RL
1
KEGG:R00703
KEGG reaction
METACYC:L-LACTATE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:23447
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00705
METACYC:RXN-2902
RHEA:22995
reaction
UPa:UCR00705
3-oxopropanoate + CoA + NAD(+) = CO(2) + H(+) + NADH + acetyl-CoA
1
LR
1
KEGG:R00705
KEGG reaction
METACYC:RXN-2902
MetaCyc
MetaCyc REACTION
RHEA:22995
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00706
METACYC:1.2.1.18-RXN
RHEA:22991
reaction
UPa:UCR00706
3-oxopropanoate + CoA + NADP(+) = CO(2) + H(+) + NADPH + acetyl-CoA
1
LR
1
KEGG:R00706
KEGG reaction
METACYC:1.2.1.18-RXN
Rhea
MetaCyc REACTION
RHEA:22991
Rhea reaction
1
1
1
1
1
1
KEGG:R00707
METACYC:PYRROLINECARBDEHYDROG-RXN
METACYC:RXN-11632
RHEA:16420
RHEA:24893
reaction
UPa:UCR00707
(S)-1-pyrroline-5-carboxylic acid + 2 H(2)O + NAD(+) = H(+) + L-glutamate + NADH
1
LR
1
KEGG:R00707
KEGG reaction
METACYC:PYRROLINECARBDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
METACYC:RXN-11632
MetaCyc
Rhea
MetaCyc REACTION
RHEA:16420
Rhea reaction
RHEA:24893
Rhea reaction
1
1
1
1
1
1
KEGG:R00709
METACYC:ISOCITRATE-DEHYDROGENASE-NAD+-RXN
METACYC:RXN-7969
RHEA:23635
reaction
UPa:UCR00709
NAD(+) + isocitrate = 2-oxoglutarate + CO(2) + H(+) + NADH
1
LR
1
KEGG:R00709
KEGG reaction
METACYC:ISOCITRATE-DEHYDROGENASE-NAD+-RXN
MetaCyc
MetaCyc REACTION
METACYC:RXN-7969
MetaCyc
Rhea
MetaCyc REACTION
RHEA:23635
Rhea reaction
1
1
1
1
1
1
KEGG:R00710
METACYC:RXN66-3
RHEA:25297
reaction
UPa:UCR00710
H(2)O + NAD(+) + acetaldehyde = H(+) + NADH + acetate
1
LR
1
KEGG:R00710
KEGG reaction
METACYC:RXN66-3
MetaCyc
MetaCyc REACTION
RHEA:25297
Rhea reaction
1
1
1
1
1
1
KEGG:R00713
METACYC:SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
RHEA:13220
reaction
UPa:UCR00713
H(2)O + NAD(+) + succinate semialdehyde = H(+) + NADH + succinate
1
LR
1
KEGG:R00713
KEGG reaction
METACYC:SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13220
Rhea reaction
1
1
1
1
1
1
KEGG:R00714
METACYC:SUCCSEMIALDDEHYDROG-RXN
RHEA:13216
reaction
UPa:UCR00714
H(2)O + NADP(+) + succinate semialdehyde = H(+) + NADPH + succinate
1
LR
1
KEGG:R00714
KEGG reaction
METACYC:SUCCSEMIALDDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:13216
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00715
METACYC:1.5.1.7-RXN
RHEA:12443
reaction
UPa:UCR00715
H(2)O + NAD(+) + saccharopine = 2-oxoglutarate + H(+) + L-lysine + NADH
1
LR
1
KEGG:R00715
KEGG reaction
METACYC:1.5.1.7-RXN
MetaCyc
MetaCyc REACTION
RHEA:12443
Rhea reaction
1
1
1
1
1
1
1
KEGG:R00716
METACYC:1.5.1.8-RXN
RHEA:19376
reaction
UPa:UCR00716
H(2)O + NADP(+) + saccharopine = 2-oxoglutarate + H(+) + L-lysine + NADPH
1
RL
1
KEGG:R00716
KEGG reaction
METACYC:1.5.1.8-RXN
MetaCyc
MetaCyc REACTION
RHEA:19376
Rhea reaction
1
1
1
1
KEGG:R00731
RHEA:34286
reaction
UPa:UCR00731
L-tyrosine + O(2) = H(2)O + L-dopa
1
LR
1
KEGG:R00731
KEGG reaction
RHEA:34286
Rhea reaction
1
1
1
1
1
1
KEGG:R00732
METACYC:CYCLOHEXADIENYL-DEHYDROGENASE-RXN
RHEA:12259
reaction
UPa:UCR00732
L-arogenate + NAD(+) = CO(2) + H(+) + L-tyrosine + NADH
1
LR
1
KEGG:R00732
KEGG reaction
METACYC:CYCLOHEXADIENYL-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12259
Rhea reaction
1
1
1
1
1
1
KEGG:R00733
METACYC:RXN-5682
RHEA:15420
reaction
UPa:UCR00733
L-arogenate + NADP(+) = CO(2) + H(+) + L-tyrosine + NADPH
1
LR
1
KEGG:R00733
KEGG reaction
METACYC:RXN-5682
MetaCyc
MetaCyc REACTION
RHEA:15420
Rhea reaction
1
1
1
1
KEGG:R00734
METACYC:TYROSINE-AMINOTRANSFERASE-RXN
RHEA:15096
reaction
UPa:UCR00734
2-oxoglutarate + L-tyrosine = (4-hydroxyphenyl)pyruvate + L-glutamate
1
1
LR
1
RL
1
KEGG:R00734
KEGG reaction
METACYC:TYROSINE-AMINOTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:15096
Rhea reaction
1
1
1
1
1
1
KEGG:R00742
METACYC:ACETYL-COA-CARBOXYLTRANSFER-RXN
RHEA:11311
reaction
UPa:UCR00742
ATP + acetyl-CoA + bicarbonate = ADP + malonyl-CoA + phosphate
1
LR
1
KEGG:R00742
KEGG reaction
METACYC:ACETYL-COA-CARBOXYLTRANSFER-RXN
MetaCyc
MetaCyc REACTION
RHEA:11311
Rhea reaction
1
1
1
KEGG:R00750
METACYC:MHPELY-RXN
RHEA:22627
reaction
UPa:UCR00750
acetaldehyde + pyruvate = 4-hydroxy-2-oxopentanoate
1
1
RL
1
RL
1
KEGG:R00750
KEGG reaction
METACYC:MHPELY-RXN
Rhea
MetaCyc REACTION
RHEA:22627
Rhea reaction
1
1
1
KEGG:R00751
METACYC:THREONINE-ALDOLASE-RXN
RHEA:19628
reaction
UPa:UCR00751
L-threonine = acetaldehyde + glycine
1
LR
1
KEGG:R00751
KEGG reaction
METACYC:THREONINE-ALDOLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19628
Rhea reaction
1
1
1
1
1
KEGG:R00754
METACYC:ALCOHOL-DEHYDROG-RXN
RHEA:25293
reaction
UPa:UCR00754
NAD(+) + ethanol = H(+) + NADH + acetaldehyde
1
LR
1
KEGG:R00754
KEGG reaction
METACYC:ALCOHOL-DEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:25293
Rhea reaction
1
1
1
1
KEGG:R00756
METACYC:6PFRUCTPHOS-RXN
RHEA:16112
reaction
UPa:UCR00756
ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate
1
LR
1
KEGG:R00756
KEGG reaction
METACYC:6PFRUCTPHOS-RXN
MetaCyc
MetaCyc REACTION
RHEA:16112
Rhea reaction
1
1
1
1
KEGG:R00765
METACYC:GLUCOSAMINE-6-P-DEAMIN-RXN
RHEA:12175
reaction
UPa:UCR00765
H(2)O + alpha-D-glucosamine 6-phosphate = D-fructose 6-phosphate + NH(3)
1
LR
1
KEGG:R00765
KEGG reaction
METACYC:GLUCOSAMINE-6-P-DEAMIN-RXN
Rhea
MetaCyc REACTION
RHEA:12175
Rhea reaction
1
1
1
1
KEGG:R00766
METACYC:SUCROSE-PHOSPHATE-SYNTHASE-RXN
RHEA:22175
reaction
UPa:UCR00766
D-fructose 6-phosphate + UDP-alpha-D-glucose = UDP + sucrose 6-phosphate
1
LR
1
KEGG:R00766
KEGG reaction
METACYC:SUCROSE-PHOSPHATE-SYNTHASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22175
Rhea reaction
1
1
1
1
KEGG:R00768
METACYC:L-GLN-FRUCT-6-P-AMINOTRANS-RXN
RHEA:13240
reaction
UPa:UCR00768
D-fructose 6-phosphate + L-glutamine = L-glutamate + alpha-D-glucosamine 6-phosphate
1
LR
1
KEGG:R00768
KEGG reaction
METACYC:L-GLN-FRUCT-6-P-AMINOTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:13240
Rhea reaction
1
1
KEGG:R00771
METACYC:PGLUCISOM-RXN
METACYC:RXN-6182
RHEA:11819
reaction
UPa:UCR00771
D-glucose 6-phosphate = D-fructose 6-phosphate
1
LR
1
KEGG:R00771
KEGG reaction
METACYC:PGLUCISOM-RXN
Rhea
MetaCyc REACTION
METACYC:RXN-6182
MetaCyc
Rhea
MetaCyc REACTION
RHEA:11819
Rhea reaction
1
1
KEGG:R00772
METACYC:MANNPISOM-RXN
RHEA:12359
reaction
UPa:UCR00772
D-mannose 6-phosphate = D-fructose 6-phosphate
1
RL
1
KEGG:R00772
KEGG reaction
METACYC:MANNPISOM-RXN
Rhea
MetaCyc REACTION
RHEA:12359
Rhea reaction
1
1
1
1
1
1
KEGG:R00774
METACYC:UREA-CARBOXYLASE-RXN
RHEA:20899
reaction
UPa:UCR00774
ATP + bicarbonate + urea = ADP + phosphate + urea-1-carboxylate
1
LR
1
KEGG:R00774
KEGG reaction
METACYC:UREA-CARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20899
Rhea reaction
1
1
1
1
1
1
KEGG:R00783
METACYC:NITRITE-REDUCTASE-CYTOCHROME-RXN
RHEA:15236
reaction
UPa:UCR00783
H(2)O + ferricytochrome c + nitric oxide = H(+) + ferrocytochrome c + nitrite
1
RL
1
KEGG:R00783
KEGG reaction
METACYC:NITRITE-REDUCTASE-CYTOCHROME-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:15236
Rhea reaction
1
1
1
1
1
KEGG:R00798
METACYC:NITRATREDUCT-RXN
RHEA:21071
reaction
UPa:UCR00798
H(2)O + acceptor + nitrite = nitrate + reduced acceptor
1
RL
1
KEGG:R00798
KEGG reaction
METACYC:NITRATREDUCT-RXN
Rhea
MetaCyc REACTION
RHEA:21071
Rhea reaction
1
1
1
1
KEGG:R00805
METACYC:SUCROSE-PHOSPHATASE-RXN
RHEA:19292
reaction
UPa:UCR00805
H(2)O + sucrose 6-phosphate = phosphate + sucrose
1
LR
1
KEGG:R00805
KEGG reaction
METACYC:SUCROSE-PHOSPHATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19292
Rhea reaction
1
1
1
1
1
KEGG:R00812
METACYC:1.3.1.19-RXN
RHEA:15460
reaction
UPa:UCR00812
NAD(+) + cis-1,2-dihydrobenzene-1,2-diol = H(+) + NADH + catechol
1
LR
1
KEGG:R00812
KEGG reaction
METACYC:1.3.1.19-RXN
MetaCyc
MetaCyc REACTION
RHEA:15460
Rhea reaction
1
1
1
1
1
1
KEGG:R00813
METACYC:1.3.1.25-RXN
RHEA:11563
reaction
UPa:UCR00813
(1R,6S)-1,6-dihydroxycyclohexa-2,4-dienecarboxylic acid + NAD(+) = CO(2) + H(+) + NADH + catechol
1
LR
1
KEGG:R00813
KEGG reaction
METACYC:1.3.1.25-RXN
MetaCyc
MetaCyc REACTION
RHEA:11563
Rhea reaction
1
1
1
KEGG:R00817
METACYC:CATECHOL-12-DIOXYGENASE-RXN
RHEA:23855
reaction
UPa:UCR00817
O(2) + catechol = cis,cis-muconate
1
LR
1
KEGG:R00817
KEGG reaction
METACYC:CATECHOL-12-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23855
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R00823
RHEA:11079
reaction
UPa:UCR00823
H(+) + NADH + O(2) + anthranilate = CO(2) + NAD(+) + NH(3) + catechol
1
LR
1
KEGG:R00823
KEGG reaction
RHEA:11079
Rhea reaction
1
1
1
1
KEGG:R00829
METACYC:RXN-3641
RHEA:19484
reaction
UPa:UCR00829
acetyl-CoA + succinyl-CoA = 3-oxoadipyl-CoA + CoA
1
RL
1
KEGG:R00829
KEGG reaction
METACYC:RXN-3641
MetaCyc
MetaCyc REACTION
RHEA:19484
Rhea reaction
1
1
1
1
1
KEGG:R00830
METACYC:5-AMINOLEVULINIC-ACID-SYNTHASE-RXN
RHEA:12924
reaction
UPa:UCR00830
glycine + succinyl-CoA = 5-aminolevulinate + CO(2) + CoA
1
LR
1
KEGG:R00830
KEGG reaction
METACYC:5-AMINOLEVULINIC-ACID-SYNTHASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12924
Rhea reaction
1
1
1
1
KEGG:R00832
METACYC:ARGININE-N-SUCCINYLTRANSFERASE-RXN
RHEA:15188
reaction
UPa:UCR00832
L-arginine + succinyl-CoA = CoA + N(2)-succinyl-L-arginine
1
LR
1
KEGG:R00832
KEGG reaction
METACYC:ARGININE-N-SUCCINYLTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:15188
Rhea reaction
1
1
KEGG:R00833
METACYC:METHYLMALONYL-COA-MUT-RXN
RHEA:22891
reaction
UPa:UCR00833
(R)-methylmalonyl-CoA = succinyl-CoA
1
LR
1
KEGG:R00833
KEGG reaction
METACYC:METHYLMALONYL-COA-MUT-RXN
Rhea
MetaCyc REACTION
RHEA:22891
Rhea reaction
1
1
1
1
1
KEGG:R00835
METACYC:RXN-14819
RHEA:15844
reaction
UPa:UCR00835
D-glucose 6-phosphate + NADP(+) = D-glucono-1,5-lactone 6-phosphate + H(+) + NADPH
1
LR
1
KEGG:R00835
KEGG reaction
METACYC:RXN-14819
MetaCyc
Rhea
MetaCyc REACTION
RHEA:15844
Rhea reaction
1
1
1
1
KEGG:R00847
METACYC:GLYCEROL-KIN-RXN
RHEA:21647
reaction
UPa:UCR00847
ATP + glycerol = ADP + sn-glycerol 3-phosphate
1
LR
1
KEGG:R00847
KEGG reaction
METACYC:GLYCEROL-KIN-RXN
Rhea
MetaCyc REACTION
RHEA:21647
Rhea reaction
1
1
1
1
KEGG:R00849
RHEA:18980
reaction
UPa:UCR00849
Quinone + sn-glycerol 3-phosphate = Hydroquinone + glycerone phosphate
1
1
LR
1
LR
1
KEGG:R00849
KEGG reaction
RHEA:18980
Rhea reaction
1
1
1
1
KEGG:R00851
METACYC:RXN-1381
RHEA:15328
reaction
UPa:UCR00851
acyl-CoA + sn-glycerol 3-phosphate = 1-acyl-sn-glycerol 3-phosphate + CoA
1
LR
1
KEGG:R00851
KEGG reaction
METACYC:RXN-1381
MetaCyc
MetaCyc REACTION
RHEA:15328
Rhea reaction
1
1
1
1
1
1
KEGG:R00858
METACYC:SULFITE-REDUCT-RXN
RHEA:13804
reaction
UPa:UCR00858
3 H(2)O + 3 NADP(+) + hydrogen sulfide = 3 H(+) + 3 NADPH + sulfite
1
RL
1
KEGG:R00858
KEGG reaction
METACYC:SULFITE-REDUCT-RXN
MetaCyc
MetaCyc REACTION
RHEA:13804
Rhea reaction
1
1
1
1
1
1
KEGG:R00859
METACYC:SULFITE-REDUCTASE-FERREDOXIN-RXN
RHEA:23135
reaction
UPa:UCR00859
3 H(2)O + hydrogen sulfide + 6 oxidized ferredoxin = 6 H(+) + 6 reduced ferredoxin + sulfite
1
RL
1
KEGG:R00859
KEGG reaction
METACYC:SULFITE-REDUCTASE-FERREDOXIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:23135
Rhea reaction
1
1
1
1
KEGG:R00874
METACYC:1.1.99.28-RXN
RHEA:20640
reaction
UPa:UCR00874
D-fructose + D-glucose = D-glucono-1,5-lactone + D-sorbitol
1
LR
1
KEGG:R00874
KEGG reaction
METACYC:1.1.99.28-RXN
MetaCyc
MetaCyc REACTION
RHEA:20640
Rhea reaction
1
1
1
1
KEGG:R00883
METACYC:MANNPGUANYLTRANGDP-RXN
RHEA:12908
reaction
UPa:UCR00883
GDP + alpha-D-mannose 1-phosphate = GDP-alpha-D-mannose + phosphate
1
LR
1
KEGG:R00883
KEGG reaction
METACYC:MANNPGUANYLTRANGDP-RXN
Rhea
MetaCyc REACTION
RHEA:12908
Rhea reaction
1
1
1
1
KEGG:R00885
METACYC:2.7.7.13-RXN
RHEA:15232
reaction
UPa:UCR00885
GTP + alpha-D-mannose 1-phosphate = GDP-alpha-D-mannose + diphosphate
1
LR
1
KEGG:R00885
KEGG reaction
METACYC:2.7.7.13-RXN
MetaCyc
MetaCyc REACTION
RHEA:15232
Rhea reaction
1
1
1
KEGG:R00888
METACYC:GDPMANDEHYDRA-RXN
RHEA:23823
reaction
UPa:UCR00888
GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-D-mannose + H(2)O
1
LR
1
KEGG:R00888
KEGG reaction
METACYC:GDPMANDEHYDRA-RXN
MetaCyc
MetaCyc REACTION
RHEA:23823
Rhea reaction
1
1
1
KEGG:R00893
METACYC:CYSTEINE-DIOXYGENASE-RXN
RHEA:20444
reaction
UPa:UCR00893
L-cysteine + O(2) = 3-sulfino-L-alanine
1
LR
1
KEGG:R00893
KEGG reaction
METACYC:CYSTEINE-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20444
Rhea reaction
1
1
1
1
1
1
KEGG:R00894
METACYC:GLUTCYSLIG-RXN
RHEA:13288
reaction
UPa:UCR00894
ATP + L-cysteine + L-glutamate = ADP + L-gamma-glutamyl-L-cysteine + phosphate
1
LR
1
KEGG:R00894
KEGG reaction
METACYC:GLUTCYSLIG-RXN
MetaCyc
MetaCyc REACTION
RHEA:13288
Rhea reaction
1
1
1
1
KEGG:R00897
METACYC:ACSERLY-RXN
RHEA:14832
reaction
UPa:UCR00897
O-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate
1
LR
1
KEGG:R00897
KEGG reaction
METACYC:ACSERLY-RXN
Rhea
MetaCyc REACTION
RHEA:14832
Rhea reaction
1
1
1
1
KEGG:R00901
METACYC:CYSTEINE-LYASE-RXN
RHEA:20919
reaction
UPa:UCR00901
L-cysteine + sulfite = L-cysteate + hydrogen sulfide
1
LR
1
KEGG:R00901
KEGG reaction
METACYC:CYSTEINE-LYASE-RXN
Rhea
MetaCyc REACTION
RHEA:20919
Rhea reaction
1
1
1
1
KEGG:R00921
METACYC:PTAALT-RXN
RHEA:28049
reaction
UPa:UCR00921
phosphate + propanoyl-CoA = CoA + propanoyl phosphate
1
LR
1
KEGG:R00921
KEGG reaction
METACYC:PTAALT-RXN
MetaCyc
MetaCyc REACTION
RHEA:28049
Rhea reaction
1
1
1
1
1
KEGG:R00939
METACYC:DIHYDROFOLATEREDUCT-RXN
RHEA:15012
reaction
UPa:UCR00939
5,6,7,8-tetrahydrofolate + NADP(+) = 7,8-dihydrofolate + H(+) + NADPH
1
RL
1
KEGG:R00939
KEGG reaction
METACYC:DIHYDROFOLATEREDUCT-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:15012
Rhea reaction
1
1
1
1
KEGG:R00944
METACYC:FORMYLTHFDEFORMYL-RXN
RHEA:19836
reaction
UPa:UCR00944
10-formyl-5,6,7,8-tetrahydrofolate + H(2)O = 5,6,7,8-tetrahydrofolate + formate
1
LR
1
KEGG:R00944
KEGG reaction
METACYC:FORMYLTHFDEFORMYL-RXN
MetaCyc
MetaCyc REACTION
RHEA:19836
Rhea reaction
1
1
1
1
1
KEGG:R00945
METACYC:GLYOHMETRANS-RXN
RHEA:15484
reaction
UPa:UCR00945
5,10-methylene-THF + H(2)O + glycine = 5,6,7,8-tetrahydrofolate + L-serine
1
1
LR
1
RL
1
KEGG:R00945
KEGG reaction
METACYC:GLYOHMETRANS-RXN
Rhea
MetaCyc REACTION
RHEA:15484
Rhea reaction
1
1
1
1
KEGG:R00946
METACYC:HOMOCYSMETB12-RXN
RHEA:11175
reaction
UPa:UCR00946
5-methyl-THF + L-homocysteine = 5,6,7,8-tetrahydrofolate + L-methionine
1
LR
1
KEGG:R00946
KEGG reaction
METACYC:HOMOCYSMETB12-RXN
MetaCyc
MetaCyc REACTION
RHEA:11175
Rhea reaction
1
1
1
1
KEGG:R00956
METACYC:2.7.7.33-RXN
RHEA:18216
reaction
UPa:UCR00956
CTP + alpha-D-glucose 1-phosphate = CDP-glucose + diphosphate
1
LR
1
KEGG:R00956
KEGG reaction
METACYC:2.7.7.33-RXN
Rhea
MetaCyc REACTION
RHEA:18216
Rhea reaction
1
1
1
1
KEGG:R00964
METACYC:URIDINEKIN-RXN
RHEA:16828
reaction
UPa:UCR00964
ATP + uridine = ADP + UMP
1
LR
1
KEGG:R00964
KEGG reaction
METACYC:URIDINEKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:16828
Rhea reaction
1
1
1
KEGG:R00965
METACYC:OROTPDECARB-RXN
RHEA:11599
reaction
UPa:UCR00965
orotidine 5'-phosphate = CO(2) + UMP
1
LR
1
KEGG:R00965
KEGG reaction
METACYC:OROTPDECARB-RXN
MetaCyc
MetaCyc REACTION
RHEA:11599
Rhea reaction
1
1
1
1
KEGG:R00966
METACYC:URACIL-PRIBOSYLTRANS-RXN
RHEA:13020
reaction
UPa:UCR00966
UMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + uracil
1
RL
1
KEGG:R00966
KEGG reaction
METACYC:URACIL-PRIBOSYLTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:13020
Rhea reaction
1
1
1
1
KEGG:R00974
METACYC:CYTDEAM-RXN
RHEA:20608
reaction
UPa:UCR00974
H(2)O + cytosine = NH(3) + uracil
1
LR
1
KEGG:R00974
KEGG reaction
METACYC:CYTDEAM-RXN
MetaCyc
MetaCyc REACTION
RHEA:20608
Rhea reaction
1
1
1
1
1
KEGG:R00976
METACYC:URACIL-DEHYDROGENASE-RXN
RHEA:22755
reaction
UPa:UCR00976
H(2)O + acceptor + uracil = barbiturate + reduced acceptor
1
LR
1
KEGG:R00976
KEGG reaction
METACYC:URACIL-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22755
Rhea reaction
1
1
1
1
1
KEGG:R00985
reaction
UPa:UCR00985
NH(3) + chorismate = H(2)O + anthranilate + pyruvate
1
LR
1
KEGG:R00985
KEGG reaction
1
1
1
1
KEGG:R00987
METACYC:KYNURENINASE-RXN
RHEA:16816
reaction
UPa:UCR00987
H(2)O + L-kynurenine = L-alanine + anthranilate
1
LR
1
KEGG:R00987
KEGG reaction
METACYC:KYNURENINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16816
Rhea reaction
1
1
1
1
1
1
KEGG:R00994
RHEA:32718
reaction
UPa:UCR00994
2-oxobutanoate + CO(2) + H(+) + NADH = D-erythro-3-methylmalic acid + NAD(+)
1
RL
1
KEGG:R00994
KEGG reaction
RHEA:32718
Rhea reaction
1
1
1
KEGG:R00996
METACYC:THREDEHYD-RXN
RHEA:22111
reaction
UPa:UCR00996
L-threonine = 2-oxobutanoate + NH(3)
1
1
LR
1
LR
1
KEGG:R00996
KEGG reaction
METACYC:THREDEHYD-RXN
MetaCyc
MetaCyc REACTION
RHEA:22111
Rhea reaction
1
1
1
1
1
KEGG:R01001
METACYC:RXN-15130
RHEA:14008
reaction
UPa:UCR01001
H(2)O + L-cystathionine = 2-oxobutanoate + L-cysteine + NH(3)
1
LR
1
KEGG:R01001
KEGG reaction
METACYC:RXN-15130
MetaCyc
MetaCyc REACTION
RHEA:14008
Rhea reaction
1
1
1
1
KEGG:R01011
METACYC:GLYCERONE-KINASE-RXN
RHEA:15776
reaction
UPa:UCR01011
ATP + glycerone = ADP + glycerone phosphate
1
LR
1
KEGG:R01011
KEGG reaction
METACYC:GLYCERONE-KINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15776
Rhea reaction
1
1
KEGG:R01015
METACYC:TRIOSEPISOMERIZATION-RXN
RHEA:18588
reaction
UPa:UCR01015
D-glyceraldehyde 3-phosphate = glycerone phosphate
1
RL
1
KEGG:R01015
KEGG reaction
METACYC:TRIOSEPISOMERIZATION-RXN
Rhea
MetaCyc REACTION
RHEA:18588
Rhea reaction
1
1
1
1
KEGG:R01021
METACYC:CHOLINE-KINASE-RXN
RHEA:12840
reaction
UPa:UCR01021
ATP + choline = ADP + phosphocholine
1
LR
1
KEGG:R01021
KEGG reaction
METACYC:CHOLINE-KINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12840
Rhea reaction
1
1
1
1
KEGG:R01022
METACYC:CHOLINE-OXIDASE-RXN
RHEA:13508
reaction
UPa:UCR01022
O(2) + choline = H(2)O(2) + betaine aldehyde
1
LR
1
KEGG:R01022
KEGG reaction
METACYC:CHOLINE-OXIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13508
Rhea reaction
1
1
1
1
KEGG:R01025
METACYC:CHD-RXN
RHEA:17436
reaction
UPa:UCR01025
acceptor + choline = betaine aldehyde + reduced acceptor
1
LR
1
KEGG:R01025
KEGG reaction
METACYC:CHD-RXN
Rhea
MetaCyc REACTION
RHEA:17436
Rhea reaction
1
1
1
1
KEGG:R01028
METACYC:CHOLINE-SULFATASE-RXN
RHEA:20823
reaction
UPa:UCR01028
H(2)O + choline sulfate = choline + sulfate
1
LR
1
KEGG:R01028
KEGG reaction
METACYC:CHOLINE-SULFATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20823
Rhea reaction
1
1
1
1
1
KEGG:R01034
METACYC:GLYCDEH-RXN
RHEA:13772
reaction
UPa:UCR01034
NAD(+) + glycerol = H(+) + NADH + glycerone
1
LR
1
KEGG:R01034
KEGG reaction
METACYC:GLYCDEH-RXN
Rhea
MetaCyc REACTION
RHEA:13772
Rhea reaction
1
1
1
KEGG:R01047
METACYC:GLYCEROL-DEHYDRATASE-RXN
RHEA:19768
reaction
UPa:UCR01047
glycerol = 3-hydroxypropanal + H(2)O
1
LR
1
KEGG:R01047
KEGG reaction
METACYC:GLYCEROL-DEHYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19768
Rhea reaction
1
1
1
1
KEGG:R01049
METACYC:PRPPSYN-RXN
RHEA:15612
reaction
UPa:UCR01049
ATP + D-ribose 5-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + AMP
1
LR
1
KEGG:R01049
KEGG reaction
METACYC:PRPPSYN-RXN
Rhea
MetaCyc REACTION
RHEA:15612
Rhea reaction
1
1
1
1
KEGG:R01051
METACYC:RIBOKIN-RXN
RHEA:13700
reaction
UPa:UCR01051
ATP + D-ribose = ADP + D-ribose 5-phosphate
1
LR
1
KEGG:R01051
KEGG reaction
METACYC:RIBOKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:13700
Rhea reaction
1
1
KEGG:R01056
METACYC:RIB5PISOM-RXN
RHEA:14660
reaction
UPa:UCR01056
D-ribose 5-phosphate = D-ribulose 5-phosphate
1
RL
1
KEGG:R01056
KEGG reaction
METACYC:RIB5PISOM-RXN
Rhea
MetaCyc REACTION
RHEA:14660
Rhea reaction
1
1
KEGG:R01057
METACYC:PPENTOMUT-RXN
RHEA:18796
reaction
UPa:UCR01057
alpha-D-ribose 1-phosphate = D-ribose 5-phosphate
1
RL
1
KEGG:R01057
KEGG reaction
METACYC:PPENTOMUT-RXN
Rhea
MetaCyc REACTION
RHEA:18796
Rhea reaction
1
1
1
1
1
1
KEGG:R01061
METACYC:GAPOXNPHOSPHN-RXN
RHEA:10303
reaction
UPa:UCR01061
D-glyceraldehyde 3-phosphate + NAD(+) + phosphate = 3-phospho-D-glyceroyl phosphate + H(+) + NADH
1
LR
1
KEGG:R01061
KEGG reaction
METACYC:GAPOXNPHOSPHN-RXN
Rhea
MetaCyc REACTION
RHEA:10303
Rhea reaction
1
1
1
KEGG:R01064
METACYC:DEHYDDEOXPHOSGALACT-ALDOL-RXN
RHEA:24467
reaction
UPa:UCR01064
6-phospho-2-dehydro-3-deoxy-D-galactonic acid = D-glyceraldehyde 3-phosphate + pyruvate
1
LR
1
KEGG:R01064
KEGG reaction
METACYC:DEHYDDEOXPHOSGALACT-ALDOL-RXN
Rhea
MetaCyc REACTION
RHEA:24467
Rhea reaction
1
1
1
KEGG:R01066
METACYC:DEOXYRIBOSE-P-ALD-RXN
RHEA:12824
reaction
UPa:UCR01066
2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde
1
LR
1
KEGG:R01066
KEGG reaction
METACYC:DEOXYRIBOSE-P-ALD-RXN
Rhea
MetaCyc REACTION
RHEA:12824
Rhea reaction
1
1
1
KEGG:R01068
METACYC:F16ALDOLASE-RXN
RHEA:14732
reaction
UPa:UCR01068
D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + glycerone phosphate
1
LR
1
KEGG:R01068
KEGG reaction
METACYC:F16ALDOLASE-RXN
Rhea
MetaCyc REACTION
RHEA:14732
Rhea reaction
1
1
1
KEGG:R01069
METACYC:TAGAALDOL-RXN
RHEA:22951
reaction
UPa:UCR01069
D-tagatose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + glycerone phosphate
1
LR
1
KEGG:R01069
KEGG reaction
METACYC:TAGAALDOL-RXN
Rhea
MetaCyc REACTION
RHEA:22951
Rhea reaction
1
1
1
1
KEGG:R01071
METACYC:ATPPHOSPHORIBOSYLTRANS-RXN
RHEA:18476
reaction
UPa:UCR01071
1-(5-phospho-D-ribosyl)-ATP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + ATP
1
RL
1
KEGG:R01071
KEGG reaction
METACYC:ATPPHOSPHORIBOSYLTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:18476
Rhea reaction
1
1
1
1
1
1
KEGG:R01072
METACYC:PRPPAMIDOTRANS-RXN
RHEA:14908
reaction
UPa:UCR01072
5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + H(2)O + L-glutamine
1
RL
1
KEGG:R01072
KEGG reaction
METACYC:PRPPAMIDOTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:14908
Rhea reaction
1
1
1
1
KEGG:R01073
METACYC:PRTRANS-RXN
RHEA:11771
reaction
UPa:UCR01073
N-(5-phospho-beta-D-ribosyl)anthranilic acid + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + anthranilate
1
RL
1
KEGG:R01073
KEGG reaction
METACYC:PRTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:11771
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R01078
METACYC:2.8.1.6-RXN
RHEA:22063
reaction
UPa:UCR01078
2 H(+) + 2 S-adenosyl-L-methionine + dethiobiotin + 2 e- + sulfur donor = 2 5'-deoxyadenosine + 2 L-methionine + biotin
1
LR
1
KEGG:R01078
KEGG reaction
METACYC:2.8.1.6-RXN
MetaCyc
MetaCyc REACTION
RHEA:22063
Rhea reaction
1
1
1
1
KEGG:R01080
METACYC:URIDINE-NUCLEOSIDASE-RXN
RHEA:15580
reaction
UPa:UCR01080
H(2)O + uridine = D-ribose + uracil
1
LR
1
KEGG:R01080
KEGG reaction
METACYC:URIDINE-NUCLEOSIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15580
Rhea reaction
1
1
1
KEGG:R01082
METACYC:FUMHYDR-RXN
RHEA:12463
reaction
UPa:UCR01082
(S)-malate = H(2)O + fumarate
1
RL
1
KEGG:R01082
KEGG reaction
METACYC:FUMHYDR-RXN
Rhea
MetaCyc REACTION
RHEA:12463
Rhea reaction
1
1
1
KEGG:R01083
METACYC:AMPSYN-RXN
RHEA:16856
reaction
UPa:UCR01083
N(6)-(1,2-dicarboxyethyl)-AMP = AMP + fumarate
1
LR
1
KEGG:R01083
KEGG reaction
METACYC:AMPSYN-RXN
Rhea
MetaCyc REACTION
RHEA:16856
Rhea reaction
1
1
1
KEGG:R01086
METACYC:ARGSUCCINLYA-RXN
RHEA:24023
reaction
UPa:UCR01086
(N(omega)-L-arginino)succinate = L-arginine + fumarate
1
1
LR
1
LR
1
KEGG:R01086
KEGG reaction
METACYC:ARGSUCCINLYA-RXN
Rhea
MetaCyc REACTION
RHEA:24023
Rhea reaction
1
1
1
1
1
1
1
KEGG:R01088
METACYC:LEUCINE-DEHYDROGENASE-RXN
RHEA:12223
reaction
UPa:UCR01088
H(2)O + L-leucine + NAD(+) = 4-methyl-2-oxopentanoate + H(+) + NADH + NH(3)
1
LR
1
KEGG:R01088
KEGG reaction
METACYC:LEUCINE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:12223
Rhea reaction
1
1
1
1
KEGG:R01090
METACYC:BRANCHED-CHAINAMINOTRANSFERLEU-RXN
RHEA:18324
reaction
UPa:UCR01090
2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamate
1
1
RL
1
LR
1
KEGG:R01090
KEGG reaction
METACYC:BRANCHED-CHAINAMINOTRANSFERLEU-RXN
Rhea
MetaCyc REACTION
RHEA:18324
Rhea reaction
1
1
1
1
1
1
KEGG:R01121
METACYC:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN
RHEA:23735
reaction
UPa:UCR01121
(R)-5-diphosphomevalonate + ATP = ADP + CO(2) + isopentenyl diphosphate + phosphate
1
LR
1
KEGG:R01121
KEGG reaction
METACYC:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN
Rhea
MetaCyc REACTION
RHEA:23735
Rhea reaction
1
1
KEGG:R01123
METACYC:IPPISOM-RXN
RHEA:23287
reaction
UPa:UCR01123
isopentenyl diphosphate = dimethylallyl diphosphate
1
LR
1
KEGG:R01123
KEGG reaction
METACYC:IPPISOM-RXN
Rhea
MetaCyc REACTION
RHEA:23287
Rhea reaction
1
1
1
KEGG:R01127
METACYC:IMPCYCLOHYDROLASE-RXN
RHEA:18448
reaction
UPa:UCR01127
H(2)O + IMP = 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1
RL
1
KEGG:R01127
KEGG reaction
METACYC:IMPCYCLOHYDROLASE-RXN
Rhea
MetaCyc REACTION
RHEA:18448
Rhea reaction
1
1
1
1
1
1
KEGG:R01130
METACYC:IMP-DEHYDROG-RXN
RHEA:11711
reaction
UPa:UCR01130
H(2)O + IMP + NAD(+) = H(+) + NADH + XMP
1
LR
1
KEGG:R01130
KEGG reaction
METACYC:IMP-DEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:11711
Rhea reaction
1
1
1
1
KEGG:R01131
METACYC:INOSINEKIN-RXN
RHEA:21143
reaction
UPa:UCR01131
ATP + inosine = ADP + IMP
1
LR
1
KEGG:R01131
KEGG reaction
METACYC:INOSINEKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:21143
Rhea reaction
1
1
1
1
KEGG:R01132
METACYC:HYPOXANPRIBOSYLTRAN-RXN
RHEA:17976
reaction
UPa:UCR01132
IMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + hypoxanthine
1
RL
1
KEGG:R01132
KEGG reaction
METACYC:HYPOXANPRIBOSYLTRAN-RXN
Rhea
MetaCyc REACTION
RHEA:17976
Rhea reaction
1
1
1
1
1
1
KEGG:R01135
METACYC:ADENYLOSUCCINATE-SYNTHASE-RXN
RHEA:15756
reaction
UPa:UCR01135
GTP + IMP + L-aspartate = GDP + N(6)-(1,2-dicarboxyethyl)-AMP + phosphate
1
LR
1
KEGG:R01135
KEGG reaction
METACYC:ADENYLOSUCCINATE-SYNTHASE-RXN
Rhea
MetaCyc REACTION
RHEA:15756
Rhea reaction
1
1
1
1
1
1
KEGG:R01151
METACYC:PUTRESCINE-OXIDASE-RXN
RHEA:18276
reaction
UPa:UCR01151
H(2)O + O(2) + putrescine = 4-aminobutanal + H(2)O(2) + NH(3)
1
LR
1
KEGG:R01151
KEGG reaction
METACYC:PUTRESCINE-OXIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:18276
Rhea reaction
1
1
1
1
1
KEGG:R01152
METACYC:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN
RHEA:22287
reaction
UPa:UCR01152
H(2)O + N-carbamoylputrescine = CO(2) + NH(3) + putrescine
1
LR
1
KEGG:R01152
KEGG reaction
METACYC:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22287
Rhea reaction
1
1
1
1
KEGG:R01154
METACYC:RXN-0
RHEA:25184
reaction
UPa:UCR01154
acetyl-CoA + putrescine = CoA + N-acetylputrescine
1
LR
1
KEGG:R01154
KEGG reaction
METACYC:RXN-0
MetaCyc
MetaCyc REACTION
RHEA:25184
Rhea reaction
1
1
1
1
KEGG:R01155
METACYC:PUTTRANSAM-RXN
RHEA:23819
reaction
UPa:UCR01155
2-oxoglutarate + putrescine = 4-aminobutanal + L-glutamate
1
LR
1
KEGG:R01155
KEGG reaction
METACYC:PUTTRANSAM-RXN
Rhea
MetaCyc REACTION
RHEA:23819
Rhea reaction
1
1
1
1
KEGG:R01157
METACYC:AGMATIN-RXN
RHEA:13932
reaction
UPa:UCR01157
H(2)O + agmatine = putrescine + urea
1
LR
1
KEGG:R01157
KEGG reaction
METACYC:AGMATIN-RXN
Rhea
MetaCyc REACTION
RHEA:13932
Rhea reaction
1
1
1
1
1
1
KEGG:R01158
METACYC:RXN-8001
RHEA:20644
reaction
UPa:UCR01158
H(2)O + L-histidinol + 2 NAD(+) = 2 H(+) + L-histidine + 2 NADH
1
LR
1
KEGG:R01158
KEGG reaction
METACYC:RXN-8001
Rhea
MetaCyc REACTION
RHEA:20644
Rhea reaction
1
1
1
KEGG:R01167
METACYC:HISTIDINE-DECARBOXYLASE-RXN
RHEA:20843
reaction
UPa:UCR01167
L-histidine = CO(2) + histamine
1
LR
1
KEGG:R01167
KEGG reaction
METACYC:HISTIDINE-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20843
Rhea reaction
1
1
1
KEGG:R01168
METACYC:HISTIDINE-AMMONIA-LYASE-RXN
RHEA:21235
reaction
UPa:UCR01168
L-histidine = NH(3) + trans-urocanate
1
LR
1
KEGG:R01168
KEGG reaction
METACYC:HISTIDINE-AMMONIA-LYASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:21235
Rhea reaction
1
1
1
1
1
KEGG:R01183
METACYC:MYO-INOSITOL-2-DEHYDROGENASE-RXN
RHEA:16952
reaction
UPa:UCR01183
NAD(+) + myo-inositol = H(+) + NADH + scyllo-inosose
1
LR
1
KEGG:R01183
KEGG reaction
METACYC:MYO-INOSITOL-2-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16952
Rhea reaction
1
1
1
1
KEGG:R01184
METACYC:MYO-INOSITOL-OXYGENASE-RXN
RHEA:23699
reaction
UPa:UCR01184
O(2) + myo-inositol = D-glucuronate + H(2)O
1
LR
1
KEGG:R01184
KEGG reaction
METACYC:MYO-INOSITOL-OXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23699
Rhea reaction
1
1
1
1
KEGG:R01187
METACYC:MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN
RHEA:30742
reaction
UPa:UCR01187
1D-myo-inositol 3-phosphate + H(2)O = myo-inositol + phosphate
1
LR
1
KEGG:R01187
KEGG reaction
METACYC:MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:30742
Rhea reaction
1
1
1
1
1
1
1
KEGG:R01197
METACYC:2-OXOGLUTARATE-SYNTHASE-RXN
RHEA:17300
reaction
UPa:UCR01197
CO(2) + 2 H(+) + 2 reduced ferredoxin + succinyl-CoA = 2-oxoglutarate + CoA + 2 oxidized ferredoxin
1
RL
1
KEGG:R01197
KEGG reaction
METACYC:2-OXOGLUTARATE-SYNTHASE-RXN
Rhea
MetaCyc REACTION
RHEA:17300
Rhea reaction
1
1
1
1
1
KEGG:R01213
METACYC:2-ISOPROPYLMALATESYN-RXN
RHEA:21527
reaction
UPa:UCR01213
(2S)-2-isopropylmalate + CoA = 3-methyl-2-oxobutanoate + H(2)O + acetyl-CoA
1
RL
1
KEGG:R01213
KEGG reaction
METACYC:2-ISOPROPYLMALATESYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:21527
Rhea reaction
1
1
1
1
KEGG:R01214
METACYC:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
RHEA:24816
reaction
UPa:UCR01214
2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoate + L-glutamate
1
RL
1
KEGG:R01214
KEGG reaction
METACYC:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
Rhea
MetaCyc REACTION
RHEA:24816
Rhea reaction
1
1
1
1
1
KEGG:R01226
METACYC:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN
RHEA:11827
reaction
UPa:UCR01226
3-methyl-2-oxobutanoate + 5,10-methylene-THF + H(2)O = 2-dehydropantoate + 5,6,7,8-tetrahydrofolate
1
LR
1
KEGG:R01226
KEGG reaction
METACYC:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN
Rhea
MetaCyc REACTION
RHEA:11827
Rhea reaction
1
1
1
1
KEGG:R01229
METACYC:GUANPRIBOSYLTRAN-RXN
RHEA:25427
reaction
UPa:UCR01229
GMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + guanine
1
RL
1
KEGG:R01229
KEGG reaction
METACYC:GUANPRIBOSYLTRAN-RXN
Rhea
MetaCyc REACTION
RHEA:25427
Rhea reaction
1
1
1
1
1
1
KEGG:R01230
METACYC:GMP-SYN-NH3-RXN
RHEA:18304
reaction
UPa:UCR01230
ATP + NH(3) + XMP = AMP + GMP + diphosphate
1
LR
1
KEGG:R01230
KEGG reaction
METACYC:GMP-SYN-NH3-RXN
MetaCyc
MetaCyc REACTION
RHEA:18304
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R01231
METACYC:GMP-SYN-GLUT-RXN
RHEA:11683
reaction
UPa:UCR01231
ATP + H(2)O + L-glutamine + XMP = AMP + GMP + L-glutamate + diphosphate
1
LR
1
KEGG:R01231
KEGG reaction
METACYC:GMP-SYN-GLUT-RXN
MetaCyc
MetaCyc REACTION
RHEA:11683
Rhea reaction
1
1
1
KEGG:R01234
METACYC:35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN
RHEA:16960
reaction
UPa:UCR01234
3',5'-cyclic GMP + H(2)O = GMP
1
LR
1
KEGG:R01234
KEGG reaction
METACYC:35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16960
Rhea reaction
1
1
1
1
1
KEGG:R01248
RHEA:14108
reaction
UPa:UCR01248
L-proline + NAD(+) = (S)-1-pyrroline-5-carboxylic acid + H(+) + NADH
1
RL
2
KEGG:R01248
KEGG reaction
RHEA:14108
Rhea reaction
1
1
1
1
KEGG:R01253
METACYC:RXN-14903
RHEA:23787
reaction
UPa:UCR01253
L-proline + Quinone = (S)-1-pyrroline-5-carboxylic acid + Hydroquinone
1
LR
1
KEGG:R01253
KEGG reaction
METACYC:RXN-14903
MetaCyc
MetaCyc REACTION
RHEA:23787
Rhea reaction
1
1
1
1
KEGG:R01268
METACYC:NICOTINAMID-RXN
RHEA:14548
reaction
UPa:UCR01268
H(2)O + nicotinamide = NH(3) + nicotinate
1
LR
1
KEGG:R01268
KEGG reaction
METACYC:NICOTINAMID-RXN
MetaCyc
MetaCyc REACTION
RHEA:14548
Rhea reaction
1
1
1
1
KEGG:R01271
METACYC:2.4.2.12-RXN
RHEA:16152
reaction
UPa:UCR01271
diphosphate + nicotinamide D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + nicotinamide
1
RL
1
KEGG:R01271
KEGG reaction
METACYC:2.4.2.12-RXN
MetaCyc
MetaCyc REACTION
RHEA:16152
Rhea reaction
1
1
1
1
1
KEGG:R01286
METACYC:CYSTATHIONINE-BETA-LYASE-RXN
RHEA:13968
reaction
UPa:UCR01286
H(2)O + L-cystathionine = L-homocysteine + NH(3) + pyruvate
1
LR
1
KEGG:R01286
KEGG reaction
METACYC:CYSTATHIONINE-BETA-LYASE-RXN
Rhea
MetaCyc REACTION
RHEA:13968
Rhea reaction
1
1
1
1
KEGG:R01287
METACYC:ACETYLHOMOSER-CYS-RXN
RHEA:27825
reaction
UPa:UCR01287
O-acetyl-L-homoserine + hydrogen sulfide = L-homocysteine + acetate
1
LR
1
KEGG:R01287
KEGG reaction
METACYC:ACETYLHOMOSER-CYS-RXN
Rhea
MetaCyc REACTION
RHEA:27825
Rhea reaction
1
1
1
1
KEGG:R01288
METACYC:RXN-9384
RHEA:27829
reaction
UPa:UCR01288
O-succinyl-L-homoserine + hydrogen sulfide = L-homocysteine + succinate
1
LR
1
KEGG:R01288
KEGG reaction
METACYC:RXN-9384
Rhea
MetaCyc REACTION
RHEA:27829
Rhea reaction
1
1
1
1
KEGG:R01290
METACYC:CYSTATHIONINE-BETA-SYNTHASE-RXN
RHEA:10115
reaction
UPa:UCR01290
L-homocysteine + L-serine = H(2)O + L-cystathionine
1
LR
1
KEGG:R01290
KEGG reaction
METACYC:CYSTATHIONINE-BETA-SYNTHASE-RXN
Rhea
MetaCyc REACTION
RHEA:10115
Rhea reaction
1
1
1
1
1
1
1
KEGG:R01295
METACYC:BENZOATE-4-MONOOXYGENASE-RXN
RHEA:18036
reaction
UPa:UCR01295
H(+) + NADPH + O(2) + benzoate = 4-hydroxybenzoate + H(2)O + NADP(+)
1
LR
1
KEGG:R01295
KEGG reaction
METACYC:BENZOATE-4-MONOOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:18036
Rhea reaction
1
1
1
1
1
1
1
KEGG:R01298
METACYC:1.14.13.33-RXN
METACYC:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN
RHEA:19480
reaction
UPa:UCR01298
4-hydroxybenzoate + H(+) + NADPH + O(2) = 3,4-dihydroxybenzoate + H(2)O + NADP(+)
1
LR
1
KEGG:R01298
KEGG reaction
METACYC:1.14.13.33-RXN
MetaCyc
Rhea
MetaCyc REACTION
METACYC:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19480
Rhea reaction
1
1
1
1
KEGG:R01301
METACYC:3.1.2.23-RXN
RHEA:11951
reaction
UPa:UCR01301
4-hydroxybenzoyl-CoA + H(2)O = 4-hydroxybenzoate + CoA
1
LR
1
KEGG:R01301
KEGG reaction
METACYC:3.1.2.23-RXN
MetaCyc
MetaCyc REACTION
RHEA:11951
Rhea reaction
1
1
1
1
KEGG:R01321
METACYC:RXN-5781
RHEA:10311
RHEA:32942
reaction
UPa:UCR01321
1,2-diacyl-sn-glycerol + CDP-choline = CMP + phosphatidylcholine
1
LR
1
KEGG:R01321
KEGG reaction
METACYC:RXN-5781
Rhea
MetaCyc REACTION
RHEA:10311
Rhea reaction
RHEA:32942
Rhea reaction
1
1
1
KEGG:R01325
METACYC:ACONITATEDEHYDR-RXN
RHEA:10231
reaction
UPa:UCR01325
citrate = H(2)O + cis-aconitate
1
LR
1
KEGG:R01325
KEGG reaction
METACYC:ACONITATEDEHYDR-RXN
Rhea
MetaCyc REACTION
RHEA:10231
Rhea reaction
1
1
1
1
KEGG:R01334
METACYC:GPH-RXN
RHEA:14372
reaction
UPa:UCR01334
2-phosphoglycolate + H(2)O = glycolate + phosphate
1
1
LR
1
LR
1
KEGG:R01334
KEGG reaction
METACYC:GPH-RXN
MetaCyc
MetaCyc REACTION
RHEA:14372
Rhea reaction
1
1
1
1
KEGG:R01353
METACYC:PROPKIN-RXN
RHEA:23151
reaction
UPa:UCR01353
ATP + propanoate = ADP + propanoyl phosphate
1
RL
1
KEGG:R01353
KEGG reaction
METACYC:PROPKIN-RXN
Rhea
MetaCyc REACTION
RHEA:23151
Rhea reaction
1
1
1
KEGG:R01355
METACYC:23-DIMETHYLMALATE-LYASE-RXN
RHEA:10475
reaction
UPa:UCR01355
(2R,3S)-2,3-dimethylmalate = propanoate + pyruvate
1
LR
1
KEGG:R01355
KEGG reaction
METACYC:23-DIMETHYLMALATE-LYASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:10475
Rhea reaction
1
1
1
KEGG:R01360
METACYC:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN
RHEA:24407
reaction
UPa:UCR01360
(S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA
1
LR
1
KEGG:R01360
KEGG reaction
METACYC:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:24407
Rhea reaction
1
1
1
1
KEGG:R01364
METACYC:FUMARYLACETOACETASE-RXN
RHEA:10247
reaction
UPa:UCR01364
acetoacetate + fumarate = 4-fumarylacetoacetate + H(2)O
1
RL
1
KEGG:R01364
KEGG reaction
METACYC:FUMARYLACETOACETASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:10247
Rhea reaction
1
1
1
1
KEGG:R01373
METACYC:PREPHENATEDEHYDRAT-RXN
RHEA:21651
reaction
UPa:UCR01373
prephenate = CO(2) + H(2)O + phenylpyruvate
1
LR
1
KEGG:R01373
KEGG reaction
METACYC:PREPHENATEDEHYDRAT-RXN
Rhea
MetaCyc REACTION
RHEA:21651
Rhea reaction
1
1
1
KEGG:R01384
METACYC:UDP-GLUCURONATE-DECARBOXYLASE-RXN
RHEA:23919
reaction
UPa:UCR01384
UDP-alpha-D-glucuronate = CO(2) + UDP-alpha-D-xylose
1
LR
1
KEGG:R01384
KEGG reaction
METACYC:UDP-GLUCURONATE-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23919
Rhea reaction
1
1
1
1
1
KEGG:R01388
METACYC:GLYCERATE-DEHYDROGENASE-RXN
RHEA:17908
reaction
UPa:UCR01388
D-glycerate + NAD(+) = 3-hydroxypyruvate + H(+) + NADH
1
1
RL
1
LR
1
KEGG:R01388
KEGG reaction
METACYC:GLYCERATE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:17908
Rhea reaction
1
1
1
1
1
KEGG:R01392
METACYC:RXN0-300
RHEA:18660
reaction
UPa:UCR01392
D-glycerate + NADP(+) = 3-hydroxypyruvate + H(+) + NADPH
1
LR
1
KEGG:R01392
KEGG reaction
METACYC:RXN0-300
MetaCyc
Rhea
MetaCyc REACTION
RHEA:18660
Rhea reaction
1
1
1
1
KEGG:R01397
METACYC:ASPCARBTRANS-RXN
RHEA:20016
reaction
UPa:UCR01397
L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + phosphate
1
LR
1
KEGG:R01397
KEGG reaction
METACYC:ASPCARBTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:20016
Rhea reaction
1
1
1
1
KEGG:R01398
METACYC:ORNCARBAMTRANSFER-RXN
RHEA:19516
reaction
UPa:UCR01398
L-ornithine + carbamoyl phosphate = L-citrulline + phosphate
1
1
1
LR
1
LR
1
RL
1
KEGG:R01398
KEGG reaction
METACYC:ORNCARBAMTRANSFER-RXN
Rhea
MetaCyc REACTION
RHEA:19516
Rhea reaction
1
1
1
1
KEGG:R01399
METACYC:PUTRESCINE-CARBAMOYLTRANSFERASE-RXN
RHEA:21939
reaction
UPa:UCR01399
carbamoyl phosphate + putrescine = N-carbamoylputrescine + phosphate
1
RL
1
KEGG:R01399
KEGG reaction
METACYC:PUTRESCINE-CARBAMOYLTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:21939
Rhea reaction
1
1
1
1
KEGG:R01401
METACYC:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN
RHEA:13620
reaction
UPa:UCR01401
H(2)O + S-methyl-5'-thioadenosine = 5-methylthio-alpha-D-ribose + adenine
1
LR
1
KEGG:R01401
KEGG reaction
METACYC:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13620
Rhea reaction
1
1
1
1
KEGG:R01402
METACYC:5-METHYLTHIOADENOSINE-PHOSPHORYLASE-RXN
RHEA:11855
reaction
UPa:UCR01402
S-methyl-5'-thioadenosine + phosphate = S-methyl-5-thio-alpha-D-ribose 1-phosphate + adenine
1
LR
1
KEGG:R01402
KEGG reaction
METACYC:5-METHYLTHIOADENOSINE-PHOSPHORYLASE-RXN
Rhea
MetaCyc REACTION
RHEA:11855
Rhea reaction
1
1
1
1
KEGG:R01416
METACYC:AGMATINE-DEIMINASE-RXN
RHEA:18040
reaction
UPa:UCR01416
H(2)O + agmatine = N-carbamoylputrescine + NH(3)
1
LR
1
KEGG:R01416
KEGG reaction
METACYC:AGMATINE-DEIMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:18040
Rhea reaction
1
1
1
1
1
1
KEGG:R01419
METACYC:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN
RHEA:11843
reaction
UPa:UCR01419
H(2)O + NAD(+) + benzaldehyde = H(+) + NADH + benzoate
1
LR
1
KEGG:R01419
KEGG reaction
METACYC:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN
Rhea
MetaCyc REACTION
RHEA:11843
Rhea reaction
1
1
1
1
1
1
KEGG:R01420
METACYC:BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN
RHEA:21663
reaction
UPa:UCR01420
H(2)O + NADP(+) + benzaldehyde = H(+) + NADPH + benzoate
1
LR
1
KEGG:R01420
KEGG reaction
METACYC:BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN
MetaCyc
MetaCyc REACTION
RHEA:21663
Rhea reaction
1
1
1
1
1
KEGG:R01465
METACYC:THREODEHYD-RXN
RHEA:13164
reaction
UPa:UCR01465
L-threonine + NAD(+) = H(+) + L-2-amino-3-oxobutanoic acid + NADH
1
LR
1
KEGG:R01465
KEGG reaction
METACYC:THREODEHYD-RXN
MetaCyc
MetaCyc REACTION
RHEA:13164
Rhea reaction
1
1
1
1
KEGG:R01466
METACYC:THRESYN-RXN
RHEA:10843
reaction
UPa:UCR01466
H(2)O + O-phospho-L-homoserine = L-threonine + phosphate
1
LR
1
KEGG:R01466
KEGG reaction
METACYC:THRESYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:10843
Rhea reaction
1
1
1
1
KEGG:R01468
METACYC:ETHANOLAMINE-KINASE-RXN
RHEA:13072
reaction
UPa:UCR01468
ATP + ethanolamine = ADP + phosphoethanolamine
1
LR
1
KEGG:R01468
KEGG reaction
METACYC:ETHANOLAMINE-KINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13072
Rhea reaction
1
1
KEGG:R01473
METACYC:UDP-ARABINOSE-4-EPIMERASE-RXN
RHEA:11323
reaction
UPa:UCR01473
UDP-L-arabinose = UDP-alpha-D-xylose
1
RL
1
KEGG:R01473
KEGG reaction
METACYC:UDP-ARABINOSE-4-EPIMERASE-RXN
Rhea
MetaCyc REACTION
RHEA:11323
Rhea reaction
1
1
1
1
1
KEGG:R01481
METACYC:GLUCURONATE-REDUCTASE-RXN
RHEA:14912
reaction
UPa:UCR01481
L-gulonate + NADP(+) = D-glucuronate + H(+) + NADPH
1
RL
1
KEGG:R01481
KEGG reaction
METACYC:GLUCURONATE-REDUCTASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14912
Rhea reaction
1
1
1
1
KEGG:R01512
METACYC:PHOSGLYPHOS-RXN
RHEA:14804
reaction
UPa:UCR01512
3-phospho-D-glycerate + ATP = 3-phospho-D-glyceroyl phosphate + ADP
1
RL
1
KEGG:R01512
KEGG reaction
METACYC:PHOSGLYPHOS-RXN
Rhea
MetaCyc REACTION
RHEA:14804
Rhea reaction
1
1
1
1
1
KEGG:R01513
METACYC:PGLYCDEHYDROG-RXN
RHEA:12644
reaction
UPa:UCR01513
3-phospho-D-glycerate + NAD(+) = 3-phosphohydroxypyruvate + H(+) + NADH
1
LR
1
KEGG:R01513
KEGG reaction
METACYC:PGLYCDEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:12644
Rhea reaction
1
1
1
1
KEGG:R01514
METACYC:GLY3KIN-RXN
RHEA:23519
reaction
UPa:UCR01514
ATP + D-glycerate = 3-phospho-D-glycerate + ADP
1
1
LR
1
LR
1
KEGG:R01514
KEGG reaction
METACYC:GLY3KIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:23519
Rhea reaction
1
1
KEGG:R01518
METACYC:3PGAREARR-RXN
RHEA:15904
reaction
UPa:UCR01518
2-phospho-D-glycerate = 3-phospho-D-glycerate
1
RL
1
KEGG:R01518
KEGG reaction
METACYC:3PGAREARR-RXN
Rhea
MetaCyc REACTION
RHEA:15904
Rhea reaction
1
1
1
KEGG:R01519
METACYC:GLUCONOLACT-RXN
RHEA:10443
reaction
UPa:UCR01519
D-glucono-1,5-lactone + H(2)O = D-gluconate
1
LR
1
KEGG:R01519
KEGG reaction
METACYC:GLUCONOLACT-RXN
MetaCyc
MetaCyc REACTION
RHEA:10443
Rhea reaction
1
1
1
1
1
1
KEGG:R01528
METACYC:RXN-9952
RHEA:10119
reaction
UPa:UCR01528
6-phospho-D-gluconate + NADP(+) = CO(2) + D-ribulose 5-phosphate + H(+) + NADPH
1
LR
1
KEGG:R01528
KEGG reaction
METACYC:RXN-9952
MetaCyc
MetaCyc REACTION
RHEA:10119
Rhea reaction
1
1
KEGG:R01529
METACYC:RIBULP3EPIM-RXN
RHEA:13680
reaction
UPa:UCR01529
D-ribulose 5-phosphate = D-xylulose 5-phosphate
1
LR
1
KEGG:R01529
KEGG reaction
METACYC:RIBULP3EPIM-RXN
Rhea
MetaCyc REACTION
RHEA:13680
Rhea reaction
1
1
KEGG:R01530
METACYC:DARAB5PISOM-RXN
RHEA:23107
reaction
UPa:UCR01530
D-arabinose 5-phosphate = D-ribulose 5-phosphate
1
RL
1
KEGG:R01530
KEGG reaction
METACYC:DARAB5PISOM-RXN
Rhea
MetaCyc REACTION
RHEA:23107
Rhea reaction
1
1
1
1
KEGG:R01541
METACYC:DEOXYGLUCONOKIN-RXN
RHEA:14800
reaction
UPa:UCR01541
2-dehydro-3-deoxy-D-gluconate + ATP = 2-dehydro-3-deoxy-6-phospho-D-gluconic acid + ADP
1
LR
1
KEGG:R01541
KEGG reaction
METACYC:DEOXYGLUCONOKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:14800
Rhea reaction
1
1
1
1
1
KEGG:R01542
METACYC:1.1.1.127-RXN
RHEA:24235
reaction
UPa:UCR01542
2-dehydro-3-deoxy-D-gluconate + NAD(+) = 3-deoxy-D-glycero-hexo-2,5-diulosonate + H(+) + NADH
1
RL
1
KEGG:R01542
KEGG reaction
METACYC:1.1.1.127-RXN
Rhea
MetaCyc REACTION
RHEA:24235
Rhea reaction
1
1
1
1
1
KEGG:R01563
METACYC:N-CARBAMOYLSARCOSINE-AMIDASE-RXN
RHEA:20060
reaction
UPa:UCR01563
H(2)O + N-carbamoylsarcosine = CO(2) + NH(3) + sarcosine
1
LR
1
KEGG:R01563
KEGG reaction
METACYC:N-CARBAMOYLSARCOSINE-AMIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20060
Rhea reaction
1
1
1
1
1
1
KEGG:R01565
METACYC:DIMETHYLGLYCINE-DEHYDROGENASE-RXN
RHEA:22499
reaction
UPa:UCR01565
H(2)O + N,N-dimethylglycine + electron-transferring flavoprotein = formaldehyde + reduced electron-transferring flavoprotein + sarcosine
1
LR
1
KEGG:R01565
KEGG reaction
METACYC:DIMETHYLGLYCINE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22499
Rhea reaction
1
1
1
1
KEGG:R01567
METACYC:THYKI-RXN
RHEA:19132
reaction
UPa:UCR01567
ATP + thymidine = ADP + dTMP
1
LR
1
KEGG:R01567
KEGG reaction
METACYC:THYKI-RXN
Rhea
MetaCyc REACTION
RHEA:19132
Rhea reaction
1
1
1
1
KEGG:R01570
METACYC:THYM-PHOSPH-RXN
RHEA:16040
reaction
UPa:UCR01570
phosphate + thymidine = 2-deoxy-alpha-D-ribose 1-phosphate + thymine
1
RL
1
KEGG:R01570
KEGG reaction
METACYC:THYM-PHOSPH-RXN
Rhea
MetaCyc REACTION
RHEA:16040
Rhea reaction
1
1
1
1
1
KEGG:R01574
METACYC:D-ARABINOSE-1-DEHYDROGENASE-RXN
RHEA:20460
reaction
UPa:UCR01574
D-arabinose + NAD(+) = D-arabinono-1,4-lactone + H(+) + NADH
1
LR
1
KEGG:R01574
KEGG reaction
METACYC:D-ARABINOSE-1-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20460
Rhea reaction
1
1
1
1
1
KEGG:R01575
METACYC:RXN-8776
RHEA:21895
reaction
UPa:UCR01575
D-arabinose + NADP(+) = D-arabinono-1,4-lactone + H(+) + NADPH
1
LR
1
KEGG:R01575
KEGG reaction
METACYC:RXN-8776
MetaCyc
MetaCyc REACTION
RHEA:21895
Rhea reaction
1
1
1
1
1
KEGG:R01614
METACYC:RXN-87
RHEA:11939
reaction
UPa:UCR01614
4-coumaroyl-CoA + 3 malonyl-CoA = 3,4',5-trihydroxystilbene + 4 CO(2) + 4 CoA
1
LR
1
KEGG:R01614
KEGG reaction
METACYC:RXN-87
MetaCyc
MetaCyc REACTION
RHEA:11939
Rhea reaction
1
1
1
1
1
1
KEGG:R01616
METACYC:4-COUMARATE--COA-LIGASE-RXN
RHEA:19644
reaction
UPa:UCR01616
ATP + CoA + trans-4-coumarate = 4-coumaroyl-CoA + AMP + diphosphate
1
LR
1
KEGG:R01616
KEGG reaction
METACYC:4-COUMARATE--COA-LIGASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19644
Rhea reaction
1
1
1
1
KEGG:R01620
METACYC:LYSINE-N-ACETYLTRANSFERASE-RXN
RHEA:14420
reaction
UPa:UCR01620
L-lysine + acetyl phosphate = N(6)-acetyl-L-lysine + phosphate
1
LR
1
KEGG:R01620
KEGG reaction
METACYC:LYSINE-N-ACETYLTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:14420
Rhea reaction
1
1
1
KEGG:R01627
METACYC:DHSHIKIMATE-DEHYDRO-RXN
RHEA:24851
reaction
UPa:UCR01627
3-dehydroshikimate = 3,4-dihydroxybenzoate + H(2)O
1
LR
1
KEGG:R01627
KEGG reaction
METACYC:DHSHIKIMATE-DEHYDRO-RXN
MetaCyc
MetaCyc REACTION
RHEA:24851
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R01629
RHEA:30038
reaction
UPa:UCR01629
3,4-dihydroxybenzoate + H(+) + NADH + O(2) = CO(2) + H(2)O + NAD(+) + benzene-1,2,4-triol
1
LR
1
KEGG:R01629
KEGG reaction
RHEA:30038
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R01630
RHEA:30042
reaction
UPa:UCR01630
3,4-dihydroxybenzoate + H(+) + NADPH + O(2) = CO(2) + H(2)O + NADP(+) + benzene-1,2,4-triol
1
LR
1
KEGG:R01630
KEGG reaction
RHEA:30042
Rhea reaction
1
1
1
KEGG:R01631
METACYC:PROTOCATECHUATE-34-DIOXYGENASE-RXN
RHEA:10087
reaction
UPa:UCR01631
3,4-dihydroxybenzoate + O(2) = 3-carboxy-cis,cis-muconate
1
LR
1
KEGG:R01631
KEGG reaction
METACYC:PROTOCATECHUATE-34-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:10087
Rhea reaction
1
1
1
KEGG:R01635
METACYC:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN
RHEA:24187
reaction
UPa:UCR01635
4,5-dihydroxyphthalate = 3,4-dihydroxybenzoate + CO(2)
1
LR
1
KEGG:R01635
KEGG reaction
METACYC:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN
Rhea
MetaCyc REACTION
RHEA:24187
Rhea reaction
1
1
1
1
KEGG:R01639
METACYC:XYLULOKIN-RXN
RHEA:10967
reaction
UPa:UCR01639
ATP + D-xylulose = ADP + D-xylulose 5-phosphate
1
LR
1
KEGG:R01639
KEGG reaction
METACYC:XYLULOKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:10967
Rhea reaction
1
1
1
1
KEGG:R01641
METACYC:1TRANSKETO-RXN
RHEA:10511
reaction
UPa:UCR01641
D-glyceraldehyde 3-phosphate + sedoheptulose 7-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate
1
RL
1
KEGG:R01641
KEGG reaction
METACYC:1TRANSKETO-RXN
Rhea
MetaCyc REACTION
RHEA:10511
Rhea reaction
1
1
1
KEGG:R01647
RHEA:25791
reaction
UPa:UCR01647
pyruvate + succinate semialdehyde = 2,4-dihydroxyhept-2-enedioic acid
1
RL
1
KEGG:R01647
KEGG reaction
RHEA:25791
Rhea reaction
1
1
1
1
KEGG:R01648
METACYC:GABATRANSAM-RXN
RHEA:23355
reaction
UPa:UCR01648
2-oxoglutarate + 4-aminobutanoate = L-glutamate + succinate semialdehyde
1
LR
1
KEGG:R01648
KEGG reaction
METACYC:GABATRANSAM-RXN
Rhea
MetaCyc REACTION
RHEA:23355
Rhea reaction
1
1
1
1
1
1
1
KEGG:R01651
METACYC:2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN
RHEA:25180
reaction
UPa:UCR01651
4-methyl-2-oxopentanoate + CoA + NAD(+) = 3-isovaleryl-CoA + CO(2) + H(+) + NADH
1
LR
1
KEGG:R01651
KEGG reaction
METACYC:2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:25180
Rhea reaction
1
1
1
KEGG:R01652
METACYC:RXN-7800
RHEA:25081
reaction
UPa:UCR01652
4-methyl-2-oxopentanoate + CO(2) = 3-carboxy-4-methyl-2-oxopentanoate
1
RL
2
KEGG:R01652
KEGG reaction
METACYC:RXN-7800
MetaCyc
MetaCyc REACTION
RHEA:25081
Rhea reaction
1
1
1
1
KEGG:R01658
METACYC:GPPSYN-RXN
RHEA:22411
reaction
UPa:UCR01658
dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate
1
LR
1
KEGG:R01658
KEGG reaction
METACYC:GPPSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:22411
Rhea reaction
1
1
1
1
KEGG:R01676
METACYC:GUANINE-DEAMINASE-RXN
RHEA:14668
reaction
UPa:UCR01676
H(2)O + guanine = NH(3) + xanthine
1
LR
1
KEGG:R01676
KEGG reaction
METACYC:GUANINE-DEAMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14668
Rhea reaction
1
1
1
1
1
1
KEGG:R01681
METACYC:HYPOTAURINE-DEHYDROGENASE-RXN
RHEA:17388
reaction
UPa:UCR01681
H(2)O + NAD(+) + hypotaurine = H(+) + NADH + taurine
1
LR
1
KEGG:R01681
KEGG reaction
METACYC:HYPOTAURINE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:17388
Rhea reaction
1
1
1
KEGG:R01682
METACYC:CYSTAUR-RXN
RHEA:25224
reaction
UPa:UCR01682
L-cysteate = CO(2) + taurine
1
LR
1
KEGG:R01682
KEGG reaction
METACYC:CYSTAUR-RXN
Rhea
MetaCyc REACTION
RHEA:25224
Rhea reaction
1
1
1
1
1
KEGG:R01707
METACYC:PYRIDOXAL-4-DEHYDROGENASE-RXN
RHEA:21339
reaction
UPa:UCR01707
NAD(+) + pyridoxal = 4-pyridoxolactone + H(+) + NADH
1
LR
1
KEGG:R01707
KEGG reaction
METACYC:PYRIDOXAL-4-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:21339
Rhea reaction
1
1
1
1
1
KEGG:R01708
METACYC:PYRIDOXINE-4-DEHYDROGENASE-RXN
RHEA:16132
reaction
UPa:UCR01708
NADP(+) + pyridoxine = H(+) + NADPH + pyridoxal
1
LR
1
KEGG:R01708
KEGG reaction
METACYC:PYRIDOXINE-4-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:16132
Rhea reaction
1
1
1
1
KEGG:R01711
METACYC:PYRIDOXINE-4-OXIDASE-RXN
RHEA:15036
reaction
UPa:UCR01711
O(2) + pyridoxine = H(2)O(2) + pyridoxal
1
LR
1
KEGG:R01711
KEGG reaction
METACYC:PYRIDOXINE-4-OXIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15036
Rhea reaction
1
1
1
1
KEGG:R01712
METACYC:2.6.1.30-RXN
RHEA:12844
reaction
UPa:UCR01712
pyridoxamine + pyruvate = L-alanine + pyridoxal
1
LR
1
KEGG:R01712
KEGG reaction
METACYC:2.6.1.30-RXN
Rhea
MetaCyc REACTION
RHEA:12844
Rhea reaction
1
1
1
KEGG:R01714
METACYC:CHORISMATE-SYNTHASE-RXN
RHEA:21023
reaction
UPa:UCR01714
5-O-(1-carboxyvinyl)-3-phosphoshikimate = chorismate + phosphate
1
LR
1
KEGG:R01714
KEGG reaction
METACYC:CHORISMATE-SYNTHASE-RXN
Rhea
MetaCyc REACTION
RHEA:21023
Rhea reaction
1
1
KEGG:R01715
METACYC:CHORISMATEMUT-RXN
RHEA:13900
reaction
UPa:UCR01715
chorismate = prephenate
1
LR
1
KEGG:R01715
KEGG reaction
METACYC:CHORISMATEMUT-RXN
Rhea
MetaCyc REACTION
RHEA:13900
Rhea reaction
1
1
KEGG:R01717
METACYC:ISOCHORSYN-RXN
RHEA:18988
reaction
UPa:UCR01717
chorismate = isochorismate
1
LR
1
KEGG:R01717
KEGG reaction
METACYC:ISOCHORSYN-RXN
Rhea
MetaCyc REACTION
RHEA:18988
Rhea reaction
1
1
1
1
1
1
KEGG:R01720
METACYC:RXN-7637
RHEA:12239
reaction
UPa:UCR01720
H(2)O + NADP(+) + nicotinate = 6-hydroxynicotinate + H(+) + NADPH
1
LR
1
KEGG:R01720
KEGG reaction
METACYC:RXN-7637
MetaCyc
MetaCyc REACTION
RHEA:12239
Rhea reaction
1
1
1
1
1
1
1
1
1
KEGG:R01724
METACYC:NICOTINATEPRIBOSYLTRANS-RXN
RHEA:13396
RHEA:36166
reaction
UPa:UCR01724
ADP + diphosphate + nicotinate D-ribonucleotide + phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + ATP + H(+) + H(2)O + nicotinate
1
RL
1
KEGG:R01724
KEGG reaction
METACYC:NICOTINATEPRIBOSYLTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:13396
Rhea reaction
RHEA:36166
Rhea reaction
1
1
1
1
1
1
KEGG:R01728
METACYC:PREPHENATEDEHYDROG-RXN
RHEA:13872
reaction
UPa:UCR01728
NAD(+) + prephenate = (4-hydroxyphenyl)pyruvate + CO(2) + H(+) + NADH
1
LR
1
KEGG:R01728
KEGG reaction
METACYC:PREPHENATEDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:13872
Rhea reaction
1
1
1
1
1
1
KEGG:R01730
METACYC:PREPHENATE-DEHYDROGENASE-NADP+-RXN
RHEA:21643
reaction
UPa:UCR01730
NADP(+) + prephenate = (4-hydroxyphenyl)pyruvate + CO(2) + H(+) + NADPH
1
LR
1
KEGG:R01730
KEGG reaction
METACYC:PREPHENATE-DEHYDROGENASE-NADP+-RXN
Rhea
MetaCyc REACTION
RHEA:21643
Rhea reaction
1
1
1
1
KEGG:R01731
METACYC:PREPHENATE-ASP-TRANSAMINE-RXN
RHEA:20448
reaction
UPa:UCR01731
L-arogenate + oxaloacetate = L-aspartate + prephenate
1
RL
1
KEGG:R01731
KEGG reaction
METACYC:PREPHENATE-ASP-TRANSAMINE-RXN
Rhea
MetaCyc REACTION
RHEA:20448
Rhea reaction
1
1
1
1
KEGG:R01736
METACYC:GLYOXII-RXN
RHEA:25248
reaction
UPa:UCR01736
(R)-S-lactoylglutathione + H(2)O = (R)-lactate + glutathione
1
LR
1
KEGG:R01736
KEGG reaction
METACYC:GLYOXII-RXN
Rhea
MetaCyc REACTION
RHEA:25248
Rhea reaction
1
1
1
1
1
KEGG:R01745
METACYC:RXN0-5289
RHEA:18848
reaction
UPa:UCR01745
D-glycerate + NAD(+) = 2-hydroxy-3-oxopropanoate + H(+) + NADH
1
RL
1
KEGG:R01745
KEGG reaction
METACYC:RXN0-5289
Rhea
MetaCyc REACTION
RHEA:18848
Rhea reaction
1
1
1
1
1
KEGG:R01747
METACYC:RXN0-5289
METACYC:TSA-REDUCT-RXN
RHEA:18844
reaction
UPa:UCR01747
D-glycerate + NADP(+) = 2-hydroxy-3-oxopropanoate + H(+) + NADPH
1
RL
1
KEGG:R01747
KEGG reaction
METACYC:RXN0-5289
MetaCyc
Rhea
MetaCyc REACTION
METACYC:TSA-REDUCT-RXN
MetaCyc
MetaCyc REACTION
RHEA:18844
Rhea reaction
1
1
1
1
1
1
KEGG:R01749
METACYC:1.1.1.92-RXN
RHEA:13156
reaction
UPa:UCR01749
CO(2) + D-glycerate + NAD(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADH
1
RL
1
KEGG:R01749
KEGG reaction
METACYC:1.1.1.92-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:13156
Rhea reaction
1
1
1
1
1
1
KEGG:R01750
METACYC:1.1.1.92-RXN
RHEA:13160
reaction
UPa:UCR01750
CO(2) + D-glycerate + NADP(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADPH
1
RL
1
KEGG:R01750
KEGG reaction
METACYC:1.1.1.92-RXN
Rhea
MetaCyc REACTION
RHEA:13160
Rhea reaction
1
1
1
KEGG:R01751
METACYC:TARTRATE-DECARBOXYLASE-RXN
RHEA:13320
reaction
UPa:UCR01751
L-tartrate = CO(2) + D-glycerate
1
LR
1
KEGG:R01751
KEGG reaction
METACYC:TARTRATE-DECARBOXYLASE-RXN
Rhea
MetaCyc REACTION
RHEA:13320
Rhea reaction
1
1
1
1
1
KEGG:R01757
METACYC:L-ARABINOSE-1-DEHYDROGENASE-RXN
RHEA:17928
reaction
UPa:UCR01757
L-arabinose + NAD(+) = H(+) + L-arabinono-1,4-lactone + NADH
1
LR
1
KEGG:R01757
KEGG reaction
METACYC:L-ARABINOSE-1-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:17928
Rhea reaction
1
1
1
1
1
KEGG:R01758
METACYC:RXN-14102
RHEA:25228
reaction
UPa:UCR01758
L-arabinitol + NAD(+) = H(+) + L-arabinose + NADH
1
RL
1
KEGG:R01758
KEGG reaction
METACYC:RXN-14102
MetaCyc
Rhea
MetaCyc REACTION
RHEA:25228
Rhea reaction
1
1
1
1
1
KEGG:R01759
METACYC:RXN-8772
RHEA:25232
reaction
UPa:UCR01759
L-arabinitol + NADP(+) = H(+) + L-arabinose + NADPH
1
RL
1
KEGG:R01759
KEGG reaction
METACYC:RXN-8772
Rhea
MetaCyc REACTION
RHEA:25232
Rhea reaction
1
1
KEGG:R01761
METACYC:ARABISOM-RXN
RHEA:14824
reaction
UPa:UCR01761
L-arabinose = L-ribulose
1
LR
1
KEGG:R01761
KEGG reaction
METACYC:ARABISOM-RXN
Rhea
MetaCyc REACTION
RHEA:14824
Rhea reaction
1
1
1
KEGG:R01764
METACYC:BENZOYLFORMATE-DECARBOXYLASE-RXN
RHEA:23371
reaction
UPa:UCR01764
phenylglyoxylate = CO(2) + benzaldehyde
1
LR
1
KEGG:R01764
KEGG reaction
METACYC:BENZOYLFORMATE-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23371
Rhea reaction
1
1
1
1
1
1
KEGG:R01768
METACYC:RXN-7682
RHEA:24673
reaction
UPa:UCR01768
H(2)O + NAD(+) + hypoxanthine = H(+) + NADH + xanthine
1
LR
1
KEGG:R01768
KEGG reaction
METACYC:RXN-7682
MetaCyc
MetaCyc REACTION
RHEA:24673
Rhea reaction
1
1
1
1
KEGG:R01771
METACYC:HOMOSERKIN-RXN
RHEA:13988
reaction
UPa:UCR01771
ATP + L-homoserine = ADP + O-phospho-L-homoserine
1
LR
1
KEGG:R01771
KEGG reaction
METACYC:HOMOSERKIN-RXN
Rhea
MetaCyc REACTION
RHEA:13988
Rhea reaction
1
1
1
1
1
KEGG:R01773
RHEA:15760
reaction
UPa:UCR01773
L-homoserine + NAD(+) = H(+) + L-aspartate 4-semialdehyde + NADH
1
RL
1
KEGG:R01773
KEGG reaction
RHEA:15760
Rhea reaction
1
1
1
1
1
KEGG:R01775
METACYC:HOMOSERDEHYDROG-RXN
RHEA:15764
reaction
UPa:UCR01775
L-homoserine + NADP(+) = H(+) + L-aspartate 4-semialdehyde + NADPH
1
RL
1
KEGG:R01775
KEGG reaction
METACYC:HOMOSERDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:15764
Rhea reaction
1
1
1
1
KEGG:R01776
METACYC:HOMOSERINE-O-ACETYLTRANSFERASE-RXN
RHEA:13704
reaction
UPa:UCR01776
L-homoserine + acetyl-CoA = CoA + O-acetyl-L-homoserine
1
LR
1
KEGG:R01776
KEGG reaction
METACYC:HOMOSERINE-O-ACETYLTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:13704
Rhea reaction
1
1
1
1
KEGG:R01777
METACYC:HOMSUCTRAN-RXN
RHEA:22011
reaction
UPa:UCR01777
L-homoserine + succinyl-CoA = CoA + O-succinyl-L-homoserine
1
LR
1
KEGG:R01777
KEGG reaction
METACYC:HOMSUCTRAN-RXN
MetaCyc
MetaCyc REACTION
RHEA:22011
Rhea reaction
1
1
1
KEGG:R01784
METACYC:4.1.2.18-RXN
RHEA:18548
reaction
UPa:UCR01784
2-dehydro-3-deoxy-L-arabinonate = glycolaldehyde + pyruvate
1
LR
1
KEGG:R01784
KEGG reaction
METACYC:4.1.2.18-RXN
Rhea
MetaCyc REACTION
RHEA:18548
Rhea reaction
1
1
1
1
1
KEGG:R01793
METACYC:1.5.1.34-RXN
METACYC:RXN-7909
RHEA:17872
RHEA:32254
reaction
UPa:UCR01793
H(+) + NADH + dihydrobiopterin = NAD(+) + tetrahydrobiopterin
1
LR
1
KEGG:R01793
KEGG reaction
METACYC:1.5.1.34-RXN
MetaCyc
Rhea
MetaCyc REACTION
METACYC:RXN-7909
Rhea
MetaCyc REACTION
RHEA:17872
Rhea reaction
RHEA:32254
Rhea reaction
1
1
1
1
1
KEGG:R01794
RHEA:32250
reaction
UPa:UCR01794
H(+) + NADPH + dihydrobiopterin = NADP(+) + tetrahydrobiopterin
1
LR
1
KEGG:R01794
KEGG reaction
RHEA:32250
Rhea reaction
1
1
1
1
KEGG:R01797
METACYC:CDPDIGLYPYPHOSPHA-RXN
RHEA:15224
reaction
UPa:UCR01797
CDP-diacylglycerol + H(2)O = CMP + phosphatidate
1
LR
1
KEGG:R01797
KEGG reaction
METACYC:CDPDIGLYPYPHOSPHA-RXN
Rhea
MetaCyc REACTION
RHEA:15224
Rhea reaction
1
1
1
1
KEGG:R01799
METACYC:CDPDIGLYSYN-RXN
RHEA:16232
reaction
UPa:UCR01799
CTP + phosphatidate = CDP-diacylglycerol + diphosphate
1
LR
1
KEGG:R01799
KEGG reaction
METACYC:CDPDIGLYSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:16232
Rhea reaction
1
1
1
1
KEGG:R01800
METACYC:PHOSPHASERSYN-RXN
RHEA:16916
reaction
UPa:UCR01800
CDP-diacylglycerol + L-serine = CMP + phosphatidylserine
1
LR
1
KEGG:R01800
KEGG reaction
METACYC:PHOSPHASERSYN-RXN
Rhea
MetaCyc REACTION
RHEA:16916
Rhea reaction
1
1
1
1
KEGG:R01801
METACYC:PHOSPHAGLYPSYN-RXN
RHEA:12596
reaction
UPa:UCR01801
CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + phosphatidylglycerophosphate
1
LR
1
KEGG:R01801
KEGG reaction
METACYC:PHOSPHAGLYPSYN-RXN
Rhea
MetaCyc REACTION
RHEA:12596
Rhea reaction
1
1
1
KEGG:R01811
METACYC:ACNEULY-RXN
RHEA:23299
reaction
UPa:UCR01811
N-acetylneuraminate = N-acetyl-D-mannosamine + pyruvate
1
LR
1
KEGG:R01811
KEGG reaction
METACYC:ACNEULY-RXN
Rhea
MetaCyc REACTION
RHEA:23299
Rhea reaction
1
1
1
1
1
KEGG:R01812
METACYC:1.1.1.253-RXN
RHEA:19512
reaction
UPa:UCR01812
2 NADP(+) + tetrahydrobiopterin = 2 H(+) + 2 NADPH + biopterin
1
RL
1
KEGG:R01812
KEGG reaction
METACYC:1.1.1.253-RXN
Rhea
MetaCyc REACTION
RHEA:19512
Rhea reaction
1
1
1
1
1
KEGG:R01813
METACYC:RXN-8854
RHEA:42503
reaction
UPa:UCR01813
NADP(+) + tetrahydrobiopterin = 6-lactoyl-5,6,7,8-tetrahydropterin + H(+) + NADPH
1
RL
1
KEGG:R01813
KEGG reaction
METACYC:RXN-8854
MetaCyc
MetaCyc REACTION
RHEA:42503
Rhea reaction
1
1
KEGG:R01818
METACYC:PHOSMANMUT-RXN
RHEA:11143
reaction
UPa:UCR01818
D-mannose 6-phosphate = alpha-D-mannose 1-phosphate
1
LR
1
KEGG:R01818
KEGG reaction
METACYC:PHOSMANMUT-RXN
Rhea
MetaCyc REACTION
RHEA:11143
Rhea reaction
1
1
1
1
1
1
KEGG:R01825
METACYC:ERYTH4PDEHYDROG-RXN
RHEA:12059
reaction
UPa:UCR01825
D-erythrose 4-phosphate + H(2)O + NAD(+) = 4-phospho-D-erythronate + H(+) + NADH
1
LR
1
KEGG:R01825
KEGG reaction
METACYC:ERYTH4PDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:12059
Rhea reaction
1
1
1
1
1
KEGG:R01826
METACYC:DAHPSYN-RXN
RHEA:14720
reaction
UPa:UCR01826
D-erythrose 4-phosphate + H(2)O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate
1
LR
1
KEGG:R01826
KEGG reaction
METACYC:DAHPSYN-RXN
Rhea
MetaCyc REACTION
RHEA:14720
Rhea reaction
1
1
1
1
KEGG:R01827
METACYC:TRANSALDOL-RXN
RHEA:17056
reaction
UPa:UCR01827
D-glyceraldehyde 3-phosphate + sedoheptulose 7-phosphate = D-erythrose 4-phosphate + beta-D-fructose 6-phosphate
1
LR
1
KEGG:R01827
KEGG reaction
METACYC:TRANSALDOL-RXN
Rhea
MetaCyc REACTION
RHEA:17056
Rhea reaction
1
1
1
1
KEGG:R01830
METACYC:2TRANSKETO-RXN
RHEA:27629
reaction
UPa:UCR01830
D-glyceraldehyde 3-phosphate + beta-D-fructose 6-phosphate = D-erythrose 4-phosphate + D-xylulose 5-phosphate
1
RL
1
KEGG:R01830
KEGG reaction
METACYC:2TRANSKETO-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:27629
Rhea reaction
1
1
1
1
1
1
KEGG:R01859
METACYC:PROPIONYL-COA-CARBOXY-RXN
RHEA:23723
reaction
UPa:UCR01859
ATP + bicarbonate + propanoyl-CoA = (S)-methylmalonyl-CoA + ADP + phosphate
1
LR
1
KEGG:R01859
KEGG reaction
METACYC:PROPIONYL-COA-CARBOXY-RXN
MetaCyc
MetaCyc REACTION
RHEA:23723
Rhea reaction
1
1
1
1
KEGG:R01867
METACYC:RXN-9929
RHEA:15444
reaction
UPa:UCR01867
(S)-dihydroorotate + fumarate = orotate + succinate
1
LR
1
KEGG:R01867
KEGG reaction
METACYC:RXN-9929
MetaCyc
MetaCyc REACTION
RHEA:15444
Rhea reaction
1
1
1
1
KEGG:R01868
METACYC:DIHYDROOROTATE-DEHYDROGENASE-RXN
RHEA:18076
RHEA:30190
reaction
UPa:UCR01868
(S)-dihydroorotate + Quinone = Hydroquinone + orotate
1
LR
1
KEGG:R01868
KEGG reaction
METACYC:DIHYDROOROTATE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:18076
Rhea reaction
RHEA:30190
Rhea reaction
1
1
1
1
1
KEGG:R01869
METACYC:OROTATE-REDUCTASE-NADH-RXN
RHEA:13516
reaction
UPa:UCR01869
(S)-dihydroorotate + NAD(+) = H(+) + NADH + orotate
1
LR
1
KEGG:R01869
KEGG reaction
METACYC:OROTATE-REDUCTASE-NADH-RXN
Rhea
MetaCyc REACTION
RHEA:13516
Rhea reaction
1
1
1
1
KEGG:R01870
METACYC:OROPRIBTRANS-RXN
RHEA:10383
reaction
UPa:UCR01870
diphosphate + orotidine 5'-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + orotate
1
RL
1
KEGG:R01870
KEGG reaction
METACYC:OROPRIBTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:10383
Rhea reaction
1
1
1
1
1
KEGG:R01872
METACYC:QUINATE-5-DEHYDROGENASE-RXN
METACYC:RXN-7967
RHEA:22367
reaction
UPa:UCR01872
D-quinate + NAD(+) = 3-dehydroquinate + H(+) + NADH
1
LR
1
KEGG:R01872
KEGG reaction
METACYC:QUINATE-5-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
METACYC:RXN-7967
MetaCyc
Rhea
MetaCyc REACTION
RHEA:22367
Rhea reaction
1
1
1
1
KEGG:R01873
METACYC:1.1.99.25-RXN
RHEA:23675
reaction
UPa:UCR01873
D-quinate + pyrroloquinoline quinone = 3-dehydroquinate + pyrroloquinoline quinol
1
LR
1
KEGG:R01873
KEGG reaction
METACYC:1.1.99.25-RXN
MetaCyc
MetaCyc REACTION
RHEA:23675
Rhea reaction
1
1
1
1
KEGG:R01876
METACYC:URPHOS-RXN
RHEA:24391
reaction
UPa:UCR01876
phosphate + uridine = alpha-D-ribose 1-phosphate + uracil
1
LR
1
KEGG:R01876
KEGG reaction
METACYC:URPHOS-RXN
Rhea
MetaCyc REACTION
RHEA:24391
Rhea reaction
1
1
1
1
KEGG:R01878
METACYC:CYTIDEAM2-RXN
RHEA:16072
reaction
UPa:UCR01878
H(2)O + cytidine = NH(3) + uridine
1
LR
1
KEGG:R01878
KEGG reaction
METACYC:CYTIDEAM2-RXN
Rhea
MetaCyc REACTION
RHEA:16072
Rhea reaction
1
1
1
1
KEGG:R01883
METACYC:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN
RHEA:10659
reaction
UPa:UCR01883
S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine
1
LR
1
KEGG:R01883
KEGG reaction
METACYC:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:10659
Rhea reaction
1
1
1
1
KEGG:R01890
METACYC:2.7.7.15-RXN
RHEA:19000
reaction
UPa:UCR01890
CTP + phosphocholine = CDP-choline + diphosphate
1
LR
1
KEGG:R01890
KEGG reaction
METACYC:2.7.7.15-RXN
MetaCyc
MetaCyc REACTION
RHEA:19000
Rhea reaction
1
1
1
1
1
KEGG:R01896
METACYC:D-XYLULOSE-REDUCTASE-RXN
RHEA:20436
reaction
UPa:UCR01896
NAD(+) + xylitol = D-xylulose + H(+) + NADH
1
LR
1
KEGG:R01896
KEGG reaction
METACYC:D-XYLULOSE-REDUCTASE-RXN
Rhea
MetaCyc REACTION
RHEA:20436
Rhea reaction
1
1
1
KEGG:R01900
METACYC:ACONITATEHYDR-RXN
RHEA:22147
reaction
UPa:UCR01900
isocitrate = H(2)O + cis-aconitate
1
RL
2
KEGG:R01900
KEGG reaction
METACYC:ACONITATEHYDR-RXN
Rhea
MetaCyc REACTION
RHEA:22147
Rhea reaction
1
1
1
1
1
KEGG:R01903
METACYC:L-ARABINITOL-4-DEHYDROGENASE-RXN
RHEA:16384
reaction
UPa:UCR01903
L-arabinitol + NAD(+) = H(+) + L-xylulose + NADH
1
LR
1
KEGG:R01903
KEGG reaction
METACYC:L-ARABINITOL-4-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:16384
Rhea reaction
1
1
1
1
1
KEGG:R01904
METACYC:L-XYLULOSE-REDUCTASE-RXN
RHEA:17028
reaction
UPa:UCR01904
NADP(+) + xylitol = H(+) + L-xylulose + NADPH
1
RL
1
KEGG:R01904
KEGG reaction
METACYC:L-XYLULOSE-REDUCTASE-RXN
Rhea
MetaCyc REACTION
RHEA:17028
Rhea reaction
1
1
1
KEGG:R01908
METACYC:OXALYL-COA-DECARBOXYLASE-RXN
RHEA:19336
reaction
UPa:UCR01908
oxalyl-CoA = CO(2) + formyl-CoA
1
LR
1
KEGG:R01908
KEGG reaction
METACYC:OXALYL-COA-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19336
Rhea reaction
1
1
1
1
KEGG:R01909
METACYC:PNKIN-RXN
RHEA:25111
reaction
UPa:UCR01909
ATP + pyridoxine = ADP + pyridoxine 5'-phosphate
1
LR
1
KEGG:R01909
KEGG reaction
METACYC:PNKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:25111
Rhea reaction
1
1
1
1
KEGG:R01911
RHEA:25115
reaction
UPa:UCR01911
phosphate + pyridoxine = H(2)O + pyridoxine 5'-phosphate
1
RL
1
KEGG:R01911
KEGG reaction
RHEA:25115
Rhea reaction
1
1
1
1
1
1
KEGG:R01915
METACYC:SPERMIDINE-DEHYDROGENASE-RXN
RHEA:14276
reaction
UPa:UCR01915
H(2)O + acceptor + spermidine = 1,3-diaminopropane + 4-aminobutanal + reduced acceptor
1
LR
1
KEGG:R01915
KEGG reaction
METACYC:SPERMIDINE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:14276
Rhea reaction
1
1
1
1
KEGG:R01920
METACYC:SPERMIDINESYN-RXN
RHEA:12724
reaction
UPa:UCR01920
S-adenosylmethioninamine + putrescine = S-methyl-5'-thioadenosine + spermidine
1
LR
1
KEGG:R01920
KEGG reaction
METACYC:SPERMIDINESYN-RXN
Rhea
MetaCyc REACTION
RHEA:12724
Rhea reaction
1
1
1
KEGG:R01936
reaction
UPa:UCR01936
2-oxaloglutaric acid = 2-oxoadipate + CO(2)
1
LR
2
KEGG:R01936
KEGG reaction
1
1
1
1
KEGG:R01939
METACYC:2-AMINOADIPATE-AMINOTRANSFERASE-RXN
RHEA:12604
reaction
UPa:UCR01939
2-oxoglutarate + L-alpha-aminoadipate = 2-oxoadipate + L-glutamate
1
1
RL
1
LR
1
KEGG:R01939
KEGG reaction
METACYC:2-AMINOADIPATE-AMINOTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:12604
Rhea reaction
1
1
1
1
KEGG:R01940
RHEA:12191
RHEA:15216
reaction
UPa:UCR01940
2-oxoadipate + Enzyme N6-(lipoyl)lysine = CO(2) + S(8)-glutaryldihydrolipoamide
1
LR
1
KEGG:R01940
KEGG reaction
RHEA:12191
Rhea reaction
RHEA:15216
Rhea reaction
1
1
1
1
1
1
KEGG:R01954
METACYC:ARGSUCCINSYN-RXN
RHEA:10935
reaction
UPa:UCR01954
ATP + L-aspartate + L-citrulline = (N(omega)-L-arginino)succinate + AMP + diphosphate
1
1
LR
1
LR
1
KEGG:R01954
KEGG reaction
METACYC:ARGSUCCINSYN-RXN
Rhea
MetaCyc REACTION
RHEA:10935
Rhea reaction
1
1
1
1
KEGG:R01956
METACYC:2.6.1.7-RXN
RHEA:20967
reaction
UPa:UCR01956
2-oxoglutarate + L-kynurenine = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate
1
LR
1
KEGG:R01956
KEGG reaction
METACYC:2.6.1.7-RXN
MetaCyc
MetaCyc REACTION
RHEA:20967
Rhea reaction
1
1
1
1
KEGG:R01959
METACYC:ARYLFORMAMIDASE-RXN
RHEA:13012
reaction
UPa:UCR01959
H(2)O + N-formyl-N-kynurenine = L-kynurenine + formate
1
LR
1
KEGG:R01959
KEGG reaction
METACYC:ARYLFORMAMIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13012
Rhea reaction
1
1
1
1
1
1
1
KEGG:R01960
METACYC:KYNURENINE-3-MONOOXYGENASE-RXN
RHEA:20548
reaction
UPa:UCR01960
H(+) + L-kynurenine + NADPH + O(2) = 3-hydroxy-L-kynurenine + H(2)O + NADP(+)
1
LR
1
KEGG:R01960
KEGG reaction
METACYC:KYNURENINE-3-MONOOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20548
Rhea reaction
1
1
1
1
1
KEGG:R01978
METACYC:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN
RHEA:10191
reaction
UPa:UCR01978
(S)-3-hydroxy-3-methylglutaryl-CoA + CoA = H(2)O + acetoacetyl-CoA + acetyl-CoA
1
RL
1
KEGG:R01978
KEGG reaction
METACYC:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN
Rhea
MetaCyc REACTION
RHEA:10191
Rhea reaction
1
1
1
KEGG:R01993
METACYC:DIHYDROOROT-RXN
RHEA:24299
reaction
UPa:UCR01993
(S)-dihydroorotate + H(2)O = N-carbamoyl-L-aspartate
1
RL
1
KEGG:R01993
KEGG reaction
METACYC:DIHYDROOROT-RXN
Rhea
MetaCyc REACTION
RHEA:24299
Rhea reaction
1
1
1
1
KEGG:R02003
METACYC:FPPSYN-RXN
RHEA:19364
reaction
UPa:UCR02003
geranyl diphosphate + isopentenyl diphosphate = diphosphate + farnesyl diphosphate
1
LR
1
KEGG:R02003
KEGG reaction
METACYC:FPPSYN-RXN
Rhea
MetaCyc REACTION
RHEA:19364
Rhea reaction
1
1
1
KEGG:R02013
METACYC:4.2.3.16-RXN
RHEA:12872
reaction
UPa:UCR02013
geranyl diphosphate = (4S)-limonene + diphosphate
1
LR
1
KEGG:R02013
KEGG reaction
METACYC:4.2.3.16-RXN
MetaCyc
MetaCyc REACTION
RHEA:12872
Rhea reaction
1
1
1
1
1
KEGG:R02021
METACYC:1.8.4.8-RXN
RHEA:11727
reaction
UPa:UCR02021
3'-phospho-5'-adenylyl sulfate + thioredoxin = adenosine 3',5'-bisphosphate + sulfite + thioredoxin disulfide
1
LR
1
KEGG:R02021
KEGG reaction
METACYC:1.8.4.8-RXN
Rhea
MetaCyc REACTION
RHEA:11727
Rhea reaction
1
1
1
1
KEGG:R02029
METACYC:PGPPHOSPHA-RXN
RHEA:33754
reaction
UPa:UCR02029
H(2)O + phosphatidylglycerophosphate = phosphate + phosphatidylglycerol
1
LR
1
KEGG:R02029
KEGG reaction
METACYC:PGPPHOSPHA-RXN
Rhea
MetaCyc REACTION
RHEA:33754
Rhea reaction
1
1
1
KEGG:R02035
METACYC:6PGLUCONOLACT-RXN
RHEA:12559
reaction
UPa:UCR02035
D-glucono-1,5-lactone 6-phosphate + H(2)O = 6-phospho-D-gluconate
1
LR
1
KEGG:R02035
KEGG reaction
METACYC:6PGLUCONOLACT-RXN
MetaCyc
MetaCyc REACTION
RHEA:12559
Rhea reaction
1
1
1
1
KEGG:R02037
METACYC:2.1.1.103-RXN
RHEA:20368
reaction
UPa:UCR02037
S-adenosyl-L-methionine + phosphoethanolamine = N-methylethanolamine phosphate + S-adenosyl-L-homocysteine
1
LR
1
KEGG:R02037
KEGG reaction
METACYC:2.1.1.103-RXN
MetaCyc
MetaCyc REACTION
RHEA:20368
Rhea reaction
1
1
1
1
KEGG:R02038
METACYC:2.7.7.14-RXN
RHEA:24595
reaction
UPa:UCR02038
CTP + phosphoethanolamine = CDP-ethanolamine + diphosphate
1
LR
1
KEGG:R02038
KEGG reaction
METACYC:2.7.7.14-RXN
MetaCyc
MetaCyc REACTION
RHEA:24595
Rhea reaction
1
1
1
KEGG:R02055
METACYC:PHOSPHASERDECARB-RXN
RHEA:20831
reaction
UPa:UCR02055
phosphatidylserine = CO(2) + phosphatidylethanolamine
1
LR
1
KEGG:R02055
KEGG reaction
METACYC:PHOSPHASERDECARB-RXN
MetaCyc
MetaCyc REACTION
RHEA:20831
Rhea reaction
1
1
1
1
KEGG:R02057
METACYC:ETHANOLAMINEPHOSPHOTRANSFERASE-RXN
RHEA:32946
reaction
UPa:UCR02057
1,2-diacyl-sn-glycerol + CDP-ethanolamine = CMP + phosphatidylethanolamine
1
LR
1
KEGG:R02057
KEGG reaction
METACYC:ETHANOLAMINEPHOSPHOTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:32946
Rhea reaction
1
1
1
1
KEGG:R02058
METACYC:GLUCOSAMINEPNACETYLTRANS-RXN
RHEA:10295
reaction
UPa:UCR02058
acetyl-CoA + alpha-D-glucosamine 6-phosphate = CoA + N-acetyl-D-glucosamine 6-phosphate
1
LR
1
KEGG:R02058
KEGG reaction
METACYC:GLUCOSAMINEPNACETYLTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:10295
Rhea reaction
1
1
1
1
KEGG:R02059
METACYC:NAG6PDEACET-RXN
RHEA:22939
reaction
UPa:UCR02059
H(2)O + N-acetyl-D-glucosamine 6-phosphate = acetate + alpha-D-glucosamine 6-phosphate
1
LR
1
KEGG:R02059
KEGG reaction
METACYC:NAG6PDEACET-RXN
MetaCyc
MetaCyc REACTION
RHEA:22939
Rhea reaction
1
1
KEGG:R02060
METACYC:5.4.2.10-RXN
RHEA:23427
reaction
UPa:UCR02060
alpha-D-glucosamine 1-phosphate = alpha-D-glucosamine 6-phosphate
1
RL
1
KEGG:R02060
KEGG reaction
METACYC:5.4.2.10-RXN
Rhea
MetaCyc REACTION
RHEA:23427
Rhea reaction
1
1
1
1
KEGG:R02061
METACYC:FARNESYLTRANSTRANSFERASE-RXN
RHEA:17656
reaction
UPa:UCR02061
farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate
1
LR
1
KEGG:R02061
KEGG reaction
METACYC:FARNESYLTRANSTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:17656
Rhea reaction
1
1
1
KEGG:R02065
METACYC:2.5.1.32-RXN
RHEA:22299
reaction
UPa:UCR02065
2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate
1
LR
1
KEGG:R02065
KEGG reaction
METACYC:2.5.1.32-RXN
MetaCyc
MetaCyc REACTION
RHEA:22299
Rhea reaction
1
1
1
KEGG:R02080
METACYC:RXN66-221
RHEA:12275
reaction
UPa:UCR02080
L-dopa = CO(2) + dopamine
1
LR
1
KEGG:R02080
KEGG reaction
METACYC:RXN66-221
MetaCyc
MetaCyc REACTION
RHEA:12275
Rhea reaction
1
1
1
1
1
1
KEGG:R02081
METACYC:HYDROXYMETHYLGLUTARYL-COA-REDUCTASE-RXN
RHEA:14836
reaction
UPa:UCR02081
(R)-mevalonate + CoA + 2 NAD(+) = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 H(+) + 2 NADH
1
LR
1
KEGG:R02081
KEGG reaction
METACYC:HYDROXYMETHYLGLUTARYL-COA-REDUCTASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14836
Rhea reaction
1
1
1
1
1
1
KEGG:R02082
METACYC:1.1.1.34-RXN
RHEA:15992
reaction
UPa:UCR02082
(R)-mevalonate + CoA + 2 NADP(+) = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 H(+) + 2 NADPH
1
RL
1
KEGG:R02082
KEGG reaction
METACYC:1.1.1.34-RXN
Rhea
MetaCyc REACTION
RHEA:15992
Rhea reaction
1
1
1
KEGG:R02085
METACYC:METHYLGLUTACONYL-COA-HYDRATASE-RXN
RHEA:21539
reaction
UPa:UCR02085
(S)-3-hydroxy-3-methylglutaryl-CoA = 3-methylglutaconyl-CoA + H(2)O
1
RL
1
KEGG:R02085
KEGG reaction
METACYC:METHYLGLUTACONYL-COA-HYDRATASE-RXN
Rhea
MetaCyc REACTION
RHEA:21539
Rhea reaction
1
1
KEGG:R02087
METACYC:NANE-RXN
RHEA:25260
reaction
UPa:UCR02087
N-acetyl-D-glucosamine 6-phosphate = N-acetyl-D-mannosamine 6-phosphate
1
RL
1
KEGG:R02087
KEGG reaction
METACYC:NANE-RXN
MetaCyc
MetaCyc REACTION
RHEA:25260
Rhea reaction
1
1
1
1
KEGG:R02100
METACYC:DUTP-PYROP-RXN
RHEA:10251
reaction
UPa:UCR02100
H(2)O + dUTP = dUMP + diphosphate
1
LR
1
KEGG:R02100
KEGG reaction
METACYC:DUTP-PYROP-RXN
MetaCyc
MetaCyc REACTION
RHEA:10251
Rhea reaction
1
1
1
1
1
1
KEGG:R02103
METACYC:RXN0-901
RHEA:16672
reaction
UPa:UCR02103
H(2)O + NAD(+) + xanthine = H(+) + NADH + urate
1
LR
1
KEGG:R02103
KEGG reaction
METACYC:RXN0-901
Rhea
MetaCyc REACTION
RHEA:16672
Rhea reaction
1
1
1
1
1
KEGG:R02106
METACYC:URATE-OXIDASE-RXN
RHEA:21371
reaction
UPa:UCR02106
H(2)O + O(2) + urate = 5-hydroxyisouric acid + H(2)O(2)
1
LR
1
KEGG:R02106
KEGG reaction
METACYC:URATE-OXIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:21371
Rhea reaction
1
1
1
1
1
KEGG:R02133
METACYC:THIAMINASE-RXN
RHEA:17512
reaction
UPa:UCR02133
H(2)O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H(+)
1
LR
1
KEGG:R02133
KEGG reaction
METACYC:THIAMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:17512
Rhea reaction
1
1
1
1
KEGG:R02134
METACYC:THIKIN-RXN
RHEA:12015
reaction
UPa:UCR02134
ATP + thiamine = ADP + thiamine phosphate
1
LR
1
KEGG:R02134
KEGG reaction
METACYC:THIKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:12015
Rhea reaction
1
1
1
KEGG:R02139
METACYC:BARBITURASE-RXN
RHEA:18656
reaction
UPa:UCR02139
H(2)O + barbiturate = 3-oxo-3-ureidopropanoic acid
1
LR
1
KEGG:R02139
KEGG reaction
METACYC:BARBITURASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:18656
Rhea reaction
1
1
1
1
KEGG:R02142
METACYC:XANPRIBOSYLTRAN-RXN
RHEA:10803
reaction
UPa:UCR02142
XMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine
1
RL
1
KEGG:R02142
KEGG reaction
METACYC:XANPRIBOSYLTRAN-RXN
MetaCyc
MetaCyc REACTION
RHEA:10803
Rhea reaction
1
1
1
1
KEGG:R02164
METACYC:SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN
RHEA:13716
RHEA:40526
reaction
UPa:UCR02164
Quinone + succinate = Hydroquinone + fumarate
1
LR
1
KEGG:R02164
KEGG reaction
METACYC:SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13716
Rhea reaction
RHEA:40526
Rhea reaction
1
1
1
1
KEGG:R02199
METACYC:BRANCHED-CHAINAMINOTRANSFERILEU-RXN
RHEA:24804
reaction
UPa:UCR02199
2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoate + L-glutamate
1
RL
1
KEGG:R02199
KEGG reaction
METACYC:BRANCHED-CHAINAMINOTRANSFERILEU-RXN
Rhea
MetaCyc REACTION
RHEA:24804
Rhea reaction
1
1
1
1
1
KEGG:R02236
RHEA:31106
reaction
UPa:UCR02236
7,8-dihydrofolate + NADP(+) = H(+) + NADPH + folate
1
RL
1
KEGG:R02236
KEGG reaction
RHEA:31106
Rhea reaction
1
1
1
1
1
1
KEGG:R02237
METACYC:DIHYDROFOLATESYNTH-RXN
RHEA:23587
reaction
UPa:UCR02237
7,8-dihydropteroate + ATP + L-glutamate = 7,8-dihydrofolate + ADP + phosphate
1
LR
1
KEGG:R02237
KEGG reaction
METACYC:DIHYDROFOLATESYNTH-RXN
MetaCyc
MetaCyc REACTION
RHEA:23587
Rhea reaction
1
1
1
1
KEGG:R02241
METACYC:RXN-1623
RHEA:19712
reaction
UPa:UCR02241
CoA + phosphatidate = 1-acyl-sn-glycerol 3-phosphate + acyl-CoA
1
RL
1
KEGG:R02241
KEGG reaction
METACYC:RXN-1623
MetaCyc
MetaCyc REACTION
RHEA:19712
Rhea reaction
1
1
1
1
KEGG:R02245
METACYC:MEVALONATE-KINASE-RXN
RHEA:17068
reaction
UPa:UCR02245
(R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP
1
LR
1
KEGG:R02245
KEGG reaction
METACYC:MEVALONATE-KINASE-RXN
Rhea
MetaCyc REACTION
RHEA:17068
Rhea reaction
1
1
1
1
1
1
1
KEGG:R02253
METACYC:TRANS-CINNAMATE-4-MONOOXYGENASE-RXN
RHEA:10611
reaction
UPa:UCR02253
H(+) + NADPH + O(2) + trans-cinnamate = H(2)O + NADP(+) + trans-4-coumarate
1
LR
1
KEGG:R02253
KEGG reaction
METACYC:TRANS-CINNAMATE-4-MONOOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:10611
Rhea reaction
1
1
1
KEGG:R02262
METACYC:FUCPALDOL-RXN
RHEA:12936
reaction
UPa:UCR02262
L-fuculose 1-phosphate = L-lactaldehyde + glycerone phosphate
1
LR
1
KEGG:R02262
KEGG reaction
METACYC:FUCPALDOL-RXN
Rhea
MetaCyc REACTION
RHEA:12936
Rhea reaction
1
1
1
KEGG:R02263
METACYC:RHAMNULPALDOL-RXN
RHEA:19692
reaction
UPa:UCR02263
L-rhamnulose 1-phosphate = L-lactaldehyde + glycerone phosphate
1
LR
1
KEGG:R02263
KEGG reaction
METACYC:RHAMNULPALDOL-RXN
Rhea
MetaCyc REACTION
RHEA:19692
Rhea reaction
1
1
KEGG:R02272
METACYC:GSAAMINOTRANS-RXN
RHEA:14268
reaction
UPa:UCR02272
5-aminolevulinate = (S)-4-amino-5-oxopentanoic acid
1
RL
1
KEGG:R02272
KEGG reaction
METACYC:GSAAMINOTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:14268
Rhea reaction
1
1
1
1
KEGG:R02274
METACYC:VAGL-RXN
RHEA:10215
reaction
UPa:UCR02274
2-oxoglutarate + 5-aminopentanoate = 5-oxopentanoate + L-glutamate
1
LR
1
KEGG:R02274
KEGG reaction
METACYC:VAGL-RXN
Rhea
MetaCyc REACTION
RHEA:10215
Rhea reaction
1
1
1
1
KEGG:R02276
METACYC:AMVAL-RXN
RHEA:42515
reaction
UPa:UCR02276
5-acetamidopentanoate + H(2)O = 5-aminopentanoate + acetate
1
LR
1
KEGG:R02276
KEGG reaction
METACYC:AMVAL-RXN
MetaCyc
MetaCyc REACTION
RHEA:42515
Rhea reaction
1
1
1
KEGG:R02278
METACYC:4.2.1.43-RXN
RHEA:17204
reaction
UPa:UCR02278
2-dehydro-3-deoxy-L-arabinonate = 2,5-dioxopentanoate + H(2)O
1
LR
1
KEGG:R02278
KEGG reaction
METACYC:4.2.1.43-RXN
MetaCyc
MetaCyc REACTION
RHEA:17204
Rhea reaction
1
1
1
1
KEGG:R02279
METACYC:4.2.1.41-RXN
RHEA:24611
reaction
UPa:UCR02279
5-dehydro-4-deoxy-D-glucarate = 2,5-dioxopentanoate + CO(2) + H(2)O
1
LR
1
KEGG:R02279
KEGG reaction
METACYC:4.2.1.41-RXN
MetaCyc
MetaCyc REACTION
RHEA:24611
Rhea reaction
1
1
1
1
KEGG:R02282
METACYC:GLUTAMATE-N-ACETYLTRANSFERASE-RXN
RHEA:15352
reaction
UPa:UCR02282
L-glutamate + N(2)-acetyl-L-ornithine = L-ornithine + N-acetyl-L-glutamate
1
LR
1
KEGG:R02282
KEGG reaction
METACYC:GLUTAMATE-N-ACETYLTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15352
Rhea reaction
1
1
1
1
KEGG:R02283
METACYC:ACETYLORNTRANSAM-RXN
RHEA:18052
reaction
UPa:UCR02283
2-oxoglutarate + N(2)-acetyl-L-ornithine = L-glutamate + N-acetyl-L-glutamate 5-semialdehyde
1
RL
1
KEGG:R02283
KEGG reaction
METACYC:ACETYLORNTRANSAM-RXN
Rhea
MetaCyc REACTION
RHEA:18052
Rhea reaction
1
1
1
1
KEGG:R02285
METACYC:FORMIMINOGLUTAMASE-RXN
RHEA:22495
reaction
UPa:UCR02285
H(2)O + N-formimidoyl-L-glutamate = L-glutamate + formamide
1
LR
1
KEGG:R02285
KEGG reaction
METACYC:FORMIMINOGLUTAMASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22495
Rhea reaction
1
1
1
1
KEGG:R02286
METACYC:FORMIMINOGLUTAMATE-DEIMINASE-RXN
RHEA:22835
reaction
UPa:UCR02286
H(2)O + N-formimidoyl-L-glutamate = N-formyl-L-glutamate + NH(3)
1
LR
1
KEGG:R02286
KEGG reaction
METACYC:FORMIMINOGLUTAMATE-DEIMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22835
Rhea reaction
1
1
1
1
KEGG:R02287
METACYC:GLUTAMATE-FORMIMINOTRANSFERASE-RXN
RHEA:15100
reaction
UPa:UCR02287
5-formiminotetrahydrofolate + L-glutamate = 5,6,7,8-tetrahydrofolate + N-formimidoyl-L-glutamate
1
RL
1
KEGG:R02287
KEGG reaction
METACYC:GLUTAMATE-FORMIMINOTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15100
Rhea reaction
1
1
1
KEGG:R02288
METACYC:IMIDAZOLONEPROPIONASE-RXN
RHEA:23663
reaction
UPa:UCR02288
4-imidazolone-5-propanoate + H(2)O = N-formimidoyl-L-glutamate
1
LR
1
KEGG:R02288
KEGG reaction
METACYC:IMIDAZOLONEPROPIONASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23663
Rhea reaction
1
1
1
1
1
1
KEGG:R02291
METACYC:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
RHEA:24287
reaction
UPa:UCR02291
L-aspartate 4-semialdehyde + NADP(+) + phosphate = 4-phospho-L-aspartate + H(+) + NADPH
1
1
1
RL
1
RL
1
RL
1
KEGG:R02291
KEGG reaction
METACYC:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:24287
Rhea reaction
1
1
1
KEGG:R02305
METACYC:PENTALENENE-SYNTHASE-RXN
RHEA:18084
reaction
UPa:UCR02305
farnesyl diphosphate = diphosphate + pentalenene
1
LR
1
KEGG:R02305
KEGG reaction
METACYC:PENTALENENE-SYNTHASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:18084
Rhea reaction
1
1
1
KEGG:R02307
METACYC:ARISTOLOCHENE-SYNTHASE-RXN
RHEA:19828
reaction
UPa:UCR02307
farnesyl diphosphate = aristolochene + diphosphate
1
LR
1
KEGG:R02307
KEGG reaction
METACYC:ARISTOLOCHENE-SYNTHASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19828
Rhea reaction
1
1
1
1
1
1
1
KEGG:R02313
METACYC:1.5.1.9-RXN
RHEA:24523
reaction
UPa:UCR02313
H(2)O + NAD(+) + saccharopine = H(+) + L-2-aminoadipate 6-semialdahyde + L-glutamate + NADH
1
LR
1
KEGG:R02313
KEGG reaction
METACYC:1.5.1.9-RXN
MetaCyc
MetaCyc REACTION
RHEA:24523
Rhea reaction
1
1
1
1
1
1
1
KEGG:R02315
METACYC:RXN3O-127
RHEA:10023
reaction
UPa:UCR02315
H(2)O + NADP(+) + saccharopine = H(+) + L-2-aminoadipate 6-semialdahyde + L-glutamate + NADPH
1
RL
1
KEGG:R02315
KEGG reaction
METACYC:RXN3O-127
MetaCyc
MetaCyc REACTION
RHEA:10023
Rhea reaction
1
1
1
1
KEGG:R02325
METACYC:DCTP-DEAM-RXN
RHEA:22683
reaction
UPa:UCR02325
H(2)O + dCTP = NH(3) + dUTP
1
LR
1
KEGG:R02325
KEGG reaction
METACYC:DCTP-DEAM-RXN
MetaCyc
MetaCyc REACTION
RHEA:22683
Rhea reaction
1
1
1
KEGG:R02340
METACYC:RXN0-2381
RHEA:14084
reaction
UPa:UCR02340
indoleglycerol phosphate = D-glyceraldehyde 3-phosphate + indole
1
1
LR
1
LR
1
KEGG:R02340
KEGG reaction
METACYC:RXN0-2381
Rhea
MetaCyc REACTION
RHEA:14084
Rhea reaction
1
1
1
1
KEGG:R02362
METACYC:PECTINESTERASE-RXN
reaction
UPa:UCR02362
n H(2)O + pectin = n methanol + pectate
1
LR
1
KEGG:R02362
KEGG reaction
METACYC:PECTINESTERASE-RXN
MetaCyc
MetaCyc REACTION
1
1
1
1
1
1
KEGG:R02401
METACYC:GLUTARATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
RHEA:12067
reaction
UPa:UCR02401
5-oxopentanoate + H(2)O + NAD(+) = H(+) + NADH + glutarate
1
LR
1
KEGG:R02401
KEGG reaction
METACYC:GLUTARATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12067
Rhea reaction
1
1
1
1
KEGG:R02412
METACYC:SHIKIMATE-KINASE-RXN
RHEA:13124
reaction
UPa:UCR02412
ATP + shikimate = 3-phosphoshikimate + ADP
1
LR
1
KEGG:R02412
KEGG reaction
METACYC:SHIKIMATE-KINASE-RXN
Rhea
MetaCyc REACTION
RHEA:13124
Rhea reaction
1
1
1
1
1
KEGG:R02413
METACYC:SHIKIMATE-5-DEHYDROGENASE-RXN
RHEA:17740
reaction
UPa:UCR02413
NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH
1
RL
1
KEGG:R02413
KEGG reaction
METACYC:SHIKIMATE-5-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:17740
Rhea reaction
1
1
1
1
KEGG:R02422
METACYC:ALLANTOICASE-RXN
RHEA:11019
reaction
UPa:UCR02422
H(2)O + allantoate = (S)-ureidoglycolate + urea
1
LR
1
KEGG:R02422
KEGG reaction
METACYC:ALLANTOICASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:11019
Rhea reaction
1
1
1
1
1
KEGG:R02423
METACYC:ALLANTOATE-DEIMINASE-RXN
RHEA:13596
RHEA:27488
reaction
UPa:UCR02423
H(2)O + allantoate = 2-ureidoglycine + CO(2) + NH(3)
1
LR
1
KEGG:R02423
KEGG reaction
METACYC:ALLANTOATE-DEIMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13596
Rhea reaction
RHEA:27488
Rhea reaction
1
1
1
KEGG:R02425
METACYC:ALLANTOINASE-RXN
RHEA:17032
reaction
UPa:UCR02425
(S)-allantoin + H(2)O = allantoate
1
LR
1
KEGG:R02425
KEGG reaction
METACYC:ALLANTOINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:17032
Rhea reaction
1
1
1
KEGG:R02426
METACYC:CDP-GLUCOSE-46-DEHYDRATASE-RXN
RHEA:17156
reaction
UPa:UCR02426
CDP-glucose = CDP-4-dehydro-6-deoxy-D-glucose + H(2)O
1
LR
1
KEGG:R02426
KEGG reaction
METACYC:CDP-GLUCOSE-46-DEHYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:17156
Rhea reaction
1
1
KEGG:R02437
METACYC:RHAMNISOM-RXN
RHEA:23163
reaction
UPa:UCR02437
L-rhamnose = L-rhamnulose
1
LR
1
KEGG:R02437
KEGG reaction
METACYC:RHAMNISOM-RXN
Rhea
MetaCyc REACTION
RHEA:23163
Rhea reaction
1
1
1
1
KEGG:R02439
METACYC:RXN0-5116
RHEA:22075
reaction
UPa:UCR02439
ATP + L-ribulose = ADP + L-ribulose 5-phosphate
1
LR
1
KEGG:R02439
KEGG reaction
METACYC:RXN0-5116
MetaCyc
MetaCyc REACTION
RHEA:22075
Rhea reaction
1
1
1
KEGG:R02466
METACYC:SULFINOALANINE-DECARBOXYLASE-RXN
RHEA:16880
reaction
UPa:UCR02466
3-sulfino-L-alanine = CO(2) + hypotaurine
1
LR
1
KEGG:R02466
KEGG reaction
METACYC:SULFINOALANINE-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16880
Rhea reaction
1
1
1
KEGG:R02467
METACYC:CYSTEAMINE-DIOXYGENASE-RXN
RHEA:14412
reaction
UPa:UCR02467
2-aminoethanethiol + O(2) = hypotaurine
1
LR
1
KEGG:R02467
KEGG reaction
METACYC:CYSTEAMINE-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14412
Rhea reaction
1
1
1
1
1
KEGG:R02472
METACYC:2-DEHYDROPANTOATE-REDUCT-RXN
RHEA:16236
reaction
UPa:UCR02472
(R)-pantoate + NADP(+) = 2-dehydropantoate + H(+) + NADPH
1
RL
1
KEGG:R02472
KEGG reaction
METACYC:2-DEHYDROPANTOATE-REDUCT-RXN
MetaCyc
MetaCyc REACTION
RHEA:16236
Rhea reaction
1
1
1
1
1
1
KEGG:R02473
METACYC:PANTOATE-BETA-ALANINE-LIG-RXN
RHEA:10915
reaction
UPa:UCR02473
(R)-pantoate + ATP + beta-alanine = (R)-pantothenate + AMP + diphosphate
1
LR
1
KEGG:R02473
KEGG reaction
METACYC:PANTOATE-BETA-ALANINE-LIG-RXN
MetaCyc
MetaCyc REACTION
RHEA:10915
Rhea reaction
1
1
1
1
KEGG:R02493
METACYC:PYRAMKIN-RXN
RHEA:25107
reaction
UPa:UCR02493
ATP + pyridoxamine = ADP + pyridoxamine 5'-phosphate
1
LR
1
KEGG:R02493
KEGG reaction
METACYC:PYRAMKIN-RXN
Rhea
MetaCyc REACTION
RHEA:25107
Rhea reaction
1
1
1
1
KEGG:R02494
RHEA:25138
reaction
UPa:UCR02494
phosphate + pyridoxamine = H(2)O + pyridoxamine 5'-phosphate
1
RL
1
KEGG:R02494
KEGG reaction
RHEA:25138
Rhea reaction
1
1
1
KEGG:R02519
METACYC:HOMOGENTISATE-12-DIOXYGENASE-RXN
RHEA:15452
reaction
UPa:UCR02519
O(2) + homogentisate = 4-maleylacetoacetate
1
LR
1
KEGG:R02519
KEGG reaction
METACYC:HOMOGENTISATE-12-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15452
Rhea reaction
1
1
1
1
KEGG:R02521
METACYC:4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN
RHEA:16192
reaction
UPa:UCR02521
(4-hydroxyphenyl)pyruvate + O(2) = CO(2) + homogentisate
1
LR
1
KEGG:R02521
KEGG reaction
METACYC:4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16192
Rhea reaction
1
1
1
KEGG:R02522
METACYC:L-ARABINONATE-DEHYDRATASE-RXN
RHEA:20971
reaction
UPa:UCR02522
L-arabinonate = 2-dehydro-3-deoxy-L-arabinonate + H(2)O
1
LR
1
KEGG:R02522
KEGG reaction
METACYC:L-ARABINONATE-DEHYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20971
Rhea reaction
1
1
1
KEGG:R02526
METACYC:L-ARABINONOLACTONASE-RXN
RHEA:16220
reaction
UPa:UCR02526
H(2)O + L-arabinono-1,4-lactone = L-arabinonate
1
LR
1
KEGG:R02526
KEGG reaction
METACYC:L-ARABINONOLACTONASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16220
Rhea reaction
1
1
1
KEGG:R02530
METACYC:GLYOXI-RXN
RHEA:19072
reaction
UPa:UCR02530
(R)-S-lactoylglutathione = glutathione + methylglyoxal
1
RL
1
KEGG:R02530
KEGG reaction
METACYC:GLYOXI-RXN
Rhea
MetaCyc REACTION
RHEA:19072
Rhea reaction
1
1
1
1
KEGG:R02533
METACYC:RXN66-241
RHEA:25272
reaction
UPa:UCR02533
(R)-noradrenaline + S-adenosyl-L-methionine = (R)-adrenaline + S-adenosyl-L-homocysteine
1
LR
1
KEGG:R02533
KEGG reaction
METACYC:RXN66-241
MetaCyc
MetaCyc REACTION
RHEA:25272
Rhea reaction
1
1
1
1
1
1
KEGG:R02535
METACYC:DOPAMINE-BETA-MONOOXYGENASE-RXN
RHEA:19120
reaction
UPa:UCR02535
L-ascorbate + O(2) + dopamine = (R)-noradrenaline + H(2)O + L-dehydroascorbate
1
LR
1
KEGG:R02535
KEGG reaction
METACYC:DOPAMINE-BETA-MONOOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19120
Rhea reaction
1
1
1
1
1
1
KEGG:R02536
METACYC:PHENDEHYD-RXN
RHEA:21395
reaction
UPa:UCR02536
H(2)O + NAD(+) + phenylacetaldehyde = H(+) + NADH + phenylacetate
1
LR
1
KEGG:R02536
KEGG reaction
METACYC:PHENDEHYD-RXN
Rhea
MetaCyc REACTION
RHEA:21395
Rhea reaction
1
1
1
1
1
KEGG:R02545
METACYC:RXN-8643
RHEA:16460
reaction
UPa:UCR02545
NAD(+) + meso-tartrate = 2-hydroxy-3-oxosuccinate + H(+) + NADH
1
LR
1
KEGG:R02545
KEGG reaction
METACYC:RXN-8643
Rhea
MetaCyc REACTION
RHEA:16460
Rhea reaction
1
1
1
1
1
1
KEGG:R02549
METACYC:AMINOBUTDEHYDROG-RXN
RHEA:19108
reaction
UPa:UCR02549
4-aminobutanal + H(2)O + NAD(+) = 4-aminobutanoate + H(+) + NADH
1
LR
1
KEGG:R02549
KEGG reaction
METACYC:AMINOBUTDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:19108
Rhea reaction
1
1
1
1
1
KEGG:R02553
METACYC:CYCLOPENTANOL-DEHYDROGENASE-RXN
RHEA:11731
reaction
UPa:UCR02553
NAD(+) + cyclopentanol = H(+) + NADH + cyclopentanone
1
LR
1
KEGG:R02553
KEGG reaction
METACYC:CYCLOPENTANOL-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:11731
Rhea reaction
1
1
1
1
1
1
1
KEGG:R02554
METACYC:CYCLOPENTANONE-MONOOXYGENASE-RXN
RHEA:15740
reaction
UPa:UCR02554
H(+) + NADPH + O(2) + cyclopentanone = 5-valerolactone + H(2)O + NADP(+)
1
LR
1
KEGG:R02554
KEGG reaction
METACYC:CYCLOPENTANONE-MONOOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15740
Rhea reaction
1
1
1
1
1
1
KEGG:R02565
METACYC:BADH-RXN
RHEA:15308
reaction
UPa:UCR02565
H(2)O + NAD(+) + betaine aldehyde = 2 H(+) + NADH + betaine
1
LR
1
KEGG:R02565
KEGG reaction
METACYC:BADH-RXN
Rhea
MetaCyc REACTION
RHEA:15308
Rhea reaction
1
1
1
1
KEGG:R02571
reaction
UPa:UCR02571
Enzyme N6-(dihydrolipoyl)lysine + glutaryl-CoA = CoA + S(8)-glutaryldihydrolipoamide
1
RL
1
KEGG:R02571
KEGG reaction
1
1
1
KEGG:R02601
METACYC:2-OXOPENT-4-ENOATE-HYDRATASE-RXN
RHEA:22583
reaction
UPa:UCR02601
2-hydroxy-2,4-pentadienoate + H(2)O = 4-hydroxy-2-oxopentanoate
1
1
LR
1
LR
1
KEGG:R02601
KEGG reaction
METACYC:2-OXOPENT-4-ENOATE-HYDRATASE-RXN
Rhea
MetaCyc REACTION
RHEA:22583
Rhea reaction
1
1
1
1
KEGG:R02603
METACYC:MHPCHYDROL-RXN
RHEA:24792
reaction
UPa:UCR02603
2-hydroxy-2,4-pentadienoate + succinate = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate + H(2)O
1
RL
1
KEGG:R02603
KEGG reaction
METACYC:MHPCHYDROL-RXN
Rhea
MetaCyc REACTION
RHEA:24792
Rhea reaction
1
1
1
1
KEGG:R02606
METACYC:3.7.1.8-RXN
RHEA:17164
reaction
UPa:UCR02606
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H(2)O = 2-hydroxy-2,4-pentadienoate + benzoate
1
LR
1
KEGG:R02606
KEGG reaction
METACYC:3.7.1.8-RXN
MetaCyc
MetaCyc REACTION
RHEA:17164
Rhea reaction
1
1
1
1
1
1
KEGG:R02613
METACYC:AMINEPHEN-RXN
RHEA:25268
reaction
UPa:UCR02613
2-phenylethylamine + H(2)O + O(2) = H(2)O(2) + NH(3) + phenylacetaldehyde
1
LR
1
KEGG:R02613
KEGG reaction
METACYC:AMINEPHEN-RXN
MetaCyc
MetaCyc REACTION
RHEA:25268
Rhea reaction
1
1
1
1
KEGG:R02649
METACYC:ACETYLGLUTKIN-RXN
RHEA:14632
reaction
UPa:UCR02649
ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate
1
LR
1
KEGG:R02649
KEGG reaction
METACYC:ACETYLGLUTKIN-RXN
Rhea
MetaCyc REACTION
RHEA:14632
Rhea reaction
1
1
1
1
KEGG:R02664
RHEA:42411
reaction
UPa:UCR02664
2-phospho-D-glycerate + ATP = 2,3-bisphospho-D-glycerate + ADP
1
LR
1
KEGG:R02664
KEGG reaction
RHEA:42411
Rhea reaction
1
1
1
KEGG:R02665
METACYC:1.13.11.6-RXN
RHEA:17956
reaction
UPa:UCR02665
3-hydroxyanthranilate + O(2) = 2-amino-3-carboxymuconate semialdehyde
1
LR
1
KEGG:R02665
KEGG reaction
METACYC:1.13.11.6-RXN
MetaCyc
MetaCyc REACTION
RHEA:17956
Rhea reaction
1
1
1
1
KEGG:R02668
METACYC:3-HYDROXY-KYNURENINASE-RXN
RHEA:25146
reaction
UPa:UCR02668
3-hydroxy-L-kynurenine + H(2)O = 3-hydroxyanthranilate + L-alanine
1
LR
1
KEGG:R02668
KEGG reaction
METACYC:3-HYDROXY-KYNURENINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:25146
Rhea reaction
1
1
1
1
1
1
1
KEGG:R02698
RHEA:16684
reaction
UPa:UCR02698
4-hydroxyphenylacetate + H(+) + NADH + O(2) = (3,4-dihydroxyphenyl)acetate + H(2)O + NAD(+)
1
LR
1
KEGG:R02698
KEGG reaction
RHEA:16684
Rhea reaction
1
1
1
KEGG:R02701
METACYC:RXN3DJ-170
RHEA:18536
reaction
UPa:UCR02701
5-hydroxy-L-tryptophan = CO(2) + serotonin
1
LR
1
KEGG:R02701
KEGG reaction
METACYC:RXN3DJ-170
MetaCyc
MetaCyc REACTION
RHEA:18536
Rhea reaction
1
1
1
1
KEGG:R02705
METACYC:NANK-RXN
RHEA:25256
reaction
UPa:UCR02705
ATP + N-acetyl-D-mannosamine = ADP + N-acetyl-D-mannosamine 6-phosphate
1
LR
1
KEGG:R02705
KEGG reaction
METACYC:NANK-RXN
MetaCyc
MetaCyc REACTION
RHEA:25256
Rhea reaction
1
1
1
1
KEGG:R02715
METACYC:1.1.3.37-RXN
RHEA:23759
reaction
UPa:UCR02715
D-arabinono-1,4-lactone + O(2) = H(2)O(2) + dehydro-D-arabinono-1,4-lactone
1
LR
1
KEGG:R02715
KEGG reaction
METACYC:1.1.3.37-RXN
Rhea
MetaCyc REACTION
RHEA:23759
Rhea reaction
1
1
1
1
KEGG:R02733
METACYC:N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN
RHEA:20408
reaction
UPa:UCR02733
H(2)O + N-acetyl-LL-2,6-diaminopimelate = LL-2,6-diaminopimelate + acetate
1
LR
1
KEGG:R02733
KEGG reaction
METACYC:N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20408
Rhea reaction
1
1
1
1
KEGG:R02734
METACYC:SUCCDIAMINOPIMDESUCC-RXN
RHEA:22611
reaction
UPa:UCR02734
H(2)O + N-succinyl-LL-2,6-diaminopimelate = LL-2,6-diaminopimelate + succinate
1
LR
1
KEGG:R02734
KEGG reaction
METACYC:SUCCDIAMINOPIMDESUCC-RXN
Rhea
MetaCyc REACTION
RHEA:22611
Rhea reaction
1
1
KEGG:R02735
METACYC:DIAMINOPIMEPIM-RXN
RHEA:15396
reaction
UPa:UCR02735
LL-2,6-diaminopimelate = DL-2,6-diaminopimelate
1
LR
1
KEGG:R02735
KEGG reaction
METACYC:DIAMINOPIMEPIM-RXN
Rhea
MetaCyc REACTION
RHEA:15396
Rhea reaction
1
1
KEGG:R02749
METACYC:D-PPENTOMUT-RXN
RHEA:25208
RHEA:27661
reaction
UPa:UCR02749
2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-D-ribose 5-phosphate
1
LR
1
KEGG:R02749
KEGG reaction
METACYC:D-PPENTOMUT-RXN
Rhea
MetaCyc REACTION
RHEA:25208
Rhea reaction
RHEA:27661
Rhea reaction
1
1
1
KEGG:R02752
METACYC:GLUCARDEHYDRA-RXN
RHEA:14576
reaction
UPa:UCR02752
D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H(2)O
1
LR
1
KEGG:R02752
KEGG reaction
METACYC:GLUCARDEHYDRA-RXN
MetaCyc
MetaCyc REACTION
RHEA:14576
Rhea reaction
1
1
1
KEGG:R02754
METACYC:KDGALDOL-RXN
RHEA:27729
reaction
UPa:UCR02754
5-dehydro-4-deoxy-D-glucarate = 2-hydroxy-3-oxopropanoate + pyruvate
1
LR
1
KEGG:R02754
KEGG reaction
METACYC:KDGALDOL-RXN
Rhea
MetaCyc REACTION
RHEA:27729
Rhea reaction
1
1
1
1
1
1
1
KEGG:R02755
METACYC:DIAMINOPIMELATE-DEHYDROGENASE-RXN
RHEA:13564
reaction
UPa:UCR02755
DL-2,6-diaminopimelate + H(2)O + NADP(+) = (S)-2-amino-6-oxopimelate + H(+) + NADPH + NH(3)
1
RL
2
KEGG:R02755
KEGG reaction
METACYC:DIAMINOPIMELATE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:13564
Rhea reaction
1
1
KEGG:R02765
METACYC:METHYLMALONYL-COA-EPIM-RXN
RHEA:20556
reaction
UPa:UCR02765
(R)-methylmalonyl-CoA = (S)-methylmalonyl-CoA
1
RL
1
KEGG:R02765
KEGG reaction
METACYC:METHYLMALONYL-COA-EPIM-RXN
Rhea
MetaCyc REACTION
RHEA:20556
Rhea reaction
1
1
1
KEGG:R02782
METACYC:MYO-INOSOSE-2-DEHYDRATASE-RXN
RHEA:14068
reaction
UPa:UCR02782
scyllo-inosose = 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H(2)O
1
LR
1
KEGG:R02782
KEGG reaction
METACYC:MYO-INOSOSE-2-DEHYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14068
Rhea reaction
1
1
1
1
1
1
KEGG:R02804
METACYC:RXN-12130
RHEA:15496
RHEA:43111
reaction
UPa:UCR02804
H(2)O + dinitrogen + 2 ferricytochrome c = 2 H(+) + 2 ferrocytochrome c + nitrous oxide
1
RL
1
KEGG:R02804
KEGG reaction
METACYC:RXN-12130
Rhea
MetaCyc REACTION
RHEA:15496
Rhea reaction
RHEA:43111
Rhea reaction
1
1
1
1
KEGG:R02821
METACYC:2.1.1.5-RXN
RHEA:22339
reaction
UPa:UCR02821
L-homocysteine + betaine = L-methionine + N,N-dimethylglycine
1
1
LR
1
LR
1
KEGG:R02821
KEGG reaction
METACYC:2.1.1.5-RXN
MetaCyc
MetaCyc REACTION
RHEA:22339
Rhea reaction
1
1
1
1
1
KEGG:R02860
METACYC:NICOTINE-DEHYDROGENASE-RXN
RHEA:14772
reaction
UPa:UCR02860
H(2)O + acceptor + nicotine = (S)-6-hydroxynicotine + reduced acceptor
1
LR
1
KEGG:R02860
KEGG reaction
METACYC:NICOTINE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14772
Rhea reaction
1
1
1
1
KEGG:R02864
METACYC:SIROHEME-FERROCHELAT-RXN
RHEA:24363
reaction
UPa:UCR02864
2 H(+) + siroheme = Fe2+ + sirohydrochlorin
1
RL
1
KEGG:R02864
KEGG reaction
METACYC:SIROHEME-FERROCHELAT-RXN
Rhea
MetaCyc REACTION
RHEA:24363
Rhea reaction
1
1
1
1
KEGG:R02869
METACYC:SPERMINE-SYNTHASE-RXN
RHEA:19976
reaction
UPa:UCR02869
S-adenosylmethioninamine + spermidine = S-methyl-5'-thioadenosine + spermine
1
LR
1
KEGG:R02869
KEGG reaction
METACYC:SPERMINE-SYNTHASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19976
Rhea reaction
1
1
1
1
1
1
1
KEGG:R02874
METACYC:SQUALENE-MONOOXYGENASE-RXN
RHEA:25285
reaction
UPa:UCR02874
H(+) + NADPH + O(2) + squalene = (S)-2,3-epoxysqualene + H(2)O + NADP(+)
1
LR
1
KEGG:R02874
KEGG reaction
METACYC:SQUALENE-MONOOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:25285
Rhea reaction
1
1
1
1
KEGG:R02911
METACYC:RXN3DJ-35528
RHEA:25220
reaction
UPa:UCR02911
acetyl-CoA + serotonin = CoA + N-acetylserotonin
1
LR
1
KEGG:R02911
KEGG reaction
METACYC:RXN3DJ-35528
MetaCyc
MetaCyc REACTION
RHEA:25220
Rhea reaction
1
1
1
KEGG:R02914
METACYC:UROCANATE-HYDRATASE-RXN
RHEA:13104
reaction
UPa:UCR02914
4-imidazolone-5-propanoate = H(2)O + trans-urocanate
1
RL
1
KEGG:R02914
KEGG reaction
METACYC:UROCANATE-HYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13104
Rhea reaction
1
1
1
1
KEGG:R02922
METACYC:CREATININE-DEAMINASE-RXN
RHEA:12684
reaction
UPa:UCR02922
H(2)O + creatinine = N-methylhydantoin + NH(3)
1
LR
1
KEGG:R02922
KEGG reaction
METACYC:CREATININE-DEAMINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12684
Rhea reaction
1
1
1
KEGG:R02933
METACYC:RXN-8783
RHEA:42519
reaction
UPa:UCR02933
H(2)O + L-gulono-1,4-lactone = L-gulonate
1
RL
1
KEGG:R02933
KEGG reaction
METACYC:RXN-8783
MetaCyc
MetaCyc REACTION
RHEA:42519
Rhea reaction
1
1
1
1
1
KEGG:R02935
RHEA:15332
reaction
UPa:UCR02935
(S)-ureidoglycolate + NAD(+) = H(+) + NADH + oxalurate
1
LR
1
KEGG:R02935
KEGG reaction
RHEA:15332
Rhea reaction
1
1
1
1
1
KEGG:R02936
METACYC:R165-RXN
RHEA:15336
reaction
UPa:UCR02936
(S)-ureidoglycolate + NADP(+) = H(+) + NADPH + oxalurate
1
LR
1
KEGG:R02936
KEGG reaction
METACYC:R165-RXN
MetaCyc
MetaCyc REACTION
RHEA:15336
Rhea reaction
1
1
1
1
1
KEGG:R02946
METACYC:RR-BUTANEDIOL-DEHYDROGENASE-RXN
RHEA:24343
reaction
UPa:UCR02946
(R,R)-butane-2,3-diol + NAD(+) = (R)-acetoin + H(+) + NADH
1
RL
1
KEGG:R02946
KEGG reaction
METACYC:RR-BUTANEDIOL-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:24343
Rhea reaction
1
1
1
KEGG:R02948
METACYC:ACETOLACTATE-DECARBOXYLASE-RXN
RHEA:21583
reaction
UPa:UCR02948
(S)-2-acetolactate = (R)-acetoin + CO(2)
1
LR
1
KEGG:R02948
KEGG reaction
METACYC:ACETOLACTATE-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:21583
Rhea reaction
1
1
1
1
1
KEGG:R02988
RHEA:16984
reaction
UPa:UCR02988
3-oxoadipate + NAD(+) = H(+) + NADH + maleylacetate
1
RL
1
KEGG:R02988
KEGG reaction
RHEA:16984
Rhea reaction
1
1
1
1
1
KEGG:R02989
METACYC:MALEYLACETATE-REDUCTASE-RXN
RHEA:16988
reaction
UPa:UCR02989
3-oxoadipate + NADP(+) = H(+) + NADPH + maleylacetate
1
RL
1
KEGG:R02989
KEGG reaction
METACYC:MALEYLACETATE-REDUCTASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16988
Rhea reaction
1
1
1
1
KEGG:R02990
METACYC:3-OXOADIPATE-COA-TRANSFERASE-RXN
RHEA:12051
reaction
UPa:UCR02990
3-oxoadipate + succinyl-CoA = 3-oxoadipyl-CoA + succinate
1
LR
1
KEGG:R02990
KEGG reaction
METACYC:3-OXOADIPATE-COA-TRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12051
Rhea reaction
1
1
1
KEGG:R02991
METACYC:3-OXOADIPATE-ENOL-LACTONASE-RXN
RHEA:10187
reaction
UPa:UCR02991
5-oxo-4,5-dihydro-2-furylacetate + H(2)O = 3-oxoadipate
1
LR
1
KEGG:R02991
KEGG reaction
METACYC:3-OXOADIPATE-ENOL-LACTONASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:10187
Rhea reaction
1
1
1
KEGG:R02992
METACYC:4-PYRIDOXOLACTONASE-RXN
RHEA:14304
reaction
UPa:UCR02992
4-pyridoxolactone + H(2)O = 4-pyridoxate
1
LR
1
KEGG:R02992
KEGG reaction
METACYC:4-PYRIDOXOLACTONASE-RXN
Rhea
MetaCyc REACTION
RHEA:14304
Rhea reaction
1
1
1
1
KEGG:R03005
METACYC:NICONUCADENYLYLTRAN-RXN
RHEA:22863
reaction
UPa:UCR03005
ATP + nicotinate D-ribonucleotide = deamido-NAD(+) + diphosphate
1
LR
1
KEGG:R03005
KEGG reaction
METACYC:NICONUCADENYLYLTRAN-RXN
MetaCyc
MetaCyc REACTION
RHEA:22863
Rhea reaction
1
1
1
1
KEGG:R03013
METACYC:HISTIDPHOS-RXN
RHEA:14468
reaction
UPa:UCR03013
H(2)O + L-histidinol phosphate = L-histidinol + phosphate
1
LR
1
KEGG:R03013
KEGG reaction
METACYC:HISTIDPHOS-RXN
MetaCyc
MetaCyc REACTION
RHEA:14468
Rhea reaction
1
1
1
1
KEGG:R03014
METACYC:RHAMNULOKIN-RXN
RHEA:20120
reaction
UPa:UCR03014
ATP + L-rhamnulose = ADP + L-rhamnulose 1-phosphate
1
LR
1
KEGG:R03014
KEGG reaction
METACYC:RHAMNULOKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:20120
Rhea reaction
1
1
1
1
1
1
KEGG:R03015
METACYC:FORMYLMETHANOFURAN-DEHYDROGENASE-RXN
RHEA:19844
reaction
UPa:UCR03015
H(2)O + N-formylmethanofuran + acceptor = CO(2) + methanofuran + reduced acceptor
1
RL
1
KEGG:R03015
KEGG reaction
METACYC:FORMYLMETHANOFURAN-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:19844
Rhea reaction
1
1
1
1
KEGG:R03018
METACYC:PANTOTHENATE-KIN-RXN
RHEA:16376
reaction
UPa:UCR03018
(R)-pantothenate + ATP = (R)-4'-phosphopantothenate + ADP
1
LR
1
KEGG:R03018
KEGG reaction
METACYC:PANTOTHENATE-KIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:16376
Rhea reaction
1
1
1
KEGG:R03028
METACYC:GLUTACONYL-COA-DECARBOXYLASE-RXN
RHEA:23975
reaction
UPa:UCR03028
glutaconyl-1-CoA = CO(2) + crotonoyl-CoA
1
LR
1
KEGG:R03028
KEGG reaction
METACYC:GLUTACONYL-COA-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23975
Rhea reaction
1
1
1
KEGG:R03033
METACYC:GALACTONDEHYDRAT-RXN
RHEA:18652
reaction
UPa:UCR03033
D-galactonate = 2-dehydro-3-deoxy-D-galactonate + H(2)O
1
LR
1
KEGG:R03033
KEGG reaction
METACYC:GALACTONDEHYDRAT-RXN
MetaCyc
MetaCyc REACTION
RHEA:18652
Rhea reaction
1
1
1
1
KEGG:R03035
METACYC:PANTEPADENYLYLTRAN-RXN
RHEA:19804
reaction
UPa:UCR03035
ATP + pantotheine 4'-phosphate = 3'-dephospho-CoA + diphosphate
1
LR
1
KEGG:R03035
KEGG reaction
METACYC:PANTEPADENYLYLTRAN-RXN
Rhea
MetaCyc REACTION
RHEA:19804
Rhea reaction
1
1
1
1
KEGG:R03067
METACYC:H2PTEROATESYNTH-RXN
RHEA:19952
reaction
UPa:UCR03067
2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = 7,8-dihydropteroate + diphosphate
1
LR
1
KEGG:R03067
KEGG reaction
METACYC:H2PTEROATESYNTH-RXN
MetaCyc
MetaCyc REACTION
RHEA:19952
Rhea reaction
1
1
1
KEGG:R03069
METACYC:DIMETHYLMALEATE-HYDRATASE-RXN
RHEA:20256
reaction
UPa:UCR03069
H(2)O + dimethylmaleate = (2R,3S)-2,3-dimethylmalate
1
LR
1
KEGG:R03069
KEGG reaction
METACYC:DIMETHYLMALEATE-HYDRATASE-RXN
Rhea
MetaCyc REACTION
RHEA:20256
Rhea reaction
1
1
KEGG:R03070
METACYC:METHYLITACONATE-DELTA-ISOMERASE-RXN
RHEA:23483
reaction
UPa:UCR03070
2-methylene-3-methylsuccinate = dimethylmaleate
1
LR
1
KEGG:R03070
KEGG reaction
METACYC:METHYLITACONATE-DELTA-ISOMERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23483
Rhea reaction
1
1
1
KEGG:R03083
METACYC:3-DEHYDROQUINATE-SYNTHASE-RXN
RHEA:21971
reaction
UPa:UCR03083
7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-dehydroquinate + phosphate
1
LR
1
KEGG:R03083
KEGG reaction
METACYC:3-DEHYDROQUINATE-SYNTHASE-RXN
Rhea
MetaCyc REACTION
RHEA:21971
Rhea reaction
1
1
1
KEGG:R03084
METACYC:3-DEHYDROQUINATE-DEHYDRATASE-RXN
RHEA:21099
reaction
UPa:UCR03084
3-dehydroquinate = 3-dehydroshikimate + H(2)O
1
1
LR
1
LR
1
KEGG:R03084
KEGG reaction
METACYC:3-DEHYDROQUINATE-DEHYDRATASE-RXN
Rhea
MetaCyc REACTION
RHEA:21099
Rhea reaction
1
1
1
1
KEGG:R03098
reaction
UPa:UCR03098
ATP + L-alpha-aminoadipate = alpha-aminoadipoyl-C6-AMP + diphosphate
1
LR
1
KEGG:R03098
KEGG reaction
1
1
1
1
1
1
KEGG:R03102
METACYC:ALLYSINE-DEHYDROG-RXN
RHEA:12311
reaction
UPa:UCR03102
H(2)O + L-2-aminoadipate 6-semialdahyde + NAD(+) = H(+) + L-alpha-aminoadipate + NADH
1
LR
1
KEGG:R03102
KEGG reaction
METACYC:ALLYSINE-DEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:12311
Rhea reaction
1
1
1
1
1
1
KEGG:R03103
METACYC:1.2.1.31-RXN
RHEA:12307
reaction
UPa:UCR03103
H(2)O + L-2-aminoadipate 6-semialdahyde + NADP(+) = H(+) + L-alpha-aminoadipate + NADPH
1
LR
1
KEGG:R03103
KEGG reaction
METACYC:1.2.1.31-RXN
MetaCyc
MetaCyc REACTION
RHEA:12307
Rhea reaction
1
1
1
1
1
KEGG:R03119
METACYC:13-PROPANEDIOL-DEHYDROGENASE-RXN
RHEA:23191
reaction
UPa:UCR03119
NAD(+) + propane-1,3-diol = 3-hydroxypropanal + H(+) + NADH
1
RL
1
KEGG:R03119
KEGG reaction
METACYC:13-PROPANEDIOL-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:23191
Rhea reaction
1
1
1
1
KEGG:R03130
METACYC:ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN
RHEA:15576
reaction
UPa:UCR03130
N-acetylserotonin + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + melatonin
1
LR
1
KEGG:R03130
KEGG reaction
METACYC:ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15576
Rhea reaction
1
1
KEGG:R03163
METACYC:FUCISOM-RXN
RHEA:17236
reaction
UPa:UCR03163
L-fucose = L-fuculose
1
LR
1
KEGG:R03163
KEGG reaction
METACYC:FUCISOM-RXN
Rhea
MetaCyc REACTION
RHEA:17236
Rhea reaction
1
1
1
1
KEGG:R03164
METACYC:6-HYDROXYNICOTINATE-REDUCTASE-RXN
RHEA:17228
reaction
UPa:UCR03164
6-hydroxynicotinate + reduced ferredoxin = 6-hydroxynicotinate + oxidized ferredoxin
1
LR
1
KEGG:R03164
KEGG reaction
METACYC:6-HYDROXYNICOTINATE-REDUCTASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:17228
Rhea reaction
1
1
1
KEGG:R03165
METACYC:UROGENIIISYN-RXN
RHEA:18968
reaction
UPa:UCR03165
hydroxymethylbilane = H(2)O + uroporphyrinogen III
1
LR
1
KEGG:R03165
KEGG reaction
METACYC:UROGENIIISYN-RXN
Rhea
MetaCyc REACTION
RHEA:18968
Rhea reaction
1
1
KEGG:R03181
METACYC:MALEYLACETOACETATE-ISOMERASE-RXN
RHEA:14820
reaction
UPa:UCR03181
4-maleylacetoacetate = 4-fumarylacetoacetate
1
LR
1
KEGG:R03181
KEGG reaction
METACYC:MALEYLACETOACETATE-ISOMERASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14820
Rhea reaction
1
1
1
1
1
1
KEGG:R03182
METACYC:DETHIOBIOTIN-SYN-RXN
RHEA:15808
reaction
UPa:UCR03182
7,8-diaminononanoate + ATP + CO(2) = ADP + dethiobiotin + phosphate
1
LR
1
KEGG:R03182
KEGG reaction
METACYC:DETHIOBIOTIN-SYN-RXN
Rhea
MetaCyc REACTION
RHEA:15808
Rhea reaction
1
1
1
1
KEGG:R03184
METACYC:L-GULONOLACTONE-OXIDASE-RXN
RHEA:12355
reaction
UPa:UCR03184
L-gulono-1,4-lactone + O(2) = H(2)O(2) + L-xylo-hexulonolactone
1
LR
1
KEGG:R03184
KEGG reaction
METACYC:L-GULONOLACTONE-OXIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12355
Rhea reaction
1
1
1
1
1
1
KEGG:R03187
METACYC:3.5.2.14-RXN
RHEA:11723
reaction
UPa:UCR03187
ATP + 2 H(2)O + N-methylhydantoin = ADP + N-carbamoylsarcosine + phosphate
1
LR
1
KEGG:R03187
KEGG reaction
METACYC:3.5.2.14-RXN
MetaCyc
MetaCyc REACTION
RHEA:11723
Rhea reaction
1
1
1
1
KEGG:R03194
reaction
UPa:UCR03194
2 S-adenosyl-L-methionine + uroporphyrinogen III = 2 S-adenosyl-L-homocysteine + precorrin-2
1
LR
1
KEGG:R03194
KEGG reaction
1
1
1
KEGG:R03197
METACYC:UROGENDECARBOX-RXN
RHEA:19868
reaction
UPa:UCR03197
uroporphyrinogen III = 4 CO(2) + coproporphyrinogen-III
1
LR
1
KEGG:R03197
KEGG reaction
METACYC:UROGENDECARBOX-RXN
MetaCyc
MetaCyc REACTION
RHEA:19868
Rhea reaction
1
1
KEGG:R03199
METACYC:LANOSTEROL-SYNTHASE-RXN
RHEA:14624
reaction
UPa:UCR03199
(S)-2,3-epoxysqualene = lanosterol
1
LR
1
KEGG:R03199
KEGG reaction
METACYC:LANOSTEROL-SYNTHASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14624
Rhea reaction
1
1
1
1
1
KEGG:R03202
METACYC:S-6-HYDROXYNICOTINE-OXIDASE-RXN
RHEA:11883
reaction
UPa:UCR03202
(S)-6-hydroxynicotine + H(2)O + O(2) = 6-hydroxypseudooxynicotine + H(2)O(2)
1
LR
1
KEGG:R03202
KEGG reaction
METACYC:S-6-HYDROXYNICOTINE-OXIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:11883
Rhea reaction
1
1
1
1
1
1
KEGG:R03209
METACYC:6-CARBOXYHEXANOATE--COA-LIGASE-RXN
RHEA:14784
reaction
UPa:UCR03209
ATP + CoA + pimelate = AMP + diphosphate + pimeloyl-CoA
1
LR
1
KEGG:R03209
KEGG reaction
METACYC:6-CARBOXYHEXANOATE--COA-LIGASE-RXN
Rhea
MetaCyc REACTION
RHEA:14784
Rhea reaction
1
1
1
1
1
KEGG:R03210
METACYC:7KAPSYN-RXN
RHEA:20715
RHEA:42291
reaction
UPa:UCR03210
L-alanine + pimeloyl-CoA = 8-amino-7-oxononanoate + CO(2) + CoA
1
LR
1
KEGG:R03210
KEGG reaction
METACYC:7KAPSYN-RXN
Rhea
MetaCyc REACTION
RHEA:20715
Rhea reaction
RHEA:42291
Rhea reaction
1
1
1
1
KEGG:R03217
METACYC:RXN-721
RHEA:30934
reaction
UPa:UCR03217
L-cysteine + O-acetyl-L-homoserine = L-cystathionine + acetate
1
LR
1
KEGG:R03217
KEGG reaction
METACYC:RXN-721
Rhea
MetaCyc REACTION
RHEA:30934
Rhea reaction
1
1
1
1
1
KEGG:R03220
METACYC:RXN0-1461
RHEA:18260
reaction
UPa:UCR03220
O(2) + coproporphyrinogen-III = 2 CO(2) + 2 H(2)O + protoporphyrinogen-IX
1
LR
1
KEGG:R03220
KEGG reaction
METACYC:RXN0-1461
MetaCyc
MetaCyc REACTION
RHEA:18260
Rhea reaction
1
1
1
1
KEGG:R03222
METACYC:PROTOPORGENOXI-RXN
RHEA:25579
reaction
UPa:UCR03222
3 O(2) + protoporphyrinogen-IX = 3 H(2)O(2) + protoporphyrin-IX
1
LR
1
KEGG:R03222
KEGG reaction
METACYC:PROTOPORGENOXI-RXN
MetaCyc
MetaCyc REACTION
RHEA:25579
Rhea reaction
1
1
1
1
KEGG:R03223
METACYC:THI-P-SYN-RXN
RHEA:22331
reaction
UPa:UCR03223
4-amino-2-methyl-5-diphosphomethylpyrimidine + 4-methyl-5-(2-phosphoethyl)-thiazole = diphosphate + thiamine phosphate
1
LR
1
KEGG:R03223
KEGG reaction
METACYC:THI-P-SYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:22331
Rhea reaction
1
1
1
1
KEGG:R03230
METACYC:2.3.1.107-RXN
RHEA:24499
reaction
UPa:UCR03230
acetyl-CoA + deacetylvindoline = CoA + vindoline
1
LR
1
KEGG:R03230
KEGG reaction
METACYC:2.3.1.107-RXN
MetaCyc
MetaCyc REACTION
RHEA:24499
Rhea reaction
1
1
1
1
KEGG:R03231
METACYC:DAPASYN-RXN
RHEA:16864
reaction
UPa:UCR03231
8-amino-7-oxononanoate + S-adenosyl-L-methionine = 7,8-diaminononanoate + S-adenosyl-4-methylthio-2-oxobutanoic acid
1
LR
1
KEGG:R03231
KEGG reaction
METACYC:DAPASYN-RXN
Rhea
MetaCyc REACTION
RHEA:16864
Rhea reaction
1
1
1
1
KEGG:R03236
METACYC:TAGAKIN-RXN
RHEA:12423
reaction
UPa:UCR03236
ATP + D-tagatose 6-phosphate = ADP + D-tagatose 1,6-bisphosphate
1
LR
1
KEGG:R03236
KEGG reaction
METACYC:TAGAKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:12423
Rhea reaction
1
1
KEGG:R03240
METACYC:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN
RHEA:13036
reaction
UPa:UCR03240
D-galactose 6-phosphate = D-tagatose 6-phosphate
1
LR
1
KEGG:R03240
KEGG reaction
METACYC:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN
Rhea
MetaCyc REACTION
RHEA:13036
Rhea reaction
1
1
1
1
KEGG:R03241
METACYC:FUCULOKIN-RXN
RHEA:12379
reaction
UPa:UCR03241
ATP + L-fuculose = ADP + L-fuculose 1-phosphate
1
LR
1
KEGG:R03241
KEGG reaction
METACYC:FUCULOKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:12379
Rhea reaction
1
1
1
1
KEGG:R03243
METACYC:HISTAMINOTRANS-RXN
RHEA:23747
reaction
UPa:UCR03243
2-oxoglutarate + L-histidinol phosphate = L-glutamate + imidazole-acetol phosphate
1
RL
1
KEGG:R03243
KEGG reaction
METACYC:HISTAMINOTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:23747
Rhea reaction
1
1
KEGG:R03244
METACYC:LXULRU5P-RXN
RHEA:18500
reaction
UPa:UCR03244
L-ribulose 5-phosphate = L-xylulose 5-phosphate
1
RL
1
KEGG:R03244
KEGG reaction
METACYC:LXULRU5P-RXN
MetaCyc
MetaCyc REACTION
RHEA:18500
Rhea reaction
1
1
1
1
KEGG:R03245
METACYC:PHOSPHOMEVALONATE-KINASE-RXN
RHEA:16344
reaction
UPa:UCR03245
(R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP
1
LR
1
KEGG:R03245
KEGG reaction
METACYC:PHOSPHOMEVALONATE-KINASE-RXN
Rhea
MetaCyc REACTION
RHEA:16344
Rhea reaction
1
1
1
1
1
KEGG:R03254
METACYC:KDO-8PSYNTH-RXN
RHEA:14056
reaction
UPa:UCR03254
8-phospho-3-deoxy-D-manno-octulosonate + phosphate = D-arabinose 5-phosphate + H(2)O + phosphoenolpyruvate
1
RL
1
KEGG:R03254
KEGG reaction
METACYC:KDO-8PSYNTH-RXN
MetaCyc
MetaCyc REACTION
RHEA:14056
Rhea reaction
1
1
1
1
KEGG:R03256
METACYC:LACTOSE6P-HYDROXY-RXN
RHEA:42407
reaction
UPa:UCR03256
H(2)O + lactose 6-phosphate = D-galactose 6-phosphate + beta-D-glucose
1
LR
1
KEGG:R03256
KEGG reaction
METACYC:LACTOSE6P-HYDROXY-RXN
MetaCyc
MetaCyc REACTION
RHEA:42407
Rhea reaction
1
1
1
1
KEGG:R03260
METACYC:O-SUCCHOMOSERLYASE-RXN
RHEA:20400
reaction
UPa:UCR03260
L-cysteine + O-succinyl-L-homoserine = L-cystathionine + succinate
1
LR
1
KEGG:R03260
KEGG reaction
METACYC:O-SUCCHOMOSERLYASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:20400
Rhea reaction
1
1
1
KEGG:R03269
METACYC:P-PANTOCYSDECARB-RXN
RHEA:16796
reaction
UPa:UCR03269
N-[(R)-4-phosphonopantothenoyl]-L-cysteine = CO(2) + pantotheine 4'-phosphate
1
LR
1
KEGG:R03269
KEGG reaction
METACYC:P-PANTOCYSDECARB-RXN
MetaCyc
MetaCyc REACTION
RHEA:16796
Rhea reaction
1
1
1
1
1
KEGG:R03298
RHEA:42415
reaction
UPa:UCR03298
2,3-bisphospho-D-glycerate + ATP = ADP + cyclic 2,3-diphosphoglycerate + phosphate
1
LR
1
KEGG:R03298
KEGG reaction
RHEA:42415
Rhea reaction
1
1
1
KEGG:R03303
METACYC:1.13.11.15-RXN
RHEA:15636
reaction
UPa:UCR03303
(3,4-dihydroxyphenyl)acetate + O(2) = 5-carboxymethyl-2-hydroxymuconate semialdehyde
1
LR
1
KEGG:R03303
KEGG reaction
METACYC:1.13.11.15-RXN
MetaCyc
MetaCyc REACTION
RHEA:15636
Rhea reaction
1
1
KEGG:R03307
METACYC:5.5.1.2-RXN
RHEA:23659
reaction
UPa:UCR03307
2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 3-carboxy-cis,cis-muconate
1
RL
1
KEGG:R03307
KEGG reaction
METACYC:5.5.1.2-RXN
MetaCyc
MetaCyc REACTION
RHEA:23659
Rhea reaction
1
1
KEGG:R03308
METACYC:CARBOXY-CISCIS-MUCONATE-CYCLASE-RXN
RHEA:14980
reaction
UPa:UCR03308
3-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 3-carboxy-cis,cis-muconate
1
LR
1
KEGG:R03308
KEGG reaction
METACYC:CARBOXY-CISCIS-MUCONATE-CYCLASE-RXN
Rhea
MetaCyc REACTION
RHEA:14980
Rhea reaction
1
1
1
1
1
1
KEGG:R03313
METACYC:GLUTSEMIALDEHYDROG-RXN
RHEA:19544
reaction
UPa:UCR03313
L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + L-glutamyl 5-phosphate + NADPH
1
RL
1
KEGG:R03313
KEGG reaction
METACYC:GLUTSEMIALDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:19544
Rhea reaction
1
1
1
KEGG:R03314
METACYC:SPONTPRO-RXN
RHEA:28237
reaction
UPa:UCR03314
L-glutamate 5-semialdehyde = (S)-1-pyrroline-5-carboxylic acid + H(2)O
1
LR
1
KEGG:R03314
KEGG reaction
METACYC:SPONTPRO-RXN
Rhea
MetaCyc REACTION
RHEA:28237
Rhea reaction
1
1
1
1
1
KEGG:R03348
METACYC:QUINOPRIBOTRANS-RXN
RHEA:12736
reaction
UPa:UCR03348
CO(2) + diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + quinolinate
1
RL
1
KEGG:R03348
KEGG reaction
METACYC:QUINOPRIBOTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:12736
Rhea reaction
1
1
1
1
KEGG:R03350
METACYC:KDO-8PPHOSPHAT-RXN
RHEA:11503
reaction
UPa:UCR03350
8-phospho-3-deoxy-D-manno-octulosonate + H(2)O = 3-deoxy-D-manno-octulosonate + phosphate
1
LR
1
KEGG:R03350
KEGG reaction
METACYC:KDO-8PPHOSPHAT-RXN
MetaCyc
MetaCyc REACTION
RHEA:11503
Rhea reaction
1
1
1
1
KEGG:R03351
METACYC:CPM-KDOSYNTH-RXN
RHEA:23451
reaction
UPa:UCR03351
3-deoxy-D-manno-octulosonate + CTP = CMP-3-deoxy-D-manno-octulosonate + diphosphate
1
LR
1
KEGG:R03351
KEGG reaction
METACYC:CPM-KDOSYNTH-RXN
MetaCyc
MetaCyc REACTION
RHEA:23451
Rhea reaction
1
1
1
1
KEGG:R03387
METACYC:DEHYDDEOXGALACTKIN-RXN
RHEA:16528
reaction
UPa:UCR03387
2-dehydro-3-deoxy-D-galactonate + ATP = 6-phospho-2-dehydro-3-deoxy-D-galactonic acid + ADP
1
LR
1
KEGG:R03387
KEGG reaction
METACYC:DEHYDDEOXGALACTKIN-RXN
MetaCyc
MetaCyc REACTION
RHEA:16528
Rhea reaction
1
1
1
1
KEGG:R03390
METACYC:2.3.1.101-RXN
RHEA:18064
reaction
UPa:UCR03390
5,6,7,8-tetrahydromethanopterin + N-formylmethanofuran = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + methanofuran
1
1
LR
1
RL
1
KEGG:R03390
KEGG reaction
METACYC:2.3.1.101-RXN
MetaCyc
MetaCyc REACTION
RHEA:18064
Rhea reaction
1
1
1
1
1
1
KEGG:R03391
RHEA:19656
reaction
UPa:UCR03391
CDP-4-dehydro-3,6-dideoxy-D-glucose + H(2)O + NAD(+) = CDP-4-dehydro-6-deoxy-D-glucose + H(+) + NADH
1
RL
1
KEGG:R03391
KEGG reaction
RHEA:19656
Rhea reaction
1
1
1
1
1
1
KEGG:R03392
METACYC:1.17.1.1-RXN
RHEA:19660
reaction
UPa:UCR03392
CDP-4-dehydro-3,6-dideoxy-D-glucose + H(2)O + NADP(+) = CDP-4-dehydro-6-deoxy-D-glucose + H(+) + NADPH
1
RL
1
KEGG:R03392
KEGG reaction
METACYC:1.17.1.1-RXN
MetaCyc
MetaCyc REACTION
RHEA:19660
Rhea reaction
1
1
1
1
KEGG:R03409
METACYC:PPPGPPHYDRO-RXN
RHEA:13076
reaction
UPa:UCR03409
H(2)O + guanosine 3'-diphosphate 5'-triphosphate = phosphate + ppGpp
1
LR
1
KEGG:R03409
KEGG reaction
METACYC:PPPGPPHYDRO-RXN
MetaCyc
MetaCyc REACTION
RHEA:13076
Rhea reaction
1
1
1
1
KEGG:R03418
METACYC:2.4.1.67-RXN
RHEA:20779
reaction
UPa:UCR03418
1-alpha-D-galactosyl-myo-inositol + raffinose = myo-inositol + stachyose
1
LR
1
KEGG:R03418
KEGG reaction
METACYC:2.4.1.67-RXN
Rhea
MetaCyc REACTION
RHEA:20779
Rhea reaction
1
1
1
1
1
1
KEGG:R03443
METACYC:N-ACETYLGLUTPREDUCT-RXN
RHEA:21591
reaction
UPa:UCR03443
N-acetyl-L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + N-acetyl-L-glutamyl 5-phosphate + NADPH
1
RL
1
KEGG:R03443
KEGG reaction
METACYC:N-ACETYLGLUTPREDUCT-RXN
Rhea
MetaCyc REACTION
RHEA:21591
Rhea reaction
1
1
1
KEGG:R03444
METACYC:RXN3O-1983
RHEA:26104
reaction
UPa:UCR03444
(R)-homocitrate = H(2)O + homo-cis-aconitate
1
LR
1
KEGG:R03444
KEGG reaction
METACYC:RXN3O-1983
MetaCyc
MetaCyc REACTION
RHEA:26104
Rhea reaction
1
1
1
KEGG:R03445
METACYC:RXN-10720
RHEA:42455
reaction
UPa:UCR03445
4-(2-aminophenyl)-2,4-dioxobutanoate = H(2)O + kynurenate
1
LR
1
KEGG:R03445
KEGG reaction
METACYC:RXN-10720
MetaCyc
MetaCyc REACTION
RHEA:42455
Rhea reaction
1
1
1
KEGG:R03457
METACYC:IMIDPHOSDEHYD-RXN
RHEA:11043
reaction
UPa:UCR03457
D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = H(2)O + imidazole-acetol phosphate
1
LR
1
KEGG:R03457
KEGG reaction
METACYC:IMIDPHOSDEHYD-RXN
MetaCyc
MetaCyc REACTION
RHEA:11043
Rhea reaction
1
1
1
1
1
KEGG:R03458
METACYC:RIBOFLAVINSYNREDUC-RXN
RHEA:17848
reaction
UPa:UCR03458
5-amino-6-(5-phosphoribitylamino)uracil + NADP(+) = 5-amino-6-(5-phosphoribosylamino)uracil + H(+) + NADPH
1
RL
1
KEGG:R03458
KEGG reaction
METACYC:RIBOFLAVINSYNREDUC-RXN
MetaCyc
MetaCyc REACTION
RHEA:17848
Rhea reaction
1
1
1
1
KEGG:R03459
METACYC:RIBOFLAVINSYNDEAM-RXN
RHEA:21871
reaction
UPa:UCR03459
2,5-diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine + H(2)O = 5-amino-6-(5-phosphoribosylamino)uracil + NH(3)
1
LR
1
KEGG:R03459
KEGG reaction
METACYC:RIBOFLAVINSYNDEAM-RXN
MetaCyc
MetaCyc REACTION
RHEA:21871
Rhea reaction
1
1
1
1
KEGG:R03460
METACYC:2.5.1.19-RXN
RHEA:21259
reaction
UPa:UCR03460
3-phosphoshikimate + phosphoenolpyruvate = 5-O-(1-carboxyvinyl)-3-phosphoshikimate + phosphate
1
LR
1
KEGG:R03460
KEGG reaction
METACYC:2.5.1.19-RXN
Rhea
MetaCyc REACTION
RHEA:21259
Rhea reaction
1
1
1
KEGG:R03462
METACYC:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN
RHEA:14416
reaction
UPa:UCR03462
O(2) + biphenyl-2,3-diol = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
1
LR
1
KEGG:R03462
KEGG reaction
METACYC:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:14416
Rhea reaction
1
1
1
1
KEGG:R03464
METACYC:3.5.4.27-RXN
RHEA:19056
reaction
UPa:UCR03464
5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2)O = H(+) + N(5)-formyl-5,6,7,8-tetrahydromethanopterin
1
1
RL
1
LR
1
KEGG:R03464
KEGG reaction
METACYC:3.5.4.27-RXN
Rhea
MetaCyc REACTION
RHEA:19056
Rhea reaction
1
1
1
KEGG:R03470
METACYC:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN
RHEA:23351
reaction
UPa:UCR03470
2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 5-oxo-4,5-dihydro-2-furylacetate + CO(2)
1
LR
1
KEGG:R03470
KEGG reaction
METACYC:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:23351
Rhea reaction
1
1
1
1
KEGG:R03471
METACYC:OHMETPYRKIN-RXN
RHEA:23099
reaction
UPa:UCR03471
4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-methyl-5-phosphomethylpyrimidine + ADP
1
LR
1
KEGG:R03471
KEGG reaction
METACYC:OHMETPYRKIN-RXN
Rhea
MetaCyc REACTION
RHEA:23099
Rhea reaction
1
1
1
1
KEGG:R03503
METACYC:H2PTERIDINEPYROPHOSPHOKIN-RXN
RHEA:11415
reaction
UPa:UCR03503
2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + AMP
1
LR
1
KEGG:R03503
KEGG reaction
METACYC:H2PTERIDINEPYROPHOSPHOKIN-RXN
Rhea
MetaCyc REACTION
RHEA:11415
Rhea reaction
1
1
1
KEGG:R03504
METACYC:H2NEOPTERINALDOL-RXN
RHEA:10543
reaction
UPa:UCR03504
7,8-dihydroneopterin = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde
1
LR
1
KEGG:R03504
KEGG reaction
METACYC:H2NEOPTERINALDOL-RXN
MetaCyc
MetaCyc REACTION
RHEA:10543
Rhea reaction
1
1
1
1
KEGG:R03508
METACYC:IGPSYN-RXN
RHEA:23479
reaction
UPa:UCR03508
1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = CO(2) + H(2)O + indoleglycerol phosphate
1
LR
1
KEGG:R03508
KEGG reaction
METACYC:IGPSYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:23479
Rhea reaction
1
1
KEGG:R03509
METACYC:PRAISOM-RXN
RHEA:21543
reaction
UPa:UCR03509
N-(5-phospho-beta-D-ribosyl)anthranilic acid = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate
1
LR
1
KEGG:R03509
KEGG reaction
METACYC:PRAISOM-RXN
MetaCyc
MetaCyc REACTION
RHEA:21543
Rhea reaction
1
1
1
1
KEGG:R03534
METACYC:2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN
RHEA:21255
RHEA:25264
reaction
UPa:UCR03534
2-hydroxyglutarate + FAD = 2-oxoglutarate + FADH2
1
RL
1
KEGG:R03534
KEGG reaction
METACYC:2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:21255
Rhea reaction
RHEA:25264
Rhea reaction
1
1
1
1
1
1
KEGG:R03543
METACYC:BENZENE-12-DIOXYGENASE-RXN
RHEA:13816
reaction
UPa:UCR03543
H(+) + NADH + O(2) + benzene = NAD(+) + cis-1,2-dihydrobenzene-1,2-diol
1
LR
1
KEGG:R03543
KEGG reaction
METACYC:BENZENE-12-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13816
Rhea reaction
1
1
1
1
1
1
KEGG:R03559
METACYC:TOLUENE-DIOXYGENASE-RXN
RHEA:16740
reaction
UPa:UCR03559
H(+) + NADH + O(2) + toluene = (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD(+)
1
LR
1
KEGG:R03559
KEGG reaction
METACYC:TOLUENE-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:16740
Rhea reaction
1
1
1
1
1
1
KEGG:R03630
METACYC:PHTHALATE-45-DIOXYGENASE-RXN
RHEA:17492
reaction
UPa:UCR03630
H(+) + NADH + O(2) + phthalate = NAD(+) + cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylic acid
1
LR
1
KEGG:R03630
KEGG reaction
METACYC:PHTHALATE-45-DIOXYGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:17492
Rhea reaction
1
1
1
KEGG:R03693
METACYC:S-2-METHYLMALATE-DEHYDRATASE-RXN
RHEA:13532
reaction
UPa:UCR03693
L-citramalate = H(2)O + mesaconate
1
RL
1
KEGG:R03693
KEGG reaction
METACYC:S-2-METHYLMALATE-DEHYDRATASE-RXN
Rhea
MetaCyc REACTION
RHEA:13532
Rhea reaction
1
1
1
KEGG:R03696
METACYC:METHYLASPARTATE-AMMONIA-LYASE-RXN
RHEA:12832
reaction
UPa:UCR03696
(2S,3S)-3-methyl-L-aspartate = NH(3) + mesaconate
1
LR
1
KEGG:R03696
KEGG reaction
METACYC:METHYLASPARTATE-AMMONIA-LYASE-RXN
Rhea
MetaCyc REACTION
RHEA:12832
Rhea reaction
1
1
1
1
KEGG:R03721
METACYC:2.1.1.118-RXN
RHEA:15376
reaction
UPa:UCR03721
S-adenosyl-L-methionine + columbamine = S-adenosyl-L-homocysteine + palmatine
1
LR
1
KEGG:R03721
KEGG reaction
METACYC:2.1.1.118-RXN
MetaCyc
MetaCyc REACTION
RHEA:15376
Rhea reaction
1
1
1
1
KEGG:R03738
METACYC:STRICTOSIDINE-SYNTHASE-RXN
RHEA:15016
reaction
UPa:UCR03738
3alpha(S)-strictosidine + H(2)O = secologanin + tryptamine
1
RL
1
KEGG:R03738
KEGG reaction
METACYC:STRICTOSIDINE-SYNTHASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15016
Rhea reaction
1
1
KEGG:R03791
METACYC:MANDELATE-RACEMASE-RXN
RHEA:13948
reaction
UPa:UCR03791
(S)-mandelate = (R)-mandelate
1
RL
1
KEGG:R03791
KEGG reaction
METACYC:MANDELATE-RACEMASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13948
Rhea reaction
1
1
1
1
KEGG:R03793
METACYC:MANDELATE-DEHYDROGENASE-RXN
RHEA:15752
reaction
UPa:UCR03793
(S)-mandelate + acceptor = phenylglyoxylate + reduced acceptor
1
LR
1
KEGG:R03793
KEGG reaction
METACYC:MANDELATE-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15752
Rhea reaction
1
1
1
1
KEGG:R03831
METACYC:RETICULINE-OXIDASE-RXN
RHEA:19888
reaction
UPa:UCR03831
(S)-reticuline + O(2) = (S)-scoulerine + H(2)O(2)
1
LR
1
KEGG:R03831
KEGG reaction
METACYC:RETICULINE-OXIDASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:19888
Rhea reaction
1
1
1
1
1
KEGG:R03832
METACYC:2.1.1.116-RXN
RHEA:17792
reaction
UPa:UCR03832
(S)-3'-hydroxy-N-methylcoclaurine + S-adenosyl-L-methionine = (S)-reticuline + H(+) + S-adenosyl-L-homocysteine
1
LR
1
KEGG:R03832
KEGG reaction
METACYC:2.1.1.116-RXN
MetaCyc
MetaCyc REACTION
RHEA:17792
Rhea reaction
1
1
KEGG:R03892
METACYC:RXN-9922
RHEA:42435
reaction
UPa:UCR03892
maleylacetate = 3-hydroxy-cis,cis-muconate
1
RL
1
KEGG:R03892
KEGG reaction
METACYC:RXN-9922
MetaCyc
MetaCyc REACTION
RHEA:42435
Rhea reaction
1
1
1
KEGG:R03896
METACYC:R-2-METHYLMALATE-DEHYDRATASE-RXN
RHEA:22335
reaction
UPa:UCR03896
(R)-citramalate = 2-methylmaleate + H(2)O
1
LR
1
KEGG:R03896
KEGG reaction
METACYC:R-2-METHYLMALATE-DEHYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22335
Rhea reaction
1
1
1
KEGG:R03898
RHEA:42427
reaction
UPa:UCR03898
2-methylmaleate + H(2)O = D-erythro-3-methylmalic acid
1
LR
2
KEGG:R03898
KEGG reaction
RHEA:42427
Rhea reaction
1
1
KEGG:R03908
METACYC:2-METHYLENEGLUTARATE-MUTASE-RXN
RHEA:13796
reaction
UPa:UCR03908
2-methyleneglutarate = 2-methylene-3-methylsuccinate
1
LR
1
KEGG:R03908
KEGG reaction
METACYC:2-METHYLENEGLUTARATE-MUTASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13796
Rhea reaction
1
1
1
1
1
1
KEGG:R03932
METACYC:6.2.1.33-RXN
RHEA:23223
reaction
UPa:UCR03932
4-chlorobenzoate + ATP + CoA = 4-chlorobenzoyl-CoA + AMP + diphosphate
1
LR
1
KEGG:R03932
KEGG reaction
METACYC:6.2.1.33-RXN
MetaCyc
MetaCyc REACTION
RHEA:23223
Rhea reaction
1
1
1
KEGG:R03937
METACYC:RXN-1083
RHEA:42451
reaction
UPa:UCR03937
H(2)O + glutaconyl-1-CoA = 2-hydroxyglutaryl-CoA
1
RL
1
KEGG:R03937
KEGG reaction
METACYC:RXN-1083
MetaCyc
MetaCyc REACTION
RHEA:42451
Rhea reaction
1
1
1
1
1
KEGG:R03947
METACYC:DIMETHUROPORDEHYDROG-RXN
RHEA:15616
reaction
UPa:UCR03947
NAD(+) + precorrin-2 = H(+) + NADH + sirohydrochlorin
1
LR
1
KEGG:R03947
KEGG reaction
METACYC:DIMETHUROPORDEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:15616
Rhea reaction
1
1
1
1
1
KEGG:R03948
METACYC:2.1.1.130-RXN
RHEA:16844
reaction
UPa:UCR03948
S-adenosyl-L-methionine + precorrin-2 = H(+) + S-adenosyl-L-homocysteine + precorrin-3A
1
LR
1
KEGG:R03948
KEGG reaction
METACYC:2.1.1.130-RXN
Rhea
MetaCyc REACTION
RHEA:16844
Rhea reaction
1
1
1
KEGG:R03968
METACYC:3-ISOPROPYLMALISOM-RXN
RHEA:16296
reaction
UPa:UCR03968
(2S)-2-isopropylmalate = 2-isopropylmaleate + H(2)O
1
LR
1
KEGG:R03968
KEGG reaction
METACYC:3-ISOPROPYLMALISOM-RXN
Rhea
MetaCyc REACTION
RHEA:16296
Rhea reaction
1
1
1
1
KEGG:R04000
METACYC:RXN-1082
RHEA:42079
reaction
UPa:UCR04000
2-hydroxyglutarate + acetyl-CoA = 2-hydroxyglutaryl-CoA + acetate
1
LR
1
KEGG:R04000
KEGG reaction
METACYC:RXN-1082
MetaCyc
MetaCyc REACTION
RHEA:42079
Rhea reaction
1
1
1
KEGG:R04001
METACYC:RXN-8991
RHEA:10679
reaction
UPa:UCR04001
(2R,3S)-3-isopropylmalate = 2-isopropylmaleate + H(2)O
1
RL
2
KEGG:R04001
KEGG reaction
METACYC:RXN-8991
MetaCyc
MetaCyc REACTION
RHEA:10679
Rhea reaction
1
1
1
1
KEGG:R04013
METACYC:2.1.1.99-RXN
RHEA:11339
reaction
UPa:UCR04013
3-hydroxy-16-methoxy-2,3-dihydrotabersonine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + desacetoxyvindoline
1
LR
1
KEGG:R04013
KEGG reaction
METACYC:2.1.1.99-RXN
MetaCyc
MetaCyc REACTION
RHEA:11339
Rhea reaction
1
1
1
1
KEGG:R04029
METACYC:ACETCAPR-RXN
RHEA:42507
reaction
UPa:UCR04029
2-oxoglutarate + N(6)-acetyl-L-lysine = 6-acetamido-2-oxohexanoate + L-glutamate
1
LR
1
KEGG:R04029
KEGG reaction
METACYC:ACETCAPR-RXN
Rhea
MetaCyc REACTION
RHEA:42507
Rhea reaction
1
1
1
1
1
1
KEGG:R04030
METACYC:O-SUCCINYLBENZOATE-COA-LIG-RXN
RHEA:17012
reaction
UPa:UCR04030
2-succinylbenzoate + ATP + CoA = 2-succinylbenzoyl-CoA + AMP + diphosphate
1
LR
1
KEGG:R04030
KEGG reaction
METACYC:O-SUCCINYLBENZOATE-COA-LIG-RXN
MetaCyc
MetaCyc REACTION
RHEA:17012
Rhea reaction
1
1
1
KEGG:R04031
METACYC:O-SUCCINYLBENZOATE-COA-SYN-RXN
RHEA:10199
reaction
UPa:UCR04031
2-succinylbenzoate + H(2)O = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylic acid
1
RL
1
KEGG:R04031
KEGG reaction
METACYC:O-SUCCINYLBENZOATE-COA-SYN-RXN
MetaCyc
MetaCyc REACTION
RHEA:10199
Rhea reaction
1
1
1
1
KEGG:R04035
METACYC:HISTPRATPHYD-RXN
RHEA:22831
reaction
UPa:UCR04035
1-(5-phospho-D-ribosyl)-ATP + H(2)O = 1-(5-phosphoribosyl)-5'-AMP + diphosphate
1
LR
1
KEGG:R04035
KEGG reaction
METACYC:HISTPRATPHYD-RXN
MetaCyc
MetaCyc REACTION
RHEA:22831
Rhea reaction
1
1
1
KEGG:R04037
METACYC:HISTCYCLOHYD-RXN
RHEA:20052
reaction
UPa:UCR04037
1-(5-phosphoribosyl)-5'-AMP + H(2)O = 5-(5-phospho-D-ribosylaminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide
1
LR
1
KEGG:R04037
KEGG reaction
METACYC:HISTCYCLOHYD-RXN
MetaCyc
MetaCyc REACTION
RHEA:20052
Rhea reaction
1
1
1
KEGG:R04061
METACYC:RXN-10137
RHEA:19444
reaction
UPa:UCR04061
O(2) + benzene-1,2,4-triol = 3-hydroxy-cis,cis-muconate
1
LR
1
KEGG:R04061
KEGG reaction
METACYC:RXN-10137
MetaCyc
MetaCyc REACTION
RHEA:19444
Rhea reaction
1
1
1
1
1
KEGG:R04088
METACYC:TOLUENE-DIOL-DEHYDROGENASE-RXN
RHEA:25196
reaction
UPa:UCR04088
(1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD(+) = 3-methylcatechol + H(+) + NADH
1
LR
1
KEGG:R04088
KEGG reaction
METACYC:TOLUENE-DIOL-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:25196
Rhea reaction
1
1
1
1
KEGG:R04095
METACYC:RXN-14264
RHEA:31066
reaction
UPa:UCR04095
3-isovaleryl-CoA + FAD = 3-methylcrotonyl-CoA + FADH2
1
LR
1
KEGG:R04095
KEGG reaction
METACYC:RXN-14264
Rhea
MetaCyc REACTION
RHEA:31066
Rhea reaction
1
1
1
1
1
KEGG:R04101
METACYC:3.8.1.7-RXN
RHEA:14856
reaction
UPa:UCR04101
4-chlorobenzoyl-CoA + H(2)O = 4-hydroxybenzoyl-CoA + H(+) + chloride
1
LR
1
KEGG:R04101
KEGG reaction
METACYC:3.8.1.7-RXN
MetaCyc
MetaCyc REACTION
RHEA:14856
Rhea reaction
1
1
1
1
1
1
KEGG:R04109
METACYC:GLUTRNAREDUCT-RXN
RHEA:12347
reaction
UPa:UCR04109
H(+) + L-glutamyl-tRNA(Glu) + NADPH = (S)-4-amino-5-oxopentanoic acid + NADP(+) + tRNA(Glu)
1
LR
1
KEGG:R04109
KEGG reaction
METACYC:GLUTRNAREDUCT-RXN
MetaCyc
MetaCyc REACTION
RHEA:12347
Rhea reaction
1
1
1
1
1
1
KEGG:R04138
METACYC:METHYLCROTONYL-COA-CARBOXYLASE-RXN
RHEA:13592
reaction
UPa:UCR04138
3-methylcrotonyl-CoA + ATP + bicarbonate = 3-methylglutaconyl-CoA + ADP + phosphate
1
LR
1
KEGG:R04138
KEGG reaction
METACYC:METHYLCROTONYL-COA-CARBOXYLASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13592
Rhea reaction
1
1
1
1
1
1
1
KEGG:R04142
METACYC:KETAMID-RXN
RHEA:42511
reaction
UPa:UCR04142
5-acetamidopentanoate + CO(2) + H(+) + NADH = 6-acetamido-2-oxohexanoate + H(2)O + NAD(+)
1
RL
1
KEGG:R04142
KEGG reaction
METACYC:KETAMID-RXN
MetaCyc
MetaCyc REACTION
RHEA:42511
Rhea reaction
1
1
1
1
KEGG:R04143
METACYC:5-METHYLTHIORIBOSE-KINASE-RXN
RHEA:22315
reaction
UPa:UCR04143
5-methylthio-alpha-D-ribose + ATP = ADP + S-methyl-5-thio-alpha-D-ribose 1-phosphate
1
LR
1
KEGG:R04143
KEGG reaction
METACYC:5-METHYLTHIORIBOSE-KINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:22315
Rhea reaction
1
1
1
1
1
1
KEGG:R04144
METACYC:GLYRIBONUCSYN-RXN
RHEA:17456
reaction
UPa:UCR04144
5-phospho-beta-D-ribosylamine + ATP + glycine = ADP + N(1)-(5-phospho-D-ribosyl)glycinamide + phosphate
1
LR
1
KEGG:R04144
KEGG reaction
METACYC:GLYRIBONUCSYN-RXN
Rhea
MetaCyc REACTION
RHEA:17456
Rhea reaction
1
1
1
1
1
KEGG:R04148
METACYC:DMBPPRIBOSYLTRANS-RXN
RHEA:11199
reaction
UPa:UCR04148
5,6-dimethylbenzimidazole + nicotinate D-ribonucleotide = H(+) + alpha-ribazole 5'-phosphate + nicotinate
1
LR
1
KEGG:R04148
KEGG reaction
METACYC:DMBPPRIBOSYLTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:11199
Rhea reaction
1
1
1
1
KEGG:R04173
METACYC:PSERTRANSAM-RXN
RHEA:14332
reaction
UPa:UCR04173
2-oxoglutarate + O-phospho-L-serine = 3-phosphohydroxypyruvate + L-glutamate
1
RL
1
KEGG:R04173
KEGG reaction
METACYC:PSERTRANSAM-RXN
Rhea
MetaCyc REACTION
RHEA:14332
Rhea reaction
1
1
1
1
1
KEGG:R04189
METACYC:SUCCARGDIHYDRO-RXN
RHEA:19536
reaction
UPa:UCR04189
2 H(2)O + N(2)-succinyl-L-arginine = CO(2) + N(2)-succinyl-L-ornithine + 2 NH(3)
1
LR
1
KEGG:R04189
KEGG reaction
METACYC:SUCCARGDIHYDRO-RXN
MetaCyc
MetaCyc REACTION
RHEA:19536
Rhea reaction
1
1
1
1
1
1
KEGG:R04198
RHEA:35326
reaction
UPa:UCR04198
(S)-tetrahydrodipicolinate + H(2)O + NAD(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADH
1
RL
1
KEGG:R04198
KEGG reaction
RHEA:35326
Rhea reaction
1
1
1
1
1
1
KEGG:R04199
RHEA:35334
reaction
UPa:UCR04199
(S)-tetrahydrodipicolinate + H(2)O + NADP(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADPH
1
RL
1
KEGG:R04199
KEGG reaction
RHEA:35334
Rhea reaction
1
1
1
1
1
KEGG:R04208
METACYC:AIRS-RXN
RHEA:23035
reaction
UPa:UCR04208
2-formamido-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + phosphate
1
LR
1
KEGG:R04208
KEGG reaction
METACYC:AIRS-RXN
MetaCyc
MetaCyc REACTION
RHEA:23035
Rhea reaction
1
1
1
KEGG:R04209
METACYC:AIRCARBOXY-RXN
RHEA:10795
reaction
UPa:UCR04209
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO(2)
1
RL
1
KEGG:R04209
KEGG reaction
METACYC:AIRCARBOXY-RXN
Rhea
MetaCyc REACTION
RHEA:10795
Rhea reaction
1
1
1
1
1
KEGG:R04210
METACYC:ERYTHRON4PDEHYDROG-RXN
RHEA:18832
reaction
UPa:UCR04210
4-phospho-D-erythronate + NAD(+) = (R)-3-hydroxy-2-oxo-4-phosphonooxybutanoic acid + H(+) + NADH
1
LR
1
KEGG:R04210
KEGG reaction
METACYC:ERYTHRON4PDEHYDROG-RXN
MetaCyc
MetaCyc REACTION
RHEA:18832
Rhea reaction
1
1
1
1
KEGG:R04217
METACYC:SUCCORNTRANSAM-RXN
RHEA:16956
reaction
UPa:UCR04217
2-oxoglutarate + N(2)-succinyl-L-ornithine = L-glutamate + N-succinyl-L-glutamate 5-semialdehyde
1
LR
1
KEGG:R04217
KEGG reaction
METACYC:SUCCORNTRANSAM-RXN
MetaCyc
MetaCyc REACTION
RHEA:16956
Rhea reaction
1
1
1
KEGG:R04218
RHEA:34482
reaction
UPa:UCR04218
prephytoene diphosphate = 15-cis-phytoene + diphosphate
1
LR
2
KEGG:R04218
KEGG reaction
RHEA:34482
Rhea reaction
1
1
1
1
1
1
KEGG:R04231
METACYC:P-PANTOCYSLIG-RXN
RHEA:19400
reaction
UPa:UCR04231
(R)-4'-phosphopantothenate + CTP + L-cysteine = CMP + N-[(R)-4-phosphonopantothenoyl]-L-cysteine + diphosphate
1
LR
1
KEGG:R04231
KEGG reaction
METACYC:P-PANTOCYSLIG-RXN
MetaCyc
MetaCyc REACTION
RHEA:19400
Rhea reaction
1
1
1
1
1
KEGG:R04265
METACYC:RXN-9159
RHEA:34570
reaction
UPa:UCR04265
CDP-3,6-dideoxy-D-glucose + NADP(+) = CDP-4-dehydro-3,6-dideoxy-D-glucose + H(+) + NADPH
1
RL
1
KEGG:R04265
KEGG reaction
METACYC:RXN-9159
MetaCyc
MetaCyc REACTION
RHEA:34570
Rhea reaction
1
1
KEGG:R04266
METACYC:RXN-9160
RHEA:21659
reaction
UPa:UCR04266
CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose
1
LR
1
KEGG:R04266
KEGG reaction
METACYC:RXN-9160
MetaCyc
MetaCyc REACTION
RHEA:21659
Rhea reaction
1
1
1
1
1
KEGG:R04285
METACYC:1.1.1.220-RXN
RHEA:11775
reaction
UPa:UCR04285
6-lactoyl-5,6,7,8-tetrahydropterin + NADP(+) = 6-pyruvoyl-tetrahydropterin + H(+) + NADPH
1
RL
1
KEGG:R04285
KEGG reaction
METACYC:1.1.1.220-RXN
MetaCyc
MetaCyc REACTION
RHEA:11775
Rhea reaction
1
1
1
KEGG:R04286
METACYC:4.2.3.12-RXN
RHEA:22051
reaction
UPa:UCR04286
7,8-dihydroneopterin triphosphate = 6-pyruvoyl-tetrahydropterin + triphosphate
1
LR
1
KEGG:R04286
KEGG reaction
METACYC:4.2.3.12-RXN
MetaCyc
MetaCyc REACTION
RHEA:22051
Rhea reaction
1
1
1
1
1
KEGG:R04292
METACYC:QUINOLINATE-SYNTHA-RXN
RHEA:25891
reaction
UPa:UCR04292
2 H(2)O + phosphate + quinolinate = glycerone phosphate + iminoaspartate
1
RL
1
KEGG:R04292
KEGG reaction
METACYC:QUINOLINATE-SYNTHA-RXN
MetaCyc
MetaCyc REACTION
RHEA:25891
Rhea reaction
1
1
1
KEGG:R04293
METACYC:RXN-5721
RHEA:25150
reaction
UPa:UCR04293
H(2)O + quinolinate = 2-amino-3-carboxymuconate semialdehyde
1
RL
2
KEGG:R04293
KEGG reaction
METACYC:RXN-5721
MetaCyc
MetaCyc REACTION
RHEA:25150
Rhea reaction
1
1
1
1
KEGG:R04296
METACYC:RXN-743
RHEA:12856
reaction
UPa:UCR04296
(S)-4-hydroxymandelonitrile + UDP-alpha-D-glucose = UDP + dhurrin
1
LR
1
KEGG:R04296
KEGG reaction
METACYC:RXN-743
Rhea
MetaCyc REACTION
RHEA:12856
Rhea reaction
1
1
1
1
KEGG:R04325
METACYC:GART-RXN
RHEA:15056
reaction
UPa:UCR04325
10-formyl-5,6,7,8-tetrahydrofolate + N(1)-(5-phospho-D-ribosyl)glycinamide = 5,6,7,8-tetrahydrofolate + N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide
1
LR
1
KEGG:R04325
KEGG reaction
METACYC:GART-RXN
Rhea
MetaCyc REACTION
RHEA:15056
Rhea reaction
1
1
1
KEGG:R04336
METACYC:RXN-4821
RHEA:24800
reaction
UPa:UCR04336
(S)-2-amino-6-oxopimelate = (S)-tetrahydrodipicolinate + H(2)O
1
RL
1
KEGG:R04336
KEGG reaction
METACYC:RXN-4821
MetaCyc
MetaCyc REACTION
RHEA:24800
Rhea reaction
1
1
1
1
KEGG:R04347
METACYC:2.1.1.86-RXN
RHEA:17588
reaction
UPa:UCR04347
5-methyl-5,6,7,8-tetrahydromethanopterin + coenzyme M = 5,6,7,8-tetrahydromethanopterin + methyl-coenzyme M
1
LR
1
KEGG:R04347
KEGG reaction
METACYC:2.1.1.86-RXN
Rhea
MetaCyc REACTION
RHEA:17588
Rhea reaction
1
1
1
1
1
KEGG:R04364
METACYC:2.3.1.89-RXN
RHEA:13088
reaction
UPa:UCR04364
(S)-tetrahydrodipicolinate + H(2)O + acetyl-CoA = (S)-2-acetamido-6-oxopimelate + CoA
1
LR
1
KEGG:R04364
KEGG reaction
METACYC:2.3.1.89-RXN
MetaCyc
MetaCyc REACTION
RHEA:13088
Rhea reaction
1
1
1
1
1
KEGG:R04365
METACYC:TETHYDPICSUCC-RXN
RHEA:17328
reaction
UPa:UCR04365
(S)-tetrahydrodipicolinate + H(2)O + succinyl-CoA = CoA + L-2-succinylamino-6-oxopimelate
1
LR
1
KEGG:R04365
KEGG reaction
METACYC:TETHYDPICSUCC-RXN
Rhea
MetaCyc REACTION
RHEA:17328
Rhea reaction
1
1
1
KEGG:R04371
METACYC:HOMOACONITATE-HYDRATASE-RXN
RHEA:15488
reaction
UPa:UCR04371
homoisocitrate = H(2)O + homo-cis-aconitate
1
RL
1
KEGG:R04371
KEGG reaction
METACYC:HOMOACONITATE-HYDRATASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15488
Rhea reaction
1
1
1
KEGG:R04376
METACYC:1.13.11.16-RXN
RHEA:23843
reaction
UPa:UCR04376
3-(2,3-dihydroxyphenyl)propanoate + O(2) = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate
1
LR
1
KEGG:R04376
KEGG reaction
METACYC:1.13.11.16-RXN
MetaCyc
MetaCyc REACTION
RHEA:23843
Rhea reaction
1
1
KEGG:R04379
METACYC:5.3.3.10-RXN
RHEA:18816
reaction
UPa:UCR04379
5-carboxymethyl-2-hydroxymuconic acid = 5-oxopent-3-ene-1,2,5-tricarboxylic acid
1
LR
1
KEGG:R04379
KEGG reaction
METACYC:5.3.3.10-RXN
MetaCyc
MetaCyc REACTION
RHEA:18816
Rhea reaction
1
1
1
KEGG:R04380
METACYC:CARBOXY-OXOHEPT-ENEDIOATE-DECARBOXY-RXN
reaction
UPa:UCR04380
5-oxopent-3-ene-1,2,5-tricarboxylic acid = 2-hydroxy-hept-2,4-diene-1,7-dioic acid + CO(2)
1
LR
1
KEGG:R04380
KEGG reaction
METACYC:CARBOXY-OXOHEPT-ENEDIOATE-DECARBOXY-RXN
MetaCyc
MetaCyc REACTION
1
1
KEGG:R04382
METACYC:OLIGOGALACTURONIDE-LYASE-RXN
RHEA:20272
reaction
UPa:UCR04382
4-(4-deoxy-alpha-D-gluc-4-enosyluronic acid)-D-galacturonic acid = 2 5-dehydro-4-deoxy-D-glucuronic acid
1
LR
1
KEGG:R04382
KEGG reaction
METACYC:OLIGOGALACTURONIDE-LYASE-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:20272
Rhea reaction
1
1
KEGG:R04383
METACYC:5.3.1.17-RXN
RHEA:23899
reaction
UPa:UCR04383
5-dehydro-4-deoxy-D-glucuronic acid = 3-deoxy-D-glycero-hexo-2,5-diulosonate
1
LR
1
KEGG:R04383
KEGG reaction
METACYC:5.3.1.17-RXN
Rhea
MetaCyc REACTION
RHEA:23899
Rhea reaction
1
1
1
1
1
1
KEGG:R04390
reaction
UPa:UCR04390
H(+) + NADPH + alpha-aminoadipoyl-S-acyl enzyme = L-2-aminoadipate 6-semialdahyde + NADP(+) + holo-Lys2
1
LR
3
KEGG:R04390
KEGG reaction
1
1
1
1
KEGG:R04393
RHEA:42403
reaction
UPa:UCR04393
lactose + protein N(pi)-phospho-L-histidine = lactose 6-phosphate + protein-L-histidine
1
LR
1
KEGG:R04393
KEGG reaction
RHEA:42403
Rhea reaction
1
1
1
1
KEGG:R04405
METACYC:HOMOCYSMET-RXN
RHEA:21199
reaction
UPa:UCR04405
5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate
1
LR
1
KEGG:R04405
KEGG reaction
METACYC:HOMOCYSMET-RXN
Rhea
MetaCyc REACTION
RHEA:21199
Rhea reaction
1
1
1
1
1
1
KEGG:R04418
METACYC:CHMS-DEHYDROGENASE-RXN
RHEA:15684
reaction
UPa:UCR04418
5-carboxymethyl-2-hydroxymuconate semialdehyde + H(2)O + NAD(+) = 5-carboxymethyl-2-hydroxymuconic acid + H(+) + NADH
1
LR
1
KEGG:R04418
KEGG reaction
METACYC:CHMS-DEHYDROGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:15684
Rhea reaction
1
1
KEGG:R04420
METACYC:5.3.1.23-RXN
RHEA:19992
reaction
UPa:UCR04420
S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate
1
LR
1
KEGG:R04420
KEGG reaction
METACYC:5.3.1.23-RXN
MetaCyc
MetaCyc REACTION
RHEA:19992
Rhea reaction
1
1
1
1
1
KEGG:R04426
METACYC:3-ISOPROPYLMALDEHYDROG-RXN
RHEA:10895
reaction
UPa:UCR04426
(2R,3S)-3-isopropylmalate + NAD(+) = 3-carboxy-4-methyl-2-oxopentanoate + H(+) + NADH
1
LR
1
KEGG:R04426
KEGG reaction
METACYC:3-ISOPROPYLMALDEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:10895
Rhea reaction
1
1
1
1
KEGG:R04427
METACYC:RXN3O-178
RHEA:21131
reaction
UPa:UCR04427
S-adenosyl-L-methionine + zymosterol = S-adenosyl-L-homocysteine + fecosterol
1
LR
1
KEGG:R04427
KEGG reaction
METACYC:RXN3O-178
MetaCyc
MetaCyc REACTION
RHEA:21131
Rhea reaction
1
1
1
1
1
KEGG:R04440
RHEA:31142
reaction
UPa:UCR04440
(R)-2,3-dihydroxy-3-methylbutanoate + NADP(+) = 2-oxo-3-hydroxyisovalerate + H(+) + NADPH
1
RL
2
KEGG:R04440
KEGG reaction
RHEA:31142
Rhea reaction
1
1
1
KEGG:R04441
METACYC:DIHYDROXYISOVALDEHYDRAT-RXN
RHEA:24812
reaction
UPa:UCR04441
(R)-2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H(2)O
1
LR
1
KEGG:R04441
KEGG reaction
METACYC:DIHYDROXYISOVALDEHYDRAT-RXN
MetaCyc
MetaCyc REACTION
RHEA:24812
Rhea reaction
1
1
1
1
KEGG:R04448
METACYC:THIAZOLSYN3-RXN
RHEA:24215
reaction
UPa:UCR04448
5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphoethyl)-thiazole + ADP
1
LR
1
KEGG:R04448
KEGG reaction
METACYC:THIAZOLSYN3-RXN
MetaCyc
MetaCyc REACTION
RHEA:24215
Rhea reaction
1
1
1
1
KEGG:R04455
METACYC:H2-METHYLENE-THMPT-DEHYDRO-RXN
RHEA:20020
reaction
UPa:UCR04455
5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2) = 5,10-methylene-5,6,7,8-tetrahydromethanopterin + H(+)
1
LR
1
KEGG:R04455
KEGG reaction
METACYC:H2-METHYLENE-THMPT-DEHYDRO-RXN
Rhea
MetaCyc REACTION
RHEA:20020
Rhea reaction
1
1
1
1
KEGG:R04456
METACYC:1.5.99.9-RXN
RHEA:16724
reaction
UPa:UCR04456
5,10-methylene-5,6,7,8-tetrahydromethanopterin + coenzyme F420 = 1,5-dihydro-coenzyme F(420) + 5,10-methenyl-5,6,7,8-tetrahydromethanopterin
1
RL
1
KEGG:R04456
KEGG reaction
METACYC:1.5.99.9-RXN
Rhea
MetaCyc REACTION
RHEA:16724
Rhea reaction
1
1
1
1
1
KEGG:R04457
METACYC:LUMAZINESYN-RXN
RHEA:26155
reaction
UPa:UCR04457
2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + 2 H(2)O + phosphate
1
LR
1
KEGG:R04457
KEGG reaction
METACYC:LUMAZINESYN-RXN
MetaCyc
Rhea
MetaCyc REACTION
RHEA:26155
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R04463
METACYC:FGAMSYN-RXN
RHEA:17132
reaction
UPa:UCR04463
ATP + H(2)O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-phospho-D-ribosyl)acetamidine + ADP + L-glutamate + phosphate
1
LR
1
KEGG:R04463
KEGG reaction
METACYC:FGAMSYN-RXN
Rhea
MetaCyc REACTION
RHEA:17132
Rhea reaction
1
1
1
1
KEGG:R04464
METACYC:METHELENE-THMPT-OXI-RXN
RHEA:21147
reaction
UPa:UCR04464
1,5-dihydro-coenzyme F(420) + 5,10-methylene-5,6,7,8-tetrahydromethanopterin = 5-methyl-5,6,7,8-tetrahydromethanopterin + coenzyme F420
1
LR
1
KEGG:R04464
KEGG reaction
METACYC:METHELENE-THMPT-OXI-RXN
Rhea
MetaCyc REACTION
RHEA:21147
Rhea reaction
1
1
1
1
KEGG:R04467
METACYC:RXN-4822
RHEA:25318
reaction
UPa:UCR04467
2-oxoglutarate + N-acetyl-LL-2,6-diaminopimelate = (S)-2-acetamido-6-oxopimelate + L-glutamate
1
RL
1
KEGG:R04467
KEGG reaction
METACYC:RXN-4822
MetaCyc
MetaCyc REACTION
RHEA:25318
Rhea reaction
1
1
1
1
KEGG:R04475
METACYC:SUCCINYLDIAMINOPIMTRANS-RXN
RHEA:11963
reaction
UPa:UCR04475
2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate
1
RL
1
KEGG:R04475
KEGG reaction
METACYC:SUCCINYLDIAMINOPIMTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:11963
Rhea reaction
1
1
1
1
KEGG:R04509
METACYC:PYRIMSYN3-RXN
RHEA:19896
reaction
UPa:UCR04509
4-amino-2-methyl-5-phosphomethylpyrimidine + ATP = 4-amino-2-methyl-5-diphosphomethylpyrimidine + ADP
1
LR
1
KEGG:R04509
KEGG reaction
METACYC:PYRIMSYN3-RXN
MetaCyc
MetaCyc REACTION
RHEA:19896
Rhea reaction
1
1
1
1
1
KEGG:R04540
METACYC:1.8.98.1-RXN
RHEA:18088
reaction
UPa:UCR04540
coenzyme M-coenzyme B heterodisulfide + dihydromethanophenazine = coenzyme B + coenzyme M + methanophenazine
1
LR
1
KEGG:R04540
KEGG reaction
METACYC:1.8.98.1-RXN
Rhea
MetaCyc REACTION
RHEA:18088
Rhea reaction
1
1
1
1
KEGG:R04541
METACYC:METHYL-COM-HTP-RXN
RHEA:12535
reaction
UPa:UCR04541
coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane
1
LR
1
KEGG:R04541
KEGG reaction
METACYC:METHYL-COM-HTP-RXN
Rhea
MetaCyc REACTION
RHEA:12535
Rhea reaction
1
1
1
1
KEGG:R04549
METACYC:LIPIDXSYNTHESIS-RXN
RHEA:25216
reaction
UPa:UCR04549
H(2)O + UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine = UMP + lipid X
1
LR
1
KEGG:R04549
KEGG reaction
METACYC:LIPIDXSYNTHESIS-RXN
MetaCyc
MetaCyc REACTION
RHEA:25216
Rhea reaction
1
1
1
1
KEGG:R04550
RHEA:17820
reaction
UPa:UCR04550
(3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] + UDP-3-O-(3-hydroxytetradecanoyl)-D-glucosamine = UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine + acyl-carrier protein
1
LR
1
KEGG:R04550
KEGG reaction
RHEA:17820
Rhea reaction
1
1
1
1
1
KEGG:R04558
METACYC:GLUTAMIDOTRANS-RXN
RHEA:24796
reaction
UPa:UCR04558
5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide + L-glutamine = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate + L-glutamate
1
1
LR
1
LR
1
KEGG:R04558
KEGG reaction
METACYC:GLUTAMIDOTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:24796
Rhea reaction
1
1
1
KEGG:R04559
METACYC:AICARSYN-RXN
RHEA:23923
reaction
UPa:UCR04559
(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinic acid = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + fumarate
1
LR
1
KEGG:R04559
KEGG reaction
METACYC:AICARSYN-RXN
Rhea
MetaCyc REACTION
RHEA:23923
Rhea reaction
1
1
1
1
KEGG:R04560
METACYC:AICARTRANSFORM-RXN
RHEA:22195
reaction
UPa:UCR04560
10-formyl-5,6,7,8-tetrahydrofolate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide = 5,6,7,8-tetrahydrofolate + 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1
LR
1
KEGG:R04560
KEGG reaction
METACYC:AICARTRANSFORM-RXN
Rhea
MetaCyc REACTION
RHEA:22195
Rhea reaction
1
1
1
1
KEGG:R04567
RHEA:13928
reaction
UPa:UCR04567
(3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] + UDP-N-acetyl-alpha-D-glucosamine = UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine + acyl-carrier protein
1
LR
1
KEGG:R04567
KEGG reaction
RHEA:13928
Rhea reaction
1
1
1
1
KEGG:R04587
METACYC:UDPACYLGLCNACDEACETYL-RXN
RHEA:25212
reaction
UPa:UCR04587
H(2)O + UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine = UDP-3-O-(3-hydroxytetradecanoyl)-D-glucosamine + acetate
1
LR
1
KEGG:R04587
KEGG reaction
METACYC:UDPACYLGLCNACDEACETYL-RXN
MetaCyc
MetaCyc REACTION
RHEA:25212
Rhea reaction
1
1
1
1
1
1
KEGG:R04591
METACYC:SAICARSYN-RXN
RHEA:22631
reaction
UPa:UCR04591
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + ATP + L-aspartate = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinic acid + ADP + phosphate
1
LR
1
KEGG:R04591
KEGG reaction
METACYC:SAICARSYN-RXN
Rhea
MetaCyc REACTION
RHEA:22631
Rhea reaction
1
1
1
1
KEGG:R04594
METACYC:RIBAZOLEPHOSPHAT-RXN
RHEA:24459
RHEA:30370
reaction
UPa:UCR04594
H(2)O + alpha-ribazole 5'-phosphate = alpha-ribazole + phosphate
1
LR
1
KEGG:R04594
KEGG reaction
METACYC:RIBAZOLEPHOSPHAT-RXN
MetaCyc
MetaCyc REACTION
RHEA:24459
Rhea reaction
RHEA:30370
Rhea reaction
1
1
1
1
KEGG:R04606
METACYC:LIPIDADISACCHARIDESYNTH-RXN
RHEA:22671
reaction
UPa:UCR04606
UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine + lipid X = 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-alpha-D-glucosaminyl-1,6-beta-D-glucosamine 1-phosphate + UDP
1
LR
1
KEGG:R04606
KEGG reaction
METACYC:LIPIDADISACCHARIDESYNTH-RXN
MetaCyc
MetaCyc REACTION
RHEA:22671
Rhea reaction
1
1
1
1
KEGG:R04621
METACYC:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
RHEA:25309
reaction
UPa:UCR04621
7,8-dihydroneopterin + phosphate = 7,8-dihydroneopterin 3'-phosphate + H(2)O
1
RL
1
KEGG:R04621
KEGG reaction
METACYC:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
MetaCyc
MetaCyc REACTION
RHEA:25309
Rhea reaction
1
1
1
1
KEGG:R04638
METACYC:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
RHEA:25305
reaction
UPa:UCR04638
7,8-dihydroneopterin triphosphate + H(2)O = 7,8-dihydroneopterin 3'-phosphate + diphosphate
1
LR
1
KEGG:R04638
KEGG reaction
METACYC:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
MetaCyc
MetaCyc REACTION
RHEA:25305
Rhea reaction
1
1
1
KEGG:R04639
reaction
UPa:UCR04639
7,8-dihydroneopterin triphosphate + H(2)O = 2,5-diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine
1
RL
4
KEGG:R04639
KEGG reaction
1
1
KEGG:R04640
METACYC:PRIBFAICARPISOM-RXN
RHEA:15472
reaction
UPa:UCR04640
5-(5-phospho-D-ribosylaminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide = 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide
1
LR
1
KEGG:R04640
KEGG reaction
METACYC:PRIBFAICARPISOM-RXN
MetaCyc
MetaCyc REACTION
RHEA:15472
Rhea reaction
1
1
1
1
KEGG:R04657
METACYC:TETRAACYLDISACC4KIN-RXN
RHEA:20703
reaction
UPa:UCR04657
2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-alpha-D-glucosaminyl-1,6-beta-D-glucosamine 1-phosphate + ATP = ADP + lipid IV(A)
1
LR
1
KEGG:R04657
KEGG reaction
METACYC:TETRAACYLDISACC4KIN-RXN
Rhea
MetaCyc REACTION
RHEA:20703
Rhea reaction
1
1
1
1
KEGG:R04658
METACYC:KDOTRANS-RXN
RHEA:28069
reaction
UPa:UCR04658
CMP-3-deoxy-D-manno-octulosonate + lipid IV(A) = 3-deoxy-D-manno-octulosonyl-lipid IV((A)) + CMP
1
LR
1
KEGG:R04658
KEGG reaction
METACYC:KDOTRANS-RXN
MetaCyc
MetaCyc REACTION
RHEA:28069
Rhea reaction
1
1
1
1
KEGG:R04672
METACYC:RXN-14037
RHEA:24808
reaction
UPa:UCR04672
(S)-2-acetolactate + thiamine diphosphate = 2-hydroxyethyl-ThPP + pyruvate
1
RL
2
KEGG:R04672
KEGG reaction
METACYC:RXN-14037
MetaCyc
MetaCyc REACTION
RHEA:24808
Rhea reaction
1
1
1
1
KEGG:R04673
RHEA:33694
reaction
UPa:UCR04673
2-hydroxyethyl-ThPP + 2-oxobutanoate = (S)-2-acetyl-2-hydroxybutanoic acid + thiamine diphosphate
1
LR
1
KEGG:R04673
KEGG reaction
RHEA:33694
Rhea reaction
1
1
1
1
1
KEGG:R04692
METACYC:2.1.1.140-RXN
RHEA:17412
reaction
UPa:UCR04692
(S)-coclaurine + S-adenosyl-L-methionine = (S)-N-methylcoclaurine + H(+) + S-adenosyl-L-homocysteine
1
LR
1
KEGG:R04692
KEGG reaction
METACYC:2.1.1.140-RXN
MetaCyc
MetaCyc REACTION
RHEA:17412
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R04694
METACYC:1.1.3.34-RXN
RHEA:23579
reaction
UPa:UCR04694
2 H(2)O + NADP(+) + berbamunine = (R)-N-methylcoclaurine + (S)-N-methylcoclaurine + H(+) + NADPH + O(2)
1
RL
1
KEGG:R04694
KEGG reaction
METACYC:1.1.3.34-RXN
MetaCyc
MetaCyc REACTION
RHEA:23579
Rhea reaction
1
1
1
1
1
KEGG:R04862
reaction
UPa:UCR04862
NAD(+) + homoisocitrate = 2-oxaloglutaric acid + H(+) + NADH
1
LR
1
KEGG:R04862
KEGG reaction
1
1
1
1
KEGG:R04863
reaction
UPa:UCR04863
alpha-aminoadipoyl-C6-AMP + holo-Lys2 = AMP + alpha-aminoadipoyl-S-acyl enzyme
1
LR
2
KEGG:R04863
KEGG reaction
1
1
1
1
1
1
KEGG:R04868
METACYC:2.3.1.164-RXN
RHEA:20723
reaction
UPa:UCR04868
H(2)O + isopenicillin N + phenylacetyl-CoA = CoA + L-alpha-aminoadipate + penicillin G
1
LR
1
KEGG:R04868
KEGG reaction
METACYC:2.3.1.164-RXN
Rhea
MetaCyc REACTION
RHEA:20723
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R04870
METACYC:6.3.2.26-RXN
RHEA:23199
reaction
UPa:UCR04870
3 ATP + H(2)O + L-alpha-aminoadipate + L-cysteine + L-valine = 3 AMP + N-[L-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 diphosphate
1
LR
1
KEGG:R04870
KEGG reaction
METACYC:6.3.2.26-RXN
MetaCyc
MetaCyc REACTION
RHEA:23199
Rhea reaction
1
1
1
1
KEGG:R04872
METACYC:1.21.3.1-RXN
RHEA:22431
reaction
UPa:UCR04872
N-[L-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O(2) = 2 H(2)O + isopenicillin N
1
LR
1
KEGG:R04872
KEGG reaction
METACYC:1.21.3.1-RXN
MetaCyc
MetaCyc REACTION
RHEA:22431
Rhea reaction
1
1
1
1
KEGG:R05046
reaction
UPa:UCR05046
H(2)O + formamidopyrimidine nucleoside triphosphate = 2,5-diaminopyrimidine nucleoside triphosphate + formate
1
LR
2
KEGG:R05046
KEGG reaction
1
1
KEGG:R05048
reaction
UPa:UCR05048
2,5-diaminopyrimidine nucleoside triphosphate = 2,5-diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine
1
LR
3
KEGG:R05048
KEGG reaction
1
1
1
1
1
1
KEGG:R05049
METACYC:SUCCGLUALDDEHYD-RXN
RHEA:10815
reaction
UPa:UCR05049
H(2)O + N-succinyl-L-glutamate 5-semialdehyde + NAD(+) = H(+) + N(2)-succinyl-L-glutamic acid + NADH
1
LR
1
KEGG:R05049
KEGG reaction
METACYC:SUCCGLUALDDEHYD-RXN
Rhea
MetaCyc REACTION
RHEA:10815
Rhea reaction
1
1
1
1
1
KEGG:R05068
reaction
UPa:UCR05068
(2R,3R)-2,3-dihydroxy-3-methylpentanoic acid + NADP(+) = (R)-3-hydroxy-3-methyl-2-oxopentanoate + H(+) + NADPH
1
RL
2
KEGG:R05068
KEGG reaction
1
1
KEGG:R05069
RHEA:25407
reaction
UPa:UCR05069
(S)-2-acetyl-2-hydroxybutanoic acid = (R)-3-hydroxy-3-methyl-2-oxopentanoate
1
LR
1
KEGG:R05069
KEGG reaction
RHEA:25407
Rhea reaction
1
1
1
KEGG:R05070
METACYC:DIHYDROXYMETVALDEHYDRAT-RXN
RHEA:27697
reaction
UPa:UCR05070
(2R,3R)-2,3-dihydroxy-3-methylpentanoic acid = (S)-3-methyl-2-oxopentanoate + H(2)O
1
LR
1
KEGG:R05070
KEGG reaction
METACYC:DIHYDROXYMETVALDEHYDRAT-RXN
MetaCyc
MetaCyc REACTION
RHEA:27697
Rhea reaction
1
1
KEGG:R05071
METACYC:2-ACETOLACTATE-MUTASE-RXN
RHEA:31258
reaction
UPa:UCR05071
(S)-2-acetolactate = 2-oxo-3-hydroxyisovalerate
1
LR
1
KEGG:R05071
KEGG reaction
METACYC:2-ACETOLACTATE-MUTASE-RXN
Rhea
MetaCyc REACTION
RHEA:31258
Rhea reaction
1
1
1
1
KEGG:R05074
METACYC:KDOTRANS2-RXN
RHEA:28065
reaction
UPa:UCR05074
3-deoxy-D-manno-octulosonyl-lipid IV((A)) + CMP-3-deoxy-D-manno-octulosonate = CMP + di[3-deoxy-D-manno-octulosonyl]-lipid IV(A)
1
LR
1
KEGG:R05074
KEGG reaction
METACYC:KDOTRANS2-RXN
MetaCyc
MetaCyc REACTION
RHEA:28065
Rhea reaction
1
1
1
1
KEGG:R05075
RHEA:28441
reaction
UPa:UCR05075
lauroyl-KDO(2)-lipid IV(A) + tetradecanoyl-[acp] = KDO(2)-lipid A + acyl-carrier protein
1
LR
1
KEGG:R05075
KEGG reaction
RHEA:28441
Rhea reaction
1
1
1
1
KEGG:R05085
METACYC:PSERTRANSAMPYR-RXN
RHEA:16576
reaction
UPa:UCR05085
2-oxoglutarate + 4-(phosphonooxy)-L-threonine = (R)-3-hydroxy-2-oxo-4-phosphonooxybutanoic acid + L-glutamate
1
RL
1
KEGG:R05085
KEGG reaction
METACYC:PSERTRANSAMPYR-RXN
Rhea
MetaCyc REACTION
RHEA:16576
Rhea reaction
1
1
1
1
KEGG:R05123
METACYC:2.1.1.128-RXN
RHEA:31910
reaction
UPa:UCR05123
(S)-norcoclaurine + S-adenosyl-L-methionine = (S)-coclaurine + S-adenosyl-L-homocysteine
1
LR
1
KEGG:R05123
KEGG reaction
METACYC:2.1.1.128-RXN
MetaCyc
MetaCyc REACTION
RHEA:31910
Rhea reaction
1
1
1
1
KEGG:R05146
RHEA:28445
reaction
UPa:UCR05146
di[3-deoxy-D-manno-octulosonyl]-lipid IV(A) + dodecanoyl-[acyl-carrier protein] = acyl-carrier protein + lauroyl-KDO(2)-lipid IV(A)
1
LR
1
KEGG:R05146
KEGG reaction
RHEA:28445
Rhea reaction
1
1
1
1
1
KEGG:R05149
METACYC:2.1.1.132-RXN
RHEA:17480
reaction
UPa:UCR05149
2 S-adenosyl-L-methionine + precorrin-6B = CO(2) + 2 S-adenosyl-L-homocysteine + precorrin-8X
1
LR
1
KEGG:R05149
KEGG reaction
METACYC:2.1.1.132-RXN
Rhea
MetaCyc REACTION
RHEA:17480
Rhea reaction
1
1
1
1
1
KEGG:R05150
METACYC:1.3.1.54-RXN
RHEA:23411
reaction
UPa:UCR05150
NADP(+) + precorrin-6B = H(+) + NADPH + precorrin-6A
1
RL
1
KEGG:R05150
KEGG reaction
METACYC:1.3.1.54-RXN
Rhea
MetaCyc REACTION
RHEA:23411
Rhea reaction
1
1
KEGG:R05176
METACYC:5.1.3.20-RXN
RHEA:17580
reaction
UPa:UCR05176
ADP-D-glycero-beta-D-manno-heptose = ADP-L-glycero-beta-D-manno-heptose
1
LR
1
KEGG:R05176
KEGG reaction
METACYC:5.1.3.20-RXN
MetaCyc
MetaCyc REACTION
RHEA:17580
Rhea reaction
1
1
KEGG:R05177
METACYC:5.4.1.2-RXN
RHEA:22515
reaction
UPa:UCR05177
precorrin-8X = hydrogenobyrinic acid
1
LR
1
KEGG:R05177
KEGG reaction
METACYC:5.4.1.2-RXN
Rhea
MetaCyc REACTION
RHEA:22515
Rhea reaction
1
1
1
1
KEGG:R05180
METACYC:2.1.1.131-RXN
RHEA:12764
reaction
UPa:UCR05180
S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4
1
LR
1
KEGG:R05180
KEGG reaction
METACYC:2.1.1.131-RXN
Rhea
MetaCyc REACTION
RHEA:12764
Rhea reaction
1
1
1
1
KEGG:R05181
METACYC:2.1.1.133-RXN
RHEA:22015
reaction
UPa:UCR05181
S-adenosyl-L-methionine + precorrin-4 = S-adenosyl-L-homocysteine + precorrin-5
1
LR
1
KEGG:R05181
KEGG reaction
METACYC:2.1.1.133-RXN
MetaCyc
MetaCyc REACTION
RHEA:22015
Rhea reaction
1
1
1
1
1
1
1
KEGG:R05217
METACYC:R321-RXN
RHEA:17296
reaction
UPa:UCR05217
H(+) + NADH + O(2) + precorrin-3A = H(2)O + NAD(+) + precorrin-3B
1
LR
1
KEGG:R05217
KEGG reaction
METACYC:R321-RXN
MetaCyc
MetaCyc REACTION
RHEA:17296
Rhea reaction
1
1
1
1
1
KEGG:R05218
METACYC:R343-RXN
RHEA:24303
reaction
UPa:UCR05218
FMNH(2) + 2 cob(II)yrinate a,c-diamide = FMN + 2 H(+) + 2 cob(I)yrinic acid a,c-diamide
1
LR
1
KEGG:R05218
KEGG reaction
METACYC:R343-RXN
MetaCyc
MetaCyc REACTION
RHEA:24303
Rhea reaction
1
1
1
1
1
1
KEGG:R05219
METACYC:R322-RXN
RHEA:18264
reaction
UPa:UCR05219
S-adenosyl-L-homocysteine + acetate + precorrin-6A = H(2)O + S-adenosyl-L-methionine + precorrin-5
1
RL
1
KEGG:R05219
KEGG reaction
METACYC:R322-RXN
MetaCyc
MetaCyc REACTION
RHEA:18264
Rhea reaction
1
1
1
1
KEGG:R05220
METACYC:R344-RXN
RHEA:11531
reaction
UPa:UCR05220
ATP + cob(I)yrinic acid a,c-diamide = adenosylcob(III)yrinic acid a,c-diamide + triphosphate
1
LR
1
KEGG:R05220
KEGG reaction
METACYC:R344-RXN
MetaCyc
MetaCyc REACTION
RHEA:11531
Rhea reaction
1
1
1
1
KEGG:R05221
METACYC:COBINAMIDEKIN-RXN
RHEA:15772
reaction
UPa:UCR05221
ATP + adenosylcobinamide = ADP + adenosylcobinamide phosphate
1
LR
1
KEGG:R05221
KEGG reaction
METACYC:COBINAMIDEKIN-RXN
Rhea
MetaCyc REACTION
RHEA:15772
Rhea reaction
1
1
1
1
KEGG:R05222
METACYC:COBINPGUANYLYLTRANS-RXN
RHEA:22715
reaction
UPa:UCR05222
GTP + adenosylcobinamide phosphate = adenosylcobinamide-GDP + diphosphate
1
LR
1
KEGG:R05222
KEGG reaction
METACYC:COBINPGUANYLYLTRANS-RXN
Rhea
MetaCyc REACTION
RHEA:22715
Rhea reaction
1
1
1
1
KEGG:R05223
METACYC:COBALAMINSYN-RXN
RHEA:16052
reaction
UPa:UCR05223
GMP + adenosylcobalamin = adenosylcobinamide-GDP + alpha-ribazole
1
RL
1
KEGG:R05223
KEGG reaction
METACYC:COBALAMINSYN-RXN
Rhea
MetaCyc REACTION
RHEA:16052
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R05224
METACYC:R341-RXN
RHEA:12547
reaction
UPa:UCR05224
2 ATP + 2 H(2)O + 2 L-glutamine + hydrogenobyrinic acid = 2 ADP + 2 L-glutamate + hydrogenobyrinic acid a,c-diamide + 2 phosphate
1
LR
1
KEGG:R05224
KEGG reaction
METACYC:R341-RXN
Rhea
MetaCyc REACTION
RHEA:12547
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R05225
METACYC:R345-RXN
RHEA:23259
reaction
UPa:UCR05225
4 ATP + 4 H(2)O + 4 L-glutamine + adenosylcob(III)yrinic acid a,c-diamide = 4 ADP + 4 L-glutamate + adenosylcobyrinic acid a,c-diamide + 4 phosphate
1
LR
1
KEGG:R05225
KEGG reaction
METACYC:R345-RXN
Rhea
MetaCyc REACTION
RHEA:23259
Rhea reaction
1
1
1
1
KEGG:R05226
METACYC:R346-RXN
RHEA:23507
reaction
UPa:UCR05226
(R)-1-aminopropan-2-ol + adenosylcobyrinic acid a,c-diamide = H(2)O + adenosylcobinamide
1
LR
1
KEGG:R05226
KEGG reaction
METACYC:R346-RXN
MetaCyc
MetaCyc REACTION
RHEA:23507
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R05227
METACYC:R342-RXN
RHEA:15344
reaction
UPa:UCR05227
ATP + Co(2+) + H(2)O + hydrogenobyrinic acid a,c-diamide = ADP + H(+) + cob(II)yrinate a,c-diamide + phosphate
1
LR
1
KEGG:R05227
KEGG reaction
METACYC:R342-RXN
MetaCyc
MetaCyc REACTION
RHEA:15344
Rhea reaction
1
1
1
1
1
KEGG:R05239
METACYC:1.3.1.56-RXN
RHEA:17036
reaction
UPa:UCR05239
NAD(+) + cis-3-phenylcyclohexa-3,5-diene-1,2-diol = H(+) + NADH + biphenyl-2,3-diol
1
LR
1
KEGG:R05239
KEGG reaction
METACYC:1.3.1.56-RXN
MetaCyc
MetaCyc REACTION
RHEA:17036
Rhea reaction
1
1
1
1
1
KEGG:R05240
METACYC:RXN-665
RHEA:23775
reaction
UPa:UCR05240
NAD(+) + cis-2,3-dihydroxy-2,3-dihydro-p-cumic acid = 2,3-dihydroxy-p-cumic acid + H(+) + NADH
1
LR
1
KEGG:R05240
KEGG reaction
METACYC:RXN-665
Rhea
MetaCyc REACTION
RHEA:23775
Rhea reaction
1
1
1
1
1
1
KEGG:R05247
METACYC:RXN-664
RHEA:42347
reaction
UPa:UCR05247
H(+) + NADH + O(2) + p-cumate = NAD(+) + cis-2,3-dihydroxy-2,3-dihydro-p-cumic acid
1
LR
1
KEGG:R05247
KEGG reaction
METACYC:RXN-664
MetaCyc
MetaCyc REACTION
RHEA:42347
Rhea reaction
1
1
1
KEGG:R05248
METACYC:RXN-666
RHEA:42571
reaction
UPa:UCR05248
2,3-dihydroxy-p-cumic acid + O(2) = 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoic acid
1
LR
1
KEGG:R05248
KEGG reaction
METACYC:RXN-666
MetaCyc
MetaCyc REACTION
RHEA:42571
Rhea reaction
1
1
1
1
1
1
KEGG:R05263
METACYC:1.14.12.18-RXN
RHEA:18168
reaction
UPa:UCR05263
H(+) + NADH + O(2) + biphenyl = NAD(+) + cis-3-phenylcyclohexa-3,5-diene-1,2-diol
1
LR
1
KEGG:R05263
KEGG reaction
METACYC:1.14.12.18-RXN
MetaCyc
MetaCyc REACTION
RHEA:18168
Rhea reaction
1
1
1
1
1
KEGG:R05275
METACYC:1.3.1.64-RXN
RHEA:13840
reaction
UPa:UCR05275
NAD(+) + cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylic acid = 4,5-dihydroxyphthalate + H(+) + NADH
1
LR
1
KEGG:R05275
KEGG reaction
METACYC:1.3.1.64-RXN
Rhea
MetaCyc REACTION
RHEA:13840
Rhea reaction
1
1
1
1
KEGG:R05284
METACYC:DHLAXANAU-RXN
RHEA:25188
reaction
UPa:UCR05284
1,2-dichloroethane + H(2)O = 2-chloroethanol + HCl
1
LR
1
KEGG:R05284
KEGG reaction
METACYC:DHLAXANAU-RXN
MetaCyc
MetaCyc REACTION
RHEA:25188
Rhea reaction
1
1
1
1
1
KEGG:R05285
reaction
UPa:UCR05285
2-chloroethanol + 2 ferricytochrome c = 2 H(+) + chloroacetaldehyde + 2 ferrocytochrome c
1
LR
1
KEGG:R05285
KEGG reaction
1
1
1
1
1
1
KEGG:R05286
METACYC:ALDXANAU-RXN
RHEA:30050
reaction
UPa:UCR05286
H(2)O + NAD(+) + chloroacetaldehyde = H(+) + NADH + chloroacetic acid
1
LR
1
KEGG:R05286
KEGG reaction
METACYC:ALDXANAU-RXN
MetaCyc
MetaCyc REACTION
RHEA:30050
Rhea reaction
1
1
1
1
KEGG:R05287
METACYC:DHLBXANAU-RXN
RHEA:25192
reaction
UPa:UCR05287
H(2)O + chloroacetic acid = HCl + glycolate
1
LR
1
KEGG:R05287
KEGG reaction
METACYC:DHLBXANAU-RXN
MetaCyc
MetaCyc REACTION
RHEA:25192
Rhea reaction
1
1
1
1
1
1
1
KEGG:R05320
METACYC:RXN0-299
RHEA:15912
reaction
UPa:UCR05320
2-oxoglutarate + O(2) + taurine = CO(2) + aminoacetaldehyde + succinate + sulfite
1
LR
1
KEGG:R05320
KEGG reaction
METACYC:RXN0-299
MetaCyc
MetaCyc REACTION
RHEA:15912
Rhea reaction
1
1
1
1
KEGG:R05332
METACYC:2.3.1.157-RXN
RHEA:13728
reaction
UPa:UCR05332
acetyl-CoA + alpha-D-glucosamine 1-phosphate = CoA + N-acetyl-alpha-D-glucosamine 1-phosphate
1
LR
1
KEGG:R05332
KEGG reaction
METACYC:2.3.1.157-RXN
MetaCyc
MetaCyc REACTION
RHEA:13728
Rhea reaction
1
1
1
KEGG:R05338
METACYC:R10-RXN
RHEA:25204
reaction
UPa:UCR05338
D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate
1
LR
1
KEGG:R05338
KEGG reaction
METACYC:R10-RXN
MetaCyc
MetaCyc REACTION
RHEA:25204
Rhea reaction
1
1
KEGG:R05339
METACYC:R12-RXN
RHEA:25903
reaction
UPa:UCR05339
D-arabino-3-hexulose 6-phosphate = D-fructose 6-phosphate
1
LR
1
KEGG:R05339
KEGG reaction
METACYC:R12-RXN
MetaCyc
MetaCyc REACTION
RHEA:25903
Rhea reaction
1
1
1
1
KEGG:R05357
METACYC:3.5.3.22-RXN
RHEA:17004
reaction
UPa:UCR05357
H(2)O + amidinoproclavaminic acid = proclavaminic acid + urea
1
LR
1
KEGG:R05357
KEGG reaction
METACYC:3.5.3.22-RXN
Rhea
MetaCyc REACTION
RHEA:17004
Rhea reaction
1
1
1
1
KEGG:R05360
METACYC:R608-RXN
RHEA:42471
reaction
UPa:UCR05360
2-hydroxy-6-(2-hydroxyphenyl)-6-oxo-cis,cis-hexa-2,4-dienoic acid + H(2)O = 2-hydroxy-2,4-pentadienoate + salicylate
1
LR
1
KEGG:R05360
KEGG reaction
METACYC:R608-RXN
MetaCyc
MetaCyc REACTION
RHEA:42471
Rhea reaction
1
1
1
1
KEGG:R05361
RHEA:42483
reaction
UPa:UCR05361
2-hydroxy-6-(2-hydroxyphenoxy)-6-oxo-cis,cis-hexa-2,4-dienoic acid + H(2)O = 2-hydroxymuconate + catechol
1
LR
1
KEGG:R05361
KEGG reaction
RHEA:42483
Rhea reaction
1
1
1
1
KEGG:R05364
METACYC:RXN-668
RHEA:42579
reaction
UPa:UCR05364
2-hydroxy-6-oxo-7-methylocta-2,4-dienoic acid + H(2)O = 2-hydroxy-2,4-pentadienoate + 2-methylpropanoate
1
LR
1
KEGG:R05364
KEGG reaction
METACYC:RXN-668
Rhea
MetaCyc REACTION
RHEA:42579
Rhea reaction
1
1
1
KEGG:R05377
METACYC:RXN-667
RHEA:42575
reaction
UPa:UCR05377
2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoic acid = 2-hydroxy-6-oxo-7-methylocta-2,4-dienoic acid + CO(2)
1
LR
1
KEGG:R05377
KEGG reaction
METACYC:RXN-667
Rhea
MetaCyc REACTION
RHEA:42575
Rhea reaction
1
1
1
KEGG:R05378
METACYC:4.1.2.29-RXN
RHEA:13180
reaction
UPa:UCR05378
6-phospho-5-dehydro-2-deoxy-D-gluconic acid = 3-oxopropanoate + glycerone phosphate
1
LR
1
KEGG:R05378
KEGG reaction
METACYC:4.1.2.29-RXN
MetaCyc
MetaCyc REACTION
RHEA:13180
Rhea reaction
1
1
1
KEGG:R05411
METACYC:R607-RXN
RHEA:42467
reaction
UPa:UCR05411
O(2) + biphenyl-2,2',3-triol = 2-hydroxy-6-(2-hydroxyphenyl)-6-oxo-cis,cis-hexa-2,4-dienoic acid
1
LR
1
KEGG:R05411
KEGG reaction
METACYC:R607-RXN
MetaCyc
MetaCyc REACTION
RHEA:42467
Rhea reaction
1
1
1
KEGG:R05413
METACYC:R604-RXN
RHEA:42479
reaction
UPa:UCR05413
2,2',3-trihydroxy-diphenyl ether + O(2) = 2-hydroxy-6-(2-hydroxyphenoxy)-6-oxo-cis,cis-hexa-2,4-dienoic acid
1
LR
1
KEGG:R05413
KEGG reaction
METACYC:R604-RXN
MetaCyc
MetaCyc REACTION
RHEA:42479
Rhea reaction
1
1
1
1
1
1
KEGG:R05434
METACYC:R606-RXN
RHEA:42463
reaction
UPa:UCR05434
H(+) + NADH + O(2) + dibenzofuran = NAD(+) + biphenyl-2,2',3-triol
1
LR
1
KEGG:R05434
KEGG reaction
METACYC:R606-RXN
MetaCyc
MetaCyc REACTION
RHEA:42463
Rhea reaction
1
1
1
1
1
1
KEGG:R05439
RHEA:42475
reaction
UPa:UCR05439
H(+) + NADH + O(2) + dibenzo-p-dioxin = 2,2',3-trihydroxy-diphenyl ether + NAD(+)
1
LR
1
KEGG:R05439
KEGG reaction
RHEA:42475
Rhea reaction
1
1
1
1
KEGG:R05465
METACYC:2.5.1.66-RXN
RHEA:10559
reaction
UPa:UCR05465
D-glyceraldehyde 3-phosphate + L-arginine = N(2)-(2-carboxyethyl)-L-arginine + phosphate
1
LR
1
KEGG:R05465
KEGG reaction
METACYC:2.5.1.66-RXN
MetaCyc
MetaCyc REACTION
RHEA:10559
Rhea reaction
1
1
1
1
1
1
KEGG:R05466
METACYC:1.14.11.21-RXN
RHEA:20024
reaction
UPa:UCR05466
2-oxoglutarate + O(2) + deoxyamidinoproclavaminic acid = CO(2) + amidinoproclavaminic acid + succinate
1
LR
1
KEGG:R05466
KEGG reaction
METACYC:1.14.11.21-RXN
MetaCyc
MetaCyc REACTION
RHEA:20024
Rhea reaction
1
1
1
1
1
KEGG:R05467
METACYC:6.3.3.4-RXN
RHEA:23623
reaction
UPa:UCR05467
ATP + N(2)-(2-carboxyethyl)-L-arginine = AMP + deoxyamidinoproclavaminic acid + diphosphate
1
LR
1
KEGG:R05467
KEGG reaction
METACYC:6.3.3.4-RXN
MetaCyc
MetaCyc REACTION
RHEA:23623
Rhea reaction
1
1
1
1
1
1
1
KEGG:R05468
METACYC:RXN-6266
RHEA:12776
RHEA:19788
reaction
UPa:UCR05468
2-oxoglutarate + O(2) + proclavaminic acid = CO(2) + H(2)O + dihydroclavaminic acid + succinate
1
LR
1
KEGG:R05468
KEGG reaction
METACYC:RXN-6266
MetaCyc
MetaCyc REACTION
RHEA:12776
Rhea reaction
RHEA:19788
Rhea reaction
1
1
1
1
1
1
1
KEGG:R05469
METACYC:RXN-6267
reaction
UPa:UCR05469
2-oxoglutarate + O(2) + dihydroclavaminic acid = CO(2) + H(2)O + clavaminate + succinate
1
LR
1
KEGG:R05469
KEGG reaction
METACYC:RXN-6267
MetaCyc
MetaCyc REACTION
1
1
KEGG:R05470
METACYC:RXN-8892
RHEA:42431
reaction
UPa:UCR05470
clavaminate = clavulanate-9-aldehyde
1
LR
1
KEGG:R05470
KEGG reaction
METACYC:RXN-8892
MetaCyc
MetaCyc REACTION
RHEA:42431
Rhea reaction
1
1
1
1
1
KEGG:R05471
METACYC:RXN-8893
RHEA:42071
reaction
UPa:UCR05471
H(+) + NADPH + clavulanate-9-aldehyde = NADP(+) + clavulanate
1
LR
1
KEGG:R05471
KEGG reaction
METACYC:RXN-8893
Rhea
MetaCyc REACTION
RHEA:42071
Rhea reaction
1
1
1
1
KEGG:R05552
reaction
UPa:UCR05552
NH(3) + chorismate = 4-amino-4-deoxychorismate + H(2)O
1
LR
1
KEGG:R05552
KEGG reaction
1
1
1
KEGG:R05553
METACYC:ADCLY-RXN
RHEA:16204
reaction
UPa:UCR05553
4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate
1
LR
1
KEGG:R05553
KEGG reaction
METACYC:ADCLY-RXN
Rhea
MetaCyc REACTION
RHEA:16204
Rhea reaction
1
1
1
1
KEGG:R05554
METACYC:URUR-RXN
RHEA:25244
reaction
UPa:UCR05554
2-ureidoglycine + H(2)O = (S)-ureidoglycolate + NH(3)
1
LR
2
KEGG:R05554
KEGG reaction
METACYC:URUR-RXN
MetaCyc
MetaCyc REACTION
RHEA:25244
Rhea reaction
1
1
1
1
KEGG:R05558
METACYC:3.8.1.8-RXN
RHEA:11315
reaction
UPa:UCR05558
H(2)O + atrazine = HCl + hydroxyatrazine
1
LR
1
KEGG:R05558
KEGG reaction
METACYC:3.8.1.8-RXN
MetaCyc
MetaCyc REACTION
RHEA:11315
Rhea reaction
1
1
1
1
KEGG:R05559
METACYC:R122-RXN
RHEA:23095
reaction
UPa:UCR05559
H(2)O + hydroxyatrazine = N-isopropylammelide + ethylamine
1
LR
1
KEGG:R05559
KEGG reaction
METACYC:R122-RXN
MetaCyc
MetaCyc REACTION
RHEA:23095
Rhea reaction
1
1
1
1
KEGG:R05560
METACYC:R123-RXN
RHEA:23611
reaction
UPa:UCR05560
H(2)O + N-isopropylammelide = cyanurate + isopropylamine
1
LR
1
KEGG:R05560
KEGG reaction
METACYC:R123-RXN
MetaCyc
MetaCyc REACTION
RHEA:23611
Rhea reaction
1
1
1
KEGG:R05605
METACYC:KDPGALDOL-RXN
RHEA:17092
reaction
UPa:UCR05605
2-dehydro-3-deoxy-6-phospho-D-gluconic acid = D-glyceraldehyde 3-phosphate + pyruvate
1
LR
1
KEGG:R05605
KEGG reaction
METACYC:KDPGALDOL-RXN
MetaCyc
MetaCyc REACTION
RHEA:17092
Rhea reaction
1
1
1
KEGG:R05608
METACYC:GALACTARDEHYDRA-RXN
RHEA:16008
reaction
UPa:UCR05608
galactarate = 5-dehydro-4-deoxy-D-glucarate + H(2)O
1
LR
1
KEGG:R05608
KEGG reaction
METACYC:GALACTARDEHYDRA-RXN
MetaCyc
MetaCyc REACTION
RHEA:16008
Rhea reaction
1
1
1
1
1
1
KEGG:R05621
METACYC:BENZOATE-12-DIOXYGENASE-RXN
RHEA:12636
reaction
UPa:UCR05621
H(+) + NADH + O(2) + benzoate = (1R,6S)-1,6-dihydroxycyclohexa-2,4-dienecarboxylic acid + NAD(+)
1
LR
1
KEGG:R05621
KEGG reaction
METACYC:BENZOATE-12-DIOXYGENASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:12636
Rhea reaction
1
1
1
1
KEGG:R05633
METACYC:2.7.7.60-RXN
RHEA:13432
reaction
UPa:UCR05633
2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate
1
LR
1
KEGG:R05633
KEGG reaction
METACYC:2.7.7.60-RXN
Rhea
MetaCyc REACTION
RHEA:13432
Rhea reaction
1
1
1
1
KEGG:R05634
METACYC:2.7.1.148-RXN
RHEA:18440
reaction
UPa:UCR05634
4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP
1
LR
1
KEGG:R05634
KEGG reaction
METACYC:2.7.1.148-RXN
MetaCyc
MetaCyc REACTION
RHEA:18440
Rhea reaction
1
1
1
1
KEGG:R05636
METACYC:DXS-RXN
RHEA:12608
reaction
UPa:UCR05636
D-glyceraldehyde 3-phosphate + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO(2)
1
LR
1
KEGG:R05636
KEGG reaction
METACYC:DXS-RXN
MetaCyc
MetaCyc REACTION
RHEA:12608
Rhea reaction
1
1
1
KEGG:R05637
METACYC:RXN0-302
RHEA:23867
reaction
UPa:UCR05637
4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP
1
LR
1
KEGG:R05637
KEGG reaction
METACYC:RXN0-302
MetaCyc
MetaCyc REACTION
RHEA:23867
Rhea reaction
1
1
1
1
1
KEGG:R05639
METACYC:RXN66-306
RHEA:18564
reaction
UPa:UCR05639
14-demethyllanosterol + NADP(+) = 4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol + H(+) + NADPH
1
RL
1
KEGG:R05639
KEGG reaction
METACYC:RXN66-306
MetaCyc
MetaCyc REACTION
RHEA:18564
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R05640
METACYC:RXN3O-130
RHEA:25289
reaction
UPa:UCR05640
3 H(+) + 3 NADPH + 3 O(2) + lanosterol = 4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol + 4 H(2)O + 3 NADP(+) + formate
1
LR
1
KEGG:R05640
KEGG reaction
METACYC:RXN3O-130
MetaCyc
MetaCyc REACTION
RHEA:25289
Rhea reaction
1
1
1
1
1
KEGG:R05641
METACYC:1.3.1.71-RXN
RHEA:18504
reaction
UPa:UCR05641
NADP(+) + ergosterol = H(+) + NADPH + ergosta-5,7,22,24(28)-tetraen-3beta-ol
1
RL
1
KEGG:R05641
KEGG reaction
METACYC:1.3.1.71-RXN
MetaCyc
MetaCyc REACTION
RHEA:18504
Rhea reaction
1
1
1
1
KEGG:R05644
METACYC:RXN0-4342
RHEA:27468
reaction
UPa:UCR05644
ATP + D-glycero-beta-D-manno-heptose 1-phosphate = ADP-D-glycero-beta-D-manno-heptose + diphosphate
1
LR
1
KEGG:R05644
KEGG reaction
METACYC:RXN0-4342
MetaCyc
MetaCyc REACTION
RHEA:27468
Rhea reaction
1
1
1
1
KEGG:R05646
RHEA:27476
reaction
UPa:UCR05646
ATP + D-glycero-beta-D-manno-heptose 7-phosphate = ADP + D-glycero-beta-D-manno-heptose 1,7-diphosphate
1
LR
1
KEGG:R05646
KEGG reaction
RHEA:27476
Rhea reaction
1
1
1
1
KEGG:R05647
METACYC:RXN0-4361
RHEA:28521
reaction
UPa:UCR05647
D-glycero-beta-D-manno-heptose 1,7-diphosphate + H(2)O = D-glycero-beta-D-manno-heptose 1-phosphate + phosphate
1
LR
1
KEGG:R05647
KEGG reaction
METACYC:RXN0-4361
MetaCyc
MetaCyc REACTION
RHEA:28521
Rhea reaction
1
1
1
1
KEGG:R05651
METACYC:RXN-2364
RHEA:24207
reaction
UPa:UCR05651
phosphate + sulfoacetaldehyde = acetyl phosphate + sulfite
1
LR
1
KEGG:R05651
KEGG reaction
METACYC:RXN-2364
MetaCyc
MetaCyc REACTION
RHEA:24207
Rhea reaction
1
1
1
1
KEGG:R05652
METACYC:TAURINE-AMINOTRANSFERASE-RXN
RHEA:10423
reaction
UPa:UCR05652
pyruvate + taurine = L-alanine + sulfoacetaldehyde
1
LR
1
KEGG:R05652
KEGG reaction
METACYC:TAURINE-AMINOTRANSFERASE-RXN
Rhea
MetaCyc REACTION
RHEA:10423
Rhea reaction
1
1
1
1
KEGG:R05661
METACYC:5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN
RHEA:13500
reaction
UPa:UCR05661
2-deoxy-5-keto-D-gluconic acid + ATP = 6-phospho-5-dehydro-2-deoxy-D-gluconic acid + ADP
1
LR
1
KEGG:R05661
KEGG reaction
METACYC:5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN
MetaCyc
MetaCyc REACTION
RHEA:13500
Rhea reaction
1
1
1
1
1
KEGG:R05681
METACYC:1.1.1.262-RXN
RHEA:14456
reaction
UPa:UCR05681
4-(phosphonooxy)-L-threonine + NAD(+) = 2-amino-3-oxo-4-phosphonooxybutyrate + H(+) + NADH
1
LR
1
KEGG:R05681
KEGG reaction
METACYC:1.1.1.262-RXN
MetaCyc
MetaCyc REACTION
RHEA:14456
Rhea reaction
1
1
1
1
1
KEGG:R05688
METACYC:DXPREDISOM-RXN
RHEA:13720
reaction
UPa:UCR05688
2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-xylulose 5-phosphate + H(+) + NADPH
1
RL
1
KEGG:R05688
KEGG reaction
METACYC:DXPREDISOM-RXN
Rhea
MetaCyc REACTION
RHEA:13720
Rhea reaction
1
1
1
1
1
KEGG:R05692
METACYC:1.1.1.271-RXN
RHEA:18888
reaction
UPa:UCR05692
GDP-L-fucose + NADP(+) = GDP-4-dehydro-6-deoxy-D-mannose + H(+) + NADPH
1
RL
1
KEGG:R05692
KEGG reaction
METACYC:1.1.1.271-RXN
MetaCyc
MetaCyc REACTION
RHEA:18888
Rhea reaction
1
1
1
1
1
1
1
KEGG:R05728
METACYC:1.14.13.68-RXN
RHEA:18404
reaction
UPa:UCR05728
(Z)-(4-hydroxyphenyl)acetaldehyde oxime + H(+) + NADPH + O(2) = (S)-4-hydroxymandelonitrile + 2 H(2)O + NADP(+)
1
LR
1
KEGG:R05728
KEGG reaction
METACYC:1.14.13.68-RXN
MetaCyc
MetaCyc REACTION
RHEA:18404
Rhea reaction
1
1
1
1
1
1
1
KEGG:R05732
METACYC:1.14.13.71-RXN
RHEA:16652
reaction
UPa:UCR05732
(S)-N-methylcoclaurine + H(+) + NADPH + O(2) = (S)-3'-hydroxy-N-methylcoclaurine + H(2)O + NADP(+)
1
LR
1
KEGG:R05732
KEGG reaction
METACYC:1.14.13.71-RXN
MetaCyc
MetaCyc REACTION
RHEA:16652
Rhea reaction
1
1
1
KEGG:R05765
METACYC:RXN-5106
RHEA:25491
RHEA:25665
reaction
UPa:UCR05765
geranyl diphosphate = (-)-alpha-pinene + diphosphate
1
LR
1
KEGG:R05765
KEGG reaction
METACYC:RXN-5106
MetaCyc
MetaCyc REACTION
RHEA:25491
Rhea reaction
RHEA:25665
Rhea reaction
1
1
1
KEGG:R05766
METACYC:RXN-5107
RHEA:25499
RHEA:25669
reaction
UPa:UCR05766
geranyl diphosphate = (-)-beta-pinene + diphosphate
1
LR
1
KEGG:R05766
KEGG reaction
METACYC:RXN-5107
MetaCyc
MetaCyc REACTION
RHEA:25499
Rhea reaction
RHEA:25669
Rhea reaction
1
1
1
1
KEGG:R05768
METACYC:2.4.1.217-RXN
RHEA:13540
reaction
UPa:UCR05768
3-phospho-D-glycerate + GDP-alpha-D-mannose = 2-(alpha-D-mannosyl)-3-phosphoglyceric acid + GDP
1
LR
1
KEGG:R05768
KEGG reaction
METACYC:2.4.1.217-RXN
MetaCyc
MetaCyc REACTION
RHEA:13540
Rhea reaction
1
1
1
KEGG:R05774
METACYC:R231-RXN
RHEA:20951
reaction
UPa:UCR05774
3-sulfopyruvate = CO(2) + sulfoacetaldehyde
1
LR
1
KEGG:R05774
KEGG reaction
METACYC:R231-RXN
MetaCyc
MetaCyc REACTION
RHEA:20951
Rhea reaction
1
1
1
KEGG:R05784
METACYC:RXN-9412
RHEA:10703
reaction
UPa:UCR05784
(4R)-limonene 1,2-epoxide + H(2)O = (1S,2S,4R)-limonene-1,2-diol
1
LR
1
KEGG:R05784
KEGG reaction
METACYC:RXN-9412
MetaCyc
MetaCyc REACTION
RHEA:10703
Rhea reaction
1
1
1
1
KEGG:R05789
METACYC:R229-RXN
RHEA:23419
reaction
UPa:UCR05789
(2R)-O-phospho-3-sulfolactic acid + H(2)O = (R)-3-sulfolactate + phosphate
1
LR
1
KEGG:R05789
KEGG reaction
METACYC:R229-RXN
MetaCyc
MetaCyc REACTION
RHEA:23419
Rhea reaction
1
1
1
1
KEGG:R05790
METACYC:3.1.3.70-RXN
RHEA:19312
reaction
UPa:UCR05790
2-(alpha-D-mannosyl)-3-phosphoglyceric acid + H(2)O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate
1
LR
1
KEGG:R05790
KEGG reaction
METACYC:3.1.3.70-RXN
MetaCyc
MetaCyc REACTION
RHEA:19312
Rhea reaction
1
1
1
1
KEGG:R05794
METACYC:2.7.8.24-RXN
RHEA:14600
reaction
UPa:UCR05794
CDP-diacylglycerol + choline = CMP + phosphatidylcholine
1
LR
1
KEGG:R05794
KEGG reaction
METACYC:2.7.8.24-RXN
Rhea
MetaCyc REACTION
RHEA:14600
Rhea reaction
1
1
1
1
KEGG:R05807
METACYC:4.99.1.3-RXN
RHEA:15896
reaction
UPa:UCR05807
Co(2+) + sirohydrochlorin = 2 H(+) + cobalt-precorrin-2
1
LR
1
KEGG:R05807
KEGG reaction
METACYC:4.99.1.3-RXN
Rhea
MetaCyc REACTION
RHEA:15896
Rhea reaction
1
1
1
1
KEGG:R05808
METACYC:2.1.1.151-RXN
RHEA:18000
reaction
UPa:UCR05808
S-adenosyl-L-methionine + cobalt-precorrin-2 = S-adenosyl-L-homocysteine + cobalt-factor III
1
LR
1
KEGG:R05808
KEGG reaction
METACYC:2.1.1.151-RXN
MetaCyc
MetaCyc REACTION
RHEA:18000
Rhea reaction
1
1
1
1
KEGG:R05809
METACYC:RXN-8761
RHEA:26276
reaction
UPa:UCR05809
S-adenosyl-L-methionine + cobalt-precorrin 3 = S-adenosyl-L-homocysteine + cobalt-precorrin 4
1
LR
1
KEGG:R05809
KEGG reaction
METACYC:RXN-8761
MetaCyc
MetaCyc REACTION
RHEA:26276
Rhea reaction
1
1
1
1
KEGG:R05810
METACYC:RXN-8762
RHEA:26280
reaction
UPa:UCR05810
S-adenosyl-L-methionine + cobalt-precorrin 4 = S-adenosyl-L-homocysteine + cobalt-precorrin 5A
1
LR
1
KEGG:R05810
KEGG reaction
METACYC:RXN-8762
MetaCyc
MetaCyc REACTION
RHEA:26280
Rhea reaction
1
1
1
1
1
KEGG:R05812
METACYC:RXN-8765
RHEA:15628
reaction
UPa:UCR05812
H(+) + NADH + cobalt-precorrin-6A = NAD(+) + cobalt-precorrin-6B
1
LR
1
KEGG:R05812
KEGG reaction
METACYC:RXN-8765
MetaCyc
MetaCyc REACTION
RHEA:15628
Rhea reaction
1
1
1
1
1
KEGG:R05813
reaction
UPa:UCR05813
2 S-adenosyl-L-methionine + cobalt-precorrin-6B = CO(2) + 2 S-adenosyl-L-homocysteine + cobalt-precorrin 8
1
LR
1
KEGG:R05813
KEGG reaction
1
1
KEGG:R05814
METACYC:RXN-8768
RHEA:16212
reaction
UPa:UCR05814
cobalt-precorrin 8 = cob(III)yrinic acid
1
LR
1
KEGG:R05814
KEGG reaction
METACYC:RXN-8768
MetaCyc
MetaCyc REACTION
RHEA:16212
Rhea reaction
1
1
1
1
1
1
1
1
KEGG:R05815
METACYC:RXN-8769
RHEA:26292
reaction
UPa:UCR05815
2 ATP + 2 H(2)O + 2 L-glutamine + cob(III)yrinic acid = 2 ADP + 2 L-glutamate + cob(II)yrinate a,c-diamide + 2 phosphate
1
LR
1
KEGG:R05815
KEGG reaction
METACYC:RXN-8769
MetaCyc
MetaCyc REACTION
RHEA:26292
Rhea reaction
1
1
1
1
KEGG:R05820
RHEA:42487
reaction
UPa:UCR05820
D-sorbitol + protein N(pi)-phospho-L-histidine = D-sorbitol 6-phosphate + protein-L-histidine
1
LR
1
KEGG:R05820
KEGG reaction
RHEA:42487
Rhea reaction
1
1
1
1
1
KEGG:R05838
METACYC:PDXJ-RXN
RHEA:15268
reaction
UPa:UCR05838
1-deoxy-D-xylulose 5-phosphate + 3-amino-2-oxopropyl phosphate = 2 H(2)O + phosphate + pyridoxine 5'-phosphate
1
LR
1
KEGG:R05838
KEGG reaction
METACYC:PDXJ-RXN
MetaCyc
MetaCyc REACTION
RHEA:15268
Rhea reaction
1
1
KEGG:R05850
METACYC:RIBULPEPIM-RXN
RHEA:22371
reaction
UPa:UCR05850
L-ribulose 5-phosphate = D-xylulose 5-phosphate
1
1
LR
1
LR
1
KEGG:R05850
KEGG reaction
METACYC:RIBULPEPIM-RXN
Rhea
MetaCyc REACTION
RHEA:22371
Rhea reaction
1
1
1
1
1
1
1
KEGG:R05855
METACYC:1.14.13.73-RXN
RHEA:14136
reaction
UPa:UCR05855
H(+) + NADPH + O(2) + tabersonine = 16-hydroxytabersonine + H(2)O + NADP(+)
1
LR
1
KEGG:R05855
KEGG reaction
METACYC:1.14.13.73-RXN
MetaCyc
MetaCyc REACTION
RHEA:14136
Rhea reaction
1
1
1
KEGG:R05856
METACYC:RXN-8200
RHEA:42375
reaction
UPa:UCR05856
16-methoxytabersonine + H(2)O = 3-hydroxy-16-methoxy-2,3-dihydrotabersonine
1
LR
1
KEGG:R05856
KEGG reaction
METACYC:RXN-8200
MetaCyc
MetaCyc REACTION
RHEA:42375
Rhea reaction
1
1
1
1
1
1
KEGG:R05857
METACYC:1.14.11.20-RXN
RHEA:18976
reaction
UPa:UCR05857
2-oxoglutarate + O(2) + desacetoxyvindoline = CO(2) + deacetylvindoline + succinate
1
LR
1
KEGG:R05857
KEGG reaction
METACYC:1.14.11.20-RXN
MetaCyc
MetaCyc REACTION
RHEA:18976
Rhea reaction
1
1
1
1
1
1
KEGG:R05884
METACYC:ISPH2-RXN
RHEA:24491
reaction
UPa:UCR05884
(2E)-4-hydroxy-3-methylbutenyl diphosphate + H(+) + NADPH = H(2)O + NADP(+) + isopentenyl diphosphate
1
LR
1
KEGG:R05884
KEGG reaction
METACYC:ISPH2-RXN
MetaCyc
MetaCyc REACTION
RHEA:24491
Rhea reaction
1
1
1
1
1
KEGG:R05885
METACYC:2.1.1.94-RXN
RHEA:20995
reaction
UPa:UCR05885
16-hydroxytabersonine + S-adenosyl-L-methionine = 16-methoxytabersonine + H(+) + S-adenosyl-L-homocysteine
1
LR
1
KEGG:R05885
KEGG reaction
METACYC:2.1.1.94-RXN
MetaCyc
MetaCyc REACTION
RHEA:20995
Rhea reaction
1
1
1
1
1
KEGG:R06117
METACYC:RXN-9397
RHEA:14828
reaction
UPa:UCR06117
(4S,6R)-trans-carveol + NAD(+) = (S)-carvone + H(+) + NADH
1
LR
1
KEGG:R06117
KEGG reaction
METACYC:RXN-9397
MetaCyc
MetaCyc REACTION
RHEA:14828
Rhea reaction
1
1
1
1
1
1
1
KEGG:R06119
METACYC:RXN-10746
RHEA:18960
reaction
UPa:UCR06119
(4R)-limonene + H(+) + NADPH + O(2) = (4S,6R)-trans-carveol + H(2)O + NADP(+)
1
LR
1
KEGG:R06119
KEGG reaction
METACYC:RXN-10746
MetaCyc
MetaCyc REACTION
RHEA:18960
Rhea reaction
1
1
1
KEGG:R06120
METACYC:4.2.3.20-RXN
RHEA:10943
reaction
UPa:UCR06120
geranyl diphosphate = (4R)-limonene + diphosphate
1
LR
1
KEGG:R06120
KEGG reaction
METACYC:4.2.3.20-RXN
MetaCyc
MetaCyc REACTION
RHEA:10943
Rhea reaction
1
1
1
KEGG:R06171
METACYC:LTAA-RXN
RHEA:26212
reaction
UPa:UCR06171
L-allo-threonine = acetaldehyde + glycine
1
LR
1
KEGG:R06171
KEGG reaction
METACYC:LTAA-RXN
Rhea
MetaCyc REACTION
RHEA:26212
Rhea reaction
1
1
1
1
1
KEGG:R06180
METACYC:TARTRATE-DEHYDROGENASE-RXN
RHEA:15212
reaction
UPa:UCR06180
L-tartrate + NAD(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADH
1
LR
1
KEGG:R06180
KEGG reaction
METACYC:TARTRATE-DEHYDROGENASE-RXN
Rhea
MetaCyc REACTION
RHEA:15212
Rhea reaction
1
1
1
1
1
1
KEGG:R06223
RHEA:32298
reaction
UPa:UCR06223
H(+) + NADPH + 2 farnesyl diphosphate = NADP(+) + 2 diphosphate + squalene
1
LR
1
KEGG:R06223
KEGG reaction
RHEA:32298
Rhea reaction
1
1
1
KEGG:R06305
METACYC:4.2.3.17-RXN
RHEA:20915
reaction
UPa:UCR06305
geranylgeranyl diphosphate = diphosphate + taxa-4,11-diene
1
LR
1
KEGG:R06305
KEGG reaction
METACYC:4.2.3.17-RXN
Rhea
MetaCyc REACTION
RHEA:20915
Rhea reaction
1
1
1
1
1
1
KEGG:R06306
METACYC:1.14.99.37-RXN
RHEA:14052
reaction
UPa:UCR06306
O(2) + reduced acceptor + taxa-4,11-diene = H(2)O + acceptor + taxa-4(20),11-dien-5alpha-ol
1
LR
1
KEGG:R06306
KEGG reaction
METACYC:1.14.99.37-RXN
MetaCyc
MetaCyc REACTION
RHEA:14052
Rhea reaction
1
1
1
1
KEGG:R06307
METACYC:2.3.1.162-RXN
RHEA:22031
reaction
UPa:UCR06307
acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate
1
LR
1
KEGG:R06307
KEGG reaction
METACYC:2.3.1.162-RXN
Rhea
MetaCyc REACTION
RHEA:22031
Rhea reaction
1
1
1
1
1
1
1
KEGG:R06309
METACYC:1.14.13.76-RXN
RHEA:15244
reaction
UPa:UCR06309
H(+) + NADPH + O(2) + taxa-4(20),11-dien-5alpha-yl acetate = 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + H(2)O + NADP(+)
1
LR
1
KEGG:R06309
KEGG reaction
METACYC:1.14.13.76-RXN
MetaCyc
MetaCyc REACTION
RHEA:15244
Rhea reaction
1
1
1
1
KEGG:R06310
METACYC:2.3.1.166-RXN
RHEA:18744
reaction
UPa:UCR06310
10-deacetyl-2-debenzoylbaccatin III + benzoyl-CoA = 10-deacetylbaccatin III + CoA
1
LR
1
KEGG:R06310
KEGG reaction
METACYC:2.3.1.166-RXN
MetaCyc
MetaCyc REACTION
RHEA:18744
Rhea reaction
1
1
1
1
KEGG:R06311
METACYC:2.3.1.167-RXN
RHEA:20140
reaction
UPa:UCR06311
10-deacetylbaccatin III + acetyl-CoA = CoA + baccatin III
1
LR
1
KEGG:R06311
KEGG reaction
METACYC:2.3.1.167-RXN
MetaCyc
MetaCyc REACTION
RHEA:20140
Rhea reaction
1
1
1
1
KEGG:R06372
METACYC:RXN-9419
RHEA:32430
reaction
UPa:UCR06372
(S)-carvone + reduced acceptor = (1R,4S)-isodihydrocarvone + acceptor
1
LR
1
KEGG:R06372
KEGG reaction
METACYC:RXN-9419
MetaCyc
MetaCyc REACTION
RHEA:32430
Rhea reaction
1
1
1
1
1
1
1
KEGG:R06398
RHEA:26096
reaction
UPa:UCR06398
(4R)-limonene + H(+) + NADH + O(2) = (4R)-limonene 1,2-epoxide + H(2)O + NAD(+)
1
LR
1
KEGG:R06398
KEGG reaction
RHEA:26096
Rhea reaction
1
1
1
1
1
KEGG:R06399
METACYC:RXN-9949
RHEA:32386
reaction
UPa:UCR06399
(1S,2S,4R)-limonene-1,2-diol + NAD(+) = (1S,4R)-1-hydroxylimonen-2-one + H(+) + NADH
1
LR
1
KEGG:R06399
KEGG reaction
METACYC:RXN-9949
Rhea
MetaCyc REACTION
RHEA:32386
Rhea reaction
1
1
1
1
KEGG:R06558
METACYC:RXN-14063
RHEA:15768
reaction
UPa:UCR06558
GTP + adenosylcobinamide = GDP + adenosylcobinamide phosphate
1
LR
1
KEGG:R06558
KEGG reaction
METACYC:RXN-14063
MetaCyc
Rhea
MetaCyc REACTION
RHEA:15768
Rhea reaction
1
1
1
KEGG:R06601
METACYC:3.5.2.17-RXN
RHEA:23739
reaction
UPa:UCR06601
5-hydroxyisouric acid + H(2)O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylic acid
1
LR
1
KEGG:R06601
KEGG reaction
METACYC:3.5.2.17-RXN
MetaCyc
MetaCyc REACTION
RHEA:23739
Rhea reaction
1
1
1
KEGG:R06604
METACYC:RXN-6201
reaction
UPa:UCR06604
5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylic acid = (S)-allantoin + CO(2)
1
LR
1
KEGG:R06604
KEGG reaction
METACYC:RXN-6201
MetaCyc
MetaCyc REACTION
1
1
1
1
1
1
KEGG:R06782
METACYC:HCAMULTI-RXN
RHEA:20360
reaction
UPa:UCR06782
3-phenylpropanoate + H(+) + NADH + O(2) = NAD(+) + cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol
1
LR
1
KEGG:R06782
KEGG reaction
METACYC:HCAMULTI-RXN
Rhea
MetaCyc REACTION
RHEA:20360
Rhea reaction
1
1
1
1
1
KEGG:R06784
METACYC:PHENPRODIOLDEHYDROG-RXN
RHEA:25065
reaction
UPa:UCR06784
NAD(+) + cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol = 3-(2,3-dihydroxyphenyl)propanoate + H(+) + NADH
1
LR
1
KEGG:R06784
KEGG reaction
METACYC:PHENPRODIOLDEHYDROG-RXN
Rhea
MetaCyc REACTION
RHEA:25065
Rhea reaction
1
1
1
1
1
1
1
KEGG:R06786
METACYC:MHPHYDROXY-RXN
RHEA:24788
reaction
UPa:UCR06786
3-(3-hydroxyphenyl)propanoate + H(+) + NADH + O(2) = 3-(2,3-dihydroxyphenyl)propanoate + H(2)O + NAD(+)
1
LR
1
KEGG:R06786
KEGG reaction
METACYC:MHPHYDROXY-RXN
Rhea
MetaCyc REACTION
RHEA:24788
Rhea reaction
1
1
1
1
KEGG:R06836
METACYC:RXN0-1401
RHEA:20112
reaction
UPa:UCR06836
ATP + D-ribose 1,5-bisphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + ADP
1
LR
1
KEGG:R06836
KEGG reaction
METACYC:RXN0-1401
Rhea
MetaCyc REACTION
RHEA:20112
Rhea reaction
1
1
KEGG:R06837
reaction
UPa:UCR06837
alpha-D-ribose 1-phosphate = D-ribose 1,5-bisphosphate
1
LR
1
KEGG:R06837
KEGG reaction
1
1
1
1
KEGG:R06868
METACYC:RXN-5642
RHEA:25324
reaction
UPa:UCR06868
N-methylethanolamine phosphate + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + phosphodimethylethanolamine
1
LR
2
KEGG:R06868
KEGG reaction
METACYC:RXN-5642
MetaCyc
MetaCyc REACTION
RHEA:25324
Rhea reaction
1
1
1
1
KEGG:R06869
METACYC:RXN-5643
RHEA:25328
reaction
UPa:UCR06869
S-adenosyl-L-methionine + phosphodimethylethanolamine = S-adenosyl-L-homocysteine + phosphocholine
1
LR
3
KEGG:R06869
KEGG reaction
METACYC:RXN-5643
MetaCyc
MetaCyc REACTION
RHEA:25328
Rhea reaction
1
1
1
1
1
1
KEGG:R06895
METACYC:HEMN-RXN
RHEA:15428
reaction
UPa:UCR06895
2 S-adenosyl-L-methionine + coproporphyrinogen-III = 2 5'-deoxyadenosine + 2 CO(2) + 2 L-methionine + protoporphyrinogen-IX
1
LR
1
KEGG:R06895
KEGG reaction
METACYC:HEMN-RXN
MetaCyc
MetaCyc REACTION
RHEA:15428
Rhea reaction
1
1
1
KEGG:R06897
RHEA:42075
reaction
UPa:UCR06897
2-hydroxy-hept-2,4-diene-1,7-dioic acid + H(2)O = 2,4-dihydroxyhept-2-enedioic acid
1
LR
1
KEGG:R06897
KEGG reaction
RHEA:42075
Rhea reaction
1
1
1
1
1
1
KEGG:R06974
METACYC:GARTRANSFORMYL2-RXN
RHEA:24832
reaction
UPa:UCR06974
ATP + N(1)-(5-phospho-D-ribosyl)glycinamide + formate = ADP + N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide + phosphate
1
LR
1
KEGG:R06974
KEGG reaction
METACYC:GARTRANSFORMYL2-RXN
MetaCyc
MetaCyc REACTION
RHEA:24832
Rhea reaction
1
1
1
1
1
1
KEGG:R06975
METACYC:RXN-10066
RHEA:24839
reaction
UPa:UCR06975
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + ATP + formate = 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + ADP + phosphate
1
LR
1
KEGG:R06975
KEGG reaction
METACYC:RXN-10066
Rhea
MetaCyc REACTION
RHEA:24839
Rhea reaction
1
1
1
1
KEGG:R06977
METACYC:R101-RXN
RHEA:11163
reaction
UPa:UCR06977
L-aspartate 4-semialdehyde + L-glutamate = 2-oxoglutarate + L-2,4-diaminobutanoate
1
1
LR
1
LR
1
KEGG:R06977
KEGG reaction
METACYC:R101-RXN
Rhea
MetaCyc REACTION
RHEA:11163
Rhea reaction
1
1
1
1
KEGG:R06978
METACYC:R102-RXN
RHEA:16904
reaction
UPa:UCR06978
L-2,4-diaminobutanoate + acetyl-CoA = CoA + N(4)-acetyl-L-2,4-diaminobutyric acid
1
LR
1
KEGG:R06978
KEGG reaction
METACYC:R102-RXN
Rhea
MetaCyc REACTION
RHEA:16904
Rhea reaction
1
1
1
KEGG:R06979
METACYC:R103-RXN
RHEA:17284
reaction
UPa:UCR06979
N(4)-acetyl-L-2,4-diaminobutyric acid = H(2)O + L-ectoine
1
LR
1
KEGG:R06979
KEGG reaction
METACYC:R103-RXN
Rhea
MetaCyc REACTION
RHEA:17284
Rhea reaction
1
1
1
KEGG:R06982
METACYC:RXN-2961
RHEA:22491
reaction
UPa:UCR06982
formaldehyde + glutathione = S-(hydroxymethyl)glutathione
1
LR
1
KEGG:R06982
KEGG reaction
METACYC:RXN-2961
MetaCyc
MetaCyc REACTION
RHEA:22491
Rhea reaction
1
1
1
1