21:07:2015 00:00 unipathway_ontology 1.2 anne.morgat@isb-sib.ch UniPathway Release 2015_03 definition definition If R <- P o Q is a defining property chain axiom, then it also holds that R -> P o Q. Note that this cannot be expressed directly in OWL is a defining property chain axiom If R <- P o Q is a defining property chain axiom, then (1) R -> P o Q holds and (2) Q is either reflexive or locally reflexive. A corollary of this is that P SubPropertyOf R. is a defining property chain axiom where second argument is reflexive FORMULA InChI unipathway_ontology uniprot_super_pathway true true UniProt super-pathway synonym_type_property database_cross_reference has_exact_synonym has_obo_format_version has_obo_namespace has_related_synonym has_synonym_type id shorthand is part of my brain is part of my body (continuant parthood, two material entities) my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity) this day is part of this year (occurrent parthood) a core relation that holds between a part and its whole Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other. Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.) A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'. part_of BFO:0000050 unipathway_ontology part_of part_of part of part of http://www.obofoundry.org/ro/#OBO_REL:part_of has part my body has part my brain (continuant parthood, two material entities) my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity) this year has part this day (occurrent parthood) a core relation that holds between a whole and its part Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part. Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.) A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'. has_part has part preceded by x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. An example is: translation preceded_by transcription; aging preceded_by development (not however death preceded_by aging). Where derives_from links classes of continuants, preceded_by links classes of processes. Clearly, however, these two relations are not independent of each other. Thus if cells of type C1 derive_from cells of type C, then any cell division involving an instance of C1 in a given lineage is preceded_by cellular processes involving an instance of C. The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other. is preceded by preceded_by http://www.obofoundry.org/ro/#OBO_REL:preceded_by BFO:0000062 unipathway_ontology preceded_by preceded_by preceded by preceded by precedes x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. precedes occurs in b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t occurs_in unfolds in unfolds_in Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant occurs in site of [copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant contains process participates in this blood clot participates in this blood coagulation this input material (or this output material) participates in this process this investigator participates in this investigation a relation between a continuant and a process, in which the continuant is somehow involved in the process participates_in participates in has participant this blood coagulation has participant this blood clot this investigation has participant this investigator this process has participant this input material (or this output material) a relation between a process and a continuant, in which the continuant is somehow involved in the process Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time. has_participant http://www.obofoundry.org/ro/#OBO_REL:has_participant has participant A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B. dos 2017-05-24T09:30:46Z has regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B. dos 2017-05-24T09:31:01Z By convention GO molecular functions are classified by their effector function. Internal regulatory functions are treated as components. For example, NMDA glutmate receptor activity is a cation channel activity with positive regulatory component 'glutamate binding' and negative regulatory components including 'zinc binding' and 'magnesium binding'. has negative regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B. dos 2017-05-24T09:31:17Z By convention GO molecular functions are classified by their effector function and internal regulatory functions are treated as components. So, for example calmodulin has a protein binding activity that has positive regulatory component activity calcium binding activity. Receptor tyrosine kinase activity is a tyrosine kinase activity that has positive regulatory component 'ligand binding'. has positive regulatory component activity dos 2017-05-24T09:44:33Z A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B. has component activity w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. dos 2017-05-24T09:49:21Z has component process A relationship that holds between between a receptor and an chemical entity, typically a small molecule or peptide, that carries information between cells or compartments of a cell and which binds the receptor and regulates its effector function. dos 2017-07-19T17:30:36Z has ligand dos 2017-09-17T13:52:24Z Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. directly regulated by Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. GOC:dos Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. dos 2017-09-17T13:52:38Z directly negatively regulated by Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. GOC:dos Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1. dos 2017-09-17T13:52:47Z directly positively regulated by Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1. GOC:dos A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity. dos 2017-09-22T14:14:36Z This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations. has effector activity A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity. GOC:dos David Osumi-Sutherland X ends_after Y iff: end(Y) before_or_simultaneous_with end(X) ends after David Osumi-Sutherland starts_at_end_of X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y) immediately preceded by David Osumi-Sutherland ends_at_start_of meets X immediately_precedes_Y iff: end(X) simultaneous_with start(Y) immediately precedes x overlaps y if and only if there exists some z such that x has part z and z part of y http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.obolibrary.org/obo/BFO_0000050 some ?Y) overlaps true w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. The definition of 'has component' is still under discussion. The challenge is in providing a definition that does not imply transitivity. For use in recording has_part with a cardinality constraint, because OWL does not permit cardinality constraints to be used in combination with transitive object properties. In situations where you would want to say something like 'has part exactly 5 digit, you would instead use has_component exactly 5 digit. has component process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2. We use 'regulates' here to specifically imply control. However, many colloquial usages of the term correctly correspond to the weaker relation of 'causally upstream of or within' (aka influences). Consider relabeling to make things more explicit Chris Mungall David Hill Tanya Berardini GO Regulation precludes parthood; the regulatory process may not be within the regulated process. regulates (processual) false regulates Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2. Chris Mungall negatively regulates (process to process) negatively regulates Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2. Chris Mungall positively regulates (process to process) positively regulates mechanosensory neuron capable of detection of mechanical stimulus involved in sensory perception (GO:0050974) osteoclast SubClassOf 'capable of' some 'bone resorption' A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. Chris Mungall has function realized in For compatibility with BFO, this relation has a shortcut definition in which the expression "capable of some P" expands to "bearer_of (some realized_by only P)". RO_0000053 some (RO_0000054 only ?Y) capable of c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p. Chris Mungall has function in RO_0000053 some (RO_0000054 only (BFO_0000050 some ?Y)) capable of part of true x actively participates in y if and only if x participates in y and x realizes some active role Chris Mungall agent in actively participates in 'heart development' has active participant some Shh protein x has participant y if and only if x realizes some active role that inheres in y This may be obsoleted and replaced by the original 'has agent' relation Chris Mungall has agent has active participant Chris Mungall Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends. https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1 A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations. temporally related to p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p. Chris Mungall consumes RO:0002233 unipathway_ontology has_input_compound has_input_compound has input has input p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p. Chris Mungall produces RO:0002234 unipathway_ontology has_output_compound has_output_compound has output has output A faulty traffic light (material entity) whose malfunctioning (a process) is causally upstream of a traffic collision (a process): the traffic light acts upstream of the collision. c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes. acts upstream of A gene product that has some activity, where that activity may be a part of a pathway or upstream of the pathway. c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process. affects acts upstream of or within cjm holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y causally upstream of, positive effect cjm holds between x and y if and only if x is causally upstream of y and the progression of x decreases the frequency, rate or extent of y causally upstream of, negative effect A mereological relationship or a topological relationship Chris Mungall Do not use this relation directly. It is ended as a grouping for a diverse set of relations, all involving parthood or connectivity relationships mereotopologically related to a particular instances of akt-2 enables some instance of protein kinase activity Chris Mungall catalyzes executes has is catalyzing is executing This relation differs from the parent relation 'capable of' in that the parent is weaker and only expresses a capability that may not be actually realized, whereas this relation is always realized. This relation is currently used experimentally by the Gene Ontology Consortium. It may not be stable and may be obsoleted at some future time. enables A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities. Chris Mungall This is a grouping relation that collects relations used for the purpose of connecting structure and function functionally related to this relation holds between c and p when c is part of some c', and c' is capable of p. Chris Mungall false part of structure that is capable of true c involved_in p if and only if c enables some process p', and p' is part of p Chris Mungall actively involved in enables part of involved in inverse of enables Chris Mungall enabled by inverse of regulates Chris Mungall regulated by (processual) regulated by inverse of negatively regulates Chris Mungall negatively regulated by inverse of positively regulates Chris Mungall positively regulated by inverse of has input Chris Mungall input of inverse of has output Chris Mungall output of inverse of upstream of Chris Mungall causally downstream of Chris Mungall immediately causally downstream of This relation groups causal relations between material entities and causal relations between processes This branch of the ontology deals with causal relations between entities. It is divided into two branches: causal relations between occurrents/processes, and causal relations between material entities. We take an 'activity flow-centric approach', with the former as primary, and define causal relations between material entities in terms of causal relations between occurrents. To define causal relations in an activity-flow type network, we make use of 3 primitives: * Temporal: how do the intervals of the two occurrents relate? * Is the causal relation regulatory? * Is the influence positive or negative The first of these can be formalized in terms of the Allen Interval Algebra. Informally, the 3 bins we care about are 'direct', 'indirect' or overlapping. Note that all causal relations should be classified under a RO temporal relation (see the branch under 'temporally related to'). Note that all causal relations are temporal, but not all temporal relations are causal. Two occurrents can be related in time without being causally connected. We take causal influence to be primitive, elucidated as being such that has the upstream changed, some qualities of the donwstream would necessarily be modified. For the second, we consider a relationship to be regulatory if the system in which the activities occur is capable of altering the relationship to achieve some objective. This could include changing the rate of production of a molecule. For the third, we consider the effect of the upstream process on the output(s) of the downstream process. If the level of output is increased, or the rate of production of the output is increased, then the direction is increased. Direction can be positive, negative or neutral or capable of either direction. Two positives in succession yield a positive, two negatives in succession yield a positive, otherwise the default assumption is that the net effect is canceled and the influence is neutral. Each of these 3 primitives can be composed to yield a cross-product of different relation types. Chris Mungall Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect. causally related to p is causally upstream of q if and only if p precedes q and p and q are linked in a causal chain Chris Mungall causally upstream of p is immediately causally upstream of q iff both (a) p immediately precedes q and (b) p is causally upstream of q. In addition, the output of p must be an input of q. Chris Mungall immediately causally upstream of p 'causally upstream or within' q iff (1) the end of p is before the end of q and (2) the execution of p exerts some causal influence over the outputs of q; i.e. if p was abolished or the outputs of p were to be modified, this would necessarily affect q. We would like to make this disjoint with 'preceded by', but this is prohibited in OWL2 Chris Mungall influences (processual) affects causally upstream of or within inverse of causally upstream of or within Chris Mungall causally downstream of or within c involved in regulation of p if c is involved in some p' and p' regulates some p Chris Mungall involved in regulation of c involved in regulation of p if c is involved in some p' and p' positively regulates some p Chris Mungall involved in positive regulation of c involved in regulation of p if c is involved in some p' and p' negatively regulates some p Chris Mungall involved in negative regulation of c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p OWL does not allow defining object properties via a Union Chris Mungall involved in or reguates involved in or involved in regulation of A protein that enables activity in a cytosol. c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure. Chris Mungall executes activity in enables activity in is active in true c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure. GOC:cjm GOC:dos A relationship that holds between two entities in which the processes executed by the two entities are causally connected. This relation and all sub-relations can be applied to either (1) pairs of entities that are interacting at any moment of time (2) populations or species of entity whose members have the disposition to interact (3) classes whose members have the disposition to interact. Considering relabeling as 'pairwise interacts with' Chris Mungall Note that this relationship type, and sub-relationship types may be redundant with process terms from other ontologies. For example, the symbiotic relationship hierarchy parallels GO. The relations are provided as a convenient shortcut. Consider using the more expressive processual form to capture your data. In the future, these relations will be linked to their cognate processes through rules. in pairwise interaction with interacts with http://purl.obolibrary.org/obo/MI_0914 https://github.com/oborel/obo-relations/wiki/InteractionRelations An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other. Chris Mungall binds molecularly binds with molecularly interacts with http://purl.obolibrary.org/obo/MI_0915 Axiomatization to GO to be added later Chris Mungall An interaction relation between x and y in which x catalyzes a reaction in which a phosphate group is added to y. phosphorylates Holds between molecular entities A and B where A can physically interact with B and in doing so regulates a process that B is capable of. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B. Chris Mungall molecularly controls activity directly regulates activity of Holds between molecular entities A and B where A can physically interact with B and in doing so negatively regulates a process that B is capable of. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B. Chris Mungall inhibits molecularly decreases activity of activity directly negatively regulates activity of Holds between molecular entities A and B where A can physically interact with B and in doing so positively regulates a process that B is capable of. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B. Chris Mungall activates molecularly increases activity of activity directly positively regulates activity of Chris Mungall This property or its subproperties is not to be used directly. These properties exist as helper properties that are used to support OWL reasoning. helper property (not for use in curation) p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c. Chris Mungall has part that occurs in true Chris Mungall is kinase activity A relationship between a material entity and a process where the material entity has some causal role that influences the process causal agent in process p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one of direct activation or direct inhibition. p may be upstream, downstream, part of or a container of q. Chris Mungall Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect. causal relation between processes The intent is that the process branch of the causal property hierarchy is primary (causal relations hold between occurrents/processes), and that the material branch is defined in terms of the process branch Chris Mungall Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect. causal relation between material entities Chris Mungall causally influenced by (material entity to material entity) causally influenced by Chris Mungall interaction relation helper property https://github.com/oborel/obo-relations/wiki/InteractionRelations Chris Mungall molecular interaction relation helper property Holds between materal entities a and b if the activity of a is causally upstream of the activity of b, or causally upstream of a an activity that modifies b Chris Mungall causally influences (material entity to material entity) causally influences Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. Chris Mungall directly regulates (processual) directly regulates gland SubClassOf 'has part structure that is capable of' some 'secretion by cell' s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p Chris Mungall has part structure that is capable of A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity. Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect. Chris Mungall causal relation between material entity and a process pyrethroid -> growth Holds between c and p if and only if c is capable of some activity a, and a regulates p. capable of regulating Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p. capable of negatively regulating renin -> arteriolar smooth muscle contraction Holds between c and p if and only if c is capable of some activity a, and a positively regulates p. capable of positively regulating Inverse of 'causal agent in process' process has causal agent Process(P1) directly postively regulates process(P2) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P1 directly positively regulates P2. directly positively regulates (process to process) directly positively regulates Process(P1) directly negatively regulates process(P2) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P1 directly negatively regulates P2. directly negatively regulates (process to process) directly negatively regulates a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix. Melissa Haendel Note that this definition doesn't quite distinguish the output of a transformation process from a production process, which is related to the identity/granularity issue. produces a produced_by b iff some process that occurs_in b has_output a. Melissa Haendel produced by Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P. cjm 2018-01-25T23:20:13Z enables subfunction cjm 2018-01-26T23:49:30Z acts upstream of or within, positive effect cjm 2018-01-26T23:49:51Z acts upstream of or within, negative effect c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive cjm 2018-01-26T23:53:14Z acts upstream of, positive effect c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative cjm 2018-01-26T23:53:22Z acts upstream of, negative effect cjm 2018-03-13T23:55:05Z causally upstream of or within, negative effect cjm 2018-03-13T23:55:19Z causally upstream of or within, positive effect unipathway_ontology has_connecting_compound has connecting compound An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts. continuant An entity that has temporal parts and that happens, unfolds or develops through time. occurrent A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything. independent continuant An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. process An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time. material entity molecular process molecular_function catalytic activity biological_process true kinase activity transferase activity transferase activity, transferring phosphorus-containing groups A chemical reaction involved in a UniPathway pathway. GO:0003824 reaction UPa:UCR00000 reaction 1 1 1 1 KEGG:R00005 METACYC:ALLOPHANATE-HYDROLASE-RXN RHEA:19032 reaction UPa:UCR00005 H(2)O + urea-1-carboxylate = 2 CO(2) + 2 NH(3) 1 LR 1 KEGG:R00005 KEGG reaction METACYC:ALLOPHANATE-HYDROLASE-RXN MetaCyc MetaCyc REACTION RHEA:19032 Rhea reaction 1 1 1 KEGG:R00010 METACYC:TREHALA-RXN RHEA:20871 RHEA:32678 reaction UPa:UCR00010 H(2)O + alpha,alpha-trehalose = 2 D-glucose 1 LR 1 KEGG:R00010 KEGG reaction METACYC:TREHALA-RXN MetaCyc MetaCyc REACTION RHEA:20871 Rhea reaction RHEA:32678 Rhea reaction 1 1 1 KEGG:R00013 METACYC:GLYOCARBOLIG-RXN RHEA:10139 reaction UPa:UCR00013 2 glyoxylate = 2-hydroxy-3-oxopropanoate + CO(2) 1 LR 1 KEGG:R00013 KEGG reaction METACYC:GLYOCARBOLIG-RXN MetaCyc MetaCyc REACTION RHEA:10139 Rhea reaction 1 1 1 1 KEGG:R00014 METACYC:RXN-12583 reaction UPa:UCR00014 pyruvate + thiamine diphosphate = 2-hydroxyethyl-ThPP + CO(2) 1 LR 1 KEGG:R00014 KEGG reaction METACYC:RXN-12583 MetaCyc MetaCyc REACTION 1 1 1 1 1 1 KEGG:R00021 METACYC:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN RHEA:12131 reaction UPa:UCR00021 2 L-glutamate + 2 oxidized ferredoxin = 2-oxoglutarate + 2 H(+) + L-glutamine + 2 reduced ferredoxin 1 RL 1 KEGG:R00021 KEGG reaction METACYC:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN MetaCyc MetaCyc REACTION RHEA:12131 Rhea reaction 1 1 1 KEGG:R00036 METACYC:PORPHOBILSYNTH-RXN RHEA:24067 reaction UPa:UCR00036 2 5-aminolevulinate = 2 H(2)O + porphobilinogen 1 LR 1 KEGG:R00036 KEGG reaction METACYC:PORPHOBILSYNTH-RXN Rhea MetaCyc REACTION RHEA:24067 Rhea reaction 1 1 1 KEGG:R00066 METACYC:RIBOFLAVIN-SYN-RXN RHEA:20775 reaction UPa:UCR00066 2 6,7-dimethyl-8-(1-D-ribityl)lumazine = 5-amino-6-(D-ribitylamino)uracil + riboflavin 1 LR 1 KEGG:R00066 KEGG reaction METACYC:RIBOFLAVIN-SYN-RXN MetaCyc MetaCyc REACTION RHEA:20775 Rhea reaction 1 1 1 1 KEGG:R00084 METACYC:OHMETHYLBILANESYN-RXN RHEA:13188 reaction UPa:UCR00084 H(2)O + 4 porphobilinogen = 4 NH(3) + hydroxymethylbilane 1 LR 1 KEGG:R00084 KEGG reaction METACYC:OHMETHYLBILANESYN-RXN Rhea MetaCyc REACTION RHEA:13188 Rhea reaction 1 1 1 1 1 1 KEGG:R00093 METACYC:GLUTAMATE-SYNTHASE-NADH-RXN RHEA:13756 reaction UPa:UCR00093 2 L-glutamate + NAD(+) = 2-oxoglutarate + H(+) + L-glutamine + NADH 1 RL 1 KEGG:R00093 KEGG reaction METACYC:GLUTAMATE-SYNTHASE-NADH-RXN MetaCyc MetaCyc REACTION RHEA:13756 Rhea reaction 1 1 1 1 1 1 KEGG:R00114 METACYC:GLUTAMATESYN-RXN RHEA:15504 reaction UPa:UCR00114 2 L-glutamate + NADP(+) = 2-oxoglutarate + H(+) + L-glutamine + NADPH 1 RL 1 KEGG:R00114 KEGG reaction METACYC:GLUTAMATESYN-RXN MetaCyc MetaCyc REACTION RHEA:15504 Rhea reaction 1 1 1 KEGG:R00127 METACYC:ADENYL-KIN-RXN RHEA:12976 reaction UPa:UCR00127 AMP + ATP = 2 ADP 1 RL 1 KEGG:R00127 KEGG reaction METACYC:ADENYL-KIN-RXN Rhea MetaCyc REACTION RHEA:12976 Rhea reaction 1 1 1 1 KEGG:R00130 METACYC:DEPHOSPHOCOAKIN-RXN RHEA:18248 reaction UPa:UCR00130 3'-dephospho-CoA + ATP = ADP + CoA 1 LR 1 KEGG:R00130 KEGG reaction METACYC:DEPHOSPHOCOAKIN-RXN MetaCyc MetaCyc REACTION RHEA:18248 Rhea reaction 1 1 1 1 KEGG:R00131 METACYC:UREASE-RXN RHEA:20560 reaction UPa:UCR00131 H(2)O + urea = CO(2) + 2 NH(3) 1 LR 1 KEGG:R00131 KEGG reaction METACYC:UREASE-RXN MetaCyc MetaCyc REACTION RHEA:20560 Rhea reaction 1 1 1 1 KEGG:R00137 METACYC:2.7.7.1-RXN RHEA:21363 reaction UPa:UCR00137 ATP + nicotinamide D-ribonucleotide = NAD(+) + diphosphate 1 LR 1 KEGG:R00137 KEGG reaction METACYC:2.7.7.1-RXN MetaCyc MetaCyc REACTION RHEA:21363 Rhea reaction 1 1 1 1 1 KEGG:R00150 METACYC:CARBAMATE-KINASE-RXN RHEA:10155 reaction UPa:UCR00150 ATP + CO(2) + NH(3) = ADP + carbamoyl phosphate 1 RL 1 KEGG:R00150 KEGG reaction METACYC:CARBAMATE-KINASE-RXN Rhea MetaCyc REACTION RHEA:10155 Rhea reaction 1 1 1 1 KEGG:R00156 METACYC:UDPKIN-RXN RHEA:25101 reaction UPa:UCR00156 ATP + UDP = ADP + UTP 1 LR 1 KEGG:R00156 KEGG reaction METACYC:UDPKIN-RXN MetaCyc MetaCyc REACTION RHEA:25101 Rhea reaction 1 1 1 1 KEGG:R00158 METACYC:RXN-12002 RHEA:24403 reaction UPa:UCR00158 ATP + UMP = ADP + UDP 1 1 LR 1 LR 1 KEGG:R00158 KEGG reaction METACYC:RXN-12002 MetaCyc MetaCyc REACTION RHEA:24403 Rhea reaction 1 1 1 1 KEGG:R00161 METACYC:FADSYN-RXN RHEA:17240 reaction UPa:UCR00161 ATP + FMN = FAD + diphosphate 1 LR 1 KEGG:R00161 KEGG reaction METACYC:FADSYN-RXN MetaCyc MetaCyc REACTION RHEA:17240 Rhea reaction 1 1 1 1 KEGG:R00173 METACYC:3.1.3.74-RXN RHEA:20536 reaction UPa:UCR00173 H(2)O + pyridoxal 5'-phosphate = phosphate + pyridoxal 1 LR 1 KEGG:R00173 KEGG reaction METACYC:3.1.3.74-RXN MetaCyc MetaCyc REACTION RHEA:20536 Rhea reaction 1 1 1 1 KEGG:R00174 METACYC:PYRIDOXKIN-RXN RHEA:10227 reaction UPa:UCR00174 ATP + pyridoxal = ADP + pyridoxal 5'-phosphate 1 LR 1 KEGG:R00174 KEGG reaction METACYC:PYRIDOXKIN-RXN MetaCyc MetaCyc REACTION RHEA:10227 Rhea reaction 1 1 1 1 1 1 KEGG:R00177 METACYC:S-ADENMETSYN-RXN RHEA:21083 reaction UPa:UCR00177 S-adenosyl-L-methionine + diphosphate + phosphate = ATP + H(2)O + L-methionine 1 RL 1 KEGG:R00177 KEGG reaction METACYC:S-ADENMETSYN-RXN MetaCyc MetaCyc REACTION RHEA:21083 Rhea reaction 1 1 1 1 KEGG:R00178 METACYC:SAMDECARB-RXN RHEA:15984 reaction UPa:UCR00178 H(+) + S-adenosyl-L-methionine = CO(2) + S-adenosylmethioninamine 1 LR 1 KEGG:R00178 KEGG reaction METACYC:SAMDECARB-RXN MetaCyc MetaCyc REACTION RHEA:15984 Rhea reaction 1 1 1 KEGG:R00179 METACYC:4.4.1.14-RXN RHEA:21747 reaction UPa:UCR00179 S-adenosyl-L-methionine = 1-aminocyclopropanecarboxylate + S-methyl-5'-thioadenosine 1 LR 1 KEGG:R00179 KEGG reaction METACYC:4.4.1.14-RXN MetaCyc MetaCyc REACTION RHEA:21747 Rhea reaction 1 1 1 1 KEGG:R00181 METACYC:AMP-DEAMINASE-RXN RHEA:14780 reaction UPa:UCR00181 AMP + H(2)O = IMP + NH(3) 1 LR 1 KEGG:R00181 KEGG reaction METACYC:AMP-DEAMINASE-RXN MetaCyc MetaCyc REACTION RHEA:14780 Rhea reaction 1 1 1 1 KEGG:R00185 METACYC:ADENOSINE-KINASE-RXN RHEA:20827 reaction UPa:UCR00185 ATP + adenosine = ADP + AMP 1 LR 1 KEGG:R00185 KEGG reaction METACYC:ADENOSINE-KINASE-RXN MetaCyc MetaCyc REACTION RHEA:20827 Rhea reaction 1 1 1 1 1 1 KEGG:R00189 METACYC:NAD-SYNTH-NH3-RXN RHEA:21191 reaction UPa:UCR00189 ATP + NH(3) + deamido-NAD(+) = AMP + NAD(+) + diphosphate 1 LR 1 KEGG:R00189 KEGG reaction METACYC:NAD-SYNTH-NH3-RXN MetaCyc MetaCyc REACTION RHEA:21191 Rhea reaction 1 1 1 1 KEGG:R00190 METACYC:ADENPRIBOSYLTRAN-RXN RHEA:16612 reaction UPa:UCR00190 AMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + adenine 1 RL 1 KEGG:R00190 KEGG reaction METACYC:ADENPRIBOSYLTRAN-RXN Rhea MetaCyc REACTION RHEA:16612 Rhea reaction 1 1 1 KEGG:R00191 METACYC:RXN0-5038 RHEA:25280 reaction UPa:UCR00191 3',5'-cyclic AMP + H(2)O = AMP 1 LR 1 KEGG:R00191 KEGG reaction METACYC:RXN0-5038 MetaCyc MetaCyc REACTION RHEA:25280 Rhea reaction 1 1 1 1 KEGG:R00192 METACYC:ADENOSYLHOMOCYSTEINASE-RXN RHEA:21711 reaction UPa:UCR00192 H(2)O + S-adenosyl-L-homocysteine = L-homocysteine + adenosine 1 LR 1 KEGG:R00192 KEGG reaction METACYC:ADENOSYLHOMOCYSTEINASE-RXN Rhea MetaCyc REACTION RHEA:21711 Rhea reaction 1 1 1 1 KEGG:R00200 METACYC:PEPDEPHOS-RXN RHEA:18160 reaction UPa:UCR00200 ATP + pyruvate = ADP + phosphoenolpyruvate 1 RL 1 KEGG:R00200 KEGG reaction METACYC:PEPDEPHOS-RXN Rhea MetaCyc REACTION RHEA:18160 Rhea reaction 1 1 1 1 KEGG:R00212 METACYC:PYRUVFORMLY-RXN RHEA:11847 reaction UPa:UCR00212 acetyl-CoA + formate = CoA + pyruvate 1 RL 1 KEGG:R00212 KEGG reaction METACYC:PYRUVFORMLY-RXN Rhea MetaCyc REACTION RHEA:11847 Rhea reaction 1 1 1 KEGG:R00226 METACYC:ACETOLACTSYN-RXN RHEA:25252 reaction UPa:UCR00226 (S)-2-acetolactate + CO(2) = 2 pyruvate 1 RL 1 KEGG:R00226 KEGG reaction METACYC:ACETOLACTSYN-RXN Rhea MetaCyc REACTION RHEA:25252 Rhea reaction 1 1 1 1 1 1 KEGG:R00228 METACYC:ACETALD-DEHYDROG-RXN RHEA:23291 reaction UPa:UCR00228 CoA + NAD(+) + acetaldehyde = H(+) + NADH + acetyl-CoA 1 LR 1 KEGG:R00228 KEGG reaction METACYC:ACETALD-DEHYDROG-RXN Rhea MetaCyc REACTION RHEA:23291 Rhea reaction 1 1 1 1 KEGG:R00230 METACYC:PHOSACETYLTRANS-RXN RHEA:19524 reaction UPa:UCR00230 acetyl-CoA + phosphate = CoA + acetyl phosphate 1 RL 1 KEGG:R00230 KEGG reaction METACYC:PHOSACETYLTRANS-RXN Rhea MetaCyc REACTION RHEA:19524 Rhea reaction 1 1 1 KEGG:R00233 METACYC:MALONYL-COA-DECARBOXYLASE-RXN RHEA:18784 reaction UPa:UCR00233 malonyl-CoA = CO(2) + acetyl-CoA 1 LR 1 KEGG:R00233 KEGG reaction METACYC:MALONYL-COA-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:18784 Rhea reaction 1 1 1 KEGG:R00238 METACYC:ACETYL-COA-ACETYLTRANSFER-RXN RHEA:21039 reaction UPa:UCR00238 2 acetyl-CoA = CoA + acetoacetyl-CoA 1 LR 1 KEGG:R00238 KEGG reaction METACYC:ACETYL-COA-ACETYLTRANSFER-RXN Rhea MetaCyc REACTION RHEA:21039 Rhea reaction 1 1 1 1 KEGG:R00239 METACYC:GLUTKIN-RXN RHEA:14880 reaction UPa:UCR00239 ATP + L-glutamate = ADP + L-glutamyl 5-phosphate 1 LR 1 KEGG:R00239 KEGG reaction METACYC:GLUTKIN-RXN MetaCyc MetaCyc REACTION RHEA:14880 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00243 METACYC:GLUTAMATE-DEHYDROGENASE-RXN RHEA:15136 reaction UPa:UCR00243 H(2)O + L-glutamate + NAD(+) = 2-oxoglutarate + H(+) + NADH + NH(3) 1 LR 1 KEGG:R00243 KEGG reaction METACYC:GLUTAMATE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:15136 Rhea reaction 1 1 1 1 1 1 KEGG:R00253 METACYC:GLUTAMINESYN-RXN RHEA:16172 reaction UPa:UCR00253 ATP + L-glutamate + NH(3) = ADP + L-glutamine + phosphate 1 LR 1 KEGG:R00253 KEGG reaction METACYC:GLUTAMINESYN-RXN Rhea MetaCyc REACTION RHEA:16172 Rhea reaction 1 1 1 1 KEGG:R00256 METACYC:GLUTAMIN-RXN RHEA:15892 reaction UPa:UCR00256 H(2)O + L-glutamine = L-glutamate + NH(3) 1 1 LR 2 LR 2 KEGG:R00256 KEGG reaction METACYC:GLUTAMIN-RXN MetaCyc MetaCyc REACTION RHEA:15892 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R00257 METACYC:NAD-SYNTH-GLN-RXN RHEA:24387 reaction UPa:UCR00257 ATP + H(2)O + L-glutamine + deamido-NAD(+) = AMP + L-glutamate + NAD(+) + diphosphate 1 LR 1 KEGG:R00257 KEGG reaction METACYC:NAD-SYNTH-GLN-RXN MetaCyc MetaCyc REACTION RHEA:24387 Rhea reaction 1 1 1 1 KEGG:R00258 METACYC:ALANINE-AMINOTRANSFERASE-RXN RHEA:19456 reaction UPa:UCR00258 2-oxoglutarate + L-alanine = L-glutamate + pyruvate 1 LR 1 KEGG:R00258 KEGG reaction METACYC:ALANINE-AMINOTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:19456 Rhea reaction 1 1 1 1 KEGG:R00259 METACYC:N-ACETYLTRANSFER-RXN RHEA:24295 reaction UPa:UCR00259 L-glutamate + acetyl-CoA = CoA + N-acetyl-L-glutamate 1 LR 1 KEGG:R00259 KEGG reaction METACYC:N-ACETYLTRANSFER-RXN Rhea MetaCyc REACTION RHEA:24295 Rhea reaction 1 1 KEGG:R00262 METACYC:METHYLASPARTATE-MUTASE-RXN RHEA:12860 reaction UPa:UCR00262 (2S,3S)-3-methyl-L-aspartate = L-glutamate 1 RL 1 KEGG:R00262 KEGG reaction METACYC:METHYLASPARTATE-MUTASE-RXN MetaCyc MetaCyc REACTION RHEA:12860 Rhea reaction 1 1 1 1 1 1 KEGG:R00264 METACYC:25-DIOXOVALERATE-DEHYDROGENASE-RXN RHEA:11299 reaction UPa:UCR00264 2,5-dioxopentanoate + H(2)O + NADP(+) = 2-oxoglutarate + H(+) + NADPH 1 LR 1 KEGG:R00264 KEGG reaction METACYC:25-DIOXOVALERATE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:11299 Rhea reaction 1 1 1 1 1 1 KEGG:R00267 METACYC:ISOCITDEH-RXN METACYC:RXN-8642 RHEA:19632 reaction UPa:UCR00267 NADP(+) + isocitrate = 2-oxoglutarate + CO(2) + H(+) + NADPH 1 LR 1 KEGG:R00267 KEGG reaction METACYC:ISOCITDEH-RXN MetaCyc MetaCyc REACTION METACYC:RXN-8642 MetaCyc Rhea MetaCyc REACTION RHEA:19632 Rhea reaction 1 1 1 1 1 KEGG:R00271 METACYC:HOMOCITRATE-SYNTHASE-RXN RHEA:12932 reaction UPa:UCR00271 2-oxoglutarate + H(2)O + acetyl-CoA = (R)-homocitrate + CoA 1 LR 1 KEGG:R00271 KEGG reaction METACYC:HOMOCITRATE-SYNTHASE-RXN Rhea MetaCyc REACTION RHEA:12932 Rhea reaction 1 1 1 KEGG:R00272 METACYC:RXN-7774 RHEA:10527 reaction UPa:UCR00272 2-oxoglutarate = CO(2) + succinate semialdehyde 1 LR 1 KEGG:R00272 KEGG reaction METACYC:RXN-7774 MetaCyc MetaCyc REACTION RHEA:10527 Rhea reaction 1 1 1 1 1 1 KEGG:R00277 METACYC:PMPOXI-RXN RHEA:15820 reaction UPa:UCR00277 H(2)O + O(2) + pyridoxamine 5'-phosphate = H(2)O(2) + NH(3) + pyridoxal 5'-phosphate 1 LR 1 KEGG:R00277 KEGG reaction METACYC:PMPOXI-RXN MetaCyc MetaCyc REACTION RHEA:15820 Rhea reaction 1 1 1 1 KEGG:R00278 METACYC:PNPOXI-RXN RHEA:15152 reaction UPa:UCR00278 O(2) + pyridoxine 5'-phosphate = H(2)O(2) + pyridoxal 5'-phosphate 1 LR 1 KEGG:R00278 KEGG reaction METACYC:PNPOXI-RXN MetaCyc MetaCyc REACTION RHEA:15152 Rhea reaction 1 1 1 1 1 1 KEGG:R00286 METACYC:UGD-RXN RHEA:23599 reaction UPa:UCR00286 H(2)O + 2 NAD(+) + UDP-alpha-D-glucose = 2 H(+) + 2 NADH + UDP-alpha-D-glucuronate 1 LR 1 KEGG:R00286 KEGG reaction METACYC:UGD-RXN MetaCyc MetaCyc REACTION RHEA:23599 Rhea reaction 1 1 1 1 1 1 KEGG:R00294 METACYC:NITRIC-OXIDE-REDUCTASE-RXN RHEA:10991 RHEA:30214 reaction UPa:UCR00294 2 H(+) + 2 ferrocytochrome c + 2 nitric oxide = H(2)O + 2 ferricytochrome c + nitrous oxide 1 LR 1 KEGG:R00294 KEGG reaction METACYC:NITRIC-OXIDE-REDUCTASE-RXN Rhea MetaCyc REACTION RHEA:10991 Rhea reaction RHEA:30214 Rhea reaction 1 1 1 1 KEGG:R00299 METACYC:GLUCOKIN-RXN RHEA:17828 reaction UPa:UCR00299 ATP + D-glucose = ADP + D-glucose 6-phosphate 1 LR 1 KEGG:R00299 KEGG reaction METACYC:GLUCOKIN-RXN Rhea MetaCyc REACTION RHEA:17828 Rhea reaction 1 1 1 1 KEGG:R00310 METACYC:PROTOHEMEFERROCHELAT-RXN RHEA:22587 reaction UPa:UCR00310 Fe2+ + protoporphyrin-IX = 2 H(+) + protoheme 1 LR 1 KEGG:R00310 KEGG reaction METACYC:PROTOHEMEFERROCHELAT-RXN MetaCyc MetaCyc REACTION RHEA:22587 Rhea reaction 1 1 1 1 KEGG:R00315 METACYC:ACETATEKIN-RXN RHEA:11355 reaction UPa:UCR00315 ATP + acetate = ADP + acetyl phosphate 1 LR 1 KEGG:R00315 KEGG reaction METACYC:ACETATEKIN-RXN Rhea MetaCyc REACTION RHEA:11355 Rhea reaction 1 1 1 KEGG:R00325 METACYC:CITRAMALATE-LYASE-RXN RHEA:15548 reaction UPa:UCR00325 L-citramalate = acetate + pyruvate 1 LR 1 KEGG:R00325 KEGG reaction METACYC:CITRAMALATE-LYASE-RXN Rhea MetaCyc REACTION RHEA:15548 Rhea reaction 1 1 1 1 KEGG:R00336 METACYC:PPGPPSYN-RXN RHEA:14256 reaction UPa:UCR00336 H(2)O + ppGpp = GDP + diphosphate 1 RL 1 KEGG:R00336 KEGG reaction METACYC:PPGPPSYN-RXN MetaCyc MetaCyc REACTION RHEA:14256 Rhea reaction 1 1 1 1 1 KEGG:R00342 METACYC:MALATE-DEH-RXN RHEA:21435 reaction UPa:UCR00342 (S)-malate + NAD(+) = H(+) + NADH + oxaloacetate 1 LR 1 KEGG:R00342 KEGG reaction METACYC:MALATE-DEH-RXN Rhea MetaCyc REACTION RHEA:21435 Rhea reaction 1 1 1 1 1 KEGG:R00351 METACYC:CITSYN-RXN RHEA:16848 reaction UPa:UCR00351 CoA + citrate = H(2)O + acetyl-CoA + oxaloacetate 1 RL 1 KEGG:R00351 KEGG reaction METACYC:CITSYN-RXN MetaCyc MetaCyc REACTION RHEA:16848 Rhea reaction 1 1 1 1 KEGG:R00355 METACYC:ASPAMINOTRANS-RXN RHEA:21827 reaction UPa:UCR00355 2-oxoglutarate + L-aspartate = L-glutamate + oxaloacetate 1 RL 1 KEGG:R00355 KEGG reaction METACYC:ASPAMINOTRANS-RXN Rhea MetaCyc REACTION RHEA:21827 Rhea reaction 1 1 1 1 KEGG:R00361 METACYC:MALATE-DEHYDROGENASE-ACCEPTOR-RXN RHEA:22559 reaction UPa:UCR00361 (S)-malate + Quinone = Hydroquinone + oxaloacetate 1 KEGG:R00361 KEGG reaction METACYC:MALATE-DEHYDROGENASE-ACCEPTOR-RXN MetaCyc MetaCyc REACTION RHEA:22559 Rhea reaction LR 1 1 1 1 1 KEGG:R00367 METACYC:GLYCINE-N-METHYLTRANSFERASE-RXN RHEA:19940 reaction UPa:UCR00367 S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine 1 LR 1 KEGG:R00367 KEGG reaction METACYC:GLYCINE-N-METHYLTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:19940 Rhea reaction 1 1 1 1 KEGG:R00369 METACYC:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN RHEA:24251 reaction UPa:UCR00369 L-alanine + glyoxylate = glycine + pyruvate 1 LR 1 KEGG:R00369 KEGG reaction METACYC:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:24251 Rhea reaction 1 1 1 1 KEGG:R00371 METACYC:AKBLIG-RXN RHEA:20739 reaction UPa:UCR00371 acetyl-CoA + glycine = CoA + L-2-amino-3-oxobutanoic acid 1 RL 1 KEGG:R00371 KEGG reaction METACYC:AKBLIG-RXN MetaCyc Rhea MetaCyc REACTION RHEA:20739 Rhea reaction 1 1 1 1 KEGG:R00372 METACYC:GLYCINE-AMINOTRANSFERASE-RXN RHEA:14092 reaction UPa:UCR00372 2-oxoglutarate + glycine = L-glutamate + glyoxylate 1 RL 1 KEGG:R00372 KEGG reaction METACYC:GLYCINE-AMINOTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:14092 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00396 METACYC:ALANINE-DEHYDROGENASE-RXN RHEA:18408 reaction UPa:UCR00396 H(2)O + L-alanine + NAD(+) = H(+) + NADH + NH(3) + pyruvate 1 LR 1 KEGG:R00396 KEGG reaction METACYC:ALANINE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:18408 Rhea reaction 1 1 KEGG:R00401 METACYC:ALARACECAT-RXN RHEA:20252 reaction UPa:UCR00401 L-alanine = D-alanine 1 LR 1 KEGG:R00401 KEGG reaction METACYC:ALARACECAT-RXN Rhea MetaCyc REACTION RHEA:20252 Rhea reaction 1 1 1 1 1 1 KEGG:R00405 METACYC:SUCCCOASYN-RXN RHEA:17664 reaction UPa:UCR00405 ATP + CoA + succinate = ADP + phosphate + succinyl-CoA 1 RL 1 KEGG:R00405 KEGG reaction METACYC:SUCCCOASYN-RXN Rhea MetaCyc REACTION RHEA:17664 Rhea reaction 1 1 1 1 KEGG:R00410 METACYC:RXNI-2 RHEA:25483 reaction UPa:UCR00410 acetoacetate + succinyl-CoA = acetoacetyl-CoA + succinate 1 1 LR 1 LR 1 KEGG:R00410 KEGG reaction METACYC:RXNI-2 Rhea MetaCyc REACTION RHEA:25483 Rhea reaction 1 1 1 1 KEGG:R00411 METACYC:SUCCGLUDESUCC-RXN RHEA:15172 reaction UPa:UCR00411 H(2)O + N(2)-succinyl-L-glutamic acid = L-glutamate + succinate 1 LR 1 KEGG:R00411 KEGG reaction METACYC:SUCCGLUDESUCC-RXN Rhea MetaCyc REACTION RHEA:15172 Rhea reaction 1 1 1 1 KEGG:R00412 RHEA:16360 reaction UPa:UCR00412 acceptor + succinate = fumarate + reduced acceptor 1 LR 1 KEGG:R00412 KEGG reaction RHEA:16360 Rhea reaction 1 1 1 1 KEGG:R00416 METACYC:NAG1P-URIDYLTRANS-RXN RHEA:13512 reaction UPa:UCR00416 N-acetyl-alpha-D-glucosamine 1-phosphate + UTP = UDP-N-acetyl-alpha-D-glucosamine + diphosphate 1 LR 1 KEGG:R00416 KEGG reaction METACYC:NAG1P-URIDYLTRANS-RXN MetaCyc MetaCyc REACTION RHEA:13512 Rhea reaction 1 1 1 1 1 KEGG:R00425 METACYC:GTP-CYCLOHYDRO-II-RXN RHEA:23707 reaction UPa:UCR00425 GTP + 3 H(2)O = 2,5-diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine + diphosphate + formate 1 LR 1 KEGG:R00425 KEGG reaction METACYC:GTP-CYCLOHYDRO-II-RXN MetaCyc MetaCyc REACTION RHEA:23707 Rhea reaction 1 1 1 KEGG:R00428 reaction UPa:UCR00428 GTP + H(2)O = formamidopyrimidine nucleoside triphosphate 1 LR 1 KEGG:R00428 KEGG reaction 1 1 1 1 KEGG:R00429 METACYC:GTPPYPHOSKIN-RXN RHEA:22091 reaction UPa:UCR00429 ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate 1 LR 1 KEGG:R00429 KEGG reaction METACYC:GTPPYPHOSKIN-RXN MetaCyc MetaCyc REACTION RHEA:22091 Rhea reaction 1 1 1 KEGG:R00451 METACYC:DIAMINOPIMDECARB-RXN RHEA:15104 reaction UPa:UCR00451 DL-2,6-diaminopimelate = CO(2) + L-lysine 1 LR 1 KEGG:R00451 KEGG reaction METACYC:DIAMINOPIMDECARB-RXN MetaCyc MetaCyc REACTION RHEA:15104 Rhea reaction 1 1 1 1 1 KEGG:R00469 METACYC:UREIDOGLYCOLATE-HYDROLASE-RXN RHEA:19812 reaction UPa:UCR00469 (S)-ureidoglycolate + H(2)O = CO(2) + 2 NH(3) + glyoxylate 1 LR 1 KEGG:R00469 KEGG reaction METACYC:UREIDOGLYCOLATE-HYDROLASE-RXN MetaCyc MetaCyc REACTION RHEA:19812 Rhea reaction 1 1 1 1 1 KEGG:R00472 METACYC:MALSYN-RXN RHEA:18184 reaction UPa:UCR00472 (S)-malate + CoA = H(2)O + acetyl-CoA + glyoxylate 1 RL 1 KEGG:R00472 KEGG reaction METACYC:MALSYN-RXN MetaCyc MetaCyc REACTION RHEA:18184 Rhea reaction 1 1 1 1 KEGG:R00475 METACYC:RXN-969 RHEA:25314 reaction UPa:UCR00475 O(2) + glycolate = H(2)O(2) + glyoxylate 1 LR 1 KEGG:R00475 KEGG reaction METACYC:RXN-969 MetaCyc MetaCyc REACTION RHEA:25314 Rhea reaction 1 1 1 1 KEGG:R00476 METACYC:GLYCOLATEDEHYDRO-RXN RHEA:21267 reaction UPa:UCR00476 acceptor + glycolate = glyoxylate + reduced acceptor 1 LR 1 KEGG:R00476 KEGG reaction METACYC:GLYCOLATEDEHYDRO-RXN Rhea MetaCyc REACTION RHEA:21267 Rhea reaction 1 1 1 KEGG:R00479 METACYC:ISOCIT-CLEAV-RXN RHEA:13248 reaction UPa:UCR00479 isocitrate = glyoxylate + succinate 1 LR 1 KEGG:R00479 KEGG reaction METACYC:ISOCIT-CLEAV-RXN Rhea MetaCyc REACTION RHEA:13248 Rhea reaction 1 1 1 1 KEGG:R00480 METACYC:ASPARTATEKIN-RXN RHEA:23779 reaction UPa:UCR00480 ATP + L-aspartate = 4-phospho-L-aspartate + ADP 1 1 1 LR 1 LR 1 LR 1 KEGG:R00480 KEGG reaction METACYC:ASPARTATEKIN-RXN Rhea MetaCyc REACTION RHEA:23779 Rhea reaction 1 1 1 1 KEGG:R00481 RHEA:25879 reaction UPa:UCR00481 L-aspartate + O(2) = H(2)O(2) + iminoaspartate 1 LR 1 KEGG:R00481 KEGG reaction RHEA:25879 Rhea reaction 1 1 1 1 1 1 KEGG:R00483 METACYC:ASNSYNA-RXN RHEA:11375 reaction UPa:UCR00483 ATP + L-aspartate + NH(3) = AMP + L-asparagine + diphosphate 1 LR 1 KEGG:R00483 KEGG reaction METACYC:ASNSYNA-RXN MetaCyc MetaCyc REACTION RHEA:11375 Rhea reaction 1 1 1 KEGG:R00489 METACYC:ASPDECARBOX-RXN RHEA:19500 reaction UPa:UCR00489 L-aspartate = CO(2) + beta-alanine 1 LR 1 KEGG:R00489 KEGG reaction METACYC:ASPDECARBOX-RXN MetaCyc MetaCyc REACTION RHEA:19500 Rhea reaction 1 1 1 1 1 1 KEGG:R00497 METACYC:GLUTATHIONE-SYN-RXN RHEA:13560 reaction UPa:UCR00497 ATP + L-gamma-glutamyl-L-cysteine + glycine = ADP + glutathione + phosphate 1 LR 1 KEGG:R00497 KEGG reaction METACYC:GLUTATHIONE-SYN-RXN MetaCyc MetaCyc REACTION RHEA:13560 Rhea reaction 1 1 1 1 KEGG:R00509 METACYC:ADENYLYLSULFKIN-RXN RHEA:24155 reaction UPa:UCR00509 5'-adenylyl sulfate + ATP = 3'-phospho-5'-adenylyl sulfate + ADP 1 LR 1 KEGG:R00509 KEGG reaction METACYC:ADENYLYLSULFKIN-RXN Rhea MetaCyc REACTION RHEA:24155 Rhea reaction 1 1 1 1 KEGG:R00512 METACYC:RXN-11832 RHEA:11603 reaction UPa:UCR00512 ATP + CMP = ADP + CDP 1 LR 1 KEGG:R00512 KEGG reaction METACYC:RXN-11832 Rhea MetaCyc REACTION RHEA:11603 Rhea reaction 1 1 1 1 KEGG:R00513 METACYC:CYTIKIN-RXN RHEA:24677 reaction UPa:UCR00513 ATP + cytidine = ADP + CMP 1 LR 1 KEGG:R00513 KEGG reaction METACYC:CYTIKIN-RXN Rhea MetaCyc REACTION RHEA:24677 Rhea reaction 1 1 1 1 KEGG:R00525 METACYC:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN RHEA:12479 reaction UPa:UCR00525 H(2)O + N-formyl-L-glutamate = L-glutamate + formate 1 LR 1 KEGG:R00525 KEGG reaction METACYC:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN MetaCyc MetaCyc REACTION RHEA:12479 Rhea reaction 1 1 1 1 KEGG:R00527 METACYC:S-FORMYLGLUTATHIONE-HYDROLASE-RXN RHEA:14964 reaction UPa:UCR00527 H(2)O + S-formylglutathione = formate + glutathione 1 LR 1 KEGG:R00527 KEGG reaction METACYC:S-FORMYLGLUTATHIONE-HYDROLASE-RXN MetaCyc MetaCyc REACTION RHEA:14964 Rhea reaction 1 1 1 1 KEGG:R00529 METACYC:SULFATE-ADENYLYLTRANS-RXN RHEA:18136 reaction UPa:UCR00529 ATP + sulfate = 5'-adenylyl sulfate + diphosphate 1 LR 1 KEGG:R00529 KEGG reaction METACYC:SULFATE-ADENYLYLTRANS-RXN Rhea MetaCyc REACTION RHEA:18136 Rhea reaction 1 1 1 1 KEGG:R00549 METACYC:RIBOFLAVINKIN-RXN RHEA:14360 reaction UPa:UCR00549 ATP + riboflavin = ADP + FMN 1 LR 1 KEGG:R00549 KEGG reaction METACYC:RIBOFLAVINKIN-RXN MetaCyc MetaCyc REACTION RHEA:14360 Rhea reaction 1 1 1 1 KEGG:R00551 METACYC:ARGINASE-RXN RHEA:20572 reaction UPa:UCR00551 H(2)O + L-arginine = L-ornithine + urea 1 LR 1 KEGG:R00551 KEGG reaction METACYC:ARGINASE-RXN Rhea MetaCyc REACTION RHEA:20572 Rhea reaction 1 1 1 1 KEGG:R00552 METACYC:ARGININE-DEIMINASE-RXN RHEA:19600 reaction UPa:UCR00552 H(2)O + L-arginine = L-citrulline + NH(3) 1 LR 1 KEGG:R00552 KEGG reaction METACYC:ARGININE-DEIMINASE-RXN Rhea MetaCyc REACTION RHEA:19600 Rhea reaction 1 1 1 1 KEGG:R00565 METACYC:GLYCINE-AMIDINOTRANSFERASE-RXN RHEA:13204 reaction UPa:UCR00565 L-arginine + glycine = L-ornithine + guanidinoacetate 1 LR 1 KEGG:R00565 KEGG reaction METACYC:GLYCINE-AMIDINOTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:13204 Rhea reaction 1 1 1 KEGG:R00566 METACYC:ARGDECARBOX-RXN RHEA:17644 reaction UPa:UCR00566 L-arginine = CO(2) + agmatine 1 LR 1 KEGG:R00566 KEGG reaction METACYC:ARGDECARBOX-RXN Rhea MetaCyc REACTION RHEA:17644 Rhea reaction 1 1 1 1 KEGG:R00570 METACYC:CDPKIN-RXN RHEA:25240 reaction UPa:UCR00570 ATP + CDP = ADP + CTP 1 LR 1 KEGG:R00570 KEGG reaction METACYC:CDPKIN-RXN MetaCyc MetaCyc REACTION RHEA:25240 Rhea reaction 1 1 1 1 1 1 KEGG:R00571 RHEA:16600 reaction UPa:UCR00571 ATP + NH(3) + UTP = ADP + CTP + phosphate 1 LR 1 KEGG:R00571 KEGG reaction RHEA:16600 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R00575 METACYC:CARBPSYN-RXN RHEA:18636 reaction UPa:UCR00575 2 ATP + H(2)O + L-glutamine + bicarbonate = 2 ADP + L-glutamate + carbamoyl phosphate + phosphate 1 1 LR 1 LR 1 KEGG:R00575 KEGG reaction METACYC:CARBPSYN-RXN Rhea MetaCyc REACTION RHEA:18636 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R00578 METACYC:ASNSYNB-RXN RHEA:12231 reaction UPa:UCR00578 ATP + H(2)O + L-aspartate + L-glutamine = AMP + L-asparagine + L-glutamate + diphosphate 1 LR 1 KEGG:R00578 KEGG reaction METACYC:ASNSYNB-RXN MetaCyc MetaCyc REACTION RHEA:12231 Rhea reaction 1 1 1 1 KEGG:R00582 METACYC:RXN0-5114 RHEA:21211 reaction UPa:UCR00582 H(2)O + O-phospho-L-serine = L-serine + phosphate 1 LR 1 KEGG:R00582 KEGG reaction METACYC:RXN0-5114 MetaCyc MetaCyc REACTION RHEA:21211 Rhea reaction 1 1 1 1 KEGG:R00585 METACYC:SERINE--PYRUVATE-AMINOTRANSFERASE-RXN RHEA:22855 reaction UPa:UCR00585 L-serine + pyruvate = 3-hydroxypyruvate + L-alanine 1 LR 1 KEGG:R00585 KEGG reaction METACYC:SERINE--PYRUVATE-AMINOTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:22855 Rhea reaction 1 1 1 1 KEGG:R00586 METACYC:SERINE-O-ACETTRAN-RXN RHEA:24563 reaction UPa:UCR00586 L-serine + acetyl-CoA = CoA + O-acetyl-L-serine 1 LR 1 KEGG:R00586 KEGG reaction METACYC:SERINE-O-ACETTRAN-RXN Rhea MetaCyc REACTION RHEA:24563 Rhea reaction 1 1 1 1 1 KEGG:R00605 METACYC:METHANOL-DEHYDROGENASE-RXN RHEA:19404 reaction UPa:UCR00605 NAD(+) + methanol = H(+) + NADH + formaldehyde 1 LR 1 KEGG:R00605 KEGG reaction METACYC:METHANOL-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:19404 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00606 METACYC:RXN-2841 RHEA:30210 reaction UPa:UCR00606 H(2)O + amicyanin + methylamine = 2 H(+) + NH(3) + formaldehyde + reduced amicyanin 1 LR 1 KEGG:R00606 KEGG reaction METACYC:RXN-2841 MetaCyc MetaCyc REACTION RHEA:30210 Rhea reaction 1 1 1 1 1 1 KEGG:R00611 METACYC:SARCOSINE-DEHYDROGENASE-RXN RHEA:19796 reaction UPa:UCR00611 H(2)O + electron-transferring flavoprotein + sarcosine = formaldehyde + glycine + reduced electron-transferring flavoprotein 1 LR 1 KEGG:R00611 KEGG reaction METACYC:SARCOSINE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:19796 Rhea reaction 1 1 1 1 KEGG:R00617 METACYC:THI-P-KIN-RXN RHEA:15916 reaction UPa:UCR00617 ATP + thiamine phosphate = ADP + thiamine diphosphate 1 LR 1 KEGG:R00617 KEGG reaction METACYC:THI-P-KIN-RXN MetaCyc MetaCyc REACTION RHEA:15916 Rhea reaction 1 1 1 1 KEGG:R00619 METACYC:THIAMIN-PYROPHOSPHOKINASE-RXN RHEA:11579 reaction UPa:UCR00619 ATP + thiamine = AMP + thiamine diphosphate 1 LR 1 KEGG:R00619 KEGG reaction METACYC:THIAMIN-PYROPHOSPHOKINASE-RXN MetaCyc MetaCyc REACTION RHEA:11579 Rhea reaction 1 1 1 1 1 KEGG:R00640 METACYC:GALACTONOLACTONE-DEHYDROGENASE-RXN RHEA:14760 reaction UPa:UCR00640 L-Galactono-1,4-lactone + 2 ferricytochrome c = 2 H(+) + L-ascorbate + 2 ferrocytochrome c 1 LR 1 KEGG:R00640 KEGG reaction METACYC:GALACTONOLACTONE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:14760 Rhea reaction 1 1 KEGG:R00647 METACYC:RXN-8784 RHEA:15272 reaction UPa:UCR00647 L-ascorbate = L-xylo-hexulonolactone 1 RL 2 KEGG:R00647 KEGG reaction METACYC:RXN-8784 MetaCyc MetaCyc REACTION RHEA:15272 Rhea reaction 1 1 1 KEGG:R00658 METACYC:2PGADEHYDRAT-RXN RHEA:10167 reaction UPa:UCR00658 2-phospho-D-glycerate = H(2)O + phosphoenolpyruvate 1 LR 1 KEGG:R00658 KEGG reaction METACYC:2PGADEHYDRAT-RXN Rhea MetaCyc REACTION RHEA:10167 Rhea reaction 1 1 1 1 KEGG:R00667 METACYC:ORNITHINE-GLU-AMINOTRANSFORASE-RXN RHEA:25163 reaction UPa:UCR00667 2-oxoglutarate + L-ornithine = L-glutamate + L-glutamate 5-semialdehyde 1 LR 1 KEGG:R00667 KEGG reaction METACYC:ORNITHINE-GLU-AMINOTRANSFORASE-RXN Rhea MetaCyc REACTION RHEA:25163 Rhea reaction 1 1 1 1 KEGG:R00669 METACYC:ACETYLORNDEACET-RXN RHEA:15944 reaction UPa:UCR00669 H(2)O + N(2)-acetyl-L-ornithine = L-ornithine + acetate 1 LR 1 KEGG:R00669 KEGG reaction METACYC:ACETYLORNDEACET-RXN Rhea MetaCyc REACTION RHEA:15944 Rhea reaction 1 1 1 KEGG:R00670 METACYC:ORNDECARBOX-RXN RHEA:22967 reaction UPa:UCR00670 L-ornithine = CO(2) + putrescine 1 LR 1 KEGG:R00670 KEGG reaction METACYC:ORNDECARBOX-RXN MetaCyc MetaCyc REACTION RHEA:22967 Rhea reaction 1 1 1 KEGG:R00671 METACYC:ORNITHINE-CYCLODEAMINASE-RXN RHEA:24371 reaction UPa:UCR00671 L-ornithine = L-proline + NH(3) 1 LR 1 KEGG:R00671 KEGG reaction METACYC:ORNITHINE-CYCLODEAMINASE-RXN MetaCyc MetaCyc REACTION RHEA:24371 Rhea reaction 1 1 1 1 1 KEGG:R00673 METACYC:TRYPTOPHAN-RXN RHEA:19556 reaction UPa:UCR00673 H(2)O + L-tryptophan = NH(3) + indole + pyruvate 1 LR 1 KEGG:R00673 KEGG reaction METACYC:TRYPTOPHAN-RXN Rhea MetaCyc REACTION RHEA:19556 Rhea reaction 1 1 1 1 KEGG:R00674 METACYC:RXN0-2382 RHEA:26437 reaction UPa:UCR00674 L-serine + indole = H(2)O + L-tryptophan 1 LR 2 KEGG:R00674 KEGG reaction METACYC:RXN0-2382 MetaCyc MetaCyc REACTION RHEA:26437 Rhea reaction 1 1 1 KEGG:R00678 METACYC:RXN-8665 RHEA:24539 reaction UPa:UCR00678 L-tryptophan + O(2) = N-formyl-N-kynurenine 1 LR 1 KEGG:R00678 KEGG reaction METACYC:RXN-8665 MetaCyc MetaCyc REACTION RHEA:24539 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00688 METACYC:PHENYLALANINE-DEHYDROGENASE-RXN RHEA:21411 reaction UPa:UCR00688 H(2)O + L-phenylalanine + NAD(+) = H(+) + NADH + NH(3) + phenylpyruvate 1 RL 1 KEGG:R00688 KEGG reaction METACYC:PHENYLALANINE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:21411 Rhea reaction 1 1 1 1 KEGG:R00691 METACYC:CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN RHEA:12539 reaction UPa:UCR00691 L-arogenate = CO(2) + H(2)O + L-phenylalanine 1 LR 1 KEGG:R00691 KEGG reaction METACYC:CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:12539 Rhea reaction 1 1 1 1 KEGG:R00694 METACYC:PHEAMINOTRANS-RXN RHEA:25155 reaction UPa:UCR00694 2-oxoglutarate + L-phenylalanine = L-glutamate + phenylpyruvate 1 RL 1 KEGG:R00694 KEGG reaction METACYC:PHEAMINOTRANS-RXN Rhea MetaCyc REACTION RHEA:25155 Rhea reaction 1 1 1 KEGG:R00697 METACYC:PHENYLALANINE-AMMONIA-LYASE-RXN RHEA:21387 reaction UPa:UCR00697 L-phenylalanine = NH(3) + trans-cinnamate 1 LR 1 KEGG:R00697 KEGG reaction METACYC:PHENYLALANINE-AMMONIA-LYASE-RXN MetaCyc MetaCyc REACTION RHEA:21387 Rhea reaction 1 1 1 KEGG:R00699 METACYC:PHENYLALANINE-DECARBOXYLASE-RXN RHEA:19720 reaction UPa:UCR00699 L-phenylalanine = 2-phenylethylamine + CO(2) 1 LR 1 KEGG:R00699 KEGG reaction METACYC:PHENYLALANINE-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:19720 Rhea reaction 1 1 1 1 1 KEGG:R00703 METACYC:L-LACTATE-DEHYDROGENASE-RXN RHEA:23447 reaction UPa:UCR00703 (S)-lactate + NAD(+) = H(+) + NADH + pyruvate 1 RL 1 KEGG:R00703 KEGG reaction METACYC:L-LACTATE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:23447 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00705 METACYC:RXN-2902 RHEA:22995 reaction UPa:UCR00705 3-oxopropanoate + CoA + NAD(+) = CO(2) + H(+) + NADH + acetyl-CoA 1 LR 1 KEGG:R00705 KEGG reaction METACYC:RXN-2902 MetaCyc MetaCyc REACTION RHEA:22995 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00706 METACYC:1.2.1.18-RXN RHEA:22991 reaction UPa:UCR00706 3-oxopropanoate + CoA + NADP(+) = CO(2) + H(+) + NADPH + acetyl-CoA 1 LR 1 KEGG:R00706 KEGG reaction METACYC:1.2.1.18-RXN Rhea MetaCyc REACTION RHEA:22991 Rhea reaction 1 1 1 1 1 1 KEGG:R00707 METACYC:PYRROLINECARBDEHYDROG-RXN METACYC:RXN-11632 RHEA:16420 RHEA:24893 reaction UPa:UCR00707 (S)-1-pyrroline-5-carboxylic acid + 2 H(2)O + NAD(+) = H(+) + L-glutamate + NADH 1 LR 1 KEGG:R00707 KEGG reaction METACYC:PYRROLINECARBDEHYDROG-RXN MetaCyc MetaCyc REACTION METACYC:RXN-11632 MetaCyc Rhea MetaCyc REACTION RHEA:16420 Rhea reaction RHEA:24893 Rhea reaction 1 1 1 1 1 1 KEGG:R00709 METACYC:ISOCITRATE-DEHYDROGENASE-NAD+-RXN METACYC:RXN-7969 RHEA:23635 reaction UPa:UCR00709 NAD(+) + isocitrate = 2-oxoglutarate + CO(2) + H(+) + NADH 1 LR 1 KEGG:R00709 KEGG reaction METACYC:ISOCITRATE-DEHYDROGENASE-NAD+-RXN MetaCyc MetaCyc REACTION METACYC:RXN-7969 MetaCyc Rhea MetaCyc REACTION RHEA:23635 Rhea reaction 1 1 1 1 1 1 KEGG:R00710 METACYC:RXN66-3 RHEA:25297 reaction UPa:UCR00710 H(2)O + NAD(+) + acetaldehyde = H(+) + NADH + acetate 1 LR 1 KEGG:R00710 KEGG reaction METACYC:RXN66-3 MetaCyc MetaCyc REACTION RHEA:25297 Rhea reaction 1 1 1 1 1 1 KEGG:R00713 METACYC:SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN RHEA:13220 reaction UPa:UCR00713 H(2)O + NAD(+) + succinate semialdehyde = H(+) + NADH + succinate 1 LR 1 KEGG:R00713 KEGG reaction METACYC:SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:13220 Rhea reaction 1 1 1 1 1 1 KEGG:R00714 METACYC:SUCCSEMIALDDEHYDROG-RXN RHEA:13216 reaction UPa:UCR00714 H(2)O + NADP(+) + succinate semialdehyde = H(+) + NADPH + succinate 1 LR 1 KEGG:R00714 KEGG reaction METACYC:SUCCSEMIALDDEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:13216 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00715 METACYC:1.5.1.7-RXN RHEA:12443 reaction UPa:UCR00715 H(2)O + NAD(+) + saccharopine = 2-oxoglutarate + H(+) + L-lysine + NADH 1 LR 1 KEGG:R00715 KEGG reaction METACYC:1.5.1.7-RXN MetaCyc MetaCyc REACTION RHEA:12443 Rhea reaction 1 1 1 1 1 1 1 KEGG:R00716 METACYC:1.5.1.8-RXN RHEA:19376 reaction UPa:UCR00716 H(2)O + NADP(+) + saccharopine = 2-oxoglutarate + H(+) + L-lysine + NADPH 1 RL 1 KEGG:R00716 KEGG reaction METACYC:1.5.1.8-RXN MetaCyc MetaCyc REACTION RHEA:19376 Rhea reaction 1 1 1 1 KEGG:R00731 RHEA:34286 reaction UPa:UCR00731 L-tyrosine + O(2) = H(2)O + L-dopa 1 LR 1 KEGG:R00731 KEGG reaction RHEA:34286 Rhea reaction 1 1 1 1 1 1 KEGG:R00732 METACYC:CYCLOHEXADIENYL-DEHYDROGENASE-RXN RHEA:12259 reaction UPa:UCR00732 L-arogenate + NAD(+) = CO(2) + H(+) + L-tyrosine + NADH 1 LR 1 KEGG:R00732 KEGG reaction METACYC:CYCLOHEXADIENYL-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:12259 Rhea reaction 1 1 1 1 1 1 KEGG:R00733 METACYC:RXN-5682 RHEA:15420 reaction UPa:UCR00733 L-arogenate + NADP(+) = CO(2) + H(+) + L-tyrosine + NADPH 1 LR 1 KEGG:R00733 KEGG reaction METACYC:RXN-5682 MetaCyc MetaCyc REACTION RHEA:15420 Rhea reaction 1 1 1 1 KEGG:R00734 METACYC:TYROSINE-AMINOTRANSFERASE-RXN RHEA:15096 reaction UPa:UCR00734 2-oxoglutarate + L-tyrosine = (4-hydroxyphenyl)pyruvate + L-glutamate 1 1 LR 1 RL 1 KEGG:R00734 KEGG reaction METACYC:TYROSINE-AMINOTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:15096 Rhea reaction 1 1 1 1 1 1 KEGG:R00742 METACYC:ACETYL-COA-CARBOXYLTRANSFER-RXN RHEA:11311 reaction UPa:UCR00742 ATP + acetyl-CoA + bicarbonate = ADP + malonyl-CoA + phosphate 1 LR 1 KEGG:R00742 KEGG reaction METACYC:ACETYL-COA-CARBOXYLTRANSFER-RXN MetaCyc MetaCyc REACTION RHEA:11311 Rhea reaction 1 1 1 KEGG:R00750 METACYC:MHPELY-RXN RHEA:22627 reaction UPa:UCR00750 acetaldehyde + pyruvate = 4-hydroxy-2-oxopentanoate 1 1 RL 1 RL 1 KEGG:R00750 KEGG reaction METACYC:MHPELY-RXN Rhea MetaCyc REACTION RHEA:22627 Rhea reaction 1 1 1 KEGG:R00751 METACYC:THREONINE-ALDOLASE-RXN RHEA:19628 reaction UPa:UCR00751 L-threonine = acetaldehyde + glycine 1 LR 1 KEGG:R00751 KEGG reaction METACYC:THREONINE-ALDOLASE-RXN MetaCyc MetaCyc REACTION RHEA:19628 Rhea reaction 1 1 1 1 1 KEGG:R00754 METACYC:ALCOHOL-DEHYDROG-RXN RHEA:25293 reaction UPa:UCR00754 NAD(+) + ethanol = H(+) + NADH + acetaldehyde 1 LR 1 KEGG:R00754 KEGG reaction METACYC:ALCOHOL-DEHYDROG-RXN Rhea MetaCyc REACTION RHEA:25293 Rhea reaction 1 1 1 1 KEGG:R00756 METACYC:6PFRUCTPHOS-RXN RHEA:16112 reaction UPa:UCR00756 ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate 1 LR 1 KEGG:R00756 KEGG reaction METACYC:6PFRUCTPHOS-RXN MetaCyc MetaCyc REACTION RHEA:16112 Rhea reaction 1 1 1 1 KEGG:R00765 METACYC:GLUCOSAMINE-6-P-DEAMIN-RXN RHEA:12175 reaction UPa:UCR00765 H(2)O + alpha-D-glucosamine 6-phosphate = D-fructose 6-phosphate + NH(3) 1 LR 1 KEGG:R00765 KEGG reaction METACYC:GLUCOSAMINE-6-P-DEAMIN-RXN Rhea MetaCyc REACTION RHEA:12175 Rhea reaction 1 1 1 1 KEGG:R00766 METACYC:SUCROSE-PHOSPHATE-SYNTHASE-RXN RHEA:22175 reaction UPa:UCR00766 D-fructose 6-phosphate + UDP-alpha-D-glucose = UDP + sucrose 6-phosphate 1 LR 1 KEGG:R00766 KEGG reaction METACYC:SUCROSE-PHOSPHATE-SYNTHASE-RXN MetaCyc MetaCyc REACTION RHEA:22175 Rhea reaction 1 1 1 1 KEGG:R00768 METACYC:L-GLN-FRUCT-6-P-AMINOTRANS-RXN RHEA:13240 reaction UPa:UCR00768 D-fructose 6-phosphate + L-glutamine = L-glutamate + alpha-D-glucosamine 6-phosphate 1 LR 1 KEGG:R00768 KEGG reaction METACYC:L-GLN-FRUCT-6-P-AMINOTRANS-RXN MetaCyc MetaCyc REACTION RHEA:13240 Rhea reaction 1 1 KEGG:R00771 METACYC:PGLUCISOM-RXN METACYC:RXN-6182 RHEA:11819 reaction UPa:UCR00771 D-glucose 6-phosphate = D-fructose 6-phosphate 1 LR 1 KEGG:R00771 KEGG reaction METACYC:PGLUCISOM-RXN Rhea MetaCyc REACTION METACYC:RXN-6182 MetaCyc Rhea MetaCyc REACTION RHEA:11819 Rhea reaction 1 1 KEGG:R00772 METACYC:MANNPISOM-RXN RHEA:12359 reaction UPa:UCR00772 D-mannose 6-phosphate = D-fructose 6-phosphate 1 RL 1 KEGG:R00772 KEGG reaction METACYC:MANNPISOM-RXN Rhea MetaCyc REACTION RHEA:12359 Rhea reaction 1 1 1 1 1 1 KEGG:R00774 METACYC:UREA-CARBOXYLASE-RXN RHEA:20899 reaction UPa:UCR00774 ATP + bicarbonate + urea = ADP + phosphate + urea-1-carboxylate 1 LR 1 KEGG:R00774 KEGG reaction METACYC:UREA-CARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:20899 Rhea reaction 1 1 1 1 1 1 KEGG:R00783 METACYC:NITRITE-REDUCTASE-CYTOCHROME-RXN RHEA:15236 reaction UPa:UCR00783 H(2)O + ferricytochrome c + nitric oxide = H(+) + ferrocytochrome c + nitrite 1 RL 1 KEGG:R00783 KEGG reaction METACYC:NITRITE-REDUCTASE-CYTOCHROME-RXN MetaCyc Rhea MetaCyc REACTION RHEA:15236 Rhea reaction 1 1 1 1 1 KEGG:R00798 METACYC:NITRATREDUCT-RXN RHEA:21071 reaction UPa:UCR00798 H(2)O + acceptor + nitrite = nitrate + reduced acceptor 1 RL 1 KEGG:R00798 KEGG reaction METACYC:NITRATREDUCT-RXN Rhea MetaCyc REACTION RHEA:21071 Rhea reaction 1 1 1 1 KEGG:R00805 METACYC:SUCROSE-PHOSPHATASE-RXN RHEA:19292 reaction UPa:UCR00805 H(2)O + sucrose 6-phosphate = phosphate + sucrose 1 LR 1 KEGG:R00805 KEGG reaction METACYC:SUCROSE-PHOSPHATASE-RXN MetaCyc MetaCyc REACTION RHEA:19292 Rhea reaction 1 1 1 1 1 KEGG:R00812 METACYC:1.3.1.19-RXN RHEA:15460 reaction UPa:UCR00812 NAD(+) + cis-1,2-dihydrobenzene-1,2-diol = H(+) + NADH + catechol 1 LR 1 KEGG:R00812 KEGG reaction METACYC:1.3.1.19-RXN MetaCyc MetaCyc REACTION RHEA:15460 Rhea reaction 1 1 1 1 1 1 KEGG:R00813 METACYC:1.3.1.25-RXN RHEA:11563 reaction UPa:UCR00813 (1R,6S)-1,6-dihydroxycyclohexa-2,4-dienecarboxylic acid + NAD(+) = CO(2) + H(+) + NADH + catechol 1 LR 1 KEGG:R00813 KEGG reaction METACYC:1.3.1.25-RXN MetaCyc MetaCyc REACTION RHEA:11563 Rhea reaction 1 1 1 KEGG:R00817 METACYC:CATECHOL-12-DIOXYGENASE-RXN RHEA:23855 reaction UPa:UCR00817 O(2) + catechol = cis,cis-muconate 1 LR 1 KEGG:R00817 KEGG reaction METACYC:CATECHOL-12-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:23855 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R00823 RHEA:11079 reaction UPa:UCR00823 H(+) + NADH + O(2) + anthranilate = CO(2) + NAD(+) + NH(3) + catechol 1 LR 1 KEGG:R00823 KEGG reaction RHEA:11079 Rhea reaction 1 1 1 1 KEGG:R00829 METACYC:RXN-3641 RHEA:19484 reaction UPa:UCR00829 acetyl-CoA + succinyl-CoA = 3-oxoadipyl-CoA + CoA 1 RL 1 KEGG:R00829 KEGG reaction METACYC:RXN-3641 MetaCyc MetaCyc REACTION RHEA:19484 Rhea reaction 1 1 1 1 1 KEGG:R00830 METACYC:5-AMINOLEVULINIC-ACID-SYNTHASE-RXN RHEA:12924 reaction UPa:UCR00830 glycine + succinyl-CoA = 5-aminolevulinate + CO(2) + CoA 1 LR 1 KEGG:R00830 KEGG reaction METACYC:5-AMINOLEVULINIC-ACID-SYNTHASE-RXN MetaCyc MetaCyc REACTION RHEA:12924 Rhea reaction 1 1 1 1 KEGG:R00832 METACYC:ARGININE-N-SUCCINYLTRANSFERASE-RXN RHEA:15188 reaction UPa:UCR00832 L-arginine + succinyl-CoA = CoA + N(2)-succinyl-L-arginine 1 LR 1 KEGG:R00832 KEGG reaction METACYC:ARGININE-N-SUCCINYLTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:15188 Rhea reaction 1 1 KEGG:R00833 METACYC:METHYLMALONYL-COA-MUT-RXN RHEA:22891 reaction UPa:UCR00833 (R)-methylmalonyl-CoA = succinyl-CoA 1 LR 1 KEGG:R00833 KEGG reaction METACYC:METHYLMALONYL-COA-MUT-RXN Rhea MetaCyc REACTION RHEA:22891 Rhea reaction 1 1 1 1 1 KEGG:R00835 METACYC:RXN-14819 RHEA:15844 reaction UPa:UCR00835 D-glucose 6-phosphate + NADP(+) = D-glucono-1,5-lactone 6-phosphate + H(+) + NADPH 1 LR 1 KEGG:R00835 KEGG reaction METACYC:RXN-14819 MetaCyc Rhea MetaCyc REACTION RHEA:15844 Rhea reaction 1 1 1 1 KEGG:R00847 METACYC:GLYCEROL-KIN-RXN RHEA:21647 reaction UPa:UCR00847 ATP + glycerol = ADP + sn-glycerol 3-phosphate 1 LR 1 KEGG:R00847 KEGG reaction METACYC:GLYCEROL-KIN-RXN Rhea MetaCyc REACTION RHEA:21647 Rhea reaction 1 1 1 1 KEGG:R00849 RHEA:18980 reaction UPa:UCR00849 Quinone + sn-glycerol 3-phosphate = Hydroquinone + glycerone phosphate 1 1 LR 1 LR 1 KEGG:R00849 KEGG reaction RHEA:18980 Rhea reaction 1 1 1 1 KEGG:R00851 METACYC:RXN-1381 RHEA:15328 reaction UPa:UCR00851 acyl-CoA + sn-glycerol 3-phosphate = 1-acyl-sn-glycerol 3-phosphate + CoA 1 LR 1 KEGG:R00851 KEGG reaction METACYC:RXN-1381 MetaCyc MetaCyc REACTION RHEA:15328 Rhea reaction 1 1 1 1 1 1 KEGG:R00858 METACYC:SULFITE-REDUCT-RXN RHEA:13804 reaction UPa:UCR00858 3 H(2)O + 3 NADP(+) + hydrogen sulfide = 3 H(+) + 3 NADPH + sulfite 1 RL 1 KEGG:R00858 KEGG reaction METACYC:SULFITE-REDUCT-RXN MetaCyc MetaCyc REACTION RHEA:13804 Rhea reaction 1 1 1 1 1 1 KEGG:R00859 METACYC:SULFITE-REDUCTASE-FERREDOXIN-RXN RHEA:23135 reaction UPa:UCR00859 3 H(2)O + hydrogen sulfide + 6 oxidized ferredoxin = 6 H(+) + 6 reduced ferredoxin + sulfite 1 RL 1 KEGG:R00859 KEGG reaction METACYC:SULFITE-REDUCTASE-FERREDOXIN-RXN MetaCyc MetaCyc REACTION RHEA:23135 Rhea reaction 1 1 1 1 KEGG:R00874 METACYC:1.1.99.28-RXN RHEA:20640 reaction UPa:UCR00874 D-fructose + D-glucose = D-glucono-1,5-lactone + D-sorbitol 1 LR 1 KEGG:R00874 KEGG reaction METACYC:1.1.99.28-RXN MetaCyc MetaCyc REACTION RHEA:20640 Rhea reaction 1 1 1 1 KEGG:R00883 METACYC:MANNPGUANYLTRANGDP-RXN RHEA:12908 reaction UPa:UCR00883 GDP + alpha-D-mannose 1-phosphate = GDP-alpha-D-mannose + phosphate 1 LR 1 KEGG:R00883 KEGG reaction METACYC:MANNPGUANYLTRANGDP-RXN Rhea MetaCyc REACTION RHEA:12908 Rhea reaction 1 1 1 1 KEGG:R00885 METACYC:2.7.7.13-RXN RHEA:15232 reaction UPa:UCR00885 GTP + alpha-D-mannose 1-phosphate = GDP-alpha-D-mannose + diphosphate 1 LR 1 KEGG:R00885 KEGG reaction METACYC:2.7.7.13-RXN MetaCyc MetaCyc REACTION RHEA:15232 Rhea reaction 1 1 1 KEGG:R00888 METACYC:GDPMANDEHYDRA-RXN RHEA:23823 reaction UPa:UCR00888 GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-D-mannose + H(2)O 1 LR 1 KEGG:R00888 KEGG reaction METACYC:GDPMANDEHYDRA-RXN MetaCyc MetaCyc REACTION RHEA:23823 Rhea reaction 1 1 1 KEGG:R00893 METACYC:CYSTEINE-DIOXYGENASE-RXN RHEA:20444 reaction UPa:UCR00893 L-cysteine + O(2) = 3-sulfino-L-alanine 1 LR 1 KEGG:R00893 KEGG reaction METACYC:CYSTEINE-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:20444 Rhea reaction 1 1 1 1 1 1 KEGG:R00894 METACYC:GLUTCYSLIG-RXN RHEA:13288 reaction UPa:UCR00894 ATP + L-cysteine + L-glutamate = ADP + L-gamma-glutamyl-L-cysteine + phosphate 1 LR 1 KEGG:R00894 KEGG reaction METACYC:GLUTCYSLIG-RXN MetaCyc MetaCyc REACTION RHEA:13288 Rhea reaction 1 1 1 1 KEGG:R00897 METACYC:ACSERLY-RXN RHEA:14832 reaction UPa:UCR00897 O-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate 1 LR 1 KEGG:R00897 KEGG reaction METACYC:ACSERLY-RXN Rhea MetaCyc REACTION RHEA:14832 Rhea reaction 1 1 1 1 KEGG:R00901 METACYC:CYSTEINE-LYASE-RXN RHEA:20919 reaction UPa:UCR00901 L-cysteine + sulfite = L-cysteate + hydrogen sulfide 1 LR 1 KEGG:R00901 KEGG reaction METACYC:CYSTEINE-LYASE-RXN Rhea MetaCyc REACTION RHEA:20919 Rhea reaction 1 1 1 1 KEGG:R00921 METACYC:PTAALT-RXN RHEA:28049 reaction UPa:UCR00921 phosphate + propanoyl-CoA = CoA + propanoyl phosphate 1 LR 1 KEGG:R00921 KEGG reaction METACYC:PTAALT-RXN MetaCyc MetaCyc REACTION RHEA:28049 Rhea reaction 1 1 1 1 1 KEGG:R00939 METACYC:DIHYDROFOLATEREDUCT-RXN RHEA:15012 reaction UPa:UCR00939 5,6,7,8-tetrahydrofolate + NADP(+) = 7,8-dihydrofolate + H(+) + NADPH 1 RL 1 KEGG:R00939 KEGG reaction METACYC:DIHYDROFOLATEREDUCT-RXN MetaCyc Rhea MetaCyc REACTION RHEA:15012 Rhea reaction 1 1 1 1 KEGG:R00944 METACYC:FORMYLTHFDEFORMYL-RXN RHEA:19836 reaction UPa:UCR00944 10-formyl-5,6,7,8-tetrahydrofolate + H(2)O = 5,6,7,8-tetrahydrofolate + formate 1 LR 1 KEGG:R00944 KEGG reaction METACYC:FORMYLTHFDEFORMYL-RXN MetaCyc MetaCyc REACTION RHEA:19836 Rhea reaction 1 1 1 1 1 KEGG:R00945 METACYC:GLYOHMETRANS-RXN RHEA:15484 reaction UPa:UCR00945 5,10-methylene-THF + H(2)O + glycine = 5,6,7,8-tetrahydrofolate + L-serine 1 1 LR 1 RL 1 KEGG:R00945 KEGG reaction METACYC:GLYOHMETRANS-RXN Rhea MetaCyc REACTION RHEA:15484 Rhea reaction 1 1 1 1 KEGG:R00946 METACYC:HOMOCYSMETB12-RXN RHEA:11175 reaction UPa:UCR00946 5-methyl-THF + L-homocysteine = 5,6,7,8-tetrahydrofolate + L-methionine 1 LR 1 KEGG:R00946 KEGG reaction METACYC:HOMOCYSMETB12-RXN MetaCyc MetaCyc REACTION RHEA:11175 Rhea reaction 1 1 1 1 KEGG:R00956 METACYC:2.7.7.33-RXN RHEA:18216 reaction UPa:UCR00956 CTP + alpha-D-glucose 1-phosphate = CDP-glucose + diphosphate 1 LR 1 KEGG:R00956 KEGG reaction METACYC:2.7.7.33-RXN Rhea MetaCyc REACTION RHEA:18216 Rhea reaction 1 1 1 1 KEGG:R00964 METACYC:URIDINEKIN-RXN RHEA:16828 reaction UPa:UCR00964 ATP + uridine = ADP + UMP 1 LR 1 KEGG:R00964 KEGG reaction METACYC:URIDINEKIN-RXN MetaCyc MetaCyc REACTION RHEA:16828 Rhea reaction 1 1 1 KEGG:R00965 METACYC:OROTPDECARB-RXN RHEA:11599 reaction UPa:UCR00965 orotidine 5'-phosphate = CO(2) + UMP 1 LR 1 KEGG:R00965 KEGG reaction METACYC:OROTPDECARB-RXN MetaCyc MetaCyc REACTION RHEA:11599 Rhea reaction 1 1 1 1 KEGG:R00966 METACYC:URACIL-PRIBOSYLTRANS-RXN RHEA:13020 reaction UPa:UCR00966 UMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + uracil 1 RL 1 KEGG:R00966 KEGG reaction METACYC:URACIL-PRIBOSYLTRANS-RXN Rhea MetaCyc REACTION RHEA:13020 Rhea reaction 1 1 1 1 KEGG:R00974 METACYC:CYTDEAM-RXN RHEA:20608 reaction UPa:UCR00974 H(2)O + cytosine = NH(3) + uracil 1 LR 1 KEGG:R00974 KEGG reaction METACYC:CYTDEAM-RXN MetaCyc MetaCyc REACTION RHEA:20608 Rhea reaction 1 1 1 1 1 KEGG:R00976 METACYC:URACIL-DEHYDROGENASE-RXN RHEA:22755 reaction UPa:UCR00976 H(2)O + acceptor + uracil = barbiturate + reduced acceptor 1 LR 1 KEGG:R00976 KEGG reaction METACYC:URACIL-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:22755 Rhea reaction 1 1 1 1 1 KEGG:R00985 reaction UPa:UCR00985 NH(3) + chorismate = H(2)O + anthranilate + pyruvate 1 LR 1 KEGG:R00985 KEGG reaction 1 1 1 1 KEGG:R00987 METACYC:KYNURENINASE-RXN RHEA:16816 reaction UPa:UCR00987 H(2)O + L-kynurenine = L-alanine + anthranilate 1 LR 1 KEGG:R00987 KEGG reaction METACYC:KYNURENINASE-RXN MetaCyc MetaCyc REACTION RHEA:16816 Rhea reaction 1 1 1 1 1 1 KEGG:R00994 RHEA:32718 reaction UPa:UCR00994 2-oxobutanoate + CO(2) + H(+) + NADH = D-erythro-3-methylmalic acid + NAD(+) 1 RL 1 KEGG:R00994 KEGG reaction RHEA:32718 Rhea reaction 1 1 1 KEGG:R00996 METACYC:THREDEHYD-RXN RHEA:22111 reaction UPa:UCR00996 L-threonine = 2-oxobutanoate + NH(3) 1 1 LR 1 LR 1 KEGG:R00996 KEGG reaction METACYC:THREDEHYD-RXN MetaCyc MetaCyc REACTION RHEA:22111 Rhea reaction 1 1 1 1 1 KEGG:R01001 METACYC:RXN-15130 RHEA:14008 reaction UPa:UCR01001 H(2)O + L-cystathionine = 2-oxobutanoate + L-cysteine + NH(3) 1 LR 1 KEGG:R01001 KEGG reaction METACYC:RXN-15130 MetaCyc MetaCyc REACTION RHEA:14008 Rhea reaction 1 1 1 1 KEGG:R01011 METACYC:GLYCERONE-KINASE-RXN RHEA:15776 reaction UPa:UCR01011 ATP + glycerone = ADP + glycerone phosphate 1 LR 1 KEGG:R01011 KEGG reaction METACYC:GLYCERONE-KINASE-RXN MetaCyc MetaCyc REACTION RHEA:15776 Rhea reaction 1 1 KEGG:R01015 METACYC:TRIOSEPISOMERIZATION-RXN RHEA:18588 reaction UPa:UCR01015 D-glyceraldehyde 3-phosphate = glycerone phosphate 1 RL 1 KEGG:R01015 KEGG reaction METACYC:TRIOSEPISOMERIZATION-RXN Rhea MetaCyc REACTION RHEA:18588 Rhea reaction 1 1 1 1 KEGG:R01021 METACYC:CHOLINE-KINASE-RXN RHEA:12840 reaction UPa:UCR01021 ATP + choline = ADP + phosphocholine 1 LR 1 KEGG:R01021 KEGG reaction METACYC:CHOLINE-KINASE-RXN MetaCyc MetaCyc REACTION RHEA:12840 Rhea reaction 1 1 1 1 KEGG:R01022 METACYC:CHOLINE-OXIDASE-RXN RHEA:13508 reaction UPa:UCR01022 O(2) + choline = H(2)O(2) + betaine aldehyde 1 LR 1 KEGG:R01022 KEGG reaction METACYC:CHOLINE-OXIDASE-RXN MetaCyc MetaCyc REACTION RHEA:13508 Rhea reaction 1 1 1 1 KEGG:R01025 METACYC:CHD-RXN RHEA:17436 reaction UPa:UCR01025 acceptor + choline = betaine aldehyde + reduced acceptor 1 LR 1 KEGG:R01025 KEGG reaction METACYC:CHD-RXN Rhea MetaCyc REACTION RHEA:17436 Rhea reaction 1 1 1 1 KEGG:R01028 METACYC:CHOLINE-SULFATASE-RXN RHEA:20823 reaction UPa:UCR01028 H(2)O + choline sulfate = choline + sulfate 1 LR 1 KEGG:R01028 KEGG reaction METACYC:CHOLINE-SULFATASE-RXN MetaCyc MetaCyc REACTION RHEA:20823 Rhea reaction 1 1 1 1 1 KEGG:R01034 METACYC:GLYCDEH-RXN RHEA:13772 reaction UPa:UCR01034 NAD(+) + glycerol = H(+) + NADH + glycerone 1 LR 1 KEGG:R01034 KEGG reaction METACYC:GLYCDEH-RXN Rhea MetaCyc REACTION RHEA:13772 Rhea reaction 1 1 1 KEGG:R01047 METACYC:GLYCEROL-DEHYDRATASE-RXN RHEA:19768 reaction UPa:UCR01047 glycerol = 3-hydroxypropanal + H(2)O 1 LR 1 KEGG:R01047 KEGG reaction METACYC:GLYCEROL-DEHYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:19768 Rhea reaction 1 1 1 1 KEGG:R01049 METACYC:PRPPSYN-RXN RHEA:15612 reaction UPa:UCR01049 ATP + D-ribose 5-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + AMP 1 LR 1 KEGG:R01049 KEGG reaction METACYC:PRPPSYN-RXN Rhea MetaCyc REACTION RHEA:15612 Rhea reaction 1 1 1 1 KEGG:R01051 METACYC:RIBOKIN-RXN RHEA:13700 reaction UPa:UCR01051 ATP + D-ribose = ADP + D-ribose 5-phosphate 1 LR 1 KEGG:R01051 KEGG reaction METACYC:RIBOKIN-RXN MetaCyc MetaCyc REACTION RHEA:13700 Rhea reaction 1 1 KEGG:R01056 METACYC:RIB5PISOM-RXN RHEA:14660 reaction UPa:UCR01056 D-ribose 5-phosphate = D-ribulose 5-phosphate 1 RL 1 KEGG:R01056 KEGG reaction METACYC:RIB5PISOM-RXN Rhea MetaCyc REACTION RHEA:14660 Rhea reaction 1 1 KEGG:R01057 METACYC:PPENTOMUT-RXN RHEA:18796 reaction UPa:UCR01057 alpha-D-ribose 1-phosphate = D-ribose 5-phosphate 1 RL 1 KEGG:R01057 KEGG reaction METACYC:PPENTOMUT-RXN Rhea MetaCyc REACTION RHEA:18796 Rhea reaction 1 1 1 1 1 1 KEGG:R01061 METACYC:GAPOXNPHOSPHN-RXN RHEA:10303 reaction UPa:UCR01061 D-glyceraldehyde 3-phosphate + NAD(+) + phosphate = 3-phospho-D-glyceroyl phosphate + H(+) + NADH 1 LR 1 KEGG:R01061 KEGG reaction METACYC:GAPOXNPHOSPHN-RXN Rhea MetaCyc REACTION RHEA:10303 Rhea reaction 1 1 1 KEGG:R01064 METACYC:DEHYDDEOXPHOSGALACT-ALDOL-RXN RHEA:24467 reaction UPa:UCR01064 6-phospho-2-dehydro-3-deoxy-D-galactonic acid = D-glyceraldehyde 3-phosphate + pyruvate 1 LR 1 KEGG:R01064 KEGG reaction METACYC:DEHYDDEOXPHOSGALACT-ALDOL-RXN Rhea MetaCyc REACTION RHEA:24467 Rhea reaction 1 1 1 KEGG:R01066 METACYC:DEOXYRIBOSE-P-ALD-RXN RHEA:12824 reaction UPa:UCR01066 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde 1 LR 1 KEGG:R01066 KEGG reaction METACYC:DEOXYRIBOSE-P-ALD-RXN Rhea MetaCyc REACTION RHEA:12824 Rhea reaction 1 1 1 KEGG:R01068 METACYC:F16ALDOLASE-RXN RHEA:14732 reaction UPa:UCR01068 D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + glycerone phosphate 1 LR 1 KEGG:R01068 KEGG reaction METACYC:F16ALDOLASE-RXN Rhea MetaCyc REACTION RHEA:14732 Rhea reaction 1 1 1 KEGG:R01069 METACYC:TAGAALDOL-RXN RHEA:22951 reaction UPa:UCR01069 D-tagatose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + glycerone phosphate 1 LR 1 KEGG:R01069 KEGG reaction METACYC:TAGAALDOL-RXN Rhea MetaCyc REACTION RHEA:22951 Rhea reaction 1 1 1 1 KEGG:R01071 METACYC:ATPPHOSPHORIBOSYLTRANS-RXN RHEA:18476 reaction UPa:UCR01071 1-(5-phospho-D-ribosyl)-ATP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + ATP 1 RL 1 KEGG:R01071 KEGG reaction METACYC:ATPPHOSPHORIBOSYLTRANS-RXN Rhea MetaCyc REACTION RHEA:18476 Rhea reaction 1 1 1 1 1 1 KEGG:R01072 METACYC:PRPPAMIDOTRANS-RXN RHEA:14908 reaction UPa:UCR01072 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + H(2)O + L-glutamine 1 RL 1 KEGG:R01072 KEGG reaction METACYC:PRPPAMIDOTRANS-RXN Rhea MetaCyc REACTION RHEA:14908 Rhea reaction 1 1 1 1 KEGG:R01073 METACYC:PRTRANS-RXN RHEA:11771 reaction UPa:UCR01073 N-(5-phospho-beta-D-ribosyl)anthranilic acid + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + anthranilate 1 RL 1 KEGG:R01073 KEGG reaction METACYC:PRTRANS-RXN Rhea MetaCyc REACTION RHEA:11771 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R01078 METACYC:2.8.1.6-RXN RHEA:22063 reaction UPa:UCR01078 2 H(+) + 2 S-adenosyl-L-methionine + dethiobiotin + 2 e- + sulfur donor = 2 5'-deoxyadenosine + 2 L-methionine + biotin 1 LR 1 KEGG:R01078 KEGG reaction METACYC:2.8.1.6-RXN MetaCyc MetaCyc REACTION RHEA:22063 Rhea reaction 1 1 1 1 KEGG:R01080 METACYC:URIDINE-NUCLEOSIDASE-RXN RHEA:15580 reaction UPa:UCR01080 H(2)O + uridine = D-ribose + uracil 1 LR 1 KEGG:R01080 KEGG reaction METACYC:URIDINE-NUCLEOSIDASE-RXN MetaCyc MetaCyc REACTION RHEA:15580 Rhea reaction 1 1 1 KEGG:R01082 METACYC:FUMHYDR-RXN RHEA:12463 reaction UPa:UCR01082 (S)-malate = H(2)O + fumarate 1 RL 1 KEGG:R01082 KEGG reaction METACYC:FUMHYDR-RXN Rhea MetaCyc REACTION RHEA:12463 Rhea reaction 1 1 1 KEGG:R01083 METACYC:AMPSYN-RXN RHEA:16856 reaction UPa:UCR01083 N(6)-(1,2-dicarboxyethyl)-AMP = AMP + fumarate 1 LR 1 KEGG:R01083 KEGG reaction METACYC:AMPSYN-RXN Rhea MetaCyc REACTION RHEA:16856 Rhea reaction 1 1 1 KEGG:R01086 METACYC:ARGSUCCINLYA-RXN RHEA:24023 reaction UPa:UCR01086 (N(omega)-L-arginino)succinate = L-arginine + fumarate 1 1 LR 1 LR 1 KEGG:R01086 KEGG reaction METACYC:ARGSUCCINLYA-RXN Rhea MetaCyc REACTION RHEA:24023 Rhea reaction 1 1 1 1 1 1 1 KEGG:R01088 METACYC:LEUCINE-DEHYDROGENASE-RXN RHEA:12223 reaction UPa:UCR01088 H(2)O + L-leucine + NAD(+) = 4-methyl-2-oxopentanoate + H(+) + NADH + NH(3) 1 LR 1 KEGG:R01088 KEGG reaction METACYC:LEUCINE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:12223 Rhea reaction 1 1 1 1 KEGG:R01090 METACYC:BRANCHED-CHAINAMINOTRANSFERLEU-RXN RHEA:18324 reaction UPa:UCR01090 2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamate 1 1 RL 1 LR 1 KEGG:R01090 KEGG reaction METACYC:BRANCHED-CHAINAMINOTRANSFERLEU-RXN Rhea MetaCyc REACTION RHEA:18324 Rhea reaction 1 1 1 1 1 1 KEGG:R01121 METACYC:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN RHEA:23735 reaction UPa:UCR01121 (R)-5-diphosphomevalonate + ATP = ADP + CO(2) + isopentenyl diphosphate + phosphate 1 LR 1 KEGG:R01121 KEGG reaction METACYC:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN Rhea MetaCyc REACTION RHEA:23735 Rhea reaction 1 1 KEGG:R01123 METACYC:IPPISOM-RXN RHEA:23287 reaction UPa:UCR01123 isopentenyl diphosphate = dimethylallyl diphosphate 1 LR 1 KEGG:R01123 KEGG reaction METACYC:IPPISOM-RXN Rhea MetaCyc REACTION RHEA:23287 Rhea reaction 1 1 1 KEGG:R01127 METACYC:IMPCYCLOHYDROLASE-RXN RHEA:18448 reaction UPa:UCR01127 H(2)O + IMP = 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide 1 RL 1 KEGG:R01127 KEGG reaction METACYC:IMPCYCLOHYDROLASE-RXN Rhea MetaCyc REACTION RHEA:18448 Rhea reaction 1 1 1 1 1 1 KEGG:R01130 METACYC:IMP-DEHYDROG-RXN RHEA:11711 reaction UPa:UCR01130 H(2)O + IMP + NAD(+) = H(+) + NADH + XMP 1 LR 1 KEGG:R01130 KEGG reaction METACYC:IMP-DEHYDROG-RXN Rhea MetaCyc REACTION RHEA:11711 Rhea reaction 1 1 1 1 KEGG:R01131 METACYC:INOSINEKIN-RXN RHEA:21143 reaction UPa:UCR01131 ATP + inosine = ADP + IMP 1 LR 1 KEGG:R01131 KEGG reaction METACYC:INOSINEKIN-RXN MetaCyc MetaCyc REACTION RHEA:21143 Rhea reaction 1 1 1 1 KEGG:R01132 METACYC:HYPOXANPRIBOSYLTRAN-RXN RHEA:17976 reaction UPa:UCR01132 IMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + hypoxanthine 1 RL 1 KEGG:R01132 KEGG reaction METACYC:HYPOXANPRIBOSYLTRAN-RXN Rhea MetaCyc REACTION RHEA:17976 Rhea reaction 1 1 1 1 1 1 KEGG:R01135 METACYC:ADENYLOSUCCINATE-SYNTHASE-RXN RHEA:15756 reaction UPa:UCR01135 GTP + IMP + L-aspartate = GDP + N(6)-(1,2-dicarboxyethyl)-AMP + phosphate 1 LR 1 KEGG:R01135 KEGG reaction METACYC:ADENYLOSUCCINATE-SYNTHASE-RXN Rhea MetaCyc REACTION RHEA:15756 Rhea reaction 1 1 1 1 1 1 KEGG:R01151 METACYC:PUTRESCINE-OXIDASE-RXN RHEA:18276 reaction UPa:UCR01151 H(2)O + O(2) + putrescine = 4-aminobutanal + H(2)O(2) + NH(3) 1 LR 1 KEGG:R01151 KEGG reaction METACYC:PUTRESCINE-OXIDASE-RXN MetaCyc MetaCyc REACTION RHEA:18276 Rhea reaction 1 1 1 1 1 KEGG:R01152 METACYC:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN RHEA:22287 reaction UPa:UCR01152 H(2)O + N-carbamoylputrescine = CO(2) + NH(3) + putrescine 1 LR 1 KEGG:R01152 KEGG reaction METACYC:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN MetaCyc MetaCyc REACTION RHEA:22287 Rhea reaction 1 1 1 1 KEGG:R01154 METACYC:RXN-0 RHEA:25184 reaction UPa:UCR01154 acetyl-CoA + putrescine = CoA + N-acetylputrescine 1 LR 1 KEGG:R01154 KEGG reaction METACYC:RXN-0 MetaCyc MetaCyc REACTION RHEA:25184 Rhea reaction 1 1 1 1 KEGG:R01155 METACYC:PUTTRANSAM-RXN RHEA:23819 reaction UPa:UCR01155 2-oxoglutarate + putrescine = 4-aminobutanal + L-glutamate 1 LR 1 KEGG:R01155 KEGG reaction METACYC:PUTTRANSAM-RXN Rhea MetaCyc REACTION RHEA:23819 Rhea reaction 1 1 1 1 KEGG:R01157 METACYC:AGMATIN-RXN RHEA:13932 reaction UPa:UCR01157 H(2)O + agmatine = putrescine + urea 1 LR 1 KEGG:R01157 KEGG reaction METACYC:AGMATIN-RXN Rhea MetaCyc REACTION RHEA:13932 Rhea reaction 1 1 1 1 1 1 KEGG:R01158 METACYC:RXN-8001 RHEA:20644 reaction UPa:UCR01158 H(2)O + L-histidinol + 2 NAD(+) = 2 H(+) + L-histidine + 2 NADH 1 LR 1 KEGG:R01158 KEGG reaction METACYC:RXN-8001 Rhea MetaCyc REACTION RHEA:20644 Rhea reaction 1 1 1 KEGG:R01167 METACYC:HISTIDINE-DECARBOXYLASE-RXN RHEA:20843 reaction UPa:UCR01167 L-histidine = CO(2) + histamine 1 LR 1 KEGG:R01167 KEGG reaction METACYC:HISTIDINE-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:20843 Rhea reaction 1 1 1 KEGG:R01168 METACYC:HISTIDINE-AMMONIA-LYASE-RXN RHEA:21235 reaction UPa:UCR01168 L-histidine = NH(3) + trans-urocanate 1 LR 1 KEGG:R01168 KEGG reaction METACYC:HISTIDINE-AMMONIA-LYASE-RXN MetaCyc MetaCyc REACTION RHEA:21235 Rhea reaction 1 1 1 1 1 KEGG:R01183 METACYC:MYO-INOSITOL-2-DEHYDROGENASE-RXN RHEA:16952 reaction UPa:UCR01183 NAD(+) + myo-inositol = H(+) + NADH + scyllo-inosose 1 LR 1 KEGG:R01183 KEGG reaction METACYC:MYO-INOSITOL-2-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:16952 Rhea reaction 1 1 1 1 KEGG:R01184 METACYC:MYO-INOSITOL-OXYGENASE-RXN RHEA:23699 reaction UPa:UCR01184 O(2) + myo-inositol = D-glucuronate + H(2)O 1 LR 1 KEGG:R01184 KEGG reaction METACYC:MYO-INOSITOL-OXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:23699 Rhea reaction 1 1 1 1 KEGG:R01187 METACYC:MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN RHEA:30742 reaction UPa:UCR01187 1D-myo-inositol 3-phosphate + H(2)O = myo-inositol + phosphate 1 LR 1 KEGG:R01187 KEGG reaction METACYC:MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN MetaCyc MetaCyc REACTION RHEA:30742 Rhea reaction 1 1 1 1 1 1 1 KEGG:R01197 METACYC:2-OXOGLUTARATE-SYNTHASE-RXN RHEA:17300 reaction UPa:UCR01197 CO(2) + 2 H(+) + 2 reduced ferredoxin + succinyl-CoA = 2-oxoglutarate + CoA + 2 oxidized ferredoxin 1 RL 1 KEGG:R01197 KEGG reaction METACYC:2-OXOGLUTARATE-SYNTHASE-RXN Rhea MetaCyc REACTION RHEA:17300 Rhea reaction 1 1 1 1 1 KEGG:R01213 METACYC:2-ISOPROPYLMALATESYN-RXN RHEA:21527 reaction UPa:UCR01213 (2S)-2-isopropylmalate + CoA = 3-methyl-2-oxobutanoate + H(2)O + acetyl-CoA 1 RL 1 KEGG:R01213 KEGG reaction METACYC:2-ISOPROPYLMALATESYN-RXN MetaCyc MetaCyc REACTION RHEA:21527 Rhea reaction 1 1 1 1 KEGG:R01214 METACYC:BRANCHED-CHAINAMINOTRANSFERVAL-RXN RHEA:24816 reaction UPa:UCR01214 2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoate + L-glutamate 1 RL 1 KEGG:R01214 KEGG reaction METACYC:BRANCHED-CHAINAMINOTRANSFERVAL-RXN Rhea MetaCyc REACTION RHEA:24816 Rhea reaction 1 1 1 1 1 KEGG:R01226 METACYC:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN RHEA:11827 reaction UPa:UCR01226 3-methyl-2-oxobutanoate + 5,10-methylene-THF + H(2)O = 2-dehydropantoate + 5,6,7,8-tetrahydrofolate 1 LR 1 KEGG:R01226 KEGG reaction METACYC:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN Rhea MetaCyc REACTION RHEA:11827 Rhea reaction 1 1 1 1 KEGG:R01229 METACYC:GUANPRIBOSYLTRAN-RXN RHEA:25427 reaction UPa:UCR01229 GMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + guanine 1 RL 1 KEGG:R01229 KEGG reaction METACYC:GUANPRIBOSYLTRAN-RXN Rhea MetaCyc REACTION RHEA:25427 Rhea reaction 1 1 1 1 1 1 KEGG:R01230 METACYC:GMP-SYN-NH3-RXN RHEA:18304 reaction UPa:UCR01230 ATP + NH(3) + XMP = AMP + GMP + diphosphate 1 LR 1 KEGG:R01230 KEGG reaction METACYC:GMP-SYN-NH3-RXN MetaCyc MetaCyc REACTION RHEA:18304 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R01231 METACYC:GMP-SYN-GLUT-RXN RHEA:11683 reaction UPa:UCR01231 ATP + H(2)O + L-glutamine + XMP = AMP + GMP + L-glutamate + diphosphate 1 LR 1 KEGG:R01231 KEGG reaction METACYC:GMP-SYN-GLUT-RXN MetaCyc MetaCyc REACTION RHEA:11683 Rhea reaction 1 1 1 KEGG:R01234 METACYC:35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN RHEA:16960 reaction UPa:UCR01234 3',5'-cyclic GMP + H(2)O = GMP 1 LR 1 KEGG:R01234 KEGG reaction METACYC:35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN MetaCyc MetaCyc REACTION RHEA:16960 Rhea reaction 1 1 1 1 1 KEGG:R01248 RHEA:14108 reaction UPa:UCR01248 L-proline + NAD(+) = (S)-1-pyrroline-5-carboxylic acid + H(+) + NADH 1 RL 2 KEGG:R01248 KEGG reaction RHEA:14108 Rhea reaction 1 1 1 1 KEGG:R01253 METACYC:RXN-14903 RHEA:23787 reaction UPa:UCR01253 L-proline + Quinone = (S)-1-pyrroline-5-carboxylic acid + Hydroquinone 1 LR 1 KEGG:R01253 KEGG reaction METACYC:RXN-14903 MetaCyc MetaCyc REACTION RHEA:23787 Rhea reaction 1 1 1 1 KEGG:R01268 METACYC:NICOTINAMID-RXN RHEA:14548 reaction UPa:UCR01268 H(2)O + nicotinamide = NH(3) + nicotinate 1 LR 1 KEGG:R01268 KEGG reaction METACYC:NICOTINAMID-RXN MetaCyc MetaCyc REACTION RHEA:14548 Rhea reaction 1 1 1 1 KEGG:R01271 METACYC:2.4.2.12-RXN RHEA:16152 reaction UPa:UCR01271 diphosphate + nicotinamide D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + nicotinamide 1 RL 1 KEGG:R01271 KEGG reaction METACYC:2.4.2.12-RXN MetaCyc MetaCyc REACTION RHEA:16152 Rhea reaction 1 1 1 1 1 KEGG:R01286 METACYC:CYSTATHIONINE-BETA-LYASE-RXN RHEA:13968 reaction UPa:UCR01286 H(2)O + L-cystathionine = L-homocysteine + NH(3) + pyruvate 1 LR 1 KEGG:R01286 KEGG reaction METACYC:CYSTATHIONINE-BETA-LYASE-RXN Rhea MetaCyc REACTION RHEA:13968 Rhea reaction 1 1 1 1 KEGG:R01287 METACYC:ACETYLHOMOSER-CYS-RXN RHEA:27825 reaction UPa:UCR01287 O-acetyl-L-homoserine + hydrogen sulfide = L-homocysteine + acetate 1 LR 1 KEGG:R01287 KEGG reaction METACYC:ACETYLHOMOSER-CYS-RXN Rhea MetaCyc REACTION RHEA:27825 Rhea reaction 1 1 1 1 KEGG:R01288 METACYC:RXN-9384 RHEA:27829 reaction UPa:UCR01288 O-succinyl-L-homoserine + hydrogen sulfide = L-homocysteine + succinate 1 LR 1 KEGG:R01288 KEGG reaction METACYC:RXN-9384 Rhea MetaCyc REACTION RHEA:27829 Rhea reaction 1 1 1 1 KEGG:R01290 METACYC:CYSTATHIONINE-BETA-SYNTHASE-RXN RHEA:10115 reaction UPa:UCR01290 L-homocysteine + L-serine = H(2)O + L-cystathionine 1 LR 1 KEGG:R01290 KEGG reaction METACYC:CYSTATHIONINE-BETA-SYNTHASE-RXN Rhea MetaCyc REACTION RHEA:10115 Rhea reaction 1 1 1 1 1 1 1 KEGG:R01295 METACYC:BENZOATE-4-MONOOXYGENASE-RXN RHEA:18036 reaction UPa:UCR01295 H(+) + NADPH + O(2) + benzoate = 4-hydroxybenzoate + H(2)O + NADP(+) 1 LR 1 KEGG:R01295 KEGG reaction METACYC:BENZOATE-4-MONOOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:18036 Rhea reaction 1 1 1 1 1 1 1 KEGG:R01298 METACYC:1.14.13.33-RXN METACYC:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN RHEA:19480 reaction UPa:UCR01298 4-hydroxybenzoate + H(+) + NADPH + O(2) = 3,4-dihydroxybenzoate + H(2)O + NADP(+) 1 LR 1 KEGG:R01298 KEGG reaction METACYC:1.14.13.33-RXN MetaCyc Rhea MetaCyc REACTION METACYC:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:19480 Rhea reaction 1 1 1 1 KEGG:R01301 METACYC:3.1.2.23-RXN RHEA:11951 reaction UPa:UCR01301 4-hydroxybenzoyl-CoA + H(2)O = 4-hydroxybenzoate + CoA 1 LR 1 KEGG:R01301 KEGG reaction METACYC:3.1.2.23-RXN MetaCyc MetaCyc REACTION RHEA:11951 Rhea reaction 1 1 1 1 KEGG:R01321 METACYC:RXN-5781 RHEA:10311 RHEA:32942 reaction UPa:UCR01321 1,2-diacyl-sn-glycerol + CDP-choline = CMP + phosphatidylcholine 1 LR 1 KEGG:R01321 KEGG reaction METACYC:RXN-5781 Rhea MetaCyc REACTION RHEA:10311 Rhea reaction RHEA:32942 Rhea reaction 1 1 1 KEGG:R01325 METACYC:ACONITATEDEHYDR-RXN RHEA:10231 reaction UPa:UCR01325 citrate = H(2)O + cis-aconitate 1 LR 1 KEGG:R01325 KEGG reaction METACYC:ACONITATEDEHYDR-RXN Rhea MetaCyc REACTION RHEA:10231 Rhea reaction 1 1 1 1 KEGG:R01334 METACYC:GPH-RXN RHEA:14372 reaction UPa:UCR01334 2-phosphoglycolate + H(2)O = glycolate + phosphate 1 1 LR 1 LR 1 KEGG:R01334 KEGG reaction METACYC:GPH-RXN MetaCyc MetaCyc REACTION RHEA:14372 Rhea reaction 1 1 1 1 KEGG:R01353 METACYC:PROPKIN-RXN RHEA:23151 reaction UPa:UCR01353 ATP + propanoate = ADP + propanoyl phosphate 1 RL 1 KEGG:R01353 KEGG reaction METACYC:PROPKIN-RXN Rhea MetaCyc REACTION RHEA:23151 Rhea reaction 1 1 1 KEGG:R01355 METACYC:23-DIMETHYLMALATE-LYASE-RXN RHEA:10475 reaction UPa:UCR01355 (2R,3S)-2,3-dimethylmalate = propanoate + pyruvate 1 LR 1 KEGG:R01355 KEGG reaction METACYC:23-DIMETHYLMALATE-LYASE-RXN MetaCyc MetaCyc REACTION RHEA:10475 Rhea reaction 1 1 1 KEGG:R01360 METACYC:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN RHEA:24407 reaction UPa:UCR01360 (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA 1 LR 1 KEGG:R01360 KEGG reaction METACYC:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN MetaCyc MetaCyc REACTION RHEA:24407 Rhea reaction 1 1 1 1 KEGG:R01364 METACYC:FUMARYLACETOACETASE-RXN RHEA:10247 reaction UPa:UCR01364 acetoacetate + fumarate = 4-fumarylacetoacetate + H(2)O 1 RL 1 KEGG:R01364 KEGG reaction METACYC:FUMARYLACETOACETASE-RXN MetaCyc MetaCyc REACTION RHEA:10247 Rhea reaction 1 1 1 1 KEGG:R01373 METACYC:PREPHENATEDEHYDRAT-RXN RHEA:21651 reaction UPa:UCR01373 prephenate = CO(2) + H(2)O + phenylpyruvate 1 LR 1 KEGG:R01373 KEGG reaction METACYC:PREPHENATEDEHYDRAT-RXN Rhea MetaCyc REACTION RHEA:21651 Rhea reaction 1 1 1 KEGG:R01384 METACYC:UDP-GLUCURONATE-DECARBOXYLASE-RXN RHEA:23919 reaction UPa:UCR01384 UDP-alpha-D-glucuronate = CO(2) + UDP-alpha-D-xylose 1 LR 1 KEGG:R01384 KEGG reaction METACYC:UDP-GLUCURONATE-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:23919 Rhea reaction 1 1 1 1 1 KEGG:R01388 METACYC:GLYCERATE-DEHYDROGENASE-RXN RHEA:17908 reaction UPa:UCR01388 D-glycerate + NAD(+) = 3-hydroxypyruvate + H(+) + NADH 1 1 RL 1 LR 1 KEGG:R01388 KEGG reaction METACYC:GLYCERATE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:17908 Rhea reaction 1 1 1 1 1 KEGG:R01392 METACYC:RXN0-300 RHEA:18660 reaction UPa:UCR01392 D-glycerate + NADP(+) = 3-hydroxypyruvate + H(+) + NADPH 1 LR 1 KEGG:R01392 KEGG reaction METACYC:RXN0-300 MetaCyc Rhea MetaCyc REACTION RHEA:18660 Rhea reaction 1 1 1 1 KEGG:R01397 METACYC:ASPCARBTRANS-RXN RHEA:20016 reaction UPa:UCR01397 L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + phosphate 1 LR 1 KEGG:R01397 KEGG reaction METACYC:ASPCARBTRANS-RXN Rhea MetaCyc REACTION RHEA:20016 Rhea reaction 1 1 1 1 KEGG:R01398 METACYC:ORNCARBAMTRANSFER-RXN RHEA:19516 reaction UPa:UCR01398 L-ornithine + carbamoyl phosphate = L-citrulline + phosphate 1 1 1 LR 1 LR 1 RL 1 KEGG:R01398 KEGG reaction METACYC:ORNCARBAMTRANSFER-RXN Rhea MetaCyc REACTION RHEA:19516 Rhea reaction 1 1 1 1 KEGG:R01399 METACYC:PUTRESCINE-CARBAMOYLTRANSFERASE-RXN RHEA:21939 reaction UPa:UCR01399 carbamoyl phosphate + putrescine = N-carbamoylputrescine + phosphate 1 RL 1 KEGG:R01399 KEGG reaction METACYC:PUTRESCINE-CARBAMOYLTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:21939 Rhea reaction 1 1 1 1 KEGG:R01401 METACYC:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN RHEA:13620 reaction UPa:UCR01401 H(2)O + S-methyl-5'-thioadenosine = 5-methylthio-alpha-D-ribose + adenine 1 LR 1 KEGG:R01401 KEGG reaction METACYC:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN MetaCyc MetaCyc REACTION RHEA:13620 Rhea reaction 1 1 1 1 KEGG:R01402 METACYC:5-METHYLTHIOADENOSINE-PHOSPHORYLASE-RXN RHEA:11855 reaction UPa:UCR01402 S-methyl-5'-thioadenosine + phosphate = S-methyl-5-thio-alpha-D-ribose 1-phosphate + adenine 1 LR 1 KEGG:R01402 KEGG reaction METACYC:5-METHYLTHIOADENOSINE-PHOSPHORYLASE-RXN Rhea MetaCyc REACTION RHEA:11855 Rhea reaction 1 1 1 1 KEGG:R01416 METACYC:AGMATINE-DEIMINASE-RXN RHEA:18040 reaction UPa:UCR01416 H(2)O + agmatine = N-carbamoylputrescine + NH(3) 1 LR 1 KEGG:R01416 KEGG reaction METACYC:AGMATINE-DEIMINASE-RXN MetaCyc MetaCyc REACTION RHEA:18040 Rhea reaction 1 1 1 1 1 1 KEGG:R01419 METACYC:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN RHEA:11843 reaction UPa:UCR01419 H(2)O + NAD(+) + benzaldehyde = H(+) + NADH + benzoate 1 LR 1 KEGG:R01419 KEGG reaction METACYC:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN Rhea MetaCyc REACTION RHEA:11843 Rhea reaction 1 1 1 1 1 1 KEGG:R01420 METACYC:BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN RHEA:21663 reaction UPa:UCR01420 H(2)O + NADP(+) + benzaldehyde = H(+) + NADPH + benzoate 1 LR 1 KEGG:R01420 KEGG reaction METACYC:BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN MetaCyc MetaCyc REACTION RHEA:21663 Rhea reaction 1 1 1 1 1 KEGG:R01465 METACYC:THREODEHYD-RXN RHEA:13164 reaction UPa:UCR01465 L-threonine + NAD(+) = H(+) + L-2-amino-3-oxobutanoic acid + NADH 1 LR 1 KEGG:R01465 KEGG reaction METACYC:THREODEHYD-RXN MetaCyc MetaCyc REACTION RHEA:13164 Rhea reaction 1 1 1 1 KEGG:R01466 METACYC:THRESYN-RXN RHEA:10843 reaction UPa:UCR01466 H(2)O + O-phospho-L-homoserine = L-threonine + phosphate 1 LR 1 KEGG:R01466 KEGG reaction METACYC:THRESYN-RXN MetaCyc MetaCyc REACTION RHEA:10843 Rhea reaction 1 1 1 1 KEGG:R01468 METACYC:ETHANOLAMINE-KINASE-RXN RHEA:13072 reaction UPa:UCR01468 ATP + ethanolamine = ADP + phosphoethanolamine 1 LR 1 KEGG:R01468 KEGG reaction METACYC:ETHANOLAMINE-KINASE-RXN MetaCyc MetaCyc REACTION RHEA:13072 Rhea reaction 1 1 KEGG:R01473 METACYC:UDP-ARABINOSE-4-EPIMERASE-RXN RHEA:11323 reaction UPa:UCR01473 UDP-L-arabinose = UDP-alpha-D-xylose 1 RL 1 KEGG:R01473 KEGG reaction METACYC:UDP-ARABINOSE-4-EPIMERASE-RXN Rhea MetaCyc REACTION RHEA:11323 Rhea reaction 1 1 1 1 1 KEGG:R01481 METACYC:GLUCURONATE-REDUCTASE-RXN RHEA:14912 reaction UPa:UCR01481 L-gulonate + NADP(+) = D-glucuronate + H(+) + NADPH 1 RL 1 KEGG:R01481 KEGG reaction METACYC:GLUCURONATE-REDUCTASE-RXN MetaCyc MetaCyc REACTION RHEA:14912 Rhea reaction 1 1 1 1 KEGG:R01512 METACYC:PHOSGLYPHOS-RXN RHEA:14804 reaction UPa:UCR01512 3-phospho-D-glycerate + ATP = 3-phospho-D-glyceroyl phosphate + ADP 1 RL 1 KEGG:R01512 KEGG reaction METACYC:PHOSGLYPHOS-RXN Rhea MetaCyc REACTION RHEA:14804 Rhea reaction 1 1 1 1 1 KEGG:R01513 METACYC:PGLYCDEHYDROG-RXN RHEA:12644 reaction UPa:UCR01513 3-phospho-D-glycerate + NAD(+) = 3-phosphohydroxypyruvate + H(+) + NADH 1 LR 1 KEGG:R01513 KEGG reaction METACYC:PGLYCDEHYDROG-RXN Rhea MetaCyc REACTION RHEA:12644 Rhea reaction 1 1 1 1 KEGG:R01514 METACYC:GLY3KIN-RXN RHEA:23519 reaction UPa:UCR01514 ATP + D-glycerate = 3-phospho-D-glycerate + ADP 1 1 LR 1 LR 1 KEGG:R01514 KEGG reaction METACYC:GLY3KIN-RXN MetaCyc MetaCyc REACTION RHEA:23519 Rhea reaction 1 1 KEGG:R01518 METACYC:3PGAREARR-RXN RHEA:15904 reaction UPa:UCR01518 2-phospho-D-glycerate = 3-phospho-D-glycerate 1 RL 1 KEGG:R01518 KEGG reaction METACYC:3PGAREARR-RXN Rhea MetaCyc REACTION RHEA:15904 Rhea reaction 1 1 1 KEGG:R01519 METACYC:GLUCONOLACT-RXN RHEA:10443 reaction UPa:UCR01519 D-glucono-1,5-lactone + H(2)O = D-gluconate 1 LR 1 KEGG:R01519 KEGG reaction METACYC:GLUCONOLACT-RXN MetaCyc MetaCyc REACTION RHEA:10443 Rhea reaction 1 1 1 1 1 1 KEGG:R01528 METACYC:RXN-9952 RHEA:10119 reaction UPa:UCR01528 6-phospho-D-gluconate + NADP(+) = CO(2) + D-ribulose 5-phosphate + H(+) + NADPH 1 LR 1 KEGG:R01528 KEGG reaction METACYC:RXN-9952 MetaCyc MetaCyc REACTION RHEA:10119 Rhea reaction 1 1 KEGG:R01529 METACYC:RIBULP3EPIM-RXN RHEA:13680 reaction UPa:UCR01529 D-ribulose 5-phosphate = D-xylulose 5-phosphate 1 LR 1 KEGG:R01529 KEGG reaction METACYC:RIBULP3EPIM-RXN Rhea MetaCyc REACTION RHEA:13680 Rhea reaction 1 1 KEGG:R01530 METACYC:DARAB5PISOM-RXN RHEA:23107 reaction UPa:UCR01530 D-arabinose 5-phosphate = D-ribulose 5-phosphate 1 RL 1 KEGG:R01530 KEGG reaction METACYC:DARAB5PISOM-RXN Rhea MetaCyc REACTION RHEA:23107 Rhea reaction 1 1 1 1 KEGG:R01541 METACYC:DEOXYGLUCONOKIN-RXN RHEA:14800 reaction UPa:UCR01541 2-dehydro-3-deoxy-D-gluconate + ATP = 2-dehydro-3-deoxy-6-phospho-D-gluconic acid + ADP 1 LR 1 KEGG:R01541 KEGG reaction METACYC:DEOXYGLUCONOKIN-RXN MetaCyc MetaCyc REACTION RHEA:14800 Rhea reaction 1 1 1 1 1 KEGG:R01542 METACYC:1.1.1.127-RXN RHEA:24235 reaction UPa:UCR01542 2-dehydro-3-deoxy-D-gluconate + NAD(+) = 3-deoxy-D-glycero-hexo-2,5-diulosonate + H(+) + NADH 1 RL 1 KEGG:R01542 KEGG reaction METACYC:1.1.1.127-RXN Rhea MetaCyc REACTION RHEA:24235 Rhea reaction 1 1 1 1 1 KEGG:R01563 METACYC:N-CARBAMOYLSARCOSINE-AMIDASE-RXN RHEA:20060 reaction UPa:UCR01563 H(2)O + N-carbamoylsarcosine = CO(2) + NH(3) + sarcosine 1 LR 1 KEGG:R01563 KEGG reaction METACYC:N-CARBAMOYLSARCOSINE-AMIDASE-RXN MetaCyc MetaCyc REACTION RHEA:20060 Rhea reaction 1 1 1 1 1 1 KEGG:R01565 METACYC:DIMETHYLGLYCINE-DEHYDROGENASE-RXN RHEA:22499 reaction UPa:UCR01565 H(2)O + N,N-dimethylglycine + electron-transferring flavoprotein = formaldehyde + reduced electron-transferring flavoprotein + sarcosine 1 LR 1 KEGG:R01565 KEGG reaction METACYC:DIMETHYLGLYCINE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:22499 Rhea reaction 1 1 1 1 KEGG:R01567 METACYC:THYKI-RXN RHEA:19132 reaction UPa:UCR01567 ATP + thymidine = ADP + dTMP 1 LR 1 KEGG:R01567 KEGG reaction METACYC:THYKI-RXN Rhea MetaCyc REACTION RHEA:19132 Rhea reaction 1 1 1 1 KEGG:R01570 METACYC:THYM-PHOSPH-RXN RHEA:16040 reaction UPa:UCR01570 phosphate + thymidine = 2-deoxy-alpha-D-ribose 1-phosphate + thymine 1 RL 1 KEGG:R01570 KEGG reaction METACYC:THYM-PHOSPH-RXN Rhea MetaCyc REACTION RHEA:16040 Rhea reaction 1 1 1 1 1 KEGG:R01574 METACYC:D-ARABINOSE-1-DEHYDROGENASE-RXN RHEA:20460 reaction UPa:UCR01574 D-arabinose + NAD(+) = D-arabinono-1,4-lactone + H(+) + NADH 1 LR 1 KEGG:R01574 KEGG reaction METACYC:D-ARABINOSE-1-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:20460 Rhea reaction 1 1 1 1 1 KEGG:R01575 METACYC:RXN-8776 RHEA:21895 reaction UPa:UCR01575 D-arabinose + NADP(+) = D-arabinono-1,4-lactone + H(+) + NADPH 1 LR 1 KEGG:R01575 KEGG reaction METACYC:RXN-8776 MetaCyc MetaCyc REACTION RHEA:21895 Rhea reaction 1 1 1 1 1 KEGG:R01614 METACYC:RXN-87 RHEA:11939 reaction UPa:UCR01614 4-coumaroyl-CoA + 3 malonyl-CoA = 3,4',5-trihydroxystilbene + 4 CO(2) + 4 CoA 1 LR 1 KEGG:R01614 KEGG reaction METACYC:RXN-87 MetaCyc MetaCyc REACTION RHEA:11939 Rhea reaction 1 1 1 1 1 1 KEGG:R01616 METACYC:4-COUMARATE--COA-LIGASE-RXN RHEA:19644 reaction UPa:UCR01616 ATP + CoA + trans-4-coumarate = 4-coumaroyl-CoA + AMP + diphosphate 1 LR 1 KEGG:R01616 KEGG reaction METACYC:4-COUMARATE--COA-LIGASE-RXN MetaCyc MetaCyc REACTION RHEA:19644 Rhea reaction 1 1 1 1 KEGG:R01620 METACYC:LYSINE-N-ACETYLTRANSFERASE-RXN RHEA:14420 reaction UPa:UCR01620 L-lysine + acetyl phosphate = N(6)-acetyl-L-lysine + phosphate 1 LR 1 KEGG:R01620 KEGG reaction METACYC:LYSINE-N-ACETYLTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:14420 Rhea reaction 1 1 1 KEGG:R01627 METACYC:DHSHIKIMATE-DEHYDRO-RXN RHEA:24851 reaction UPa:UCR01627 3-dehydroshikimate = 3,4-dihydroxybenzoate + H(2)O 1 LR 1 KEGG:R01627 KEGG reaction METACYC:DHSHIKIMATE-DEHYDRO-RXN MetaCyc MetaCyc REACTION RHEA:24851 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R01629 RHEA:30038 reaction UPa:UCR01629 3,4-dihydroxybenzoate + H(+) + NADH + O(2) = CO(2) + H(2)O + NAD(+) + benzene-1,2,4-triol 1 LR 1 KEGG:R01629 KEGG reaction RHEA:30038 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R01630 RHEA:30042 reaction UPa:UCR01630 3,4-dihydroxybenzoate + H(+) + NADPH + O(2) = CO(2) + H(2)O + NADP(+) + benzene-1,2,4-triol 1 LR 1 KEGG:R01630 KEGG reaction RHEA:30042 Rhea reaction 1 1 1 KEGG:R01631 METACYC:PROTOCATECHUATE-34-DIOXYGENASE-RXN RHEA:10087 reaction UPa:UCR01631 3,4-dihydroxybenzoate + O(2) = 3-carboxy-cis,cis-muconate 1 LR 1 KEGG:R01631 KEGG reaction METACYC:PROTOCATECHUATE-34-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:10087 Rhea reaction 1 1 1 KEGG:R01635 METACYC:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN RHEA:24187 reaction UPa:UCR01635 4,5-dihydroxyphthalate = 3,4-dihydroxybenzoate + CO(2) 1 LR 1 KEGG:R01635 KEGG reaction METACYC:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN Rhea MetaCyc REACTION RHEA:24187 Rhea reaction 1 1 1 1 KEGG:R01639 METACYC:XYLULOKIN-RXN RHEA:10967 reaction UPa:UCR01639 ATP + D-xylulose = ADP + D-xylulose 5-phosphate 1 LR 1 KEGG:R01639 KEGG reaction METACYC:XYLULOKIN-RXN MetaCyc MetaCyc REACTION RHEA:10967 Rhea reaction 1 1 1 1 KEGG:R01641 METACYC:1TRANSKETO-RXN RHEA:10511 reaction UPa:UCR01641 D-glyceraldehyde 3-phosphate + sedoheptulose 7-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate 1 RL 1 KEGG:R01641 KEGG reaction METACYC:1TRANSKETO-RXN Rhea MetaCyc REACTION RHEA:10511 Rhea reaction 1 1 1 KEGG:R01647 RHEA:25791 reaction UPa:UCR01647 pyruvate + succinate semialdehyde = 2,4-dihydroxyhept-2-enedioic acid 1 RL 1 KEGG:R01647 KEGG reaction RHEA:25791 Rhea reaction 1 1 1 1 KEGG:R01648 METACYC:GABATRANSAM-RXN RHEA:23355 reaction UPa:UCR01648 2-oxoglutarate + 4-aminobutanoate = L-glutamate + succinate semialdehyde 1 LR 1 KEGG:R01648 KEGG reaction METACYC:GABATRANSAM-RXN Rhea MetaCyc REACTION RHEA:23355 Rhea reaction 1 1 1 1 1 1 1 KEGG:R01651 METACYC:2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN RHEA:25180 reaction UPa:UCR01651 4-methyl-2-oxopentanoate + CoA + NAD(+) = 3-isovaleryl-CoA + CO(2) + H(+) + NADH 1 LR 1 KEGG:R01651 KEGG reaction METACYC:2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:25180 Rhea reaction 1 1 1 KEGG:R01652 METACYC:RXN-7800 RHEA:25081 reaction UPa:UCR01652 4-methyl-2-oxopentanoate + CO(2) = 3-carboxy-4-methyl-2-oxopentanoate 1 RL 2 KEGG:R01652 KEGG reaction METACYC:RXN-7800 MetaCyc MetaCyc REACTION RHEA:25081 Rhea reaction 1 1 1 1 KEGG:R01658 METACYC:GPPSYN-RXN RHEA:22411 reaction UPa:UCR01658 dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate 1 LR 1 KEGG:R01658 KEGG reaction METACYC:GPPSYN-RXN MetaCyc MetaCyc REACTION RHEA:22411 Rhea reaction 1 1 1 1 KEGG:R01676 METACYC:GUANINE-DEAMINASE-RXN RHEA:14668 reaction UPa:UCR01676 H(2)O + guanine = NH(3) + xanthine 1 LR 1 KEGG:R01676 KEGG reaction METACYC:GUANINE-DEAMINASE-RXN MetaCyc MetaCyc REACTION RHEA:14668 Rhea reaction 1 1 1 1 1 1 KEGG:R01681 METACYC:HYPOTAURINE-DEHYDROGENASE-RXN RHEA:17388 reaction UPa:UCR01681 H(2)O + NAD(+) + hypotaurine = H(+) + NADH + taurine 1 LR 1 KEGG:R01681 KEGG reaction METACYC:HYPOTAURINE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:17388 Rhea reaction 1 1 1 KEGG:R01682 METACYC:CYSTAUR-RXN RHEA:25224 reaction UPa:UCR01682 L-cysteate = CO(2) + taurine 1 LR 1 KEGG:R01682 KEGG reaction METACYC:CYSTAUR-RXN Rhea MetaCyc REACTION RHEA:25224 Rhea reaction 1 1 1 1 1 KEGG:R01707 METACYC:PYRIDOXAL-4-DEHYDROGENASE-RXN RHEA:21339 reaction UPa:UCR01707 NAD(+) + pyridoxal = 4-pyridoxolactone + H(+) + NADH 1 LR 1 KEGG:R01707 KEGG reaction METACYC:PYRIDOXAL-4-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:21339 Rhea reaction 1 1 1 1 1 KEGG:R01708 METACYC:PYRIDOXINE-4-DEHYDROGENASE-RXN RHEA:16132 reaction UPa:UCR01708 NADP(+) + pyridoxine = H(+) + NADPH + pyridoxal 1 LR 1 KEGG:R01708 KEGG reaction METACYC:PYRIDOXINE-4-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:16132 Rhea reaction 1 1 1 1 KEGG:R01711 METACYC:PYRIDOXINE-4-OXIDASE-RXN RHEA:15036 reaction UPa:UCR01711 O(2) + pyridoxine = H(2)O(2) + pyridoxal 1 LR 1 KEGG:R01711 KEGG reaction METACYC:PYRIDOXINE-4-OXIDASE-RXN MetaCyc MetaCyc REACTION RHEA:15036 Rhea reaction 1 1 1 1 KEGG:R01712 METACYC:2.6.1.30-RXN RHEA:12844 reaction UPa:UCR01712 pyridoxamine + pyruvate = L-alanine + pyridoxal 1 LR 1 KEGG:R01712 KEGG reaction METACYC:2.6.1.30-RXN Rhea MetaCyc REACTION RHEA:12844 Rhea reaction 1 1 1 KEGG:R01714 METACYC:CHORISMATE-SYNTHASE-RXN RHEA:21023 reaction UPa:UCR01714 5-O-(1-carboxyvinyl)-3-phosphoshikimate = chorismate + phosphate 1 LR 1 KEGG:R01714 KEGG reaction METACYC:CHORISMATE-SYNTHASE-RXN Rhea MetaCyc REACTION RHEA:21023 Rhea reaction 1 1 KEGG:R01715 METACYC:CHORISMATEMUT-RXN RHEA:13900 reaction UPa:UCR01715 chorismate = prephenate 1 LR 1 KEGG:R01715 KEGG reaction METACYC:CHORISMATEMUT-RXN Rhea MetaCyc REACTION RHEA:13900 Rhea reaction 1 1 KEGG:R01717 METACYC:ISOCHORSYN-RXN RHEA:18988 reaction UPa:UCR01717 chorismate = isochorismate 1 LR 1 KEGG:R01717 KEGG reaction METACYC:ISOCHORSYN-RXN Rhea MetaCyc REACTION RHEA:18988 Rhea reaction 1 1 1 1 1 1 KEGG:R01720 METACYC:RXN-7637 RHEA:12239 reaction UPa:UCR01720 H(2)O + NADP(+) + nicotinate = 6-hydroxynicotinate + H(+) + NADPH 1 LR 1 KEGG:R01720 KEGG reaction METACYC:RXN-7637 MetaCyc MetaCyc REACTION RHEA:12239 Rhea reaction 1 1 1 1 1 1 1 1 1 KEGG:R01724 METACYC:NICOTINATEPRIBOSYLTRANS-RXN RHEA:13396 RHEA:36166 reaction UPa:UCR01724 ADP + diphosphate + nicotinate D-ribonucleotide + phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + ATP + H(+) + H(2)O + nicotinate 1 RL 1 KEGG:R01724 KEGG reaction METACYC:NICOTINATEPRIBOSYLTRANS-RXN MetaCyc MetaCyc REACTION RHEA:13396 Rhea reaction RHEA:36166 Rhea reaction 1 1 1 1 1 1 KEGG:R01728 METACYC:PREPHENATEDEHYDROG-RXN RHEA:13872 reaction UPa:UCR01728 NAD(+) + prephenate = (4-hydroxyphenyl)pyruvate + CO(2) + H(+) + NADH 1 LR 1 KEGG:R01728 KEGG reaction METACYC:PREPHENATEDEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:13872 Rhea reaction 1 1 1 1 1 1 KEGG:R01730 METACYC:PREPHENATE-DEHYDROGENASE-NADP+-RXN RHEA:21643 reaction UPa:UCR01730 NADP(+) + prephenate = (4-hydroxyphenyl)pyruvate + CO(2) + H(+) + NADPH 1 LR 1 KEGG:R01730 KEGG reaction METACYC:PREPHENATE-DEHYDROGENASE-NADP+-RXN Rhea MetaCyc REACTION RHEA:21643 Rhea reaction 1 1 1 1 KEGG:R01731 METACYC:PREPHENATE-ASP-TRANSAMINE-RXN RHEA:20448 reaction UPa:UCR01731 L-arogenate + oxaloacetate = L-aspartate + prephenate 1 RL 1 KEGG:R01731 KEGG reaction METACYC:PREPHENATE-ASP-TRANSAMINE-RXN Rhea MetaCyc REACTION RHEA:20448 Rhea reaction 1 1 1 1 KEGG:R01736 METACYC:GLYOXII-RXN RHEA:25248 reaction UPa:UCR01736 (R)-S-lactoylglutathione + H(2)O = (R)-lactate + glutathione 1 LR 1 KEGG:R01736 KEGG reaction METACYC:GLYOXII-RXN Rhea MetaCyc REACTION RHEA:25248 Rhea reaction 1 1 1 1 1 KEGG:R01745 METACYC:RXN0-5289 RHEA:18848 reaction UPa:UCR01745 D-glycerate + NAD(+) = 2-hydroxy-3-oxopropanoate + H(+) + NADH 1 RL 1 KEGG:R01745 KEGG reaction METACYC:RXN0-5289 Rhea MetaCyc REACTION RHEA:18848 Rhea reaction 1 1 1 1 1 KEGG:R01747 METACYC:RXN0-5289 METACYC:TSA-REDUCT-RXN RHEA:18844 reaction UPa:UCR01747 D-glycerate + NADP(+) = 2-hydroxy-3-oxopropanoate + H(+) + NADPH 1 RL 1 KEGG:R01747 KEGG reaction METACYC:RXN0-5289 MetaCyc Rhea MetaCyc REACTION METACYC:TSA-REDUCT-RXN MetaCyc MetaCyc REACTION RHEA:18844 Rhea reaction 1 1 1 1 1 1 KEGG:R01749 METACYC:1.1.1.92-RXN RHEA:13156 reaction UPa:UCR01749 CO(2) + D-glycerate + NAD(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADH 1 RL 1 KEGG:R01749 KEGG reaction METACYC:1.1.1.92-RXN MetaCyc Rhea MetaCyc REACTION RHEA:13156 Rhea reaction 1 1 1 1 1 1 KEGG:R01750 METACYC:1.1.1.92-RXN RHEA:13160 reaction UPa:UCR01750 CO(2) + D-glycerate + NADP(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADPH 1 RL 1 KEGG:R01750 KEGG reaction METACYC:1.1.1.92-RXN Rhea MetaCyc REACTION RHEA:13160 Rhea reaction 1 1 1 KEGG:R01751 METACYC:TARTRATE-DECARBOXYLASE-RXN RHEA:13320 reaction UPa:UCR01751 L-tartrate = CO(2) + D-glycerate 1 LR 1 KEGG:R01751 KEGG reaction METACYC:TARTRATE-DECARBOXYLASE-RXN Rhea MetaCyc REACTION RHEA:13320 Rhea reaction 1 1 1 1 1 KEGG:R01757 METACYC:L-ARABINOSE-1-DEHYDROGENASE-RXN RHEA:17928 reaction UPa:UCR01757 L-arabinose + NAD(+) = H(+) + L-arabinono-1,4-lactone + NADH 1 LR 1 KEGG:R01757 KEGG reaction METACYC:L-ARABINOSE-1-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:17928 Rhea reaction 1 1 1 1 1 KEGG:R01758 METACYC:RXN-14102 RHEA:25228 reaction UPa:UCR01758 L-arabinitol + NAD(+) = H(+) + L-arabinose + NADH 1 RL 1 KEGG:R01758 KEGG reaction METACYC:RXN-14102 MetaCyc Rhea MetaCyc REACTION RHEA:25228 Rhea reaction 1 1 1 1 1 KEGG:R01759 METACYC:RXN-8772 RHEA:25232 reaction UPa:UCR01759 L-arabinitol + NADP(+) = H(+) + L-arabinose + NADPH 1 RL 1 KEGG:R01759 KEGG reaction METACYC:RXN-8772 Rhea MetaCyc REACTION RHEA:25232 Rhea reaction 1 1 KEGG:R01761 METACYC:ARABISOM-RXN RHEA:14824 reaction UPa:UCR01761 L-arabinose = L-ribulose 1 LR 1 KEGG:R01761 KEGG reaction METACYC:ARABISOM-RXN Rhea MetaCyc REACTION RHEA:14824 Rhea reaction 1 1 1 KEGG:R01764 METACYC:BENZOYLFORMATE-DECARBOXYLASE-RXN RHEA:23371 reaction UPa:UCR01764 phenylglyoxylate = CO(2) + benzaldehyde 1 LR 1 KEGG:R01764 KEGG reaction METACYC:BENZOYLFORMATE-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:23371 Rhea reaction 1 1 1 1 1 1 KEGG:R01768 METACYC:RXN-7682 RHEA:24673 reaction UPa:UCR01768 H(2)O + NAD(+) + hypoxanthine = H(+) + NADH + xanthine 1 LR 1 KEGG:R01768 KEGG reaction METACYC:RXN-7682 MetaCyc MetaCyc REACTION RHEA:24673 Rhea reaction 1 1 1 1 KEGG:R01771 METACYC:HOMOSERKIN-RXN RHEA:13988 reaction UPa:UCR01771 ATP + L-homoserine = ADP + O-phospho-L-homoserine 1 LR 1 KEGG:R01771 KEGG reaction METACYC:HOMOSERKIN-RXN Rhea MetaCyc REACTION RHEA:13988 Rhea reaction 1 1 1 1 1 KEGG:R01773 RHEA:15760 reaction UPa:UCR01773 L-homoserine + NAD(+) = H(+) + L-aspartate 4-semialdehyde + NADH 1 RL 1 KEGG:R01773 KEGG reaction RHEA:15760 Rhea reaction 1 1 1 1 1 KEGG:R01775 METACYC:HOMOSERDEHYDROG-RXN RHEA:15764 reaction UPa:UCR01775 L-homoserine + NADP(+) = H(+) + L-aspartate 4-semialdehyde + NADPH 1 RL 1 KEGG:R01775 KEGG reaction METACYC:HOMOSERDEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:15764 Rhea reaction 1 1 1 1 KEGG:R01776 METACYC:HOMOSERINE-O-ACETYLTRANSFERASE-RXN RHEA:13704 reaction UPa:UCR01776 L-homoserine + acetyl-CoA = CoA + O-acetyl-L-homoserine 1 LR 1 KEGG:R01776 KEGG reaction METACYC:HOMOSERINE-O-ACETYLTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:13704 Rhea reaction 1 1 1 1 KEGG:R01777 METACYC:HOMSUCTRAN-RXN RHEA:22011 reaction UPa:UCR01777 L-homoserine + succinyl-CoA = CoA + O-succinyl-L-homoserine 1 LR 1 KEGG:R01777 KEGG reaction METACYC:HOMSUCTRAN-RXN MetaCyc MetaCyc REACTION RHEA:22011 Rhea reaction 1 1 1 KEGG:R01784 METACYC:4.1.2.18-RXN RHEA:18548 reaction UPa:UCR01784 2-dehydro-3-deoxy-L-arabinonate = glycolaldehyde + pyruvate 1 LR 1 KEGG:R01784 KEGG reaction METACYC:4.1.2.18-RXN Rhea MetaCyc REACTION RHEA:18548 Rhea reaction 1 1 1 1 1 KEGG:R01793 METACYC:1.5.1.34-RXN METACYC:RXN-7909 RHEA:17872 RHEA:32254 reaction UPa:UCR01793 H(+) + NADH + dihydrobiopterin = NAD(+) + tetrahydrobiopterin 1 LR 1 KEGG:R01793 KEGG reaction METACYC:1.5.1.34-RXN MetaCyc Rhea MetaCyc REACTION METACYC:RXN-7909 Rhea MetaCyc REACTION RHEA:17872 Rhea reaction RHEA:32254 Rhea reaction 1 1 1 1 1 KEGG:R01794 RHEA:32250 reaction UPa:UCR01794 H(+) + NADPH + dihydrobiopterin = NADP(+) + tetrahydrobiopterin 1 LR 1 KEGG:R01794 KEGG reaction RHEA:32250 Rhea reaction 1 1 1 1 KEGG:R01797 METACYC:CDPDIGLYPYPHOSPHA-RXN RHEA:15224 reaction UPa:UCR01797 CDP-diacylglycerol + H(2)O = CMP + phosphatidate 1 LR 1 KEGG:R01797 KEGG reaction METACYC:CDPDIGLYPYPHOSPHA-RXN Rhea MetaCyc REACTION RHEA:15224 Rhea reaction 1 1 1 1 KEGG:R01799 METACYC:CDPDIGLYSYN-RXN RHEA:16232 reaction UPa:UCR01799 CTP + phosphatidate = CDP-diacylglycerol + diphosphate 1 LR 1 KEGG:R01799 KEGG reaction METACYC:CDPDIGLYSYN-RXN MetaCyc MetaCyc REACTION RHEA:16232 Rhea reaction 1 1 1 1 KEGG:R01800 METACYC:PHOSPHASERSYN-RXN RHEA:16916 reaction UPa:UCR01800 CDP-diacylglycerol + L-serine = CMP + phosphatidylserine 1 LR 1 KEGG:R01800 KEGG reaction METACYC:PHOSPHASERSYN-RXN Rhea MetaCyc REACTION RHEA:16916 Rhea reaction 1 1 1 1 KEGG:R01801 METACYC:PHOSPHAGLYPSYN-RXN RHEA:12596 reaction UPa:UCR01801 CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + phosphatidylglycerophosphate 1 LR 1 KEGG:R01801 KEGG reaction METACYC:PHOSPHAGLYPSYN-RXN Rhea MetaCyc REACTION RHEA:12596 Rhea reaction 1 1 1 KEGG:R01811 METACYC:ACNEULY-RXN RHEA:23299 reaction UPa:UCR01811 N-acetylneuraminate = N-acetyl-D-mannosamine + pyruvate 1 LR 1 KEGG:R01811 KEGG reaction METACYC:ACNEULY-RXN Rhea MetaCyc REACTION RHEA:23299 Rhea reaction 1 1 1 1 1 KEGG:R01812 METACYC:1.1.1.253-RXN RHEA:19512 reaction UPa:UCR01812 2 NADP(+) + tetrahydrobiopterin = 2 H(+) + 2 NADPH + biopterin 1 RL 1 KEGG:R01812 KEGG reaction METACYC:1.1.1.253-RXN Rhea MetaCyc REACTION RHEA:19512 Rhea reaction 1 1 1 1 1 KEGG:R01813 METACYC:RXN-8854 RHEA:42503 reaction UPa:UCR01813 NADP(+) + tetrahydrobiopterin = 6-lactoyl-5,6,7,8-tetrahydropterin + H(+) + NADPH 1 RL 1 KEGG:R01813 KEGG reaction METACYC:RXN-8854 MetaCyc MetaCyc REACTION RHEA:42503 Rhea reaction 1 1 KEGG:R01818 METACYC:PHOSMANMUT-RXN RHEA:11143 reaction UPa:UCR01818 D-mannose 6-phosphate = alpha-D-mannose 1-phosphate 1 LR 1 KEGG:R01818 KEGG reaction METACYC:PHOSMANMUT-RXN Rhea MetaCyc REACTION RHEA:11143 Rhea reaction 1 1 1 1 1 1 KEGG:R01825 METACYC:ERYTH4PDEHYDROG-RXN RHEA:12059 reaction UPa:UCR01825 D-erythrose 4-phosphate + H(2)O + NAD(+) = 4-phospho-D-erythronate + H(+) + NADH 1 LR 1 KEGG:R01825 KEGG reaction METACYC:ERYTH4PDEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:12059 Rhea reaction 1 1 1 1 1 KEGG:R01826 METACYC:DAHPSYN-RXN RHEA:14720 reaction UPa:UCR01826 D-erythrose 4-phosphate + H(2)O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate 1 LR 1 KEGG:R01826 KEGG reaction METACYC:DAHPSYN-RXN Rhea MetaCyc REACTION RHEA:14720 Rhea reaction 1 1 1 1 KEGG:R01827 METACYC:TRANSALDOL-RXN RHEA:17056 reaction UPa:UCR01827 D-glyceraldehyde 3-phosphate + sedoheptulose 7-phosphate = D-erythrose 4-phosphate + beta-D-fructose 6-phosphate 1 LR 1 KEGG:R01827 KEGG reaction METACYC:TRANSALDOL-RXN Rhea MetaCyc REACTION RHEA:17056 Rhea reaction 1 1 1 1 KEGG:R01830 METACYC:2TRANSKETO-RXN RHEA:27629 reaction UPa:UCR01830 D-glyceraldehyde 3-phosphate + beta-D-fructose 6-phosphate = D-erythrose 4-phosphate + D-xylulose 5-phosphate 1 RL 1 KEGG:R01830 KEGG reaction METACYC:2TRANSKETO-RXN MetaCyc Rhea MetaCyc REACTION RHEA:27629 Rhea reaction 1 1 1 1 1 1 KEGG:R01859 METACYC:PROPIONYL-COA-CARBOXY-RXN RHEA:23723 reaction UPa:UCR01859 ATP + bicarbonate + propanoyl-CoA = (S)-methylmalonyl-CoA + ADP + phosphate 1 LR 1 KEGG:R01859 KEGG reaction METACYC:PROPIONYL-COA-CARBOXY-RXN MetaCyc MetaCyc REACTION RHEA:23723 Rhea reaction 1 1 1 1 KEGG:R01867 METACYC:RXN-9929 RHEA:15444 reaction UPa:UCR01867 (S)-dihydroorotate + fumarate = orotate + succinate 1 LR 1 KEGG:R01867 KEGG reaction METACYC:RXN-9929 MetaCyc MetaCyc REACTION RHEA:15444 Rhea reaction 1 1 1 1 KEGG:R01868 METACYC:DIHYDROOROTATE-DEHYDROGENASE-RXN RHEA:18076 RHEA:30190 reaction UPa:UCR01868 (S)-dihydroorotate + Quinone = Hydroquinone + orotate 1 LR 1 KEGG:R01868 KEGG reaction METACYC:DIHYDROOROTATE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:18076 Rhea reaction RHEA:30190 Rhea reaction 1 1 1 1 1 KEGG:R01869 METACYC:OROTATE-REDUCTASE-NADH-RXN RHEA:13516 reaction UPa:UCR01869 (S)-dihydroorotate + NAD(+) = H(+) + NADH + orotate 1 LR 1 KEGG:R01869 KEGG reaction METACYC:OROTATE-REDUCTASE-NADH-RXN Rhea MetaCyc REACTION RHEA:13516 Rhea reaction 1 1 1 1 KEGG:R01870 METACYC:OROPRIBTRANS-RXN RHEA:10383 reaction UPa:UCR01870 diphosphate + orotidine 5'-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + orotate 1 RL 1 KEGG:R01870 KEGG reaction METACYC:OROPRIBTRANS-RXN Rhea MetaCyc REACTION RHEA:10383 Rhea reaction 1 1 1 1 1 KEGG:R01872 METACYC:QUINATE-5-DEHYDROGENASE-RXN METACYC:RXN-7967 RHEA:22367 reaction UPa:UCR01872 D-quinate + NAD(+) = 3-dehydroquinate + H(+) + NADH 1 LR 1 KEGG:R01872 KEGG reaction METACYC:QUINATE-5-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION METACYC:RXN-7967 MetaCyc Rhea MetaCyc REACTION RHEA:22367 Rhea reaction 1 1 1 1 KEGG:R01873 METACYC:1.1.99.25-RXN RHEA:23675 reaction UPa:UCR01873 D-quinate + pyrroloquinoline quinone = 3-dehydroquinate + pyrroloquinoline quinol 1 LR 1 KEGG:R01873 KEGG reaction METACYC:1.1.99.25-RXN MetaCyc MetaCyc REACTION RHEA:23675 Rhea reaction 1 1 1 1 KEGG:R01876 METACYC:URPHOS-RXN RHEA:24391 reaction UPa:UCR01876 phosphate + uridine = alpha-D-ribose 1-phosphate + uracil 1 LR 1 KEGG:R01876 KEGG reaction METACYC:URPHOS-RXN Rhea MetaCyc REACTION RHEA:24391 Rhea reaction 1 1 1 1 KEGG:R01878 METACYC:CYTIDEAM2-RXN RHEA:16072 reaction UPa:UCR01878 H(2)O + cytidine = NH(3) + uridine 1 LR 1 KEGG:R01878 KEGG reaction METACYC:CYTIDEAM2-RXN Rhea MetaCyc REACTION RHEA:16072 Rhea reaction 1 1 1 1 KEGG:R01883 METACYC:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN RHEA:10659 reaction UPa:UCR01883 S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine 1 LR 1 KEGG:R01883 KEGG reaction METACYC:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:10659 Rhea reaction 1 1 1 1 KEGG:R01890 METACYC:2.7.7.15-RXN RHEA:19000 reaction UPa:UCR01890 CTP + phosphocholine = CDP-choline + diphosphate 1 LR 1 KEGG:R01890 KEGG reaction METACYC:2.7.7.15-RXN MetaCyc MetaCyc REACTION RHEA:19000 Rhea reaction 1 1 1 1 1 KEGG:R01896 METACYC:D-XYLULOSE-REDUCTASE-RXN RHEA:20436 reaction UPa:UCR01896 NAD(+) + xylitol = D-xylulose + H(+) + NADH 1 LR 1 KEGG:R01896 KEGG reaction METACYC:D-XYLULOSE-REDUCTASE-RXN Rhea MetaCyc REACTION RHEA:20436 Rhea reaction 1 1 1 KEGG:R01900 METACYC:ACONITATEHYDR-RXN RHEA:22147 reaction UPa:UCR01900 isocitrate = H(2)O + cis-aconitate 1 RL 2 KEGG:R01900 KEGG reaction METACYC:ACONITATEHYDR-RXN Rhea MetaCyc REACTION RHEA:22147 Rhea reaction 1 1 1 1 1 KEGG:R01903 METACYC:L-ARABINITOL-4-DEHYDROGENASE-RXN RHEA:16384 reaction UPa:UCR01903 L-arabinitol + NAD(+) = H(+) + L-xylulose + NADH 1 LR 1 KEGG:R01903 KEGG reaction METACYC:L-ARABINITOL-4-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:16384 Rhea reaction 1 1 1 1 1 KEGG:R01904 METACYC:L-XYLULOSE-REDUCTASE-RXN RHEA:17028 reaction UPa:UCR01904 NADP(+) + xylitol = H(+) + L-xylulose + NADPH 1 RL 1 KEGG:R01904 KEGG reaction METACYC:L-XYLULOSE-REDUCTASE-RXN Rhea MetaCyc REACTION RHEA:17028 Rhea reaction 1 1 1 KEGG:R01908 METACYC:OXALYL-COA-DECARBOXYLASE-RXN RHEA:19336 reaction UPa:UCR01908 oxalyl-CoA = CO(2) + formyl-CoA 1 LR 1 KEGG:R01908 KEGG reaction METACYC:OXALYL-COA-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:19336 Rhea reaction 1 1 1 1 KEGG:R01909 METACYC:PNKIN-RXN RHEA:25111 reaction UPa:UCR01909 ATP + pyridoxine = ADP + pyridoxine 5'-phosphate 1 LR 1 KEGG:R01909 KEGG reaction METACYC:PNKIN-RXN MetaCyc MetaCyc REACTION RHEA:25111 Rhea reaction 1 1 1 1 KEGG:R01911 RHEA:25115 reaction UPa:UCR01911 phosphate + pyridoxine = H(2)O + pyridoxine 5'-phosphate 1 RL 1 KEGG:R01911 KEGG reaction RHEA:25115 Rhea reaction 1 1 1 1 1 1 KEGG:R01915 METACYC:SPERMIDINE-DEHYDROGENASE-RXN RHEA:14276 reaction UPa:UCR01915 H(2)O + acceptor + spermidine = 1,3-diaminopropane + 4-aminobutanal + reduced acceptor 1 LR 1 KEGG:R01915 KEGG reaction METACYC:SPERMIDINE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:14276 Rhea reaction 1 1 1 1 KEGG:R01920 METACYC:SPERMIDINESYN-RXN RHEA:12724 reaction UPa:UCR01920 S-adenosylmethioninamine + putrescine = S-methyl-5'-thioadenosine + spermidine 1 LR 1 KEGG:R01920 KEGG reaction METACYC:SPERMIDINESYN-RXN Rhea MetaCyc REACTION RHEA:12724 Rhea reaction 1 1 1 KEGG:R01936 reaction UPa:UCR01936 2-oxaloglutaric acid = 2-oxoadipate + CO(2) 1 LR 2 KEGG:R01936 KEGG reaction 1 1 1 1 KEGG:R01939 METACYC:2-AMINOADIPATE-AMINOTRANSFERASE-RXN RHEA:12604 reaction UPa:UCR01939 2-oxoglutarate + L-alpha-aminoadipate = 2-oxoadipate + L-glutamate 1 1 RL 1 LR 1 KEGG:R01939 KEGG reaction METACYC:2-AMINOADIPATE-AMINOTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:12604 Rhea reaction 1 1 1 1 KEGG:R01940 RHEA:12191 RHEA:15216 reaction UPa:UCR01940 2-oxoadipate + Enzyme N6-(lipoyl)lysine = CO(2) + S(8)-glutaryldihydrolipoamide 1 LR 1 KEGG:R01940 KEGG reaction RHEA:12191 Rhea reaction RHEA:15216 Rhea reaction 1 1 1 1 1 1 KEGG:R01954 METACYC:ARGSUCCINSYN-RXN RHEA:10935 reaction UPa:UCR01954 ATP + L-aspartate + L-citrulline = (N(omega)-L-arginino)succinate + AMP + diphosphate 1 1 LR 1 LR 1 KEGG:R01954 KEGG reaction METACYC:ARGSUCCINSYN-RXN Rhea MetaCyc REACTION RHEA:10935 Rhea reaction 1 1 1 1 KEGG:R01956 METACYC:2.6.1.7-RXN RHEA:20967 reaction UPa:UCR01956 2-oxoglutarate + L-kynurenine = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate 1 LR 1 KEGG:R01956 KEGG reaction METACYC:2.6.1.7-RXN MetaCyc MetaCyc REACTION RHEA:20967 Rhea reaction 1 1 1 1 KEGG:R01959 METACYC:ARYLFORMAMIDASE-RXN RHEA:13012 reaction UPa:UCR01959 H(2)O + N-formyl-N-kynurenine = L-kynurenine + formate 1 LR 1 KEGG:R01959 KEGG reaction METACYC:ARYLFORMAMIDASE-RXN MetaCyc MetaCyc REACTION RHEA:13012 Rhea reaction 1 1 1 1 1 1 1 KEGG:R01960 METACYC:KYNURENINE-3-MONOOXYGENASE-RXN RHEA:20548 reaction UPa:UCR01960 H(+) + L-kynurenine + NADPH + O(2) = 3-hydroxy-L-kynurenine + H(2)O + NADP(+) 1 LR 1 KEGG:R01960 KEGG reaction METACYC:KYNURENINE-3-MONOOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:20548 Rhea reaction 1 1 1 1 1 KEGG:R01978 METACYC:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN RHEA:10191 reaction UPa:UCR01978 (S)-3-hydroxy-3-methylglutaryl-CoA + CoA = H(2)O + acetoacetyl-CoA + acetyl-CoA 1 RL 1 KEGG:R01978 KEGG reaction METACYC:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN Rhea MetaCyc REACTION RHEA:10191 Rhea reaction 1 1 1 KEGG:R01993 METACYC:DIHYDROOROT-RXN RHEA:24299 reaction UPa:UCR01993 (S)-dihydroorotate + H(2)O = N-carbamoyl-L-aspartate 1 RL 1 KEGG:R01993 KEGG reaction METACYC:DIHYDROOROT-RXN Rhea MetaCyc REACTION RHEA:24299 Rhea reaction 1 1 1 1 KEGG:R02003 METACYC:FPPSYN-RXN RHEA:19364 reaction UPa:UCR02003 geranyl diphosphate + isopentenyl diphosphate = diphosphate + farnesyl diphosphate 1 LR 1 KEGG:R02003 KEGG reaction METACYC:FPPSYN-RXN Rhea MetaCyc REACTION RHEA:19364 Rhea reaction 1 1 1 KEGG:R02013 METACYC:4.2.3.16-RXN RHEA:12872 reaction UPa:UCR02013 geranyl diphosphate = (4S)-limonene + diphosphate 1 LR 1 KEGG:R02013 KEGG reaction METACYC:4.2.3.16-RXN MetaCyc MetaCyc REACTION RHEA:12872 Rhea reaction 1 1 1 1 1 KEGG:R02021 METACYC:1.8.4.8-RXN RHEA:11727 reaction UPa:UCR02021 3'-phospho-5'-adenylyl sulfate + thioredoxin = adenosine 3',5'-bisphosphate + sulfite + thioredoxin disulfide 1 LR 1 KEGG:R02021 KEGG reaction METACYC:1.8.4.8-RXN Rhea MetaCyc REACTION RHEA:11727 Rhea reaction 1 1 1 1 KEGG:R02029 METACYC:PGPPHOSPHA-RXN RHEA:33754 reaction UPa:UCR02029 H(2)O + phosphatidylglycerophosphate = phosphate + phosphatidylglycerol 1 LR 1 KEGG:R02029 KEGG reaction METACYC:PGPPHOSPHA-RXN Rhea MetaCyc REACTION RHEA:33754 Rhea reaction 1 1 1 KEGG:R02035 METACYC:6PGLUCONOLACT-RXN RHEA:12559 reaction UPa:UCR02035 D-glucono-1,5-lactone 6-phosphate + H(2)O = 6-phospho-D-gluconate 1 LR 1 KEGG:R02035 KEGG reaction METACYC:6PGLUCONOLACT-RXN MetaCyc MetaCyc REACTION RHEA:12559 Rhea reaction 1 1 1 1 KEGG:R02037 METACYC:2.1.1.103-RXN RHEA:20368 reaction UPa:UCR02037 S-adenosyl-L-methionine + phosphoethanolamine = N-methylethanolamine phosphate + S-adenosyl-L-homocysteine 1 LR 1 KEGG:R02037 KEGG reaction METACYC:2.1.1.103-RXN MetaCyc MetaCyc REACTION RHEA:20368 Rhea reaction 1 1 1 1 KEGG:R02038 METACYC:2.7.7.14-RXN RHEA:24595 reaction UPa:UCR02038 CTP + phosphoethanolamine = CDP-ethanolamine + diphosphate 1 LR 1 KEGG:R02038 KEGG reaction METACYC:2.7.7.14-RXN MetaCyc MetaCyc REACTION RHEA:24595 Rhea reaction 1 1 1 KEGG:R02055 METACYC:PHOSPHASERDECARB-RXN RHEA:20831 reaction UPa:UCR02055 phosphatidylserine = CO(2) + phosphatidylethanolamine 1 LR 1 KEGG:R02055 KEGG reaction METACYC:PHOSPHASERDECARB-RXN MetaCyc MetaCyc REACTION RHEA:20831 Rhea reaction 1 1 1 1 KEGG:R02057 METACYC:ETHANOLAMINEPHOSPHOTRANSFERASE-RXN RHEA:32946 reaction UPa:UCR02057 1,2-diacyl-sn-glycerol + CDP-ethanolamine = CMP + phosphatidylethanolamine 1 LR 1 KEGG:R02057 KEGG reaction METACYC:ETHANOLAMINEPHOSPHOTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:32946 Rhea reaction 1 1 1 1 KEGG:R02058 METACYC:GLUCOSAMINEPNACETYLTRANS-RXN RHEA:10295 reaction UPa:UCR02058 acetyl-CoA + alpha-D-glucosamine 6-phosphate = CoA + N-acetyl-D-glucosamine 6-phosphate 1 LR 1 KEGG:R02058 KEGG reaction METACYC:GLUCOSAMINEPNACETYLTRANS-RXN MetaCyc MetaCyc REACTION RHEA:10295 Rhea reaction 1 1 1 1 KEGG:R02059 METACYC:NAG6PDEACET-RXN RHEA:22939 reaction UPa:UCR02059 H(2)O + N-acetyl-D-glucosamine 6-phosphate = acetate + alpha-D-glucosamine 6-phosphate 1 LR 1 KEGG:R02059 KEGG reaction METACYC:NAG6PDEACET-RXN MetaCyc MetaCyc REACTION RHEA:22939 Rhea reaction 1 1 KEGG:R02060 METACYC:5.4.2.10-RXN RHEA:23427 reaction UPa:UCR02060 alpha-D-glucosamine 1-phosphate = alpha-D-glucosamine 6-phosphate 1 RL 1 KEGG:R02060 KEGG reaction METACYC:5.4.2.10-RXN Rhea MetaCyc REACTION RHEA:23427 Rhea reaction 1 1 1 1 KEGG:R02061 METACYC:FARNESYLTRANSTRANSFERASE-RXN RHEA:17656 reaction UPa:UCR02061 farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate 1 LR 1 KEGG:R02061 KEGG reaction METACYC:FARNESYLTRANSTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:17656 Rhea reaction 1 1 1 KEGG:R02065 METACYC:2.5.1.32-RXN RHEA:22299 reaction UPa:UCR02065 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate 1 LR 1 KEGG:R02065 KEGG reaction METACYC:2.5.1.32-RXN MetaCyc MetaCyc REACTION RHEA:22299 Rhea reaction 1 1 1 KEGG:R02080 METACYC:RXN66-221 RHEA:12275 reaction UPa:UCR02080 L-dopa = CO(2) + dopamine 1 LR 1 KEGG:R02080 KEGG reaction METACYC:RXN66-221 MetaCyc MetaCyc REACTION RHEA:12275 Rhea reaction 1 1 1 1 1 1 KEGG:R02081 METACYC:HYDROXYMETHYLGLUTARYL-COA-REDUCTASE-RXN RHEA:14836 reaction UPa:UCR02081 (R)-mevalonate + CoA + 2 NAD(+) = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 H(+) + 2 NADH 1 LR 1 KEGG:R02081 KEGG reaction METACYC:HYDROXYMETHYLGLUTARYL-COA-REDUCTASE-RXN MetaCyc MetaCyc REACTION RHEA:14836 Rhea reaction 1 1 1 1 1 1 KEGG:R02082 METACYC:1.1.1.34-RXN RHEA:15992 reaction UPa:UCR02082 (R)-mevalonate + CoA + 2 NADP(+) = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 H(+) + 2 NADPH 1 RL 1 KEGG:R02082 KEGG reaction METACYC:1.1.1.34-RXN Rhea MetaCyc REACTION RHEA:15992 Rhea reaction 1 1 1 KEGG:R02085 METACYC:METHYLGLUTACONYL-COA-HYDRATASE-RXN RHEA:21539 reaction UPa:UCR02085 (S)-3-hydroxy-3-methylglutaryl-CoA = 3-methylglutaconyl-CoA + H(2)O 1 RL 1 KEGG:R02085 KEGG reaction METACYC:METHYLGLUTACONYL-COA-HYDRATASE-RXN Rhea MetaCyc REACTION RHEA:21539 Rhea reaction 1 1 KEGG:R02087 METACYC:NANE-RXN RHEA:25260 reaction UPa:UCR02087 N-acetyl-D-glucosamine 6-phosphate = N-acetyl-D-mannosamine 6-phosphate 1 RL 1 KEGG:R02087 KEGG reaction METACYC:NANE-RXN MetaCyc MetaCyc REACTION RHEA:25260 Rhea reaction 1 1 1 1 KEGG:R02100 METACYC:DUTP-PYROP-RXN RHEA:10251 reaction UPa:UCR02100 H(2)O + dUTP = dUMP + diphosphate 1 LR 1 KEGG:R02100 KEGG reaction METACYC:DUTP-PYROP-RXN MetaCyc MetaCyc REACTION RHEA:10251 Rhea reaction 1 1 1 1 1 1 KEGG:R02103 METACYC:RXN0-901 RHEA:16672 reaction UPa:UCR02103 H(2)O + NAD(+) + xanthine = H(+) + NADH + urate 1 LR 1 KEGG:R02103 KEGG reaction METACYC:RXN0-901 Rhea MetaCyc REACTION RHEA:16672 Rhea reaction 1 1 1 1 1 KEGG:R02106 METACYC:URATE-OXIDASE-RXN RHEA:21371 reaction UPa:UCR02106 H(2)O + O(2) + urate = 5-hydroxyisouric acid + H(2)O(2) 1 LR 1 KEGG:R02106 KEGG reaction METACYC:URATE-OXIDASE-RXN MetaCyc MetaCyc REACTION RHEA:21371 Rhea reaction 1 1 1 1 1 KEGG:R02133 METACYC:THIAMINASE-RXN RHEA:17512 reaction UPa:UCR02133 H(2)O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H(+) 1 LR 1 KEGG:R02133 KEGG reaction METACYC:THIAMINASE-RXN MetaCyc MetaCyc REACTION RHEA:17512 Rhea reaction 1 1 1 1 KEGG:R02134 METACYC:THIKIN-RXN RHEA:12015 reaction UPa:UCR02134 ATP + thiamine = ADP + thiamine phosphate 1 LR 1 KEGG:R02134 KEGG reaction METACYC:THIKIN-RXN MetaCyc MetaCyc REACTION RHEA:12015 Rhea reaction 1 1 1 KEGG:R02139 METACYC:BARBITURASE-RXN RHEA:18656 reaction UPa:UCR02139 H(2)O + barbiturate = 3-oxo-3-ureidopropanoic acid 1 LR 1 KEGG:R02139 KEGG reaction METACYC:BARBITURASE-RXN MetaCyc MetaCyc REACTION RHEA:18656 Rhea reaction 1 1 1 1 KEGG:R02142 METACYC:XANPRIBOSYLTRAN-RXN RHEA:10803 reaction UPa:UCR02142 XMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine 1 RL 1 KEGG:R02142 KEGG reaction METACYC:XANPRIBOSYLTRAN-RXN MetaCyc MetaCyc REACTION RHEA:10803 Rhea reaction 1 1 1 1 KEGG:R02164 METACYC:SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN RHEA:13716 RHEA:40526 reaction UPa:UCR02164 Quinone + succinate = Hydroquinone + fumarate 1 LR 1 KEGG:R02164 KEGG reaction METACYC:SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN MetaCyc MetaCyc REACTION RHEA:13716 Rhea reaction RHEA:40526 Rhea reaction 1 1 1 1 KEGG:R02199 METACYC:BRANCHED-CHAINAMINOTRANSFERILEU-RXN RHEA:24804 reaction UPa:UCR02199 2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoate + L-glutamate 1 RL 1 KEGG:R02199 KEGG reaction METACYC:BRANCHED-CHAINAMINOTRANSFERILEU-RXN Rhea MetaCyc REACTION RHEA:24804 Rhea reaction 1 1 1 1 1 KEGG:R02236 RHEA:31106 reaction UPa:UCR02236 7,8-dihydrofolate + NADP(+) = H(+) + NADPH + folate 1 RL 1 KEGG:R02236 KEGG reaction RHEA:31106 Rhea reaction 1 1 1 1 1 1 KEGG:R02237 METACYC:DIHYDROFOLATESYNTH-RXN RHEA:23587 reaction UPa:UCR02237 7,8-dihydropteroate + ATP + L-glutamate = 7,8-dihydrofolate + ADP + phosphate 1 LR 1 KEGG:R02237 KEGG reaction METACYC:DIHYDROFOLATESYNTH-RXN MetaCyc MetaCyc REACTION RHEA:23587 Rhea reaction 1 1 1 1 KEGG:R02241 METACYC:RXN-1623 RHEA:19712 reaction UPa:UCR02241 CoA + phosphatidate = 1-acyl-sn-glycerol 3-phosphate + acyl-CoA 1 RL 1 KEGG:R02241 KEGG reaction METACYC:RXN-1623 MetaCyc MetaCyc REACTION RHEA:19712 Rhea reaction 1 1 1 1 KEGG:R02245 METACYC:MEVALONATE-KINASE-RXN RHEA:17068 reaction UPa:UCR02245 (R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP 1 LR 1 KEGG:R02245 KEGG reaction METACYC:MEVALONATE-KINASE-RXN Rhea MetaCyc REACTION RHEA:17068 Rhea reaction 1 1 1 1 1 1 1 KEGG:R02253 METACYC:TRANS-CINNAMATE-4-MONOOXYGENASE-RXN RHEA:10611 reaction UPa:UCR02253 H(+) + NADPH + O(2) + trans-cinnamate = H(2)O + NADP(+) + trans-4-coumarate 1 LR 1 KEGG:R02253 KEGG reaction METACYC:TRANS-CINNAMATE-4-MONOOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:10611 Rhea reaction 1 1 1 KEGG:R02262 METACYC:FUCPALDOL-RXN RHEA:12936 reaction UPa:UCR02262 L-fuculose 1-phosphate = L-lactaldehyde + glycerone phosphate 1 LR 1 KEGG:R02262 KEGG reaction METACYC:FUCPALDOL-RXN Rhea MetaCyc REACTION RHEA:12936 Rhea reaction 1 1 1 KEGG:R02263 METACYC:RHAMNULPALDOL-RXN RHEA:19692 reaction UPa:UCR02263 L-rhamnulose 1-phosphate = L-lactaldehyde + glycerone phosphate 1 LR 1 KEGG:R02263 KEGG reaction METACYC:RHAMNULPALDOL-RXN Rhea MetaCyc REACTION RHEA:19692 Rhea reaction 1 1 KEGG:R02272 METACYC:GSAAMINOTRANS-RXN RHEA:14268 reaction UPa:UCR02272 5-aminolevulinate = (S)-4-amino-5-oxopentanoic acid 1 RL 1 KEGG:R02272 KEGG reaction METACYC:GSAAMINOTRANS-RXN Rhea MetaCyc REACTION RHEA:14268 Rhea reaction 1 1 1 1 KEGG:R02274 METACYC:VAGL-RXN RHEA:10215 reaction UPa:UCR02274 2-oxoglutarate + 5-aminopentanoate = 5-oxopentanoate + L-glutamate 1 LR 1 KEGG:R02274 KEGG reaction METACYC:VAGL-RXN Rhea MetaCyc REACTION RHEA:10215 Rhea reaction 1 1 1 1 KEGG:R02276 METACYC:AMVAL-RXN RHEA:42515 reaction UPa:UCR02276 5-acetamidopentanoate + H(2)O = 5-aminopentanoate + acetate 1 LR 1 KEGG:R02276 KEGG reaction METACYC:AMVAL-RXN MetaCyc MetaCyc REACTION RHEA:42515 Rhea reaction 1 1 1 KEGG:R02278 METACYC:4.2.1.43-RXN RHEA:17204 reaction UPa:UCR02278 2-dehydro-3-deoxy-L-arabinonate = 2,5-dioxopentanoate + H(2)O 1 LR 1 KEGG:R02278 KEGG reaction METACYC:4.2.1.43-RXN MetaCyc MetaCyc REACTION RHEA:17204 Rhea reaction 1 1 1 1 KEGG:R02279 METACYC:4.2.1.41-RXN RHEA:24611 reaction UPa:UCR02279 5-dehydro-4-deoxy-D-glucarate = 2,5-dioxopentanoate + CO(2) + H(2)O 1 LR 1 KEGG:R02279 KEGG reaction METACYC:4.2.1.41-RXN MetaCyc MetaCyc REACTION RHEA:24611 Rhea reaction 1 1 1 1 KEGG:R02282 METACYC:GLUTAMATE-N-ACETYLTRANSFERASE-RXN RHEA:15352 reaction UPa:UCR02282 L-glutamate + N(2)-acetyl-L-ornithine = L-ornithine + N-acetyl-L-glutamate 1 LR 1 KEGG:R02282 KEGG reaction METACYC:GLUTAMATE-N-ACETYLTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:15352 Rhea reaction 1 1 1 1 KEGG:R02283 METACYC:ACETYLORNTRANSAM-RXN RHEA:18052 reaction UPa:UCR02283 2-oxoglutarate + N(2)-acetyl-L-ornithine = L-glutamate + N-acetyl-L-glutamate 5-semialdehyde 1 RL 1 KEGG:R02283 KEGG reaction METACYC:ACETYLORNTRANSAM-RXN Rhea MetaCyc REACTION RHEA:18052 Rhea reaction 1 1 1 1 KEGG:R02285 METACYC:FORMIMINOGLUTAMASE-RXN RHEA:22495 reaction UPa:UCR02285 H(2)O + N-formimidoyl-L-glutamate = L-glutamate + formamide 1 LR 1 KEGG:R02285 KEGG reaction METACYC:FORMIMINOGLUTAMASE-RXN MetaCyc MetaCyc REACTION RHEA:22495 Rhea reaction 1 1 1 1 KEGG:R02286 METACYC:FORMIMINOGLUTAMATE-DEIMINASE-RXN RHEA:22835 reaction UPa:UCR02286 H(2)O + N-formimidoyl-L-glutamate = N-formyl-L-glutamate + NH(3) 1 LR 1 KEGG:R02286 KEGG reaction METACYC:FORMIMINOGLUTAMATE-DEIMINASE-RXN MetaCyc MetaCyc REACTION RHEA:22835 Rhea reaction 1 1 1 1 KEGG:R02287 METACYC:GLUTAMATE-FORMIMINOTRANSFERASE-RXN RHEA:15100 reaction UPa:UCR02287 5-formiminotetrahydrofolate + L-glutamate = 5,6,7,8-tetrahydrofolate + N-formimidoyl-L-glutamate 1 RL 1 KEGG:R02287 KEGG reaction METACYC:GLUTAMATE-FORMIMINOTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:15100 Rhea reaction 1 1 1 KEGG:R02288 METACYC:IMIDAZOLONEPROPIONASE-RXN RHEA:23663 reaction UPa:UCR02288 4-imidazolone-5-propanoate + H(2)O = N-formimidoyl-L-glutamate 1 LR 1 KEGG:R02288 KEGG reaction METACYC:IMIDAZOLONEPROPIONASE-RXN MetaCyc MetaCyc REACTION RHEA:23663 Rhea reaction 1 1 1 1 1 1 KEGG:R02291 METACYC:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN RHEA:24287 reaction UPa:UCR02291 L-aspartate 4-semialdehyde + NADP(+) + phosphate = 4-phospho-L-aspartate + H(+) + NADPH 1 1 1 RL 1 RL 1 RL 1 KEGG:R02291 KEGG reaction METACYC:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:24287 Rhea reaction 1 1 1 KEGG:R02305 METACYC:PENTALENENE-SYNTHASE-RXN RHEA:18084 reaction UPa:UCR02305 farnesyl diphosphate = diphosphate + pentalenene 1 LR 1 KEGG:R02305 KEGG reaction METACYC:PENTALENENE-SYNTHASE-RXN MetaCyc MetaCyc REACTION RHEA:18084 Rhea reaction 1 1 1 KEGG:R02307 METACYC:ARISTOLOCHENE-SYNTHASE-RXN RHEA:19828 reaction UPa:UCR02307 farnesyl diphosphate = aristolochene + diphosphate 1 LR 1 KEGG:R02307 KEGG reaction METACYC:ARISTOLOCHENE-SYNTHASE-RXN MetaCyc MetaCyc REACTION RHEA:19828 Rhea reaction 1 1 1 1 1 1 1 KEGG:R02313 METACYC:1.5.1.9-RXN RHEA:24523 reaction UPa:UCR02313 H(2)O + NAD(+) + saccharopine = H(+) + L-2-aminoadipate 6-semialdahyde + L-glutamate + NADH 1 LR 1 KEGG:R02313 KEGG reaction METACYC:1.5.1.9-RXN MetaCyc MetaCyc REACTION RHEA:24523 Rhea reaction 1 1 1 1 1 1 1 KEGG:R02315 METACYC:RXN3O-127 RHEA:10023 reaction UPa:UCR02315 H(2)O + NADP(+) + saccharopine = H(+) + L-2-aminoadipate 6-semialdahyde + L-glutamate + NADPH 1 RL 1 KEGG:R02315 KEGG reaction METACYC:RXN3O-127 MetaCyc MetaCyc REACTION RHEA:10023 Rhea reaction 1 1 1 1 KEGG:R02325 METACYC:DCTP-DEAM-RXN RHEA:22683 reaction UPa:UCR02325 H(2)O + dCTP = NH(3) + dUTP 1 LR 1 KEGG:R02325 KEGG reaction METACYC:DCTP-DEAM-RXN MetaCyc MetaCyc REACTION RHEA:22683 Rhea reaction 1 1 1 KEGG:R02340 METACYC:RXN0-2381 RHEA:14084 reaction UPa:UCR02340 indoleglycerol phosphate = D-glyceraldehyde 3-phosphate + indole 1 1 LR 1 LR 1 KEGG:R02340 KEGG reaction METACYC:RXN0-2381 Rhea MetaCyc REACTION RHEA:14084 Rhea reaction 1 1 1 1 KEGG:R02362 METACYC:PECTINESTERASE-RXN reaction UPa:UCR02362 n H(2)O + pectin = n methanol + pectate 1 LR 1 KEGG:R02362 KEGG reaction METACYC:PECTINESTERASE-RXN MetaCyc MetaCyc REACTION 1 1 1 1 1 1 KEGG:R02401 METACYC:GLUTARATE-SEMIALDEHYDE-DEHYDROGENASE-RXN RHEA:12067 reaction UPa:UCR02401 5-oxopentanoate + H(2)O + NAD(+) = H(+) + NADH + glutarate 1 LR 1 KEGG:R02401 KEGG reaction METACYC:GLUTARATE-SEMIALDEHYDE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:12067 Rhea reaction 1 1 1 1 KEGG:R02412 METACYC:SHIKIMATE-KINASE-RXN RHEA:13124 reaction UPa:UCR02412 ATP + shikimate = 3-phosphoshikimate + ADP 1 LR 1 KEGG:R02412 KEGG reaction METACYC:SHIKIMATE-KINASE-RXN Rhea MetaCyc REACTION RHEA:13124 Rhea reaction 1 1 1 1 1 KEGG:R02413 METACYC:SHIKIMATE-5-DEHYDROGENASE-RXN RHEA:17740 reaction UPa:UCR02413 NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH 1 RL 1 KEGG:R02413 KEGG reaction METACYC:SHIKIMATE-5-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:17740 Rhea reaction 1 1 1 1 KEGG:R02422 METACYC:ALLANTOICASE-RXN RHEA:11019 reaction UPa:UCR02422 H(2)O + allantoate = (S)-ureidoglycolate + urea 1 LR 1 KEGG:R02422 KEGG reaction METACYC:ALLANTOICASE-RXN MetaCyc MetaCyc REACTION RHEA:11019 Rhea reaction 1 1 1 1 1 KEGG:R02423 METACYC:ALLANTOATE-DEIMINASE-RXN RHEA:13596 RHEA:27488 reaction UPa:UCR02423 H(2)O + allantoate = 2-ureidoglycine + CO(2) + NH(3) 1 LR 1 KEGG:R02423 KEGG reaction METACYC:ALLANTOATE-DEIMINASE-RXN MetaCyc MetaCyc REACTION RHEA:13596 Rhea reaction RHEA:27488 Rhea reaction 1 1 1 KEGG:R02425 METACYC:ALLANTOINASE-RXN RHEA:17032 reaction UPa:UCR02425 (S)-allantoin + H(2)O = allantoate 1 LR 1 KEGG:R02425 KEGG reaction METACYC:ALLANTOINASE-RXN MetaCyc MetaCyc REACTION RHEA:17032 Rhea reaction 1 1 1 KEGG:R02426 METACYC:CDP-GLUCOSE-46-DEHYDRATASE-RXN RHEA:17156 reaction UPa:UCR02426 CDP-glucose = CDP-4-dehydro-6-deoxy-D-glucose + H(2)O 1 LR 1 KEGG:R02426 KEGG reaction METACYC:CDP-GLUCOSE-46-DEHYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:17156 Rhea reaction 1 1 KEGG:R02437 METACYC:RHAMNISOM-RXN RHEA:23163 reaction UPa:UCR02437 L-rhamnose = L-rhamnulose 1 LR 1 KEGG:R02437 KEGG reaction METACYC:RHAMNISOM-RXN Rhea MetaCyc REACTION RHEA:23163 Rhea reaction 1 1 1 1 KEGG:R02439 METACYC:RXN0-5116 RHEA:22075 reaction UPa:UCR02439 ATP + L-ribulose = ADP + L-ribulose 5-phosphate 1 LR 1 KEGG:R02439 KEGG reaction METACYC:RXN0-5116 MetaCyc MetaCyc REACTION RHEA:22075 Rhea reaction 1 1 1 KEGG:R02466 METACYC:SULFINOALANINE-DECARBOXYLASE-RXN RHEA:16880 reaction UPa:UCR02466 3-sulfino-L-alanine = CO(2) + hypotaurine 1 LR 1 KEGG:R02466 KEGG reaction METACYC:SULFINOALANINE-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:16880 Rhea reaction 1 1 1 KEGG:R02467 METACYC:CYSTEAMINE-DIOXYGENASE-RXN RHEA:14412 reaction UPa:UCR02467 2-aminoethanethiol + O(2) = hypotaurine 1 LR 1 KEGG:R02467 KEGG reaction METACYC:CYSTEAMINE-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:14412 Rhea reaction 1 1 1 1 1 KEGG:R02472 METACYC:2-DEHYDROPANTOATE-REDUCT-RXN RHEA:16236 reaction UPa:UCR02472 (R)-pantoate + NADP(+) = 2-dehydropantoate + H(+) + NADPH 1 RL 1 KEGG:R02472 KEGG reaction METACYC:2-DEHYDROPANTOATE-REDUCT-RXN MetaCyc MetaCyc REACTION RHEA:16236 Rhea reaction 1 1 1 1 1 1 KEGG:R02473 METACYC:PANTOATE-BETA-ALANINE-LIG-RXN RHEA:10915 reaction UPa:UCR02473 (R)-pantoate + ATP + beta-alanine = (R)-pantothenate + AMP + diphosphate 1 LR 1 KEGG:R02473 KEGG reaction METACYC:PANTOATE-BETA-ALANINE-LIG-RXN MetaCyc MetaCyc REACTION RHEA:10915 Rhea reaction 1 1 1 1 KEGG:R02493 METACYC:PYRAMKIN-RXN RHEA:25107 reaction UPa:UCR02493 ATP + pyridoxamine = ADP + pyridoxamine 5'-phosphate 1 LR 1 KEGG:R02493 KEGG reaction METACYC:PYRAMKIN-RXN Rhea MetaCyc REACTION RHEA:25107 Rhea reaction 1 1 1 1 KEGG:R02494 RHEA:25138 reaction UPa:UCR02494 phosphate + pyridoxamine = H(2)O + pyridoxamine 5'-phosphate 1 RL 1 KEGG:R02494 KEGG reaction RHEA:25138 Rhea reaction 1 1 1 KEGG:R02519 METACYC:HOMOGENTISATE-12-DIOXYGENASE-RXN RHEA:15452 reaction UPa:UCR02519 O(2) + homogentisate = 4-maleylacetoacetate 1 LR 1 KEGG:R02519 KEGG reaction METACYC:HOMOGENTISATE-12-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:15452 Rhea reaction 1 1 1 1 KEGG:R02521 METACYC:4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN RHEA:16192 reaction UPa:UCR02521 (4-hydroxyphenyl)pyruvate + O(2) = CO(2) + homogentisate 1 LR 1 KEGG:R02521 KEGG reaction METACYC:4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:16192 Rhea reaction 1 1 1 KEGG:R02522 METACYC:L-ARABINONATE-DEHYDRATASE-RXN RHEA:20971 reaction UPa:UCR02522 L-arabinonate = 2-dehydro-3-deoxy-L-arabinonate + H(2)O 1 LR 1 KEGG:R02522 KEGG reaction METACYC:L-ARABINONATE-DEHYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:20971 Rhea reaction 1 1 1 KEGG:R02526 METACYC:L-ARABINONOLACTONASE-RXN RHEA:16220 reaction UPa:UCR02526 H(2)O + L-arabinono-1,4-lactone = L-arabinonate 1 LR 1 KEGG:R02526 KEGG reaction METACYC:L-ARABINONOLACTONASE-RXN MetaCyc MetaCyc REACTION RHEA:16220 Rhea reaction 1 1 1 KEGG:R02530 METACYC:GLYOXI-RXN RHEA:19072 reaction UPa:UCR02530 (R)-S-lactoylglutathione = glutathione + methylglyoxal 1 RL 1 KEGG:R02530 KEGG reaction METACYC:GLYOXI-RXN Rhea MetaCyc REACTION RHEA:19072 Rhea reaction 1 1 1 1 KEGG:R02533 METACYC:RXN66-241 RHEA:25272 reaction UPa:UCR02533 (R)-noradrenaline + S-adenosyl-L-methionine = (R)-adrenaline + S-adenosyl-L-homocysteine 1 LR 1 KEGG:R02533 KEGG reaction METACYC:RXN66-241 MetaCyc MetaCyc REACTION RHEA:25272 Rhea reaction 1 1 1 1 1 1 KEGG:R02535 METACYC:DOPAMINE-BETA-MONOOXYGENASE-RXN RHEA:19120 reaction UPa:UCR02535 L-ascorbate + O(2) + dopamine = (R)-noradrenaline + H(2)O + L-dehydroascorbate 1 LR 1 KEGG:R02535 KEGG reaction METACYC:DOPAMINE-BETA-MONOOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:19120 Rhea reaction 1 1 1 1 1 1 KEGG:R02536 METACYC:PHENDEHYD-RXN RHEA:21395 reaction UPa:UCR02536 H(2)O + NAD(+) + phenylacetaldehyde = H(+) + NADH + phenylacetate 1 LR 1 KEGG:R02536 KEGG reaction METACYC:PHENDEHYD-RXN Rhea MetaCyc REACTION RHEA:21395 Rhea reaction 1 1 1 1 1 KEGG:R02545 METACYC:RXN-8643 RHEA:16460 reaction UPa:UCR02545 NAD(+) + meso-tartrate = 2-hydroxy-3-oxosuccinate + H(+) + NADH 1 LR 1 KEGG:R02545 KEGG reaction METACYC:RXN-8643 Rhea MetaCyc REACTION RHEA:16460 Rhea reaction 1 1 1 1 1 1 KEGG:R02549 METACYC:AMINOBUTDEHYDROG-RXN RHEA:19108 reaction UPa:UCR02549 4-aminobutanal + H(2)O + NAD(+) = 4-aminobutanoate + H(+) + NADH 1 LR 1 KEGG:R02549 KEGG reaction METACYC:AMINOBUTDEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:19108 Rhea reaction 1 1 1 1 1 KEGG:R02553 METACYC:CYCLOPENTANOL-DEHYDROGENASE-RXN RHEA:11731 reaction UPa:UCR02553 NAD(+) + cyclopentanol = H(+) + NADH + cyclopentanone 1 LR 1 KEGG:R02553 KEGG reaction METACYC:CYCLOPENTANOL-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:11731 Rhea reaction 1 1 1 1 1 1 1 KEGG:R02554 METACYC:CYCLOPENTANONE-MONOOXYGENASE-RXN RHEA:15740 reaction UPa:UCR02554 H(+) + NADPH + O(2) + cyclopentanone = 5-valerolactone + H(2)O + NADP(+) 1 LR 1 KEGG:R02554 KEGG reaction METACYC:CYCLOPENTANONE-MONOOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:15740 Rhea reaction 1 1 1 1 1 1 KEGG:R02565 METACYC:BADH-RXN RHEA:15308 reaction UPa:UCR02565 H(2)O + NAD(+) + betaine aldehyde = 2 H(+) + NADH + betaine 1 LR 1 KEGG:R02565 KEGG reaction METACYC:BADH-RXN Rhea MetaCyc REACTION RHEA:15308 Rhea reaction 1 1 1 1 KEGG:R02571 reaction UPa:UCR02571 Enzyme N6-(dihydrolipoyl)lysine + glutaryl-CoA = CoA + S(8)-glutaryldihydrolipoamide 1 RL 1 KEGG:R02571 KEGG reaction 1 1 1 KEGG:R02601 METACYC:2-OXOPENT-4-ENOATE-HYDRATASE-RXN RHEA:22583 reaction UPa:UCR02601 2-hydroxy-2,4-pentadienoate + H(2)O = 4-hydroxy-2-oxopentanoate 1 1 LR 1 LR 1 KEGG:R02601 KEGG reaction METACYC:2-OXOPENT-4-ENOATE-HYDRATASE-RXN Rhea MetaCyc REACTION RHEA:22583 Rhea reaction 1 1 1 1 KEGG:R02603 METACYC:MHPCHYDROL-RXN RHEA:24792 reaction UPa:UCR02603 2-hydroxy-2,4-pentadienoate + succinate = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate + H(2)O 1 RL 1 KEGG:R02603 KEGG reaction METACYC:MHPCHYDROL-RXN Rhea MetaCyc REACTION RHEA:24792 Rhea reaction 1 1 1 1 KEGG:R02606 METACYC:3.7.1.8-RXN RHEA:17164 reaction UPa:UCR02606 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H(2)O = 2-hydroxy-2,4-pentadienoate + benzoate 1 LR 1 KEGG:R02606 KEGG reaction METACYC:3.7.1.8-RXN MetaCyc MetaCyc REACTION RHEA:17164 Rhea reaction 1 1 1 1 1 1 KEGG:R02613 METACYC:AMINEPHEN-RXN RHEA:25268 reaction UPa:UCR02613 2-phenylethylamine + H(2)O + O(2) = H(2)O(2) + NH(3) + phenylacetaldehyde 1 LR 1 KEGG:R02613 KEGG reaction METACYC:AMINEPHEN-RXN MetaCyc MetaCyc REACTION RHEA:25268 Rhea reaction 1 1 1 1 KEGG:R02649 METACYC:ACETYLGLUTKIN-RXN RHEA:14632 reaction UPa:UCR02649 ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate 1 LR 1 KEGG:R02649 KEGG reaction METACYC:ACETYLGLUTKIN-RXN Rhea MetaCyc REACTION RHEA:14632 Rhea reaction 1 1 1 1 KEGG:R02664 RHEA:42411 reaction UPa:UCR02664 2-phospho-D-glycerate + ATP = 2,3-bisphospho-D-glycerate + ADP 1 LR 1 KEGG:R02664 KEGG reaction RHEA:42411 Rhea reaction 1 1 1 KEGG:R02665 METACYC:1.13.11.6-RXN RHEA:17956 reaction UPa:UCR02665 3-hydroxyanthranilate + O(2) = 2-amino-3-carboxymuconate semialdehyde 1 LR 1 KEGG:R02665 KEGG reaction METACYC:1.13.11.6-RXN MetaCyc MetaCyc REACTION RHEA:17956 Rhea reaction 1 1 1 1 KEGG:R02668 METACYC:3-HYDROXY-KYNURENINASE-RXN RHEA:25146 reaction UPa:UCR02668 3-hydroxy-L-kynurenine + H(2)O = 3-hydroxyanthranilate + L-alanine 1 LR 1 KEGG:R02668 KEGG reaction METACYC:3-HYDROXY-KYNURENINASE-RXN MetaCyc MetaCyc REACTION RHEA:25146 Rhea reaction 1 1 1 1 1 1 1 KEGG:R02698 RHEA:16684 reaction UPa:UCR02698 4-hydroxyphenylacetate + H(+) + NADH + O(2) = (3,4-dihydroxyphenyl)acetate + H(2)O + NAD(+) 1 LR 1 KEGG:R02698 KEGG reaction RHEA:16684 Rhea reaction 1 1 1 KEGG:R02701 METACYC:RXN3DJ-170 RHEA:18536 reaction UPa:UCR02701 5-hydroxy-L-tryptophan = CO(2) + serotonin 1 LR 1 KEGG:R02701 KEGG reaction METACYC:RXN3DJ-170 MetaCyc MetaCyc REACTION RHEA:18536 Rhea reaction 1 1 1 1 KEGG:R02705 METACYC:NANK-RXN RHEA:25256 reaction UPa:UCR02705 ATP + N-acetyl-D-mannosamine = ADP + N-acetyl-D-mannosamine 6-phosphate 1 LR 1 KEGG:R02705 KEGG reaction METACYC:NANK-RXN MetaCyc MetaCyc REACTION RHEA:25256 Rhea reaction 1 1 1 1 KEGG:R02715 METACYC:1.1.3.37-RXN RHEA:23759 reaction UPa:UCR02715 D-arabinono-1,4-lactone + O(2) = H(2)O(2) + dehydro-D-arabinono-1,4-lactone 1 LR 1 KEGG:R02715 KEGG reaction METACYC:1.1.3.37-RXN Rhea MetaCyc REACTION RHEA:23759 Rhea reaction 1 1 1 1 KEGG:R02733 METACYC:N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN RHEA:20408 reaction UPa:UCR02733 H(2)O + N-acetyl-LL-2,6-diaminopimelate = LL-2,6-diaminopimelate + acetate 1 LR 1 KEGG:R02733 KEGG reaction METACYC:N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN MetaCyc MetaCyc REACTION RHEA:20408 Rhea reaction 1 1 1 1 KEGG:R02734 METACYC:SUCCDIAMINOPIMDESUCC-RXN RHEA:22611 reaction UPa:UCR02734 H(2)O + N-succinyl-LL-2,6-diaminopimelate = LL-2,6-diaminopimelate + succinate 1 LR 1 KEGG:R02734 KEGG reaction METACYC:SUCCDIAMINOPIMDESUCC-RXN Rhea MetaCyc REACTION RHEA:22611 Rhea reaction 1 1 KEGG:R02735 METACYC:DIAMINOPIMEPIM-RXN RHEA:15396 reaction UPa:UCR02735 LL-2,6-diaminopimelate = DL-2,6-diaminopimelate 1 LR 1 KEGG:R02735 KEGG reaction METACYC:DIAMINOPIMEPIM-RXN Rhea MetaCyc REACTION RHEA:15396 Rhea reaction 1 1 KEGG:R02749 METACYC:D-PPENTOMUT-RXN RHEA:25208 RHEA:27661 reaction UPa:UCR02749 2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-D-ribose 5-phosphate 1 LR 1 KEGG:R02749 KEGG reaction METACYC:D-PPENTOMUT-RXN Rhea MetaCyc REACTION RHEA:25208 Rhea reaction RHEA:27661 Rhea reaction 1 1 1 KEGG:R02752 METACYC:GLUCARDEHYDRA-RXN RHEA:14576 reaction UPa:UCR02752 D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H(2)O 1 LR 1 KEGG:R02752 KEGG reaction METACYC:GLUCARDEHYDRA-RXN MetaCyc MetaCyc REACTION RHEA:14576 Rhea reaction 1 1 1 KEGG:R02754 METACYC:KDGALDOL-RXN RHEA:27729 reaction UPa:UCR02754 5-dehydro-4-deoxy-D-glucarate = 2-hydroxy-3-oxopropanoate + pyruvate 1 LR 1 KEGG:R02754 KEGG reaction METACYC:KDGALDOL-RXN Rhea MetaCyc REACTION RHEA:27729 Rhea reaction 1 1 1 1 1 1 1 KEGG:R02755 METACYC:DIAMINOPIMELATE-DEHYDROGENASE-RXN RHEA:13564 reaction UPa:UCR02755 DL-2,6-diaminopimelate + H(2)O + NADP(+) = (S)-2-amino-6-oxopimelate + H(+) + NADPH + NH(3) 1 RL 2 KEGG:R02755 KEGG reaction METACYC:DIAMINOPIMELATE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:13564 Rhea reaction 1 1 KEGG:R02765 METACYC:METHYLMALONYL-COA-EPIM-RXN RHEA:20556 reaction UPa:UCR02765 (R)-methylmalonyl-CoA = (S)-methylmalonyl-CoA 1 RL 1 KEGG:R02765 KEGG reaction METACYC:METHYLMALONYL-COA-EPIM-RXN Rhea MetaCyc REACTION RHEA:20556 Rhea reaction 1 1 1 KEGG:R02782 METACYC:MYO-INOSOSE-2-DEHYDRATASE-RXN RHEA:14068 reaction UPa:UCR02782 scyllo-inosose = 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H(2)O 1 LR 1 KEGG:R02782 KEGG reaction METACYC:MYO-INOSOSE-2-DEHYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:14068 Rhea reaction 1 1 1 1 1 1 KEGG:R02804 METACYC:RXN-12130 RHEA:15496 RHEA:43111 reaction UPa:UCR02804 H(2)O + dinitrogen + 2 ferricytochrome c = 2 H(+) + 2 ferrocytochrome c + nitrous oxide 1 RL 1 KEGG:R02804 KEGG reaction METACYC:RXN-12130 Rhea MetaCyc REACTION RHEA:15496 Rhea reaction RHEA:43111 Rhea reaction 1 1 1 1 KEGG:R02821 METACYC:2.1.1.5-RXN RHEA:22339 reaction UPa:UCR02821 L-homocysteine + betaine = L-methionine + N,N-dimethylglycine 1 1 LR 1 LR 1 KEGG:R02821 KEGG reaction METACYC:2.1.1.5-RXN MetaCyc MetaCyc REACTION RHEA:22339 Rhea reaction 1 1 1 1 1 KEGG:R02860 METACYC:NICOTINE-DEHYDROGENASE-RXN RHEA:14772 reaction UPa:UCR02860 H(2)O + acceptor + nicotine = (S)-6-hydroxynicotine + reduced acceptor 1 LR 1 KEGG:R02860 KEGG reaction METACYC:NICOTINE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:14772 Rhea reaction 1 1 1 1 KEGG:R02864 METACYC:SIROHEME-FERROCHELAT-RXN RHEA:24363 reaction UPa:UCR02864 2 H(+) + siroheme = Fe2+ + sirohydrochlorin 1 RL 1 KEGG:R02864 KEGG reaction METACYC:SIROHEME-FERROCHELAT-RXN Rhea MetaCyc REACTION RHEA:24363 Rhea reaction 1 1 1 1 KEGG:R02869 METACYC:SPERMINE-SYNTHASE-RXN RHEA:19976 reaction UPa:UCR02869 S-adenosylmethioninamine + spermidine = S-methyl-5'-thioadenosine + spermine 1 LR 1 KEGG:R02869 KEGG reaction METACYC:SPERMINE-SYNTHASE-RXN MetaCyc MetaCyc REACTION RHEA:19976 Rhea reaction 1 1 1 1 1 1 1 KEGG:R02874 METACYC:SQUALENE-MONOOXYGENASE-RXN RHEA:25285 reaction UPa:UCR02874 H(+) + NADPH + O(2) + squalene = (S)-2,3-epoxysqualene + H(2)O + NADP(+) 1 LR 1 KEGG:R02874 KEGG reaction METACYC:SQUALENE-MONOOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:25285 Rhea reaction 1 1 1 1 KEGG:R02911 METACYC:RXN3DJ-35528 RHEA:25220 reaction UPa:UCR02911 acetyl-CoA + serotonin = CoA + N-acetylserotonin 1 LR 1 KEGG:R02911 KEGG reaction METACYC:RXN3DJ-35528 MetaCyc MetaCyc REACTION RHEA:25220 Rhea reaction 1 1 1 KEGG:R02914 METACYC:UROCANATE-HYDRATASE-RXN RHEA:13104 reaction UPa:UCR02914 4-imidazolone-5-propanoate = H(2)O + trans-urocanate 1 RL 1 KEGG:R02914 KEGG reaction METACYC:UROCANATE-HYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:13104 Rhea reaction 1 1 1 1 KEGG:R02922 METACYC:CREATININE-DEAMINASE-RXN RHEA:12684 reaction UPa:UCR02922 H(2)O + creatinine = N-methylhydantoin + NH(3) 1 LR 1 KEGG:R02922 KEGG reaction METACYC:CREATININE-DEAMINASE-RXN MetaCyc MetaCyc REACTION RHEA:12684 Rhea reaction 1 1 1 KEGG:R02933 METACYC:RXN-8783 RHEA:42519 reaction UPa:UCR02933 H(2)O + L-gulono-1,4-lactone = L-gulonate 1 RL 1 KEGG:R02933 KEGG reaction METACYC:RXN-8783 MetaCyc MetaCyc REACTION RHEA:42519 Rhea reaction 1 1 1 1 1 KEGG:R02935 RHEA:15332 reaction UPa:UCR02935 (S)-ureidoglycolate + NAD(+) = H(+) + NADH + oxalurate 1 LR 1 KEGG:R02935 KEGG reaction RHEA:15332 Rhea reaction 1 1 1 1 1 KEGG:R02936 METACYC:R165-RXN RHEA:15336 reaction UPa:UCR02936 (S)-ureidoglycolate + NADP(+) = H(+) + NADPH + oxalurate 1 LR 1 KEGG:R02936 KEGG reaction METACYC:R165-RXN MetaCyc MetaCyc REACTION RHEA:15336 Rhea reaction 1 1 1 1 1 KEGG:R02946 METACYC:RR-BUTANEDIOL-DEHYDROGENASE-RXN RHEA:24343 reaction UPa:UCR02946 (R,R)-butane-2,3-diol + NAD(+) = (R)-acetoin + H(+) + NADH 1 RL 1 KEGG:R02946 KEGG reaction METACYC:RR-BUTANEDIOL-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:24343 Rhea reaction 1 1 1 KEGG:R02948 METACYC:ACETOLACTATE-DECARBOXYLASE-RXN RHEA:21583 reaction UPa:UCR02948 (S)-2-acetolactate = (R)-acetoin + CO(2) 1 LR 1 KEGG:R02948 KEGG reaction METACYC:ACETOLACTATE-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:21583 Rhea reaction 1 1 1 1 1 KEGG:R02988 RHEA:16984 reaction UPa:UCR02988 3-oxoadipate + NAD(+) = H(+) + NADH + maleylacetate 1 RL 1 KEGG:R02988 KEGG reaction RHEA:16984 Rhea reaction 1 1 1 1 1 KEGG:R02989 METACYC:MALEYLACETATE-REDUCTASE-RXN RHEA:16988 reaction UPa:UCR02989 3-oxoadipate + NADP(+) = H(+) + NADPH + maleylacetate 1 RL 1 KEGG:R02989 KEGG reaction METACYC:MALEYLACETATE-REDUCTASE-RXN MetaCyc MetaCyc REACTION RHEA:16988 Rhea reaction 1 1 1 1 KEGG:R02990 METACYC:3-OXOADIPATE-COA-TRANSFERASE-RXN RHEA:12051 reaction UPa:UCR02990 3-oxoadipate + succinyl-CoA = 3-oxoadipyl-CoA + succinate 1 LR 1 KEGG:R02990 KEGG reaction METACYC:3-OXOADIPATE-COA-TRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:12051 Rhea reaction 1 1 1 KEGG:R02991 METACYC:3-OXOADIPATE-ENOL-LACTONASE-RXN RHEA:10187 reaction UPa:UCR02991 5-oxo-4,5-dihydro-2-furylacetate + H(2)O = 3-oxoadipate 1 LR 1 KEGG:R02991 KEGG reaction METACYC:3-OXOADIPATE-ENOL-LACTONASE-RXN MetaCyc MetaCyc REACTION RHEA:10187 Rhea reaction 1 1 1 KEGG:R02992 METACYC:4-PYRIDOXOLACTONASE-RXN RHEA:14304 reaction UPa:UCR02992 4-pyridoxolactone + H(2)O = 4-pyridoxate 1 LR 1 KEGG:R02992 KEGG reaction METACYC:4-PYRIDOXOLACTONASE-RXN Rhea MetaCyc REACTION RHEA:14304 Rhea reaction 1 1 1 1 KEGG:R03005 METACYC:NICONUCADENYLYLTRAN-RXN RHEA:22863 reaction UPa:UCR03005 ATP + nicotinate D-ribonucleotide = deamido-NAD(+) + diphosphate 1 LR 1 KEGG:R03005 KEGG reaction METACYC:NICONUCADENYLYLTRAN-RXN MetaCyc MetaCyc REACTION RHEA:22863 Rhea reaction 1 1 1 1 KEGG:R03013 METACYC:HISTIDPHOS-RXN RHEA:14468 reaction UPa:UCR03013 H(2)O + L-histidinol phosphate = L-histidinol + phosphate 1 LR 1 KEGG:R03013 KEGG reaction METACYC:HISTIDPHOS-RXN MetaCyc MetaCyc REACTION RHEA:14468 Rhea reaction 1 1 1 1 KEGG:R03014 METACYC:RHAMNULOKIN-RXN RHEA:20120 reaction UPa:UCR03014 ATP + L-rhamnulose = ADP + L-rhamnulose 1-phosphate 1 LR 1 KEGG:R03014 KEGG reaction METACYC:RHAMNULOKIN-RXN MetaCyc MetaCyc REACTION RHEA:20120 Rhea reaction 1 1 1 1 1 1 KEGG:R03015 METACYC:FORMYLMETHANOFURAN-DEHYDROGENASE-RXN RHEA:19844 reaction UPa:UCR03015 H(2)O + N-formylmethanofuran + acceptor = CO(2) + methanofuran + reduced acceptor 1 RL 1 KEGG:R03015 KEGG reaction METACYC:FORMYLMETHANOFURAN-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:19844 Rhea reaction 1 1 1 1 KEGG:R03018 METACYC:PANTOTHENATE-KIN-RXN RHEA:16376 reaction UPa:UCR03018 (R)-pantothenate + ATP = (R)-4'-phosphopantothenate + ADP 1 LR 1 KEGG:R03018 KEGG reaction METACYC:PANTOTHENATE-KIN-RXN MetaCyc MetaCyc REACTION RHEA:16376 Rhea reaction 1 1 1 KEGG:R03028 METACYC:GLUTACONYL-COA-DECARBOXYLASE-RXN RHEA:23975 reaction UPa:UCR03028 glutaconyl-1-CoA = CO(2) + crotonoyl-CoA 1 LR 1 KEGG:R03028 KEGG reaction METACYC:GLUTACONYL-COA-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:23975 Rhea reaction 1 1 1 KEGG:R03033 METACYC:GALACTONDEHYDRAT-RXN RHEA:18652 reaction UPa:UCR03033 D-galactonate = 2-dehydro-3-deoxy-D-galactonate + H(2)O 1 LR 1 KEGG:R03033 KEGG reaction METACYC:GALACTONDEHYDRAT-RXN MetaCyc MetaCyc REACTION RHEA:18652 Rhea reaction 1 1 1 1 KEGG:R03035 METACYC:PANTEPADENYLYLTRAN-RXN RHEA:19804 reaction UPa:UCR03035 ATP + pantotheine 4'-phosphate = 3'-dephospho-CoA + diphosphate 1 LR 1 KEGG:R03035 KEGG reaction METACYC:PANTEPADENYLYLTRAN-RXN Rhea MetaCyc REACTION RHEA:19804 Rhea reaction 1 1 1 1 KEGG:R03067 METACYC:H2PTEROATESYNTH-RXN RHEA:19952 reaction UPa:UCR03067 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = 7,8-dihydropteroate + diphosphate 1 LR 1 KEGG:R03067 KEGG reaction METACYC:H2PTEROATESYNTH-RXN MetaCyc MetaCyc REACTION RHEA:19952 Rhea reaction 1 1 1 KEGG:R03069 METACYC:DIMETHYLMALEATE-HYDRATASE-RXN RHEA:20256 reaction UPa:UCR03069 H(2)O + dimethylmaleate = (2R,3S)-2,3-dimethylmalate 1 LR 1 KEGG:R03069 KEGG reaction METACYC:DIMETHYLMALEATE-HYDRATASE-RXN Rhea MetaCyc REACTION RHEA:20256 Rhea reaction 1 1 KEGG:R03070 METACYC:METHYLITACONATE-DELTA-ISOMERASE-RXN RHEA:23483 reaction UPa:UCR03070 2-methylene-3-methylsuccinate = dimethylmaleate 1 LR 1 KEGG:R03070 KEGG reaction METACYC:METHYLITACONATE-DELTA-ISOMERASE-RXN MetaCyc MetaCyc REACTION RHEA:23483 Rhea reaction 1 1 1 KEGG:R03083 METACYC:3-DEHYDROQUINATE-SYNTHASE-RXN RHEA:21971 reaction UPa:UCR03083 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-dehydroquinate + phosphate 1 LR 1 KEGG:R03083 KEGG reaction METACYC:3-DEHYDROQUINATE-SYNTHASE-RXN Rhea MetaCyc REACTION RHEA:21971 Rhea reaction 1 1 1 KEGG:R03084 METACYC:3-DEHYDROQUINATE-DEHYDRATASE-RXN RHEA:21099 reaction UPa:UCR03084 3-dehydroquinate = 3-dehydroshikimate + H(2)O 1 1 LR 1 LR 1 KEGG:R03084 KEGG reaction METACYC:3-DEHYDROQUINATE-DEHYDRATASE-RXN Rhea MetaCyc REACTION RHEA:21099 Rhea reaction 1 1 1 1 KEGG:R03098 reaction UPa:UCR03098 ATP + L-alpha-aminoadipate = alpha-aminoadipoyl-C6-AMP + diphosphate 1 LR 1 KEGG:R03098 KEGG reaction 1 1 1 1 1 1 KEGG:R03102 METACYC:ALLYSINE-DEHYDROG-RXN RHEA:12311 reaction UPa:UCR03102 H(2)O + L-2-aminoadipate 6-semialdahyde + NAD(+) = H(+) + L-alpha-aminoadipate + NADH 1 LR 1 KEGG:R03102 KEGG reaction METACYC:ALLYSINE-DEHYDROG-RXN Rhea MetaCyc REACTION RHEA:12311 Rhea reaction 1 1 1 1 1 1 KEGG:R03103 METACYC:1.2.1.31-RXN RHEA:12307 reaction UPa:UCR03103 H(2)O + L-2-aminoadipate 6-semialdahyde + NADP(+) = H(+) + L-alpha-aminoadipate + NADPH 1 LR 1 KEGG:R03103 KEGG reaction METACYC:1.2.1.31-RXN MetaCyc MetaCyc REACTION RHEA:12307 Rhea reaction 1 1 1 1 1 KEGG:R03119 METACYC:13-PROPANEDIOL-DEHYDROGENASE-RXN RHEA:23191 reaction UPa:UCR03119 NAD(+) + propane-1,3-diol = 3-hydroxypropanal + H(+) + NADH 1 RL 1 KEGG:R03119 KEGG reaction METACYC:13-PROPANEDIOL-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:23191 Rhea reaction 1 1 1 1 KEGG:R03130 METACYC:ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN RHEA:15576 reaction UPa:UCR03130 N-acetylserotonin + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + melatonin 1 LR 1 KEGG:R03130 KEGG reaction METACYC:ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN MetaCyc MetaCyc REACTION RHEA:15576 Rhea reaction 1 1 KEGG:R03163 METACYC:FUCISOM-RXN RHEA:17236 reaction UPa:UCR03163 L-fucose = L-fuculose 1 LR 1 KEGG:R03163 KEGG reaction METACYC:FUCISOM-RXN Rhea MetaCyc REACTION RHEA:17236 Rhea reaction 1 1 1 1 KEGG:R03164 METACYC:6-HYDROXYNICOTINATE-REDUCTASE-RXN RHEA:17228 reaction UPa:UCR03164 6-hydroxynicotinate + reduced ferredoxin = 6-hydroxynicotinate + oxidized ferredoxin 1 LR 1 KEGG:R03164 KEGG reaction METACYC:6-HYDROXYNICOTINATE-REDUCTASE-RXN MetaCyc MetaCyc REACTION RHEA:17228 Rhea reaction 1 1 1 KEGG:R03165 METACYC:UROGENIIISYN-RXN RHEA:18968 reaction UPa:UCR03165 hydroxymethylbilane = H(2)O + uroporphyrinogen III 1 LR 1 KEGG:R03165 KEGG reaction METACYC:UROGENIIISYN-RXN Rhea MetaCyc REACTION RHEA:18968 Rhea reaction 1 1 KEGG:R03181 METACYC:MALEYLACETOACETATE-ISOMERASE-RXN RHEA:14820 reaction UPa:UCR03181 4-maleylacetoacetate = 4-fumarylacetoacetate 1 LR 1 KEGG:R03181 KEGG reaction METACYC:MALEYLACETOACETATE-ISOMERASE-RXN MetaCyc MetaCyc REACTION RHEA:14820 Rhea reaction 1 1 1 1 1 1 KEGG:R03182 METACYC:DETHIOBIOTIN-SYN-RXN RHEA:15808 reaction UPa:UCR03182 7,8-diaminononanoate + ATP + CO(2) = ADP + dethiobiotin + phosphate 1 LR 1 KEGG:R03182 KEGG reaction METACYC:DETHIOBIOTIN-SYN-RXN Rhea MetaCyc REACTION RHEA:15808 Rhea reaction 1 1 1 1 KEGG:R03184 METACYC:L-GULONOLACTONE-OXIDASE-RXN RHEA:12355 reaction UPa:UCR03184 L-gulono-1,4-lactone + O(2) = H(2)O(2) + L-xylo-hexulonolactone 1 LR 1 KEGG:R03184 KEGG reaction METACYC:L-GULONOLACTONE-OXIDASE-RXN MetaCyc MetaCyc REACTION RHEA:12355 Rhea reaction 1 1 1 1 1 1 KEGG:R03187 METACYC:3.5.2.14-RXN RHEA:11723 reaction UPa:UCR03187 ATP + 2 H(2)O + N-methylhydantoin = ADP + N-carbamoylsarcosine + phosphate 1 LR 1 KEGG:R03187 KEGG reaction METACYC:3.5.2.14-RXN MetaCyc MetaCyc REACTION RHEA:11723 Rhea reaction 1 1 1 1 KEGG:R03194 reaction UPa:UCR03194 2 S-adenosyl-L-methionine + uroporphyrinogen III = 2 S-adenosyl-L-homocysteine + precorrin-2 1 LR 1 KEGG:R03194 KEGG reaction 1 1 1 KEGG:R03197 METACYC:UROGENDECARBOX-RXN RHEA:19868 reaction UPa:UCR03197 uroporphyrinogen III = 4 CO(2) + coproporphyrinogen-III 1 LR 1 KEGG:R03197 KEGG reaction METACYC:UROGENDECARBOX-RXN MetaCyc MetaCyc REACTION RHEA:19868 Rhea reaction 1 1 KEGG:R03199 METACYC:LANOSTEROL-SYNTHASE-RXN RHEA:14624 reaction UPa:UCR03199 (S)-2,3-epoxysqualene = lanosterol 1 LR 1 KEGG:R03199 KEGG reaction METACYC:LANOSTEROL-SYNTHASE-RXN MetaCyc MetaCyc REACTION RHEA:14624 Rhea reaction 1 1 1 1 1 KEGG:R03202 METACYC:S-6-HYDROXYNICOTINE-OXIDASE-RXN RHEA:11883 reaction UPa:UCR03202 (S)-6-hydroxynicotine + H(2)O + O(2) = 6-hydroxypseudooxynicotine + H(2)O(2) 1 LR 1 KEGG:R03202 KEGG reaction METACYC:S-6-HYDROXYNICOTINE-OXIDASE-RXN MetaCyc MetaCyc REACTION RHEA:11883 Rhea reaction 1 1 1 1 1 1 KEGG:R03209 METACYC:6-CARBOXYHEXANOATE--COA-LIGASE-RXN RHEA:14784 reaction UPa:UCR03209 ATP + CoA + pimelate = AMP + diphosphate + pimeloyl-CoA 1 LR 1 KEGG:R03209 KEGG reaction METACYC:6-CARBOXYHEXANOATE--COA-LIGASE-RXN Rhea MetaCyc REACTION RHEA:14784 Rhea reaction 1 1 1 1 1 KEGG:R03210 METACYC:7KAPSYN-RXN RHEA:20715 RHEA:42291 reaction UPa:UCR03210 L-alanine + pimeloyl-CoA = 8-amino-7-oxononanoate + CO(2) + CoA 1 LR 1 KEGG:R03210 KEGG reaction METACYC:7KAPSYN-RXN Rhea MetaCyc REACTION RHEA:20715 Rhea reaction RHEA:42291 Rhea reaction 1 1 1 1 KEGG:R03217 METACYC:RXN-721 RHEA:30934 reaction UPa:UCR03217 L-cysteine + O-acetyl-L-homoserine = L-cystathionine + acetate 1 LR 1 KEGG:R03217 KEGG reaction METACYC:RXN-721 Rhea MetaCyc REACTION RHEA:30934 Rhea reaction 1 1 1 1 1 KEGG:R03220 METACYC:RXN0-1461 RHEA:18260 reaction UPa:UCR03220 O(2) + coproporphyrinogen-III = 2 CO(2) + 2 H(2)O + protoporphyrinogen-IX 1 LR 1 KEGG:R03220 KEGG reaction METACYC:RXN0-1461 MetaCyc MetaCyc REACTION RHEA:18260 Rhea reaction 1 1 1 1 KEGG:R03222 METACYC:PROTOPORGENOXI-RXN RHEA:25579 reaction UPa:UCR03222 3 O(2) + protoporphyrinogen-IX = 3 H(2)O(2) + protoporphyrin-IX 1 LR 1 KEGG:R03222 KEGG reaction METACYC:PROTOPORGENOXI-RXN MetaCyc MetaCyc REACTION RHEA:25579 Rhea reaction 1 1 1 1 KEGG:R03223 METACYC:THI-P-SYN-RXN RHEA:22331 reaction UPa:UCR03223 4-amino-2-methyl-5-diphosphomethylpyrimidine + 4-methyl-5-(2-phosphoethyl)-thiazole = diphosphate + thiamine phosphate 1 LR 1 KEGG:R03223 KEGG reaction METACYC:THI-P-SYN-RXN MetaCyc MetaCyc REACTION RHEA:22331 Rhea reaction 1 1 1 1 KEGG:R03230 METACYC:2.3.1.107-RXN RHEA:24499 reaction UPa:UCR03230 acetyl-CoA + deacetylvindoline = CoA + vindoline 1 LR 1 KEGG:R03230 KEGG reaction METACYC:2.3.1.107-RXN MetaCyc MetaCyc REACTION RHEA:24499 Rhea reaction 1 1 1 1 KEGG:R03231 METACYC:DAPASYN-RXN RHEA:16864 reaction UPa:UCR03231 8-amino-7-oxononanoate + S-adenosyl-L-methionine = 7,8-diaminononanoate + S-adenosyl-4-methylthio-2-oxobutanoic acid 1 LR 1 KEGG:R03231 KEGG reaction METACYC:DAPASYN-RXN Rhea MetaCyc REACTION RHEA:16864 Rhea reaction 1 1 1 1 KEGG:R03236 METACYC:TAGAKIN-RXN RHEA:12423 reaction UPa:UCR03236 ATP + D-tagatose 6-phosphate = ADP + D-tagatose 1,6-bisphosphate 1 LR 1 KEGG:R03236 KEGG reaction METACYC:TAGAKIN-RXN MetaCyc MetaCyc REACTION RHEA:12423 Rhea reaction 1 1 KEGG:R03240 METACYC:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN RHEA:13036 reaction UPa:UCR03240 D-galactose 6-phosphate = D-tagatose 6-phosphate 1 LR 1 KEGG:R03240 KEGG reaction METACYC:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN Rhea MetaCyc REACTION RHEA:13036 Rhea reaction 1 1 1 1 KEGG:R03241 METACYC:FUCULOKIN-RXN RHEA:12379 reaction UPa:UCR03241 ATP + L-fuculose = ADP + L-fuculose 1-phosphate 1 LR 1 KEGG:R03241 KEGG reaction METACYC:FUCULOKIN-RXN MetaCyc MetaCyc REACTION RHEA:12379 Rhea reaction 1 1 1 1 KEGG:R03243 METACYC:HISTAMINOTRANS-RXN RHEA:23747 reaction UPa:UCR03243 2-oxoglutarate + L-histidinol phosphate = L-glutamate + imidazole-acetol phosphate 1 RL 1 KEGG:R03243 KEGG reaction METACYC:HISTAMINOTRANS-RXN Rhea MetaCyc REACTION RHEA:23747 Rhea reaction 1 1 KEGG:R03244 METACYC:LXULRU5P-RXN RHEA:18500 reaction UPa:UCR03244 L-ribulose 5-phosphate = L-xylulose 5-phosphate 1 RL 1 KEGG:R03244 KEGG reaction METACYC:LXULRU5P-RXN MetaCyc MetaCyc REACTION RHEA:18500 Rhea reaction 1 1 1 1 KEGG:R03245 METACYC:PHOSPHOMEVALONATE-KINASE-RXN RHEA:16344 reaction UPa:UCR03245 (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP 1 LR 1 KEGG:R03245 KEGG reaction METACYC:PHOSPHOMEVALONATE-KINASE-RXN Rhea MetaCyc REACTION RHEA:16344 Rhea reaction 1 1 1 1 1 KEGG:R03254 METACYC:KDO-8PSYNTH-RXN RHEA:14056 reaction UPa:UCR03254 8-phospho-3-deoxy-D-manno-octulosonate + phosphate = D-arabinose 5-phosphate + H(2)O + phosphoenolpyruvate 1 RL 1 KEGG:R03254 KEGG reaction METACYC:KDO-8PSYNTH-RXN MetaCyc MetaCyc REACTION RHEA:14056 Rhea reaction 1 1 1 1 KEGG:R03256 METACYC:LACTOSE6P-HYDROXY-RXN RHEA:42407 reaction UPa:UCR03256 H(2)O + lactose 6-phosphate = D-galactose 6-phosphate + beta-D-glucose 1 LR 1 KEGG:R03256 KEGG reaction METACYC:LACTOSE6P-HYDROXY-RXN MetaCyc MetaCyc REACTION RHEA:42407 Rhea reaction 1 1 1 1 KEGG:R03260 METACYC:O-SUCCHOMOSERLYASE-RXN RHEA:20400 reaction UPa:UCR03260 L-cysteine + O-succinyl-L-homoserine = L-cystathionine + succinate 1 LR 1 KEGG:R03260 KEGG reaction METACYC:O-SUCCHOMOSERLYASE-RXN MetaCyc MetaCyc REACTION RHEA:20400 Rhea reaction 1 1 1 KEGG:R03269 METACYC:P-PANTOCYSDECARB-RXN RHEA:16796 reaction UPa:UCR03269 N-[(R)-4-phosphonopantothenoyl]-L-cysteine = CO(2) + pantotheine 4'-phosphate 1 LR 1 KEGG:R03269 KEGG reaction METACYC:P-PANTOCYSDECARB-RXN MetaCyc MetaCyc REACTION RHEA:16796 Rhea reaction 1 1 1 1 1 KEGG:R03298 RHEA:42415 reaction UPa:UCR03298 2,3-bisphospho-D-glycerate + ATP = ADP + cyclic 2,3-diphosphoglycerate + phosphate 1 LR 1 KEGG:R03298 KEGG reaction RHEA:42415 Rhea reaction 1 1 1 KEGG:R03303 METACYC:1.13.11.15-RXN RHEA:15636 reaction UPa:UCR03303 (3,4-dihydroxyphenyl)acetate + O(2) = 5-carboxymethyl-2-hydroxymuconate semialdehyde 1 LR 1 KEGG:R03303 KEGG reaction METACYC:1.13.11.15-RXN MetaCyc MetaCyc REACTION RHEA:15636 Rhea reaction 1 1 KEGG:R03307 METACYC:5.5.1.2-RXN RHEA:23659 reaction UPa:UCR03307 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 3-carboxy-cis,cis-muconate 1 RL 1 KEGG:R03307 KEGG reaction METACYC:5.5.1.2-RXN MetaCyc MetaCyc REACTION RHEA:23659 Rhea reaction 1 1 KEGG:R03308 METACYC:CARBOXY-CISCIS-MUCONATE-CYCLASE-RXN RHEA:14980 reaction UPa:UCR03308 3-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 3-carboxy-cis,cis-muconate 1 LR 1 KEGG:R03308 KEGG reaction METACYC:CARBOXY-CISCIS-MUCONATE-CYCLASE-RXN Rhea MetaCyc REACTION RHEA:14980 Rhea reaction 1 1 1 1 1 1 KEGG:R03313 METACYC:GLUTSEMIALDEHYDROG-RXN RHEA:19544 reaction UPa:UCR03313 L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + L-glutamyl 5-phosphate + NADPH 1 RL 1 KEGG:R03313 KEGG reaction METACYC:GLUTSEMIALDEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:19544 Rhea reaction 1 1 1 KEGG:R03314 METACYC:SPONTPRO-RXN RHEA:28237 reaction UPa:UCR03314 L-glutamate 5-semialdehyde = (S)-1-pyrroline-5-carboxylic acid + H(2)O 1 LR 1 KEGG:R03314 KEGG reaction METACYC:SPONTPRO-RXN Rhea MetaCyc REACTION RHEA:28237 Rhea reaction 1 1 1 1 1 KEGG:R03348 METACYC:QUINOPRIBOTRANS-RXN RHEA:12736 reaction UPa:UCR03348 CO(2) + diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + quinolinate 1 RL 1 KEGG:R03348 KEGG reaction METACYC:QUINOPRIBOTRANS-RXN MetaCyc MetaCyc REACTION RHEA:12736 Rhea reaction 1 1 1 1 KEGG:R03350 METACYC:KDO-8PPHOSPHAT-RXN RHEA:11503 reaction UPa:UCR03350 8-phospho-3-deoxy-D-manno-octulosonate + H(2)O = 3-deoxy-D-manno-octulosonate + phosphate 1 LR 1 KEGG:R03350 KEGG reaction METACYC:KDO-8PPHOSPHAT-RXN MetaCyc MetaCyc REACTION RHEA:11503 Rhea reaction 1 1 1 1 KEGG:R03351 METACYC:CPM-KDOSYNTH-RXN RHEA:23451 reaction UPa:UCR03351 3-deoxy-D-manno-octulosonate + CTP = CMP-3-deoxy-D-manno-octulosonate + diphosphate 1 LR 1 KEGG:R03351 KEGG reaction METACYC:CPM-KDOSYNTH-RXN MetaCyc MetaCyc REACTION RHEA:23451 Rhea reaction 1 1 1 1 KEGG:R03387 METACYC:DEHYDDEOXGALACTKIN-RXN RHEA:16528 reaction UPa:UCR03387 2-dehydro-3-deoxy-D-galactonate + ATP = 6-phospho-2-dehydro-3-deoxy-D-galactonic acid + ADP 1 LR 1 KEGG:R03387 KEGG reaction METACYC:DEHYDDEOXGALACTKIN-RXN MetaCyc MetaCyc REACTION RHEA:16528 Rhea reaction 1 1 1 1 KEGG:R03390 METACYC:2.3.1.101-RXN RHEA:18064 reaction UPa:UCR03390 5,6,7,8-tetrahydromethanopterin + N-formylmethanofuran = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + methanofuran 1 1 LR 1 RL 1 KEGG:R03390 KEGG reaction METACYC:2.3.1.101-RXN MetaCyc MetaCyc REACTION RHEA:18064 Rhea reaction 1 1 1 1 1 1 KEGG:R03391 RHEA:19656 reaction UPa:UCR03391 CDP-4-dehydro-3,6-dideoxy-D-glucose + H(2)O + NAD(+) = CDP-4-dehydro-6-deoxy-D-glucose + H(+) + NADH 1 RL 1 KEGG:R03391 KEGG reaction RHEA:19656 Rhea reaction 1 1 1 1 1 1 KEGG:R03392 METACYC:1.17.1.1-RXN RHEA:19660 reaction UPa:UCR03392 CDP-4-dehydro-3,6-dideoxy-D-glucose + H(2)O + NADP(+) = CDP-4-dehydro-6-deoxy-D-glucose + H(+) + NADPH 1 RL 1 KEGG:R03392 KEGG reaction METACYC:1.17.1.1-RXN MetaCyc MetaCyc REACTION RHEA:19660 Rhea reaction 1 1 1 1 KEGG:R03409 METACYC:PPPGPPHYDRO-RXN RHEA:13076 reaction UPa:UCR03409 H(2)O + guanosine 3'-diphosphate 5'-triphosphate = phosphate + ppGpp 1 LR 1 KEGG:R03409 KEGG reaction METACYC:PPPGPPHYDRO-RXN MetaCyc MetaCyc REACTION RHEA:13076 Rhea reaction 1 1 1 1 KEGG:R03418 METACYC:2.4.1.67-RXN RHEA:20779 reaction UPa:UCR03418 1-alpha-D-galactosyl-myo-inositol + raffinose = myo-inositol + stachyose 1 LR 1 KEGG:R03418 KEGG reaction METACYC:2.4.1.67-RXN Rhea MetaCyc REACTION RHEA:20779 Rhea reaction 1 1 1 1 1 1 KEGG:R03443 METACYC:N-ACETYLGLUTPREDUCT-RXN RHEA:21591 reaction UPa:UCR03443 N-acetyl-L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + N-acetyl-L-glutamyl 5-phosphate + NADPH 1 RL 1 KEGG:R03443 KEGG reaction METACYC:N-ACETYLGLUTPREDUCT-RXN Rhea MetaCyc REACTION RHEA:21591 Rhea reaction 1 1 1 KEGG:R03444 METACYC:RXN3O-1983 RHEA:26104 reaction UPa:UCR03444 (R)-homocitrate = H(2)O + homo-cis-aconitate 1 LR 1 KEGG:R03444 KEGG reaction METACYC:RXN3O-1983 MetaCyc MetaCyc REACTION RHEA:26104 Rhea reaction 1 1 1 KEGG:R03445 METACYC:RXN-10720 RHEA:42455 reaction UPa:UCR03445 4-(2-aminophenyl)-2,4-dioxobutanoate = H(2)O + kynurenate 1 LR 1 KEGG:R03445 KEGG reaction METACYC:RXN-10720 MetaCyc MetaCyc REACTION RHEA:42455 Rhea reaction 1 1 1 KEGG:R03457 METACYC:IMIDPHOSDEHYD-RXN RHEA:11043 reaction UPa:UCR03457 D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = H(2)O + imidazole-acetol phosphate 1 LR 1 KEGG:R03457 KEGG reaction METACYC:IMIDPHOSDEHYD-RXN MetaCyc MetaCyc REACTION RHEA:11043 Rhea reaction 1 1 1 1 1 KEGG:R03458 METACYC:RIBOFLAVINSYNREDUC-RXN RHEA:17848 reaction UPa:UCR03458 5-amino-6-(5-phosphoribitylamino)uracil + NADP(+) = 5-amino-6-(5-phosphoribosylamino)uracil + H(+) + NADPH 1 RL 1 KEGG:R03458 KEGG reaction METACYC:RIBOFLAVINSYNREDUC-RXN MetaCyc MetaCyc REACTION RHEA:17848 Rhea reaction 1 1 1 1 KEGG:R03459 METACYC:RIBOFLAVINSYNDEAM-RXN RHEA:21871 reaction UPa:UCR03459 2,5-diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine + H(2)O = 5-amino-6-(5-phosphoribosylamino)uracil + NH(3) 1 LR 1 KEGG:R03459 KEGG reaction METACYC:RIBOFLAVINSYNDEAM-RXN MetaCyc MetaCyc REACTION RHEA:21871 Rhea reaction 1 1 1 1 KEGG:R03460 METACYC:2.5.1.19-RXN RHEA:21259 reaction UPa:UCR03460 3-phosphoshikimate + phosphoenolpyruvate = 5-O-(1-carboxyvinyl)-3-phosphoshikimate + phosphate 1 LR 1 KEGG:R03460 KEGG reaction METACYC:2.5.1.19-RXN Rhea MetaCyc REACTION RHEA:21259 Rhea reaction 1 1 1 KEGG:R03462 METACYC:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN RHEA:14416 reaction UPa:UCR03462 O(2) + biphenyl-2,3-diol = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate 1 LR 1 KEGG:R03462 KEGG reaction METACYC:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:14416 Rhea reaction 1 1 1 1 KEGG:R03464 METACYC:3.5.4.27-RXN RHEA:19056 reaction UPa:UCR03464 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2)O = H(+) + N(5)-formyl-5,6,7,8-tetrahydromethanopterin 1 1 RL 1 LR 1 KEGG:R03464 KEGG reaction METACYC:3.5.4.27-RXN Rhea MetaCyc REACTION RHEA:19056 Rhea reaction 1 1 1 KEGG:R03470 METACYC:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN RHEA:23351 reaction UPa:UCR03470 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 5-oxo-4,5-dihydro-2-furylacetate + CO(2) 1 LR 1 KEGG:R03470 KEGG reaction METACYC:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:23351 Rhea reaction 1 1 1 1 KEGG:R03471 METACYC:OHMETPYRKIN-RXN RHEA:23099 reaction UPa:UCR03471 4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-methyl-5-phosphomethylpyrimidine + ADP 1 LR 1 KEGG:R03471 KEGG reaction METACYC:OHMETPYRKIN-RXN Rhea MetaCyc REACTION RHEA:23099 Rhea reaction 1 1 1 1 KEGG:R03503 METACYC:H2PTERIDINEPYROPHOSPHOKIN-RXN RHEA:11415 reaction UPa:UCR03503 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + AMP 1 LR 1 KEGG:R03503 KEGG reaction METACYC:H2PTERIDINEPYROPHOSPHOKIN-RXN Rhea MetaCyc REACTION RHEA:11415 Rhea reaction 1 1 1 KEGG:R03504 METACYC:H2NEOPTERINALDOL-RXN RHEA:10543 reaction UPa:UCR03504 7,8-dihydroneopterin = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde 1 LR 1 KEGG:R03504 KEGG reaction METACYC:H2NEOPTERINALDOL-RXN MetaCyc MetaCyc REACTION RHEA:10543 Rhea reaction 1 1 1 1 KEGG:R03508 METACYC:IGPSYN-RXN RHEA:23479 reaction UPa:UCR03508 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = CO(2) + H(2)O + indoleglycerol phosphate 1 LR 1 KEGG:R03508 KEGG reaction METACYC:IGPSYN-RXN MetaCyc MetaCyc REACTION RHEA:23479 Rhea reaction 1 1 KEGG:R03509 METACYC:PRAISOM-RXN RHEA:21543 reaction UPa:UCR03509 N-(5-phospho-beta-D-ribosyl)anthranilic acid = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate 1 LR 1 KEGG:R03509 KEGG reaction METACYC:PRAISOM-RXN MetaCyc MetaCyc REACTION RHEA:21543 Rhea reaction 1 1 1 1 KEGG:R03534 METACYC:2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN RHEA:21255 RHEA:25264 reaction UPa:UCR03534 2-hydroxyglutarate + FAD = 2-oxoglutarate + FADH2 1 RL 1 KEGG:R03534 KEGG reaction METACYC:2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN MetaCyc Rhea MetaCyc REACTION RHEA:21255 Rhea reaction RHEA:25264 Rhea reaction 1 1 1 1 1 1 KEGG:R03543 METACYC:BENZENE-12-DIOXYGENASE-RXN RHEA:13816 reaction UPa:UCR03543 H(+) + NADH + O(2) + benzene = NAD(+) + cis-1,2-dihydrobenzene-1,2-diol 1 LR 1 KEGG:R03543 KEGG reaction METACYC:BENZENE-12-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:13816 Rhea reaction 1 1 1 1 1 1 KEGG:R03559 METACYC:TOLUENE-DIOXYGENASE-RXN RHEA:16740 reaction UPa:UCR03559 H(+) + NADH + O(2) + toluene = (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD(+) 1 LR 1 KEGG:R03559 KEGG reaction METACYC:TOLUENE-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:16740 Rhea reaction 1 1 1 1 1 1 KEGG:R03630 METACYC:PHTHALATE-45-DIOXYGENASE-RXN RHEA:17492 reaction UPa:UCR03630 H(+) + NADH + O(2) + phthalate = NAD(+) + cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylic acid 1 LR 1 KEGG:R03630 KEGG reaction METACYC:PHTHALATE-45-DIOXYGENASE-RXN Rhea MetaCyc REACTION RHEA:17492 Rhea reaction 1 1 1 KEGG:R03693 METACYC:S-2-METHYLMALATE-DEHYDRATASE-RXN RHEA:13532 reaction UPa:UCR03693 L-citramalate = H(2)O + mesaconate 1 RL 1 KEGG:R03693 KEGG reaction METACYC:S-2-METHYLMALATE-DEHYDRATASE-RXN Rhea MetaCyc REACTION RHEA:13532 Rhea reaction 1 1 1 KEGG:R03696 METACYC:METHYLASPARTATE-AMMONIA-LYASE-RXN RHEA:12832 reaction UPa:UCR03696 (2S,3S)-3-methyl-L-aspartate = NH(3) + mesaconate 1 LR 1 KEGG:R03696 KEGG reaction METACYC:METHYLASPARTATE-AMMONIA-LYASE-RXN Rhea MetaCyc REACTION RHEA:12832 Rhea reaction 1 1 1 1 KEGG:R03721 METACYC:2.1.1.118-RXN RHEA:15376 reaction UPa:UCR03721 S-adenosyl-L-methionine + columbamine = S-adenosyl-L-homocysteine + palmatine 1 LR 1 KEGG:R03721 KEGG reaction METACYC:2.1.1.118-RXN MetaCyc MetaCyc REACTION RHEA:15376 Rhea reaction 1 1 1 1 KEGG:R03738 METACYC:STRICTOSIDINE-SYNTHASE-RXN RHEA:15016 reaction UPa:UCR03738 3alpha(S)-strictosidine + H(2)O = secologanin + tryptamine 1 RL 1 KEGG:R03738 KEGG reaction METACYC:STRICTOSIDINE-SYNTHASE-RXN MetaCyc MetaCyc REACTION RHEA:15016 Rhea reaction 1 1 KEGG:R03791 METACYC:MANDELATE-RACEMASE-RXN RHEA:13948 reaction UPa:UCR03791 (S)-mandelate = (R)-mandelate 1 RL 1 KEGG:R03791 KEGG reaction METACYC:MANDELATE-RACEMASE-RXN MetaCyc MetaCyc REACTION RHEA:13948 Rhea reaction 1 1 1 1 KEGG:R03793 METACYC:MANDELATE-DEHYDROGENASE-RXN RHEA:15752 reaction UPa:UCR03793 (S)-mandelate + acceptor = phenylglyoxylate + reduced acceptor 1 LR 1 KEGG:R03793 KEGG reaction METACYC:MANDELATE-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:15752 Rhea reaction 1 1 1 1 KEGG:R03831 METACYC:RETICULINE-OXIDASE-RXN RHEA:19888 reaction UPa:UCR03831 (S)-reticuline + O(2) = (S)-scoulerine + H(2)O(2) 1 LR 1 KEGG:R03831 KEGG reaction METACYC:RETICULINE-OXIDASE-RXN MetaCyc MetaCyc REACTION RHEA:19888 Rhea reaction 1 1 1 1 1 KEGG:R03832 METACYC:2.1.1.116-RXN RHEA:17792 reaction UPa:UCR03832 (S)-3'-hydroxy-N-methylcoclaurine + S-adenosyl-L-methionine = (S)-reticuline + H(+) + S-adenosyl-L-homocysteine 1 LR 1 KEGG:R03832 KEGG reaction METACYC:2.1.1.116-RXN MetaCyc MetaCyc REACTION RHEA:17792 Rhea reaction 1 1 KEGG:R03892 METACYC:RXN-9922 RHEA:42435 reaction UPa:UCR03892 maleylacetate = 3-hydroxy-cis,cis-muconate 1 RL 1 KEGG:R03892 KEGG reaction METACYC:RXN-9922 MetaCyc MetaCyc REACTION RHEA:42435 Rhea reaction 1 1 1 KEGG:R03896 METACYC:R-2-METHYLMALATE-DEHYDRATASE-RXN RHEA:22335 reaction UPa:UCR03896 (R)-citramalate = 2-methylmaleate + H(2)O 1 LR 1 KEGG:R03896 KEGG reaction METACYC:R-2-METHYLMALATE-DEHYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:22335 Rhea reaction 1 1 1 KEGG:R03898 RHEA:42427 reaction UPa:UCR03898 2-methylmaleate + H(2)O = D-erythro-3-methylmalic acid 1 LR 2 KEGG:R03898 KEGG reaction RHEA:42427 Rhea reaction 1 1 KEGG:R03908 METACYC:2-METHYLENEGLUTARATE-MUTASE-RXN RHEA:13796 reaction UPa:UCR03908 2-methyleneglutarate = 2-methylene-3-methylsuccinate 1 LR 1 KEGG:R03908 KEGG reaction METACYC:2-METHYLENEGLUTARATE-MUTASE-RXN MetaCyc MetaCyc REACTION RHEA:13796 Rhea reaction 1 1 1 1 1 1 KEGG:R03932 METACYC:6.2.1.33-RXN RHEA:23223 reaction UPa:UCR03932 4-chlorobenzoate + ATP + CoA = 4-chlorobenzoyl-CoA + AMP + diphosphate 1 LR 1 KEGG:R03932 KEGG reaction METACYC:6.2.1.33-RXN MetaCyc MetaCyc REACTION RHEA:23223 Rhea reaction 1 1 1 KEGG:R03937 METACYC:RXN-1083 RHEA:42451 reaction UPa:UCR03937 H(2)O + glutaconyl-1-CoA = 2-hydroxyglutaryl-CoA 1 RL 1 KEGG:R03937 KEGG reaction METACYC:RXN-1083 MetaCyc MetaCyc REACTION RHEA:42451 Rhea reaction 1 1 1 1 1 KEGG:R03947 METACYC:DIMETHUROPORDEHYDROG-RXN RHEA:15616 reaction UPa:UCR03947 NAD(+) + precorrin-2 = H(+) + NADH + sirohydrochlorin 1 LR 1 KEGG:R03947 KEGG reaction METACYC:DIMETHUROPORDEHYDROG-RXN Rhea MetaCyc REACTION RHEA:15616 Rhea reaction 1 1 1 1 1 KEGG:R03948 METACYC:2.1.1.130-RXN RHEA:16844 reaction UPa:UCR03948 S-adenosyl-L-methionine + precorrin-2 = H(+) + S-adenosyl-L-homocysteine + precorrin-3A 1 LR 1 KEGG:R03948 KEGG reaction METACYC:2.1.1.130-RXN Rhea MetaCyc REACTION RHEA:16844 Rhea reaction 1 1 1 KEGG:R03968 METACYC:3-ISOPROPYLMALISOM-RXN RHEA:16296 reaction UPa:UCR03968 (2S)-2-isopropylmalate = 2-isopropylmaleate + H(2)O 1 LR 1 KEGG:R03968 KEGG reaction METACYC:3-ISOPROPYLMALISOM-RXN Rhea MetaCyc REACTION RHEA:16296 Rhea reaction 1 1 1 1 KEGG:R04000 METACYC:RXN-1082 RHEA:42079 reaction UPa:UCR04000 2-hydroxyglutarate + acetyl-CoA = 2-hydroxyglutaryl-CoA + acetate 1 LR 1 KEGG:R04000 KEGG reaction METACYC:RXN-1082 MetaCyc MetaCyc REACTION RHEA:42079 Rhea reaction 1 1 1 KEGG:R04001 METACYC:RXN-8991 RHEA:10679 reaction UPa:UCR04001 (2R,3S)-3-isopropylmalate = 2-isopropylmaleate + H(2)O 1 RL 2 KEGG:R04001 KEGG reaction METACYC:RXN-8991 MetaCyc MetaCyc REACTION RHEA:10679 Rhea reaction 1 1 1 1 KEGG:R04013 METACYC:2.1.1.99-RXN RHEA:11339 reaction UPa:UCR04013 3-hydroxy-16-methoxy-2,3-dihydrotabersonine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + desacetoxyvindoline 1 LR 1 KEGG:R04013 KEGG reaction METACYC:2.1.1.99-RXN MetaCyc MetaCyc REACTION RHEA:11339 Rhea reaction 1 1 1 1 KEGG:R04029 METACYC:ACETCAPR-RXN RHEA:42507 reaction UPa:UCR04029 2-oxoglutarate + N(6)-acetyl-L-lysine = 6-acetamido-2-oxohexanoate + L-glutamate 1 LR 1 KEGG:R04029 KEGG reaction METACYC:ACETCAPR-RXN Rhea MetaCyc REACTION RHEA:42507 Rhea reaction 1 1 1 1 1 1 KEGG:R04030 METACYC:O-SUCCINYLBENZOATE-COA-LIG-RXN RHEA:17012 reaction UPa:UCR04030 2-succinylbenzoate + ATP + CoA = 2-succinylbenzoyl-CoA + AMP + diphosphate 1 LR 1 KEGG:R04030 KEGG reaction METACYC:O-SUCCINYLBENZOATE-COA-LIG-RXN MetaCyc MetaCyc REACTION RHEA:17012 Rhea reaction 1 1 1 KEGG:R04031 METACYC:O-SUCCINYLBENZOATE-COA-SYN-RXN RHEA:10199 reaction UPa:UCR04031 2-succinylbenzoate + H(2)O = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylic acid 1 RL 1 KEGG:R04031 KEGG reaction METACYC:O-SUCCINYLBENZOATE-COA-SYN-RXN MetaCyc MetaCyc REACTION RHEA:10199 Rhea reaction 1 1 1 1 KEGG:R04035 METACYC:HISTPRATPHYD-RXN RHEA:22831 reaction UPa:UCR04035 1-(5-phospho-D-ribosyl)-ATP + H(2)O = 1-(5-phosphoribosyl)-5'-AMP + diphosphate 1 LR 1 KEGG:R04035 KEGG reaction METACYC:HISTPRATPHYD-RXN MetaCyc MetaCyc REACTION RHEA:22831 Rhea reaction 1 1 1 KEGG:R04037 METACYC:HISTCYCLOHYD-RXN RHEA:20052 reaction UPa:UCR04037 1-(5-phosphoribosyl)-5'-AMP + H(2)O = 5-(5-phospho-D-ribosylaminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide 1 LR 1 KEGG:R04037 KEGG reaction METACYC:HISTCYCLOHYD-RXN MetaCyc MetaCyc REACTION RHEA:20052 Rhea reaction 1 1 1 KEGG:R04061 METACYC:RXN-10137 RHEA:19444 reaction UPa:UCR04061 O(2) + benzene-1,2,4-triol = 3-hydroxy-cis,cis-muconate 1 LR 1 KEGG:R04061 KEGG reaction METACYC:RXN-10137 MetaCyc MetaCyc REACTION RHEA:19444 Rhea reaction 1 1 1 1 1 KEGG:R04088 METACYC:TOLUENE-DIOL-DEHYDROGENASE-RXN RHEA:25196 reaction UPa:UCR04088 (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD(+) = 3-methylcatechol + H(+) + NADH 1 LR 1 KEGG:R04088 KEGG reaction METACYC:TOLUENE-DIOL-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:25196 Rhea reaction 1 1 1 1 KEGG:R04095 METACYC:RXN-14264 RHEA:31066 reaction UPa:UCR04095 3-isovaleryl-CoA + FAD = 3-methylcrotonyl-CoA + FADH2 1 LR 1 KEGG:R04095 KEGG reaction METACYC:RXN-14264 Rhea MetaCyc REACTION RHEA:31066 Rhea reaction 1 1 1 1 1 KEGG:R04101 METACYC:3.8.1.7-RXN RHEA:14856 reaction UPa:UCR04101 4-chlorobenzoyl-CoA + H(2)O = 4-hydroxybenzoyl-CoA + H(+) + chloride 1 LR 1 KEGG:R04101 KEGG reaction METACYC:3.8.1.7-RXN MetaCyc MetaCyc REACTION RHEA:14856 Rhea reaction 1 1 1 1 1 1 KEGG:R04109 METACYC:GLUTRNAREDUCT-RXN RHEA:12347 reaction UPa:UCR04109 H(+) + L-glutamyl-tRNA(Glu) + NADPH = (S)-4-amino-5-oxopentanoic acid + NADP(+) + tRNA(Glu) 1 LR 1 KEGG:R04109 KEGG reaction METACYC:GLUTRNAREDUCT-RXN MetaCyc MetaCyc REACTION RHEA:12347 Rhea reaction 1 1 1 1 1 1 KEGG:R04138 METACYC:METHYLCROTONYL-COA-CARBOXYLASE-RXN RHEA:13592 reaction UPa:UCR04138 3-methylcrotonyl-CoA + ATP + bicarbonate = 3-methylglutaconyl-CoA + ADP + phosphate 1 LR 1 KEGG:R04138 KEGG reaction METACYC:METHYLCROTONYL-COA-CARBOXYLASE-RXN MetaCyc MetaCyc REACTION RHEA:13592 Rhea reaction 1 1 1 1 1 1 1 KEGG:R04142 METACYC:KETAMID-RXN RHEA:42511 reaction UPa:UCR04142 5-acetamidopentanoate + CO(2) + H(+) + NADH = 6-acetamido-2-oxohexanoate + H(2)O + NAD(+) 1 RL 1 KEGG:R04142 KEGG reaction METACYC:KETAMID-RXN MetaCyc MetaCyc REACTION RHEA:42511 Rhea reaction 1 1 1 1 KEGG:R04143 METACYC:5-METHYLTHIORIBOSE-KINASE-RXN RHEA:22315 reaction UPa:UCR04143 5-methylthio-alpha-D-ribose + ATP = ADP + S-methyl-5-thio-alpha-D-ribose 1-phosphate 1 LR 1 KEGG:R04143 KEGG reaction METACYC:5-METHYLTHIORIBOSE-KINASE-RXN MetaCyc MetaCyc REACTION RHEA:22315 Rhea reaction 1 1 1 1 1 1 KEGG:R04144 METACYC:GLYRIBONUCSYN-RXN RHEA:17456 reaction UPa:UCR04144 5-phospho-beta-D-ribosylamine + ATP + glycine = ADP + N(1)-(5-phospho-D-ribosyl)glycinamide + phosphate 1 LR 1 KEGG:R04144 KEGG reaction METACYC:GLYRIBONUCSYN-RXN Rhea MetaCyc REACTION RHEA:17456 Rhea reaction 1 1 1 1 1 KEGG:R04148 METACYC:DMBPPRIBOSYLTRANS-RXN RHEA:11199 reaction UPa:UCR04148 5,6-dimethylbenzimidazole + nicotinate D-ribonucleotide = H(+) + alpha-ribazole 5'-phosphate + nicotinate 1 LR 1 KEGG:R04148 KEGG reaction METACYC:DMBPPRIBOSYLTRANS-RXN MetaCyc MetaCyc REACTION RHEA:11199 Rhea reaction 1 1 1 1 KEGG:R04173 METACYC:PSERTRANSAM-RXN RHEA:14332 reaction UPa:UCR04173 2-oxoglutarate + O-phospho-L-serine = 3-phosphohydroxypyruvate + L-glutamate 1 RL 1 KEGG:R04173 KEGG reaction METACYC:PSERTRANSAM-RXN Rhea MetaCyc REACTION RHEA:14332 Rhea reaction 1 1 1 1 1 KEGG:R04189 METACYC:SUCCARGDIHYDRO-RXN RHEA:19536 reaction UPa:UCR04189 2 H(2)O + N(2)-succinyl-L-arginine = CO(2) + N(2)-succinyl-L-ornithine + 2 NH(3) 1 LR 1 KEGG:R04189 KEGG reaction METACYC:SUCCARGDIHYDRO-RXN MetaCyc MetaCyc REACTION RHEA:19536 Rhea reaction 1 1 1 1 1 1 KEGG:R04198 RHEA:35326 reaction UPa:UCR04198 (S)-tetrahydrodipicolinate + H(2)O + NAD(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADH 1 RL 1 KEGG:R04198 KEGG reaction RHEA:35326 Rhea reaction 1 1 1 1 1 1 KEGG:R04199 RHEA:35334 reaction UPa:UCR04199 (S)-tetrahydrodipicolinate + H(2)O + NADP(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADPH 1 RL 1 KEGG:R04199 KEGG reaction RHEA:35334 Rhea reaction 1 1 1 1 1 KEGG:R04208 METACYC:AIRS-RXN RHEA:23035 reaction UPa:UCR04208 2-formamido-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + phosphate 1 LR 1 KEGG:R04208 KEGG reaction METACYC:AIRS-RXN MetaCyc MetaCyc REACTION RHEA:23035 Rhea reaction 1 1 1 KEGG:R04209 METACYC:AIRCARBOXY-RXN RHEA:10795 reaction UPa:UCR04209 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO(2) 1 RL 1 KEGG:R04209 KEGG reaction METACYC:AIRCARBOXY-RXN Rhea MetaCyc REACTION RHEA:10795 Rhea reaction 1 1 1 1 1 KEGG:R04210 METACYC:ERYTHRON4PDEHYDROG-RXN RHEA:18832 reaction UPa:UCR04210 4-phospho-D-erythronate + NAD(+) = (R)-3-hydroxy-2-oxo-4-phosphonooxybutanoic acid + H(+) + NADH 1 LR 1 KEGG:R04210 KEGG reaction METACYC:ERYTHRON4PDEHYDROG-RXN MetaCyc MetaCyc REACTION RHEA:18832 Rhea reaction 1 1 1 1 KEGG:R04217 METACYC:SUCCORNTRANSAM-RXN RHEA:16956 reaction UPa:UCR04217 2-oxoglutarate + N(2)-succinyl-L-ornithine = L-glutamate + N-succinyl-L-glutamate 5-semialdehyde 1 LR 1 KEGG:R04217 KEGG reaction METACYC:SUCCORNTRANSAM-RXN MetaCyc MetaCyc REACTION RHEA:16956 Rhea reaction 1 1 1 KEGG:R04218 RHEA:34482 reaction UPa:UCR04218 prephytoene diphosphate = 15-cis-phytoene + diphosphate 1 LR 2 KEGG:R04218 KEGG reaction RHEA:34482 Rhea reaction 1 1 1 1 1 1 KEGG:R04231 METACYC:P-PANTOCYSLIG-RXN RHEA:19400 reaction UPa:UCR04231 (R)-4'-phosphopantothenate + CTP + L-cysteine = CMP + N-[(R)-4-phosphonopantothenoyl]-L-cysteine + diphosphate 1 LR 1 KEGG:R04231 KEGG reaction METACYC:P-PANTOCYSLIG-RXN MetaCyc MetaCyc REACTION RHEA:19400 Rhea reaction 1 1 1 1 1 KEGG:R04265 METACYC:RXN-9159 RHEA:34570 reaction UPa:UCR04265 CDP-3,6-dideoxy-D-glucose + NADP(+) = CDP-4-dehydro-3,6-dideoxy-D-glucose + H(+) + NADPH 1 RL 1 KEGG:R04265 KEGG reaction METACYC:RXN-9159 MetaCyc MetaCyc REACTION RHEA:34570 Rhea reaction 1 1 KEGG:R04266 METACYC:RXN-9160 RHEA:21659 reaction UPa:UCR04266 CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose 1 LR 1 KEGG:R04266 KEGG reaction METACYC:RXN-9160 MetaCyc MetaCyc REACTION RHEA:21659 Rhea reaction 1 1 1 1 1 KEGG:R04285 METACYC:1.1.1.220-RXN RHEA:11775 reaction UPa:UCR04285 6-lactoyl-5,6,7,8-tetrahydropterin + NADP(+) = 6-pyruvoyl-tetrahydropterin + H(+) + NADPH 1 RL 1 KEGG:R04285 KEGG reaction METACYC:1.1.1.220-RXN MetaCyc MetaCyc REACTION RHEA:11775 Rhea reaction 1 1 1 KEGG:R04286 METACYC:4.2.3.12-RXN RHEA:22051 reaction UPa:UCR04286 7,8-dihydroneopterin triphosphate = 6-pyruvoyl-tetrahydropterin + triphosphate 1 LR 1 KEGG:R04286 KEGG reaction METACYC:4.2.3.12-RXN MetaCyc MetaCyc REACTION RHEA:22051 Rhea reaction 1 1 1 1 1 KEGG:R04292 METACYC:QUINOLINATE-SYNTHA-RXN RHEA:25891 reaction UPa:UCR04292 2 H(2)O + phosphate + quinolinate = glycerone phosphate + iminoaspartate 1 RL 1 KEGG:R04292 KEGG reaction METACYC:QUINOLINATE-SYNTHA-RXN MetaCyc MetaCyc REACTION RHEA:25891 Rhea reaction 1 1 1 KEGG:R04293 METACYC:RXN-5721 RHEA:25150 reaction UPa:UCR04293 H(2)O + quinolinate = 2-amino-3-carboxymuconate semialdehyde 1 RL 2 KEGG:R04293 KEGG reaction METACYC:RXN-5721 MetaCyc MetaCyc REACTION RHEA:25150 Rhea reaction 1 1 1 1 KEGG:R04296 METACYC:RXN-743 RHEA:12856 reaction UPa:UCR04296 (S)-4-hydroxymandelonitrile + UDP-alpha-D-glucose = UDP + dhurrin 1 LR 1 KEGG:R04296 KEGG reaction METACYC:RXN-743 Rhea MetaCyc REACTION RHEA:12856 Rhea reaction 1 1 1 1 KEGG:R04325 METACYC:GART-RXN RHEA:15056 reaction UPa:UCR04325 10-formyl-5,6,7,8-tetrahydrofolate + N(1)-(5-phospho-D-ribosyl)glycinamide = 5,6,7,8-tetrahydrofolate + N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide 1 LR 1 KEGG:R04325 KEGG reaction METACYC:GART-RXN Rhea MetaCyc REACTION RHEA:15056 Rhea reaction 1 1 1 KEGG:R04336 METACYC:RXN-4821 RHEA:24800 reaction UPa:UCR04336 (S)-2-amino-6-oxopimelate = (S)-tetrahydrodipicolinate + H(2)O 1 RL 1 KEGG:R04336 KEGG reaction METACYC:RXN-4821 MetaCyc MetaCyc REACTION RHEA:24800 Rhea reaction 1 1 1 1 KEGG:R04347 METACYC:2.1.1.86-RXN RHEA:17588 reaction UPa:UCR04347 5-methyl-5,6,7,8-tetrahydromethanopterin + coenzyme M = 5,6,7,8-tetrahydromethanopterin + methyl-coenzyme M 1 LR 1 KEGG:R04347 KEGG reaction METACYC:2.1.1.86-RXN Rhea MetaCyc REACTION RHEA:17588 Rhea reaction 1 1 1 1 1 KEGG:R04364 METACYC:2.3.1.89-RXN RHEA:13088 reaction UPa:UCR04364 (S)-tetrahydrodipicolinate + H(2)O + acetyl-CoA = (S)-2-acetamido-6-oxopimelate + CoA 1 LR 1 KEGG:R04364 KEGG reaction METACYC:2.3.1.89-RXN MetaCyc MetaCyc REACTION RHEA:13088 Rhea reaction 1 1 1 1 1 KEGG:R04365 METACYC:TETHYDPICSUCC-RXN RHEA:17328 reaction UPa:UCR04365 (S)-tetrahydrodipicolinate + H(2)O + succinyl-CoA = CoA + L-2-succinylamino-6-oxopimelate 1 LR 1 KEGG:R04365 KEGG reaction METACYC:TETHYDPICSUCC-RXN Rhea MetaCyc REACTION RHEA:17328 Rhea reaction 1 1 1 KEGG:R04371 METACYC:HOMOACONITATE-HYDRATASE-RXN RHEA:15488 reaction UPa:UCR04371 homoisocitrate = H(2)O + homo-cis-aconitate 1 RL 1 KEGG:R04371 KEGG reaction METACYC:HOMOACONITATE-HYDRATASE-RXN MetaCyc MetaCyc REACTION RHEA:15488 Rhea reaction 1 1 1 KEGG:R04376 METACYC:1.13.11.16-RXN RHEA:23843 reaction UPa:UCR04376 3-(2,3-dihydroxyphenyl)propanoate + O(2) = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate 1 LR 1 KEGG:R04376 KEGG reaction METACYC:1.13.11.16-RXN MetaCyc MetaCyc REACTION RHEA:23843 Rhea reaction 1 1 KEGG:R04379 METACYC:5.3.3.10-RXN RHEA:18816 reaction UPa:UCR04379 5-carboxymethyl-2-hydroxymuconic acid = 5-oxopent-3-ene-1,2,5-tricarboxylic acid 1 LR 1 KEGG:R04379 KEGG reaction METACYC:5.3.3.10-RXN MetaCyc MetaCyc REACTION RHEA:18816 Rhea reaction 1 1 1 KEGG:R04380 METACYC:CARBOXY-OXOHEPT-ENEDIOATE-DECARBOXY-RXN reaction UPa:UCR04380 5-oxopent-3-ene-1,2,5-tricarboxylic acid = 2-hydroxy-hept-2,4-diene-1,7-dioic acid + CO(2) 1 LR 1 KEGG:R04380 KEGG reaction METACYC:CARBOXY-OXOHEPT-ENEDIOATE-DECARBOXY-RXN MetaCyc MetaCyc REACTION 1 1 KEGG:R04382 METACYC:OLIGOGALACTURONIDE-LYASE-RXN RHEA:20272 reaction UPa:UCR04382 4-(4-deoxy-alpha-D-gluc-4-enosyluronic acid)-D-galacturonic acid = 2 5-dehydro-4-deoxy-D-glucuronic acid 1 LR 1 KEGG:R04382 KEGG reaction METACYC:OLIGOGALACTURONIDE-LYASE-RXN MetaCyc Rhea MetaCyc REACTION RHEA:20272 Rhea reaction 1 1 KEGG:R04383 METACYC:5.3.1.17-RXN RHEA:23899 reaction UPa:UCR04383 5-dehydro-4-deoxy-D-glucuronic acid = 3-deoxy-D-glycero-hexo-2,5-diulosonate 1 LR 1 KEGG:R04383 KEGG reaction METACYC:5.3.1.17-RXN Rhea MetaCyc REACTION RHEA:23899 Rhea reaction 1 1 1 1 1 1 KEGG:R04390 reaction UPa:UCR04390 H(+) + NADPH + alpha-aminoadipoyl-S-acyl enzyme = L-2-aminoadipate 6-semialdahyde + NADP(+) + holo-Lys2 1 LR 3 KEGG:R04390 KEGG reaction 1 1 1 1 KEGG:R04393 RHEA:42403 reaction UPa:UCR04393 lactose + protein N(pi)-phospho-L-histidine = lactose 6-phosphate + protein-L-histidine 1 LR 1 KEGG:R04393 KEGG reaction RHEA:42403 Rhea reaction 1 1 1 1 KEGG:R04405 METACYC:HOMOCYSMET-RXN RHEA:21199 reaction UPa:UCR04405 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate 1 LR 1 KEGG:R04405 KEGG reaction METACYC:HOMOCYSMET-RXN Rhea MetaCyc REACTION RHEA:21199 Rhea reaction 1 1 1 1 1 1 KEGG:R04418 METACYC:CHMS-DEHYDROGENASE-RXN RHEA:15684 reaction UPa:UCR04418 5-carboxymethyl-2-hydroxymuconate semialdehyde + H(2)O + NAD(+) = 5-carboxymethyl-2-hydroxymuconic acid + H(+) + NADH 1 LR 1 KEGG:R04418 KEGG reaction METACYC:CHMS-DEHYDROGENASE-RXN MetaCyc MetaCyc REACTION RHEA:15684 Rhea reaction 1 1 KEGG:R04420 METACYC:5.3.1.23-RXN RHEA:19992 reaction UPa:UCR04420 S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate 1 LR 1 KEGG:R04420 KEGG reaction METACYC:5.3.1.23-RXN MetaCyc MetaCyc REACTION RHEA:19992 Rhea reaction 1 1 1 1 1 KEGG:R04426 METACYC:3-ISOPROPYLMALDEHYDROG-RXN RHEA:10895 reaction UPa:UCR04426 (2R,3S)-3-isopropylmalate + NAD(+) = 3-carboxy-4-methyl-2-oxopentanoate + H(+) + NADH 1 LR 1 KEGG:R04426 KEGG reaction METACYC:3-ISOPROPYLMALDEHYDROG-RXN Rhea MetaCyc REACTION RHEA:10895 Rhea reaction 1 1 1 1 KEGG:R04427 METACYC:RXN3O-178 RHEA:21131 reaction UPa:UCR04427 S-adenosyl-L-methionine + zymosterol = S-adenosyl-L-homocysteine + fecosterol 1 LR 1 KEGG:R04427 KEGG reaction METACYC:RXN3O-178 MetaCyc MetaCyc REACTION RHEA:21131 Rhea reaction 1 1 1 1 1 KEGG:R04440 RHEA:31142 reaction UPa:UCR04440 (R)-2,3-dihydroxy-3-methylbutanoate + NADP(+) = 2-oxo-3-hydroxyisovalerate + H(+) + NADPH 1 RL 2 KEGG:R04440 KEGG reaction RHEA:31142 Rhea reaction 1 1 1 KEGG:R04441 METACYC:DIHYDROXYISOVALDEHYDRAT-RXN RHEA:24812 reaction UPa:UCR04441 (R)-2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H(2)O 1 LR 1 KEGG:R04441 KEGG reaction METACYC:DIHYDROXYISOVALDEHYDRAT-RXN MetaCyc MetaCyc REACTION RHEA:24812 Rhea reaction 1 1 1 1 KEGG:R04448 METACYC:THIAZOLSYN3-RXN RHEA:24215 reaction UPa:UCR04448 5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphoethyl)-thiazole + ADP 1 LR 1 KEGG:R04448 KEGG reaction METACYC:THIAZOLSYN3-RXN MetaCyc MetaCyc REACTION RHEA:24215 Rhea reaction 1 1 1 1 KEGG:R04455 METACYC:H2-METHYLENE-THMPT-DEHYDRO-RXN RHEA:20020 reaction UPa:UCR04455 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2) = 5,10-methylene-5,6,7,8-tetrahydromethanopterin + H(+) 1 LR 1 KEGG:R04455 KEGG reaction METACYC:H2-METHYLENE-THMPT-DEHYDRO-RXN Rhea MetaCyc REACTION RHEA:20020 Rhea reaction 1 1 1 1 KEGG:R04456 METACYC:1.5.99.9-RXN RHEA:16724 reaction UPa:UCR04456 5,10-methylene-5,6,7,8-tetrahydromethanopterin + coenzyme F420 = 1,5-dihydro-coenzyme F(420) + 5,10-methenyl-5,6,7,8-tetrahydromethanopterin 1 RL 1 KEGG:R04456 KEGG reaction METACYC:1.5.99.9-RXN Rhea MetaCyc REACTION RHEA:16724 Rhea reaction 1 1 1 1 1 KEGG:R04457 METACYC:LUMAZINESYN-RXN RHEA:26155 reaction UPa:UCR04457 2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + 2 H(2)O + phosphate 1 LR 1 KEGG:R04457 KEGG reaction METACYC:LUMAZINESYN-RXN MetaCyc Rhea MetaCyc REACTION RHEA:26155 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R04463 METACYC:FGAMSYN-RXN RHEA:17132 reaction UPa:UCR04463 ATP + H(2)O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-phospho-D-ribosyl)acetamidine + ADP + L-glutamate + phosphate 1 LR 1 KEGG:R04463 KEGG reaction METACYC:FGAMSYN-RXN Rhea MetaCyc REACTION RHEA:17132 Rhea reaction 1 1 1 1 KEGG:R04464 METACYC:METHELENE-THMPT-OXI-RXN RHEA:21147 reaction UPa:UCR04464 1,5-dihydro-coenzyme F(420) + 5,10-methylene-5,6,7,8-tetrahydromethanopterin = 5-methyl-5,6,7,8-tetrahydromethanopterin + coenzyme F420 1 LR 1 KEGG:R04464 KEGG reaction METACYC:METHELENE-THMPT-OXI-RXN Rhea MetaCyc REACTION RHEA:21147 Rhea reaction 1 1 1 1 KEGG:R04467 METACYC:RXN-4822 RHEA:25318 reaction UPa:UCR04467 2-oxoglutarate + N-acetyl-LL-2,6-diaminopimelate = (S)-2-acetamido-6-oxopimelate + L-glutamate 1 RL 1 KEGG:R04467 KEGG reaction METACYC:RXN-4822 MetaCyc MetaCyc REACTION RHEA:25318 Rhea reaction 1 1 1 1 KEGG:R04475 METACYC:SUCCINYLDIAMINOPIMTRANS-RXN RHEA:11963 reaction UPa:UCR04475 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate 1 RL 1 KEGG:R04475 KEGG reaction METACYC:SUCCINYLDIAMINOPIMTRANS-RXN Rhea MetaCyc REACTION RHEA:11963 Rhea reaction 1 1 1 1 KEGG:R04509 METACYC:PYRIMSYN3-RXN RHEA:19896 reaction UPa:UCR04509 4-amino-2-methyl-5-phosphomethylpyrimidine + ATP = 4-amino-2-methyl-5-diphosphomethylpyrimidine + ADP 1 LR 1 KEGG:R04509 KEGG reaction METACYC:PYRIMSYN3-RXN MetaCyc MetaCyc REACTION RHEA:19896 Rhea reaction 1 1 1 1 1 KEGG:R04540 METACYC:1.8.98.1-RXN RHEA:18088 reaction UPa:UCR04540 coenzyme M-coenzyme B heterodisulfide + dihydromethanophenazine = coenzyme B + coenzyme M + methanophenazine 1 LR 1 KEGG:R04540 KEGG reaction METACYC:1.8.98.1-RXN Rhea MetaCyc REACTION RHEA:18088 Rhea reaction 1 1 1 1 KEGG:R04541 METACYC:METHYL-COM-HTP-RXN RHEA:12535 reaction UPa:UCR04541 coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane 1 LR 1 KEGG:R04541 KEGG reaction METACYC:METHYL-COM-HTP-RXN Rhea MetaCyc REACTION RHEA:12535 Rhea reaction 1 1 1 1 KEGG:R04549 METACYC:LIPIDXSYNTHESIS-RXN RHEA:25216 reaction UPa:UCR04549 H(2)O + UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine = UMP + lipid X 1 LR 1 KEGG:R04549 KEGG reaction METACYC:LIPIDXSYNTHESIS-RXN MetaCyc MetaCyc REACTION RHEA:25216 Rhea reaction 1 1 1 1 KEGG:R04550 RHEA:17820 reaction UPa:UCR04550 (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] + UDP-3-O-(3-hydroxytetradecanoyl)-D-glucosamine = UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine + acyl-carrier protein 1 LR 1 KEGG:R04550 KEGG reaction RHEA:17820 Rhea reaction 1 1 1 1 1 KEGG:R04558 METACYC:GLUTAMIDOTRANS-RXN RHEA:24796 reaction UPa:UCR04558 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide + L-glutamine = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate + L-glutamate 1 1 LR 1 LR 1 KEGG:R04558 KEGG reaction METACYC:GLUTAMIDOTRANS-RXN MetaCyc MetaCyc REACTION RHEA:24796 Rhea reaction 1 1 1 KEGG:R04559 METACYC:AICARSYN-RXN RHEA:23923 reaction UPa:UCR04559 (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinic acid = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + fumarate 1 LR 1 KEGG:R04559 KEGG reaction METACYC:AICARSYN-RXN Rhea MetaCyc REACTION RHEA:23923 Rhea reaction 1 1 1 1 KEGG:R04560 METACYC:AICARTRANSFORM-RXN RHEA:22195 reaction UPa:UCR04560 10-formyl-5,6,7,8-tetrahydrofolate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide = 5,6,7,8-tetrahydrofolate + 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide 1 LR 1 KEGG:R04560 KEGG reaction METACYC:AICARTRANSFORM-RXN Rhea MetaCyc REACTION RHEA:22195 Rhea reaction 1 1 1 1 KEGG:R04567 RHEA:13928 reaction UPa:UCR04567 (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] + UDP-N-acetyl-alpha-D-glucosamine = UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine + acyl-carrier protein 1 LR 1 KEGG:R04567 KEGG reaction RHEA:13928 Rhea reaction 1 1 1 1 KEGG:R04587 METACYC:UDPACYLGLCNACDEACETYL-RXN RHEA:25212 reaction UPa:UCR04587 H(2)O + UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine = UDP-3-O-(3-hydroxytetradecanoyl)-D-glucosamine + acetate 1 LR 1 KEGG:R04587 KEGG reaction METACYC:UDPACYLGLCNACDEACETYL-RXN MetaCyc MetaCyc REACTION RHEA:25212 Rhea reaction 1 1 1 1 1 1 KEGG:R04591 METACYC:SAICARSYN-RXN RHEA:22631 reaction UPa:UCR04591 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + ATP + L-aspartate = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinic acid + ADP + phosphate 1 LR 1 KEGG:R04591 KEGG reaction METACYC:SAICARSYN-RXN Rhea MetaCyc REACTION RHEA:22631 Rhea reaction 1 1 1 1 KEGG:R04594 METACYC:RIBAZOLEPHOSPHAT-RXN RHEA:24459 RHEA:30370 reaction UPa:UCR04594 H(2)O + alpha-ribazole 5'-phosphate = alpha-ribazole + phosphate 1 LR 1 KEGG:R04594 KEGG reaction METACYC:RIBAZOLEPHOSPHAT-RXN MetaCyc MetaCyc REACTION RHEA:24459 Rhea reaction RHEA:30370 Rhea reaction 1 1 1 1 KEGG:R04606 METACYC:LIPIDADISACCHARIDESYNTH-RXN RHEA:22671 reaction UPa:UCR04606 UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine + lipid X = 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-alpha-D-glucosaminyl-1,6-beta-D-glucosamine 1-phosphate + UDP 1 LR 1 KEGG:R04606 KEGG reaction METACYC:LIPIDADISACCHARIDESYNTH-RXN MetaCyc MetaCyc REACTION RHEA:22671 Rhea reaction 1 1 1 1 KEGG:R04621 METACYC:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN RHEA:25309 reaction UPa:UCR04621 7,8-dihydroneopterin + phosphate = 7,8-dihydroneopterin 3'-phosphate + H(2)O 1 RL 1 KEGG:R04621 KEGG reaction METACYC:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN MetaCyc MetaCyc REACTION RHEA:25309 Rhea reaction 1 1 1 1 KEGG:R04638 METACYC:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN RHEA:25305 reaction UPa:UCR04638 7,8-dihydroneopterin triphosphate + H(2)O = 7,8-dihydroneopterin 3'-phosphate + diphosphate 1 LR 1 KEGG:R04638 KEGG reaction METACYC:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN MetaCyc MetaCyc REACTION RHEA:25305 Rhea reaction 1 1 1 KEGG:R04639 reaction UPa:UCR04639 7,8-dihydroneopterin triphosphate + H(2)O = 2,5-diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine 1 RL 4 KEGG:R04639 KEGG reaction 1 1 KEGG:R04640 METACYC:PRIBFAICARPISOM-RXN RHEA:15472 reaction UPa:UCR04640 5-(5-phospho-D-ribosylaminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide = 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide 1 LR 1 KEGG:R04640 KEGG reaction METACYC:PRIBFAICARPISOM-RXN MetaCyc MetaCyc REACTION RHEA:15472 Rhea reaction 1 1 1 1 KEGG:R04657 METACYC:TETRAACYLDISACC4KIN-RXN RHEA:20703 reaction UPa:UCR04657 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-alpha-D-glucosaminyl-1,6-beta-D-glucosamine 1-phosphate + ATP = ADP + lipid IV(A) 1 LR 1 KEGG:R04657 KEGG reaction METACYC:TETRAACYLDISACC4KIN-RXN Rhea MetaCyc REACTION RHEA:20703 Rhea reaction 1 1 1 1 KEGG:R04658 METACYC:KDOTRANS-RXN RHEA:28069 reaction UPa:UCR04658 CMP-3-deoxy-D-manno-octulosonate + lipid IV(A) = 3-deoxy-D-manno-octulosonyl-lipid IV((A)) + CMP 1 LR 1 KEGG:R04658 KEGG reaction METACYC:KDOTRANS-RXN MetaCyc MetaCyc REACTION RHEA:28069 Rhea reaction 1 1 1 1 KEGG:R04672 METACYC:RXN-14037 RHEA:24808 reaction UPa:UCR04672 (S)-2-acetolactate + thiamine diphosphate = 2-hydroxyethyl-ThPP + pyruvate 1 RL 2 KEGG:R04672 KEGG reaction METACYC:RXN-14037 MetaCyc MetaCyc REACTION RHEA:24808 Rhea reaction 1 1 1 1 KEGG:R04673 RHEA:33694 reaction UPa:UCR04673 2-hydroxyethyl-ThPP + 2-oxobutanoate = (S)-2-acetyl-2-hydroxybutanoic acid + thiamine diphosphate 1 LR 1 KEGG:R04673 KEGG reaction RHEA:33694 Rhea reaction 1 1 1 1 1 KEGG:R04692 METACYC:2.1.1.140-RXN RHEA:17412 reaction UPa:UCR04692 (S)-coclaurine + S-adenosyl-L-methionine = (S)-N-methylcoclaurine + H(+) + S-adenosyl-L-homocysteine 1 LR 1 KEGG:R04692 KEGG reaction METACYC:2.1.1.140-RXN MetaCyc MetaCyc REACTION RHEA:17412 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R04694 METACYC:1.1.3.34-RXN RHEA:23579 reaction UPa:UCR04694 2 H(2)O + NADP(+) + berbamunine = (R)-N-methylcoclaurine + (S)-N-methylcoclaurine + H(+) + NADPH + O(2) 1 RL 1 KEGG:R04694 KEGG reaction METACYC:1.1.3.34-RXN MetaCyc MetaCyc REACTION RHEA:23579 Rhea reaction 1 1 1 1 1 KEGG:R04862 reaction UPa:UCR04862 NAD(+) + homoisocitrate = 2-oxaloglutaric acid + H(+) + NADH 1 LR 1 KEGG:R04862 KEGG reaction 1 1 1 1 KEGG:R04863 reaction UPa:UCR04863 alpha-aminoadipoyl-C6-AMP + holo-Lys2 = AMP + alpha-aminoadipoyl-S-acyl enzyme 1 LR 2 KEGG:R04863 KEGG reaction 1 1 1 1 1 1 KEGG:R04868 METACYC:2.3.1.164-RXN RHEA:20723 reaction UPa:UCR04868 H(2)O + isopenicillin N + phenylacetyl-CoA = CoA + L-alpha-aminoadipate + penicillin G 1 LR 1 KEGG:R04868 KEGG reaction METACYC:2.3.1.164-RXN Rhea MetaCyc REACTION RHEA:20723 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R04870 METACYC:6.3.2.26-RXN RHEA:23199 reaction UPa:UCR04870 3 ATP + H(2)O + L-alpha-aminoadipate + L-cysteine + L-valine = 3 AMP + N-[L-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 diphosphate 1 LR 1 KEGG:R04870 KEGG reaction METACYC:6.3.2.26-RXN MetaCyc MetaCyc REACTION RHEA:23199 Rhea reaction 1 1 1 1 KEGG:R04872 METACYC:1.21.3.1-RXN RHEA:22431 reaction UPa:UCR04872 N-[L-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O(2) = 2 H(2)O + isopenicillin N 1 LR 1 KEGG:R04872 KEGG reaction METACYC:1.21.3.1-RXN MetaCyc MetaCyc REACTION RHEA:22431 Rhea reaction 1 1 1 1 KEGG:R05046 reaction UPa:UCR05046 H(2)O + formamidopyrimidine nucleoside triphosphate = 2,5-diaminopyrimidine nucleoside triphosphate + formate 1 LR 2 KEGG:R05046 KEGG reaction 1 1 KEGG:R05048 reaction UPa:UCR05048 2,5-diaminopyrimidine nucleoside triphosphate = 2,5-diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine 1 LR 3 KEGG:R05048 KEGG reaction 1 1 1 1 1 1 KEGG:R05049 METACYC:SUCCGLUALDDEHYD-RXN RHEA:10815 reaction UPa:UCR05049 H(2)O + N-succinyl-L-glutamate 5-semialdehyde + NAD(+) = H(+) + N(2)-succinyl-L-glutamic acid + NADH 1 LR 1 KEGG:R05049 KEGG reaction METACYC:SUCCGLUALDDEHYD-RXN Rhea MetaCyc REACTION RHEA:10815 Rhea reaction 1 1 1 1 1 KEGG:R05068 reaction UPa:UCR05068 (2R,3R)-2,3-dihydroxy-3-methylpentanoic acid + NADP(+) = (R)-3-hydroxy-3-methyl-2-oxopentanoate + H(+) + NADPH 1 RL 2 KEGG:R05068 KEGG reaction 1 1 KEGG:R05069 RHEA:25407 reaction UPa:UCR05069 (S)-2-acetyl-2-hydroxybutanoic acid = (R)-3-hydroxy-3-methyl-2-oxopentanoate 1 LR 1 KEGG:R05069 KEGG reaction RHEA:25407 Rhea reaction 1 1 1 KEGG:R05070 METACYC:DIHYDROXYMETVALDEHYDRAT-RXN RHEA:27697 reaction UPa:UCR05070 (2R,3R)-2,3-dihydroxy-3-methylpentanoic acid = (S)-3-methyl-2-oxopentanoate + H(2)O 1 LR 1 KEGG:R05070 KEGG reaction METACYC:DIHYDROXYMETVALDEHYDRAT-RXN MetaCyc MetaCyc REACTION RHEA:27697 Rhea reaction 1 1 KEGG:R05071 METACYC:2-ACETOLACTATE-MUTASE-RXN RHEA:31258 reaction UPa:UCR05071 (S)-2-acetolactate = 2-oxo-3-hydroxyisovalerate 1 LR 1 KEGG:R05071 KEGG reaction METACYC:2-ACETOLACTATE-MUTASE-RXN Rhea MetaCyc REACTION RHEA:31258 Rhea reaction 1 1 1 1 KEGG:R05074 METACYC:KDOTRANS2-RXN RHEA:28065 reaction UPa:UCR05074 3-deoxy-D-manno-octulosonyl-lipid IV((A)) + CMP-3-deoxy-D-manno-octulosonate = CMP + di[3-deoxy-D-manno-octulosonyl]-lipid IV(A) 1 LR 1 KEGG:R05074 KEGG reaction METACYC:KDOTRANS2-RXN MetaCyc MetaCyc REACTION RHEA:28065 Rhea reaction 1 1 1 1 KEGG:R05075 RHEA:28441 reaction UPa:UCR05075 lauroyl-KDO(2)-lipid IV(A) + tetradecanoyl-[acp] = KDO(2)-lipid A + acyl-carrier protein 1 LR 1 KEGG:R05075 KEGG reaction RHEA:28441 Rhea reaction 1 1 1 1 KEGG:R05085 METACYC:PSERTRANSAMPYR-RXN RHEA:16576 reaction UPa:UCR05085 2-oxoglutarate + 4-(phosphonooxy)-L-threonine = (R)-3-hydroxy-2-oxo-4-phosphonooxybutanoic acid + L-glutamate 1 RL 1 KEGG:R05085 KEGG reaction METACYC:PSERTRANSAMPYR-RXN Rhea MetaCyc REACTION RHEA:16576 Rhea reaction 1 1 1 1 KEGG:R05123 METACYC:2.1.1.128-RXN RHEA:31910 reaction UPa:UCR05123 (S)-norcoclaurine + S-adenosyl-L-methionine = (S)-coclaurine + S-adenosyl-L-homocysteine 1 LR 1 KEGG:R05123 KEGG reaction METACYC:2.1.1.128-RXN MetaCyc MetaCyc REACTION RHEA:31910 Rhea reaction 1 1 1 1 KEGG:R05146 RHEA:28445 reaction UPa:UCR05146 di[3-deoxy-D-manno-octulosonyl]-lipid IV(A) + dodecanoyl-[acyl-carrier protein] = acyl-carrier protein + lauroyl-KDO(2)-lipid IV(A) 1 LR 1 KEGG:R05146 KEGG reaction RHEA:28445 Rhea reaction 1 1 1 1 1 KEGG:R05149 METACYC:2.1.1.132-RXN RHEA:17480 reaction UPa:UCR05149 2 S-adenosyl-L-methionine + precorrin-6B = CO(2) + 2 S-adenosyl-L-homocysteine + precorrin-8X 1 LR 1 KEGG:R05149 KEGG reaction METACYC:2.1.1.132-RXN Rhea MetaCyc REACTION RHEA:17480 Rhea reaction 1 1 1 1 1 KEGG:R05150 METACYC:1.3.1.54-RXN RHEA:23411 reaction UPa:UCR05150 NADP(+) + precorrin-6B = H(+) + NADPH + precorrin-6A 1 RL 1 KEGG:R05150 KEGG reaction METACYC:1.3.1.54-RXN Rhea MetaCyc REACTION RHEA:23411 Rhea reaction 1 1 KEGG:R05176 METACYC:5.1.3.20-RXN RHEA:17580 reaction UPa:UCR05176 ADP-D-glycero-beta-D-manno-heptose = ADP-L-glycero-beta-D-manno-heptose 1 LR 1 KEGG:R05176 KEGG reaction METACYC:5.1.3.20-RXN MetaCyc MetaCyc REACTION RHEA:17580 Rhea reaction 1 1 KEGG:R05177 METACYC:5.4.1.2-RXN RHEA:22515 reaction UPa:UCR05177 precorrin-8X = hydrogenobyrinic acid 1 LR 1 KEGG:R05177 KEGG reaction METACYC:5.4.1.2-RXN Rhea MetaCyc REACTION RHEA:22515 Rhea reaction 1 1 1 1 KEGG:R05180 METACYC:2.1.1.131-RXN RHEA:12764 reaction UPa:UCR05180 S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4 1 LR 1 KEGG:R05180 KEGG reaction METACYC:2.1.1.131-RXN Rhea MetaCyc REACTION RHEA:12764 Rhea reaction 1 1 1 1 KEGG:R05181 METACYC:2.1.1.133-RXN RHEA:22015 reaction UPa:UCR05181 S-adenosyl-L-methionine + precorrin-4 = S-adenosyl-L-homocysteine + precorrin-5 1 LR 1 KEGG:R05181 KEGG reaction METACYC:2.1.1.133-RXN MetaCyc MetaCyc REACTION RHEA:22015 Rhea reaction 1 1 1 1 1 1 1 KEGG:R05217 METACYC:R321-RXN RHEA:17296 reaction UPa:UCR05217 H(+) + NADH + O(2) + precorrin-3A = H(2)O + NAD(+) + precorrin-3B 1 LR 1 KEGG:R05217 KEGG reaction METACYC:R321-RXN MetaCyc MetaCyc REACTION RHEA:17296 Rhea reaction 1 1 1 1 1 KEGG:R05218 METACYC:R343-RXN RHEA:24303 reaction UPa:UCR05218 FMNH(2) + 2 cob(II)yrinate a,c-diamide = FMN + 2 H(+) + 2 cob(I)yrinic acid a,c-diamide 1 LR 1 KEGG:R05218 KEGG reaction METACYC:R343-RXN MetaCyc MetaCyc REACTION RHEA:24303 Rhea reaction 1 1 1 1 1 1 KEGG:R05219 METACYC:R322-RXN RHEA:18264 reaction UPa:UCR05219 S-adenosyl-L-homocysteine + acetate + precorrin-6A = H(2)O + S-adenosyl-L-methionine + precorrin-5 1 RL 1 KEGG:R05219 KEGG reaction METACYC:R322-RXN MetaCyc MetaCyc REACTION RHEA:18264 Rhea reaction 1 1 1 1 KEGG:R05220 METACYC:R344-RXN RHEA:11531 reaction UPa:UCR05220 ATP + cob(I)yrinic acid a,c-diamide = adenosylcob(III)yrinic acid a,c-diamide + triphosphate 1 LR 1 KEGG:R05220 KEGG reaction METACYC:R344-RXN MetaCyc MetaCyc REACTION RHEA:11531 Rhea reaction 1 1 1 1 KEGG:R05221 METACYC:COBINAMIDEKIN-RXN RHEA:15772 reaction UPa:UCR05221 ATP + adenosylcobinamide = ADP + adenosylcobinamide phosphate 1 LR 1 KEGG:R05221 KEGG reaction METACYC:COBINAMIDEKIN-RXN Rhea MetaCyc REACTION RHEA:15772 Rhea reaction 1 1 1 1 KEGG:R05222 METACYC:COBINPGUANYLYLTRANS-RXN RHEA:22715 reaction UPa:UCR05222 GTP + adenosylcobinamide phosphate = adenosylcobinamide-GDP + diphosphate 1 LR 1 KEGG:R05222 KEGG reaction METACYC:COBINPGUANYLYLTRANS-RXN Rhea MetaCyc REACTION RHEA:22715 Rhea reaction 1 1 1 1 KEGG:R05223 METACYC:COBALAMINSYN-RXN RHEA:16052 reaction UPa:UCR05223 GMP + adenosylcobalamin = adenosylcobinamide-GDP + alpha-ribazole 1 RL 1 KEGG:R05223 KEGG reaction METACYC:COBALAMINSYN-RXN Rhea MetaCyc REACTION RHEA:16052 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R05224 METACYC:R341-RXN RHEA:12547 reaction UPa:UCR05224 2 ATP + 2 H(2)O + 2 L-glutamine + hydrogenobyrinic acid = 2 ADP + 2 L-glutamate + hydrogenobyrinic acid a,c-diamide + 2 phosphate 1 LR 1 KEGG:R05224 KEGG reaction METACYC:R341-RXN Rhea MetaCyc REACTION RHEA:12547 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R05225 METACYC:R345-RXN RHEA:23259 reaction UPa:UCR05225 4 ATP + 4 H(2)O + 4 L-glutamine + adenosylcob(III)yrinic acid a,c-diamide = 4 ADP + 4 L-glutamate + adenosylcobyrinic acid a,c-diamide + 4 phosphate 1 LR 1 KEGG:R05225 KEGG reaction METACYC:R345-RXN Rhea MetaCyc REACTION RHEA:23259 Rhea reaction 1 1 1 1 KEGG:R05226 METACYC:R346-RXN RHEA:23507 reaction UPa:UCR05226 (R)-1-aminopropan-2-ol + adenosylcobyrinic acid a,c-diamide = H(2)O + adenosylcobinamide 1 LR 1 KEGG:R05226 KEGG reaction METACYC:R346-RXN MetaCyc MetaCyc REACTION RHEA:23507 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R05227 METACYC:R342-RXN RHEA:15344 reaction UPa:UCR05227 ATP + Co(2+) + H(2)O + hydrogenobyrinic acid a,c-diamide = ADP + H(+) + cob(II)yrinate a,c-diamide + phosphate 1 LR 1 KEGG:R05227 KEGG reaction METACYC:R342-RXN MetaCyc MetaCyc REACTION RHEA:15344 Rhea reaction 1 1 1 1 1 KEGG:R05239 METACYC:1.3.1.56-RXN RHEA:17036 reaction UPa:UCR05239 NAD(+) + cis-3-phenylcyclohexa-3,5-diene-1,2-diol = H(+) + NADH + biphenyl-2,3-diol 1 LR 1 KEGG:R05239 KEGG reaction METACYC:1.3.1.56-RXN MetaCyc MetaCyc REACTION RHEA:17036 Rhea reaction 1 1 1 1 1 KEGG:R05240 METACYC:RXN-665 RHEA:23775 reaction UPa:UCR05240 NAD(+) + cis-2,3-dihydroxy-2,3-dihydro-p-cumic acid = 2,3-dihydroxy-p-cumic acid + H(+) + NADH 1 LR 1 KEGG:R05240 KEGG reaction METACYC:RXN-665 Rhea MetaCyc REACTION RHEA:23775 Rhea reaction 1 1 1 1 1 1 KEGG:R05247 METACYC:RXN-664 RHEA:42347 reaction UPa:UCR05247 H(+) + NADH + O(2) + p-cumate = NAD(+) + cis-2,3-dihydroxy-2,3-dihydro-p-cumic acid 1 LR 1 KEGG:R05247 KEGG reaction METACYC:RXN-664 MetaCyc MetaCyc REACTION RHEA:42347 Rhea reaction 1 1 1 KEGG:R05248 METACYC:RXN-666 RHEA:42571 reaction UPa:UCR05248 2,3-dihydroxy-p-cumic acid + O(2) = 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoic acid 1 LR 1 KEGG:R05248 KEGG reaction METACYC:RXN-666 MetaCyc MetaCyc REACTION RHEA:42571 Rhea reaction 1 1 1 1 1 1 KEGG:R05263 METACYC:1.14.12.18-RXN RHEA:18168 reaction UPa:UCR05263 H(+) + NADH + O(2) + biphenyl = NAD(+) + cis-3-phenylcyclohexa-3,5-diene-1,2-diol 1 LR 1 KEGG:R05263 KEGG reaction METACYC:1.14.12.18-RXN MetaCyc MetaCyc REACTION RHEA:18168 Rhea reaction 1 1 1 1 1 KEGG:R05275 METACYC:1.3.1.64-RXN RHEA:13840 reaction UPa:UCR05275 NAD(+) + cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylic acid = 4,5-dihydroxyphthalate + H(+) + NADH 1 LR 1 KEGG:R05275 KEGG reaction METACYC:1.3.1.64-RXN Rhea MetaCyc REACTION RHEA:13840 Rhea reaction 1 1 1 1 KEGG:R05284 METACYC:DHLAXANAU-RXN RHEA:25188 reaction UPa:UCR05284 1,2-dichloroethane + H(2)O = 2-chloroethanol + HCl 1 LR 1 KEGG:R05284 KEGG reaction METACYC:DHLAXANAU-RXN MetaCyc MetaCyc REACTION RHEA:25188 Rhea reaction 1 1 1 1 1 KEGG:R05285 reaction UPa:UCR05285 2-chloroethanol + 2 ferricytochrome c = 2 H(+) + chloroacetaldehyde + 2 ferrocytochrome c 1 LR 1 KEGG:R05285 KEGG reaction 1 1 1 1 1 1 KEGG:R05286 METACYC:ALDXANAU-RXN RHEA:30050 reaction UPa:UCR05286 H(2)O + NAD(+) + chloroacetaldehyde = H(+) + NADH + chloroacetic acid 1 LR 1 KEGG:R05286 KEGG reaction METACYC:ALDXANAU-RXN MetaCyc MetaCyc REACTION RHEA:30050 Rhea reaction 1 1 1 1 KEGG:R05287 METACYC:DHLBXANAU-RXN RHEA:25192 reaction UPa:UCR05287 H(2)O + chloroacetic acid = HCl + glycolate 1 LR 1 KEGG:R05287 KEGG reaction METACYC:DHLBXANAU-RXN MetaCyc MetaCyc REACTION RHEA:25192 Rhea reaction 1 1 1 1 1 1 1 KEGG:R05320 METACYC:RXN0-299 RHEA:15912 reaction UPa:UCR05320 2-oxoglutarate + O(2) + taurine = CO(2) + aminoacetaldehyde + succinate + sulfite 1 LR 1 KEGG:R05320 KEGG reaction METACYC:RXN0-299 MetaCyc MetaCyc REACTION RHEA:15912 Rhea reaction 1 1 1 1 KEGG:R05332 METACYC:2.3.1.157-RXN RHEA:13728 reaction UPa:UCR05332 acetyl-CoA + alpha-D-glucosamine 1-phosphate = CoA + N-acetyl-alpha-D-glucosamine 1-phosphate 1 LR 1 KEGG:R05332 KEGG reaction METACYC:2.3.1.157-RXN MetaCyc MetaCyc REACTION RHEA:13728 Rhea reaction 1 1 1 KEGG:R05338 METACYC:R10-RXN RHEA:25204 reaction UPa:UCR05338 D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate 1 LR 1 KEGG:R05338 KEGG reaction METACYC:R10-RXN MetaCyc MetaCyc REACTION RHEA:25204 Rhea reaction 1 1 KEGG:R05339 METACYC:R12-RXN RHEA:25903 reaction UPa:UCR05339 D-arabino-3-hexulose 6-phosphate = D-fructose 6-phosphate 1 LR 1 KEGG:R05339 KEGG reaction METACYC:R12-RXN MetaCyc MetaCyc REACTION RHEA:25903 Rhea reaction 1 1 1 1 KEGG:R05357 METACYC:3.5.3.22-RXN RHEA:17004 reaction UPa:UCR05357 H(2)O + amidinoproclavaminic acid = proclavaminic acid + urea 1 LR 1 KEGG:R05357 KEGG reaction METACYC:3.5.3.22-RXN Rhea MetaCyc REACTION RHEA:17004 Rhea reaction 1 1 1 1 KEGG:R05360 METACYC:R608-RXN RHEA:42471 reaction UPa:UCR05360 2-hydroxy-6-(2-hydroxyphenyl)-6-oxo-cis,cis-hexa-2,4-dienoic acid + H(2)O = 2-hydroxy-2,4-pentadienoate + salicylate 1 LR 1 KEGG:R05360 KEGG reaction METACYC:R608-RXN MetaCyc MetaCyc REACTION RHEA:42471 Rhea reaction 1 1 1 1 KEGG:R05361 RHEA:42483 reaction UPa:UCR05361 2-hydroxy-6-(2-hydroxyphenoxy)-6-oxo-cis,cis-hexa-2,4-dienoic acid + H(2)O = 2-hydroxymuconate + catechol 1 LR 1 KEGG:R05361 KEGG reaction RHEA:42483 Rhea reaction 1 1 1 1 KEGG:R05364 METACYC:RXN-668 RHEA:42579 reaction UPa:UCR05364 2-hydroxy-6-oxo-7-methylocta-2,4-dienoic acid + H(2)O = 2-hydroxy-2,4-pentadienoate + 2-methylpropanoate 1 LR 1 KEGG:R05364 KEGG reaction METACYC:RXN-668 Rhea MetaCyc REACTION RHEA:42579 Rhea reaction 1 1 1 KEGG:R05377 METACYC:RXN-667 RHEA:42575 reaction UPa:UCR05377 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoic acid = 2-hydroxy-6-oxo-7-methylocta-2,4-dienoic acid + CO(2) 1 LR 1 KEGG:R05377 KEGG reaction METACYC:RXN-667 Rhea MetaCyc REACTION RHEA:42575 Rhea reaction 1 1 1 KEGG:R05378 METACYC:4.1.2.29-RXN RHEA:13180 reaction UPa:UCR05378 6-phospho-5-dehydro-2-deoxy-D-gluconic acid = 3-oxopropanoate + glycerone phosphate 1 LR 1 KEGG:R05378 KEGG reaction METACYC:4.1.2.29-RXN MetaCyc MetaCyc REACTION RHEA:13180 Rhea reaction 1 1 1 KEGG:R05411 METACYC:R607-RXN RHEA:42467 reaction UPa:UCR05411 O(2) + biphenyl-2,2',3-triol = 2-hydroxy-6-(2-hydroxyphenyl)-6-oxo-cis,cis-hexa-2,4-dienoic acid 1 LR 1 KEGG:R05411 KEGG reaction METACYC:R607-RXN MetaCyc MetaCyc REACTION RHEA:42467 Rhea reaction 1 1 1 KEGG:R05413 METACYC:R604-RXN RHEA:42479 reaction UPa:UCR05413 2,2',3-trihydroxy-diphenyl ether + O(2) = 2-hydroxy-6-(2-hydroxyphenoxy)-6-oxo-cis,cis-hexa-2,4-dienoic acid 1 LR 1 KEGG:R05413 KEGG reaction METACYC:R604-RXN MetaCyc MetaCyc REACTION RHEA:42479 Rhea reaction 1 1 1 1 1 1 KEGG:R05434 METACYC:R606-RXN RHEA:42463 reaction UPa:UCR05434 H(+) + NADH + O(2) + dibenzofuran = NAD(+) + biphenyl-2,2',3-triol 1 LR 1 KEGG:R05434 KEGG reaction METACYC:R606-RXN MetaCyc MetaCyc REACTION RHEA:42463 Rhea reaction 1 1 1 1 1 1 KEGG:R05439 RHEA:42475 reaction UPa:UCR05439 H(+) + NADH + O(2) + dibenzo-p-dioxin = 2,2',3-trihydroxy-diphenyl ether + NAD(+) 1 LR 1 KEGG:R05439 KEGG reaction RHEA:42475 Rhea reaction 1 1 1 1 KEGG:R05465 METACYC:2.5.1.66-RXN RHEA:10559 reaction UPa:UCR05465 D-glyceraldehyde 3-phosphate + L-arginine = N(2)-(2-carboxyethyl)-L-arginine + phosphate 1 LR 1 KEGG:R05465 KEGG reaction METACYC:2.5.1.66-RXN MetaCyc MetaCyc REACTION RHEA:10559 Rhea reaction 1 1 1 1 1 1 KEGG:R05466 METACYC:1.14.11.21-RXN RHEA:20024 reaction UPa:UCR05466 2-oxoglutarate + O(2) + deoxyamidinoproclavaminic acid = CO(2) + amidinoproclavaminic acid + succinate 1 LR 1 KEGG:R05466 KEGG reaction METACYC:1.14.11.21-RXN MetaCyc MetaCyc REACTION RHEA:20024 Rhea reaction 1 1 1 1 1 KEGG:R05467 METACYC:6.3.3.4-RXN RHEA:23623 reaction UPa:UCR05467 ATP + N(2)-(2-carboxyethyl)-L-arginine = AMP + deoxyamidinoproclavaminic acid + diphosphate 1 LR 1 KEGG:R05467 KEGG reaction METACYC:6.3.3.4-RXN MetaCyc MetaCyc REACTION RHEA:23623 Rhea reaction 1 1 1 1 1 1 1 KEGG:R05468 METACYC:RXN-6266 RHEA:12776 RHEA:19788 reaction UPa:UCR05468 2-oxoglutarate + O(2) + proclavaminic acid = CO(2) + H(2)O + dihydroclavaminic acid + succinate 1 LR 1 KEGG:R05468 KEGG reaction METACYC:RXN-6266 MetaCyc MetaCyc REACTION RHEA:12776 Rhea reaction RHEA:19788 Rhea reaction 1 1 1 1 1 1 1 KEGG:R05469 METACYC:RXN-6267 reaction UPa:UCR05469 2-oxoglutarate + O(2) + dihydroclavaminic acid = CO(2) + H(2)O + clavaminate + succinate 1 LR 1 KEGG:R05469 KEGG reaction METACYC:RXN-6267 MetaCyc MetaCyc REACTION 1 1 KEGG:R05470 METACYC:RXN-8892 RHEA:42431 reaction UPa:UCR05470 clavaminate = clavulanate-9-aldehyde 1 LR 1 KEGG:R05470 KEGG reaction METACYC:RXN-8892 MetaCyc MetaCyc REACTION RHEA:42431 Rhea reaction 1 1 1 1 1 KEGG:R05471 METACYC:RXN-8893 RHEA:42071 reaction UPa:UCR05471 H(+) + NADPH + clavulanate-9-aldehyde = NADP(+) + clavulanate 1 LR 1 KEGG:R05471 KEGG reaction METACYC:RXN-8893 Rhea MetaCyc REACTION RHEA:42071 Rhea reaction 1 1 1 1 KEGG:R05552 reaction UPa:UCR05552 NH(3) + chorismate = 4-amino-4-deoxychorismate + H(2)O 1 LR 1 KEGG:R05552 KEGG reaction 1 1 1 KEGG:R05553 METACYC:ADCLY-RXN RHEA:16204 reaction UPa:UCR05553 4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate 1 LR 1 KEGG:R05553 KEGG reaction METACYC:ADCLY-RXN Rhea MetaCyc REACTION RHEA:16204 Rhea reaction 1 1 1 1 KEGG:R05554 METACYC:URUR-RXN RHEA:25244 reaction UPa:UCR05554 2-ureidoglycine + H(2)O = (S)-ureidoglycolate + NH(3) 1 LR 2 KEGG:R05554 KEGG reaction METACYC:URUR-RXN MetaCyc MetaCyc REACTION RHEA:25244 Rhea reaction 1 1 1 1 KEGG:R05558 METACYC:3.8.1.8-RXN RHEA:11315 reaction UPa:UCR05558 H(2)O + atrazine = HCl + hydroxyatrazine 1 LR 1 KEGG:R05558 KEGG reaction METACYC:3.8.1.8-RXN MetaCyc MetaCyc REACTION RHEA:11315 Rhea reaction 1 1 1 1 KEGG:R05559 METACYC:R122-RXN RHEA:23095 reaction UPa:UCR05559 H(2)O + hydroxyatrazine = N-isopropylammelide + ethylamine 1 LR 1 KEGG:R05559 KEGG reaction METACYC:R122-RXN MetaCyc MetaCyc REACTION RHEA:23095 Rhea reaction 1 1 1 1 KEGG:R05560 METACYC:R123-RXN RHEA:23611 reaction UPa:UCR05560 H(2)O + N-isopropylammelide = cyanurate + isopropylamine 1 LR 1 KEGG:R05560 KEGG reaction METACYC:R123-RXN MetaCyc MetaCyc REACTION RHEA:23611 Rhea reaction 1 1 1 KEGG:R05605 METACYC:KDPGALDOL-RXN RHEA:17092 reaction UPa:UCR05605 2-dehydro-3-deoxy-6-phospho-D-gluconic acid = D-glyceraldehyde 3-phosphate + pyruvate 1 LR 1 KEGG:R05605 KEGG reaction METACYC:KDPGALDOL-RXN MetaCyc MetaCyc REACTION RHEA:17092 Rhea reaction 1 1 1 KEGG:R05608 METACYC:GALACTARDEHYDRA-RXN RHEA:16008 reaction UPa:UCR05608 galactarate = 5-dehydro-4-deoxy-D-glucarate + H(2)O 1 LR 1 KEGG:R05608 KEGG reaction METACYC:GALACTARDEHYDRA-RXN MetaCyc MetaCyc REACTION RHEA:16008 Rhea reaction 1 1 1 1 1 1 KEGG:R05621 METACYC:BENZOATE-12-DIOXYGENASE-RXN RHEA:12636 reaction UPa:UCR05621 H(+) + NADH + O(2) + benzoate = (1R,6S)-1,6-dihydroxycyclohexa-2,4-dienecarboxylic acid + NAD(+) 1 LR 1 KEGG:R05621 KEGG reaction METACYC:BENZOATE-12-DIOXYGENASE-RXN MetaCyc MetaCyc REACTION RHEA:12636 Rhea reaction 1 1 1 1 KEGG:R05633 METACYC:2.7.7.60-RXN RHEA:13432 reaction UPa:UCR05633 2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate 1 LR 1 KEGG:R05633 KEGG reaction METACYC:2.7.7.60-RXN Rhea MetaCyc REACTION RHEA:13432 Rhea reaction 1 1 1 1 KEGG:R05634 METACYC:2.7.1.148-RXN RHEA:18440 reaction UPa:UCR05634 4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP 1 LR 1 KEGG:R05634 KEGG reaction METACYC:2.7.1.148-RXN MetaCyc MetaCyc REACTION RHEA:18440 Rhea reaction 1 1 1 1 KEGG:R05636 METACYC:DXS-RXN RHEA:12608 reaction UPa:UCR05636 D-glyceraldehyde 3-phosphate + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO(2) 1 LR 1 KEGG:R05636 KEGG reaction METACYC:DXS-RXN MetaCyc MetaCyc REACTION RHEA:12608 Rhea reaction 1 1 1 KEGG:R05637 METACYC:RXN0-302 RHEA:23867 reaction UPa:UCR05637 4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP 1 LR 1 KEGG:R05637 KEGG reaction METACYC:RXN0-302 MetaCyc MetaCyc REACTION RHEA:23867 Rhea reaction 1 1 1 1 1 KEGG:R05639 METACYC:RXN66-306 RHEA:18564 reaction UPa:UCR05639 14-demethyllanosterol + NADP(+) = 4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol + H(+) + NADPH 1 RL 1 KEGG:R05639 KEGG reaction METACYC:RXN66-306 MetaCyc MetaCyc REACTION RHEA:18564 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R05640 METACYC:RXN3O-130 RHEA:25289 reaction UPa:UCR05640 3 H(+) + 3 NADPH + 3 O(2) + lanosterol = 4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol + 4 H(2)O + 3 NADP(+) + formate 1 LR 1 KEGG:R05640 KEGG reaction METACYC:RXN3O-130 MetaCyc MetaCyc REACTION RHEA:25289 Rhea reaction 1 1 1 1 1 KEGG:R05641 METACYC:1.3.1.71-RXN RHEA:18504 reaction UPa:UCR05641 NADP(+) + ergosterol = H(+) + NADPH + ergosta-5,7,22,24(28)-tetraen-3beta-ol 1 RL 1 KEGG:R05641 KEGG reaction METACYC:1.3.1.71-RXN MetaCyc MetaCyc REACTION RHEA:18504 Rhea reaction 1 1 1 1 KEGG:R05644 METACYC:RXN0-4342 RHEA:27468 reaction UPa:UCR05644 ATP + D-glycero-beta-D-manno-heptose 1-phosphate = ADP-D-glycero-beta-D-manno-heptose + diphosphate 1 LR 1 KEGG:R05644 KEGG reaction METACYC:RXN0-4342 MetaCyc MetaCyc REACTION RHEA:27468 Rhea reaction 1 1 1 1 KEGG:R05646 RHEA:27476 reaction UPa:UCR05646 ATP + D-glycero-beta-D-manno-heptose 7-phosphate = ADP + D-glycero-beta-D-manno-heptose 1,7-diphosphate 1 LR 1 KEGG:R05646 KEGG reaction RHEA:27476 Rhea reaction 1 1 1 1 KEGG:R05647 METACYC:RXN0-4361 RHEA:28521 reaction UPa:UCR05647 D-glycero-beta-D-manno-heptose 1,7-diphosphate + H(2)O = D-glycero-beta-D-manno-heptose 1-phosphate + phosphate 1 LR 1 KEGG:R05647 KEGG reaction METACYC:RXN0-4361 MetaCyc MetaCyc REACTION RHEA:28521 Rhea reaction 1 1 1 1 KEGG:R05651 METACYC:RXN-2364 RHEA:24207 reaction UPa:UCR05651 phosphate + sulfoacetaldehyde = acetyl phosphate + sulfite 1 LR 1 KEGG:R05651 KEGG reaction METACYC:RXN-2364 MetaCyc MetaCyc REACTION RHEA:24207 Rhea reaction 1 1 1 1 KEGG:R05652 METACYC:TAURINE-AMINOTRANSFERASE-RXN RHEA:10423 reaction UPa:UCR05652 pyruvate + taurine = L-alanine + sulfoacetaldehyde 1 LR 1 KEGG:R05652 KEGG reaction METACYC:TAURINE-AMINOTRANSFERASE-RXN Rhea MetaCyc REACTION RHEA:10423 Rhea reaction 1 1 1 1 KEGG:R05661 METACYC:5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN RHEA:13500 reaction UPa:UCR05661 2-deoxy-5-keto-D-gluconic acid + ATP = 6-phospho-5-dehydro-2-deoxy-D-gluconic acid + ADP 1 LR 1 KEGG:R05661 KEGG reaction METACYC:5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN MetaCyc MetaCyc REACTION RHEA:13500 Rhea reaction 1 1 1 1 1 KEGG:R05681 METACYC:1.1.1.262-RXN RHEA:14456 reaction UPa:UCR05681 4-(phosphonooxy)-L-threonine + NAD(+) = 2-amino-3-oxo-4-phosphonooxybutyrate + H(+) + NADH 1 LR 1 KEGG:R05681 KEGG reaction METACYC:1.1.1.262-RXN MetaCyc MetaCyc REACTION RHEA:14456 Rhea reaction 1 1 1 1 1 KEGG:R05688 METACYC:DXPREDISOM-RXN RHEA:13720 reaction UPa:UCR05688 2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-xylulose 5-phosphate + H(+) + NADPH 1 RL 1 KEGG:R05688 KEGG reaction METACYC:DXPREDISOM-RXN Rhea MetaCyc REACTION RHEA:13720 Rhea reaction 1 1 1 1 1 KEGG:R05692 METACYC:1.1.1.271-RXN RHEA:18888 reaction UPa:UCR05692 GDP-L-fucose + NADP(+) = GDP-4-dehydro-6-deoxy-D-mannose + H(+) + NADPH 1 RL 1 KEGG:R05692 KEGG reaction METACYC:1.1.1.271-RXN MetaCyc MetaCyc REACTION RHEA:18888 Rhea reaction 1 1 1 1 1 1 1 KEGG:R05728 METACYC:1.14.13.68-RXN RHEA:18404 reaction UPa:UCR05728 (Z)-(4-hydroxyphenyl)acetaldehyde oxime + H(+) + NADPH + O(2) = (S)-4-hydroxymandelonitrile + 2 H(2)O + NADP(+) 1 LR 1 KEGG:R05728 KEGG reaction METACYC:1.14.13.68-RXN MetaCyc MetaCyc REACTION RHEA:18404 Rhea reaction 1 1 1 1 1 1 1 KEGG:R05732 METACYC:1.14.13.71-RXN RHEA:16652 reaction UPa:UCR05732 (S)-N-methylcoclaurine + H(+) + NADPH + O(2) = (S)-3'-hydroxy-N-methylcoclaurine + H(2)O + NADP(+) 1 LR 1 KEGG:R05732 KEGG reaction METACYC:1.14.13.71-RXN MetaCyc MetaCyc REACTION RHEA:16652 Rhea reaction 1 1 1 KEGG:R05765 METACYC:RXN-5106 RHEA:25491 RHEA:25665 reaction UPa:UCR05765 geranyl diphosphate = (-)-alpha-pinene + diphosphate 1 LR 1 KEGG:R05765 KEGG reaction METACYC:RXN-5106 MetaCyc MetaCyc REACTION RHEA:25491 Rhea reaction RHEA:25665 Rhea reaction 1 1 1 KEGG:R05766 METACYC:RXN-5107 RHEA:25499 RHEA:25669 reaction UPa:UCR05766 geranyl diphosphate = (-)-beta-pinene + diphosphate 1 LR 1 KEGG:R05766 KEGG reaction METACYC:RXN-5107 MetaCyc MetaCyc REACTION RHEA:25499 Rhea reaction RHEA:25669 Rhea reaction 1 1 1 1 KEGG:R05768 METACYC:2.4.1.217-RXN RHEA:13540 reaction UPa:UCR05768 3-phospho-D-glycerate + GDP-alpha-D-mannose = 2-(alpha-D-mannosyl)-3-phosphoglyceric acid + GDP 1 LR 1 KEGG:R05768 KEGG reaction METACYC:2.4.1.217-RXN MetaCyc MetaCyc REACTION RHEA:13540 Rhea reaction 1 1 1 KEGG:R05774 METACYC:R231-RXN RHEA:20951 reaction UPa:UCR05774 3-sulfopyruvate = CO(2) + sulfoacetaldehyde 1 LR 1 KEGG:R05774 KEGG reaction METACYC:R231-RXN MetaCyc MetaCyc REACTION RHEA:20951 Rhea reaction 1 1 1 KEGG:R05784 METACYC:RXN-9412 RHEA:10703 reaction UPa:UCR05784 (4R)-limonene 1,2-epoxide + H(2)O = (1S,2S,4R)-limonene-1,2-diol 1 LR 1 KEGG:R05784 KEGG reaction METACYC:RXN-9412 MetaCyc MetaCyc REACTION RHEA:10703 Rhea reaction 1 1 1 1 KEGG:R05789 METACYC:R229-RXN RHEA:23419 reaction UPa:UCR05789 (2R)-O-phospho-3-sulfolactic acid + H(2)O = (R)-3-sulfolactate + phosphate 1 LR 1 KEGG:R05789 KEGG reaction METACYC:R229-RXN MetaCyc MetaCyc REACTION RHEA:23419 Rhea reaction 1 1 1 1 KEGG:R05790 METACYC:3.1.3.70-RXN RHEA:19312 reaction UPa:UCR05790 2-(alpha-D-mannosyl)-3-phosphoglyceric acid + H(2)O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate 1 LR 1 KEGG:R05790 KEGG reaction METACYC:3.1.3.70-RXN MetaCyc MetaCyc REACTION RHEA:19312 Rhea reaction 1 1 1 1 KEGG:R05794 METACYC:2.7.8.24-RXN RHEA:14600 reaction UPa:UCR05794 CDP-diacylglycerol + choline = CMP + phosphatidylcholine 1 LR 1 KEGG:R05794 KEGG reaction METACYC:2.7.8.24-RXN Rhea MetaCyc REACTION RHEA:14600 Rhea reaction 1 1 1 1 KEGG:R05807 METACYC:4.99.1.3-RXN RHEA:15896 reaction UPa:UCR05807 Co(2+) + sirohydrochlorin = 2 H(+) + cobalt-precorrin-2 1 LR 1 KEGG:R05807 KEGG reaction METACYC:4.99.1.3-RXN Rhea MetaCyc REACTION RHEA:15896 Rhea reaction 1 1 1 1 KEGG:R05808 METACYC:2.1.1.151-RXN RHEA:18000 reaction UPa:UCR05808 S-adenosyl-L-methionine + cobalt-precorrin-2 = S-adenosyl-L-homocysteine + cobalt-factor III 1 LR 1 KEGG:R05808 KEGG reaction METACYC:2.1.1.151-RXN MetaCyc MetaCyc REACTION RHEA:18000 Rhea reaction 1 1 1 1 KEGG:R05809 METACYC:RXN-8761 RHEA:26276 reaction UPa:UCR05809 S-adenosyl-L-methionine + cobalt-precorrin 3 = S-adenosyl-L-homocysteine + cobalt-precorrin 4 1 LR 1 KEGG:R05809 KEGG reaction METACYC:RXN-8761 MetaCyc MetaCyc REACTION RHEA:26276 Rhea reaction 1 1 1 1 KEGG:R05810 METACYC:RXN-8762 RHEA:26280 reaction UPa:UCR05810 S-adenosyl-L-methionine + cobalt-precorrin 4 = S-adenosyl-L-homocysteine + cobalt-precorrin 5A 1 LR 1 KEGG:R05810 KEGG reaction METACYC:RXN-8762 MetaCyc MetaCyc REACTION RHEA:26280 Rhea reaction 1 1 1 1 1 KEGG:R05812 METACYC:RXN-8765 RHEA:15628 reaction UPa:UCR05812 H(+) + NADH + cobalt-precorrin-6A = NAD(+) + cobalt-precorrin-6B 1 LR 1 KEGG:R05812 KEGG reaction METACYC:RXN-8765 MetaCyc MetaCyc REACTION RHEA:15628 Rhea reaction 1 1 1 1 1 KEGG:R05813 reaction UPa:UCR05813 2 S-adenosyl-L-methionine + cobalt-precorrin-6B = CO(2) + 2 S-adenosyl-L-homocysteine + cobalt-precorrin 8 1 LR 1 KEGG:R05813 KEGG reaction 1 1 KEGG:R05814 METACYC:RXN-8768 RHEA:16212 reaction UPa:UCR05814 cobalt-precorrin 8 = cob(III)yrinic acid 1 LR 1 KEGG:R05814 KEGG reaction METACYC:RXN-8768 MetaCyc MetaCyc REACTION RHEA:16212 Rhea reaction 1 1 1 1 1 1 1 1 KEGG:R05815 METACYC:RXN-8769 RHEA:26292 reaction UPa:UCR05815 2 ATP + 2 H(2)O + 2 L-glutamine + cob(III)yrinic acid = 2 ADP + 2 L-glutamate + cob(II)yrinate a,c-diamide + 2 phosphate 1 LR 1 KEGG:R05815 KEGG reaction METACYC:RXN-8769 MetaCyc MetaCyc REACTION RHEA:26292 Rhea reaction 1 1 1 1 KEGG:R05820 RHEA:42487 reaction UPa:UCR05820 D-sorbitol + protein N(pi)-phospho-L-histidine = D-sorbitol 6-phosphate + protein-L-histidine 1 LR 1 KEGG:R05820 KEGG reaction RHEA:42487 Rhea reaction 1 1 1 1 1 KEGG:R05838 METACYC:PDXJ-RXN RHEA:15268 reaction UPa:UCR05838 1-deoxy-D-xylulose 5-phosphate + 3-amino-2-oxopropyl phosphate = 2 H(2)O + phosphate + pyridoxine 5'-phosphate 1 LR 1 KEGG:R05838 KEGG reaction METACYC:PDXJ-RXN MetaCyc MetaCyc REACTION RHEA:15268 Rhea reaction 1 1 KEGG:R05850 METACYC:RIBULPEPIM-RXN RHEA:22371 reaction UPa:UCR05850 L-ribulose 5-phosphate = D-xylulose 5-phosphate 1 1 LR 1 LR 1 KEGG:R05850 KEGG reaction METACYC:RIBULPEPIM-RXN Rhea MetaCyc REACTION RHEA:22371 Rhea reaction 1 1 1 1 1 1 1 KEGG:R05855 METACYC:1.14.13.73-RXN RHEA:14136 reaction UPa:UCR05855 H(+) + NADPH + O(2) + tabersonine = 16-hydroxytabersonine + H(2)O + NADP(+) 1 LR 1 KEGG:R05855 KEGG reaction METACYC:1.14.13.73-RXN MetaCyc MetaCyc REACTION RHEA:14136 Rhea reaction 1 1 1 KEGG:R05856 METACYC:RXN-8200 RHEA:42375 reaction UPa:UCR05856 16-methoxytabersonine + H(2)O = 3-hydroxy-16-methoxy-2,3-dihydrotabersonine 1 LR 1 KEGG:R05856 KEGG reaction METACYC:RXN-8200 MetaCyc MetaCyc REACTION RHEA:42375 Rhea reaction 1 1 1 1 1 1 KEGG:R05857 METACYC:1.14.11.20-RXN RHEA:18976 reaction UPa:UCR05857 2-oxoglutarate + O(2) + desacetoxyvindoline = CO(2) + deacetylvindoline + succinate 1 LR 1 KEGG:R05857 KEGG reaction METACYC:1.14.11.20-RXN MetaCyc MetaCyc REACTION RHEA:18976 Rhea reaction 1 1 1 1 1 1 KEGG:R05884 METACYC:ISPH2-RXN RHEA:24491 reaction UPa:UCR05884 (2E)-4-hydroxy-3-methylbutenyl diphosphate + H(+) + NADPH = H(2)O + NADP(+) + isopentenyl diphosphate 1 LR 1 KEGG:R05884 KEGG reaction METACYC:ISPH2-RXN MetaCyc MetaCyc REACTION RHEA:24491 Rhea reaction 1 1 1 1 1 KEGG:R05885 METACYC:2.1.1.94-RXN RHEA:20995 reaction UPa:UCR05885 16-hydroxytabersonine + S-adenosyl-L-methionine = 16-methoxytabersonine + H(+) + S-adenosyl-L-homocysteine 1 LR 1 KEGG:R05885 KEGG reaction METACYC:2.1.1.94-RXN MetaCyc MetaCyc REACTION RHEA:20995 Rhea reaction 1 1 1 1 1 KEGG:R06117 METACYC:RXN-9397 RHEA:14828 reaction UPa:UCR06117 (4S,6R)-trans-carveol + NAD(+) = (S)-carvone + H(+) + NADH 1 LR 1 KEGG:R06117 KEGG reaction METACYC:RXN-9397 MetaCyc MetaCyc REACTION RHEA:14828 Rhea reaction 1 1 1 1 1 1 1 KEGG:R06119 METACYC:RXN-10746 RHEA:18960 reaction UPa:UCR06119 (4R)-limonene + H(+) + NADPH + O(2) = (4S,6R)-trans-carveol + H(2)O + NADP(+) 1 LR 1 KEGG:R06119 KEGG reaction METACYC:RXN-10746 MetaCyc MetaCyc REACTION RHEA:18960 Rhea reaction 1 1 1 KEGG:R06120 METACYC:4.2.3.20-RXN RHEA:10943 reaction UPa:UCR06120 geranyl diphosphate = (4R)-limonene + diphosphate 1 LR 1 KEGG:R06120 KEGG reaction METACYC:4.2.3.20-RXN MetaCyc MetaCyc REACTION RHEA:10943 Rhea reaction 1 1 1 KEGG:R06171 METACYC:LTAA-RXN RHEA:26212 reaction UPa:UCR06171 L-allo-threonine = acetaldehyde + glycine 1 LR 1 KEGG:R06171 KEGG reaction METACYC:LTAA-RXN Rhea MetaCyc REACTION RHEA:26212 Rhea reaction 1 1 1 1 1 KEGG:R06180 METACYC:TARTRATE-DEHYDROGENASE-RXN RHEA:15212 reaction UPa:UCR06180 L-tartrate + NAD(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADH 1 LR 1 KEGG:R06180 KEGG reaction METACYC:TARTRATE-DEHYDROGENASE-RXN Rhea MetaCyc REACTION RHEA:15212 Rhea reaction 1 1 1 1 1 1 KEGG:R06223 RHEA:32298 reaction UPa:UCR06223 H(+) + NADPH + 2 farnesyl diphosphate = NADP(+) + 2 diphosphate + squalene 1 LR 1 KEGG:R06223 KEGG reaction RHEA:32298 Rhea reaction 1 1 1 KEGG:R06305 METACYC:4.2.3.17-RXN RHEA:20915 reaction UPa:UCR06305 geranylgeranyl diphosphate = diphosphate + taxa-4,11-diene 1 LR 1 KEGG:R06305 KEGG reaction METACYC:4.2.3.17-RXN Rhea MetaCyc REACTION RHEA:20915 Rhea reaction 1 1 1 1 1 1 KEGG:R06306 METACYC:1.14.99.37-RXN RHEA:14052 reaction UPa:UCR06306 O(2) + reduced acceptor + taxa-4,11-diene = H(2)O + acceptor + taxa-4(20),11-dien-5alpha-ol 1 LR 1 KEGG:R06306 KEGG reaction METACYC:1.14.99.37-RXN MetaCyc MetaCyc REACTION RHEA:14052 Rhea reaction 1 1 1 1 KEGG:R06307 METACYC:2.3.1.162-RXN RHEA:22031 reaction UPa:UCR06307 acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate 1 LR 1 KEGG:R06307 KEGG reaction METACYC:2.3.1.162-RXN Rhea MetaCyc REACTION RHEA:22031 Rhea reaction 1 1 1 1 1 1 1 KEGG:R06309 METACYC:1.14.13.76-RXN RHEA:15244 reaction UPa:UCR06309 H(+) + NADPH + O(2) + taxa-4(20),11-dien-5alpha-yl acetate = 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + H(2)O + NADP(+) 1 LR 1 KEGG:R06309 KEGG reaction METACYC:1.14.13.76-RXN MetaCyc MetaCyc REACTION RHEA:15244 Rhea reaction 1 1 1 1 KEGG:R06310 METACYC:2.3.1.166-RXN RHEA:18744 reaction UPa:UCR06310 10-deacetyl-2-debenzoylbaccatin III + benzoyl-CoA = 10-deacetylbaccatin III + CoA 1 LR 1 KEGG:R06310 KEGG reaction METACYC:2.3.1.166-RXN MetaCyc MetaCyc REACTION RHEA:18744 Rhea reaction 1 1 1 1 KEGG:R06311 METACYC:2.3.1.167-RXN RHEA:20140 reaction UPa:UCR06311 10-deacetylbaccatin III + acetyl-CoA = CoA + baccatin III 1 LR 1 KEGG:R06311 KEGG reaction METACYC:2.3.1.167-RXN MetaCyc MetaCyc REACTION RHEA:20140 Rhea reaction 1 1 1 1 KEGG:R06372 METACYC:RXN-9419 RHEA:32430 reaction UPa:UCR06372 (S)-carvone + reduced acceptor = (1R,4S)-isodihydrocarvone + acceptor 1 LR 1 KEGG:R06372 KEGG reaction METACYC:RXN-9419 MetaCyc MetaCyc REACTION RHEA:32430 Rhea reaction 1 1 1 1 1 1 1 KEGG:R06398 RHEA:26096 reaction UPa:UCR06398 (4R)-limonene + H(+) + NADH + O(2) = (4R)-limonene 1,2-epoxide + H(2)O + NAD(+) 1 LR 1 KEGG:R06398 KEGG reaction RHEA:26096 Rhea reaction 1 1 1 1 1 KEGG:R06399 METACYC:RXN-9949 RHEA:32386 reaction UPa:UCR06399 (1S,2S,4R)-limonene-1,2-diol + NAD(+) = (1S,4R)-1-hydroxylimonen-2-one + H(+) + NADH 1 LR 1 KEGG:R06399 KEGG reaction METACYC:RXN-9949 Rhea MetaCyc REACTION RHEA:32386 Rhea reaction 1 1 1 1 KEGG:R06558 METACYC:RXN-14063 RHEA:15768 reaction UPa:UCR06558 GTP + adenosylcobinamide = GDP + adenosylcobinamide phosphate 1 LR 1 KEGG:R06558 KEGG reaction METACYC:RXN-14063 MetaCyc Rhea MetaCyc REACTION RHEA:15768 Rhea reaction 1 1 1 KEGG:R06601 METACYC:3.5.2.17-RXN RHEA:23739 reaction UPa:UCR06601 5-hydroxyisouric acid + H(2)O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylic acid 1 LR 1 KEGG:R06601 KEGG reaction METACYC:3.5.2.17-RXN MetaCyc MetaCyc REACTION RHEA:23739 Rhea reaction 1 1 1 KEGG:R06604 METACYC:RXN-6201 reaction UPa:UCR06604 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylic acid = (S)-allantoin + CO(2) 1 LR 1 KEGG:R06604 KEGG reaction METACYC:RXN-6201 MetaCyc MetaCyc REACTION 1 1 1 1 1 1 KEGG:R06782 METACYC:HCAMULTI-RXN RHEA:20360 reaction UPa:UCR06782 3-phenylpropanoate + H(+) + NADH + O(2) = NAD(+) + cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol 1 LR 1 KEGG:R06782 KEGG reaction METACYC:HCAMULTI-RXN Rhea MetaCyc REACTION RHEA:20360 Rhea reaction 1 1 1 1 1 KEGG:R06784 METACYC:PHENPRODIOLDEHYDROG-RXN RHEA:25065 reaction UPa:UCR06784 NAD(+) + cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol = 3-(2,3-dihydroxyphenyl)propanoate + H(+) + NADH 1 LR 1 KEGG:R06784 KEGG reaction METACYC:PHENPRODIOLDEHYDROG-RXN Rhea MetaCyc REACTION RHEA:25065 Rhea reaction 1 1 1 1 1 1 1 KEGG:R06786 METACYC:MHPHYDROXY-RXN RHEA:24788 reaction UPa:UCR06786 3-(3-hydroxyphenyl)propanoate + H(+) + NADH + O(2) = 3-(2,3-dihydroxyphenyl)propanoate + H(2)O + NAD(+) 1 LR 1 KEGG:R06786 KEGG reaction METACYC:MHPHYDROXY-RXN Rhea MetaCyc REACTION RHEA:24788 Rhea reaction 1 1 1 1 KEGG:R06836 METACYC:RXN0-1401 RHEA:20112 reaction UPa:UCR06836 ATP + D-ribose 1,5-bisphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + ADP 1 LR 1 KEGG:R06836 KEGG reaction METACYC:RXN0-1401 Rhea MetaCyc REACTION RHEA:20112 Rhea reaction 1 1 KEGG:R06837 reaction UPa:UCR06837 alpha-D-ribose 1-phosphate = D-ribose 1,5-bisphosphate 1 LR 1 KEGG:R06837 KEGG reaction 1 1 1 1 KEGG:R06868 METACYC:RXN-5642 RHEA:25324 reaction UPa:UCR06868 N-methylethanolamine phosphate + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + phosphodimethylethanolamine 1 LR 2 KEGG:R06868 KEGG reaction METACYC:RXN-5642 MetaCyc MetaCyc REACTION RHEA:25324 Rhea reaction 1 1 1 1 KEGG:R06869 METACYC:RXN-5643 RHEA:25328 reaction UPa:UCR06869 S-adenosyl-L-methionine + phosphodimethylethanolamine = S-adenosyl-L-homocysteine + phosphocholine 1 LR 3 KEGG:R06869 KEGG reaction METACYC:RXN-5643 MetaCyc MetaCyc REACTION RHEA:25328 Rhea reaction 1 1 1 1 1 1 KEGG:R06895 METACYC:HEMN-RXN RHEA:15428 reaction UPa:UCR06895 2 S-adenosyl-L-methionine + coproporphyrinogen-III = 2 5'-deoxyadenosine + 2 CO(2) + 2 L-methionine + protoporphyrinogen-IX 1 LR 1 KEGG:R06895 KEGG reaction METACYC:HEMN-RXN MetaCyc MetaCyc REACTION RHEA:15428 Rhea reaction 1 1 1 KEGG:R06897 RHEA:42075 reaction UPa:UCR06897 2-hydroxy-hept-2,4-diene-1,7-dioic acid + H(2)O = 2,4-dihydroxyhept-2-enedioic acid 1 LR 1 KEGG:R06897 KEGG reaction RHEA:42075 Rhea reaction 1 1 1 1 1 1 KEGG:R06974 METACYC:GARTRANSFORMYL2-RXN RHEA:24832 reaction UPa:UCR06974 ATP + N(1)-(5-phospho-D-ribosyl)glycinamide + formate = ADP + N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide + phosphate 1 LR 1 KEGG:R06974 KEGG reaction METACYC:GARTRANSFORMYL2-RXN MetaCyc MetaCyc REACTION RHEA:24832 Rhea reaction 1 1 1 1 1 1 KEGG:R06975 METACYC:RXN-10066 RHEA:24839 reaction UPa:UCR06975 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + ATP + formate = 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide + ADP + phosphate 1 LR 1 KEGG:R06975 KEGG reaction METACYC:RXN-10066 Rhea MetaCyc REACTION RHEA:24839 Rhea reaction 1 1 1 1 KEGG:R06977 METACYC:R101-RXN RHEA:11163 reaction UPa:UCR06977 L-aspartate 4-semialdehyde + L-glutamate = 2-oxoglutarate + L-2,4-diaminobutanoate 1 1 LR 1 LR 1 KEGG:R06977 KEGG reaction METACYC:R101-RXN Rhea MetaCyc REACTION RHEA:11163 Rhea reaction 1 1 1 1 KEGG:R06978 METACYC:R102-RXN RHEA:16904 reaction UPa:UCR06978 L-2,4-diaminobutanoate + acetyl-CoA = CoA + N(4)-acetyl-L-2,4-diaminobutyric acid 1 LR 1 KEGG:R06978 KEGG reaction METACYC:R102-RXN Rhea MetaCyc REACTION RHEA:16904 Rhea reaction 1 1 1 KEGG:R06979 METACYC:R103-RXN RHEA:17284 reaction UPa:UCR06979 N(4)-acetyl-L-2,4-diaminobutyric acid = H(2)O + L-ectoine 1 LR 1 KEGG:R06979 KEGG reaction METACYC:R103-RXN Rhea MetaCyc REACTION RHEA:17284 Rhea reaction 1 1 1 KEGG:R06982 METACYC:RXN-2961 RHEA:22491 reaction UPa:UCR06982 formaldehyde + glutathione = S-(hydroxymethyl)glutathione 1 LR 1 KEGG:R06982 KEGG reaction METACYC:RXN-2961 MetaCyc MetaCyc REACTION RHEA:22491 Rhea reaction 1 1 1 1