{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# TITLE" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### Objective" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "::**DESCRIPTION OF OBJECTIVE**::" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### Environment Setup" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Configure notebook style (see NBCONFIG.ipynb), add imports and paths. The **%run** magic used below **requires IPython 2.0 or higher.**" ] }, { "cell_type": "code", "execution_count": 3, "metadata": { "collapsed": false }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Populating the interactive namespace from numpy and matplotlib\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ "WARNING: pylab import has clobbered these variables: ['plotting']\n", "`%matplotlib` prevents importing * from pylab and numpy\n" ] }, { "data": { "text/html": [ "" ], "text/plain": [ "" ] }, "metadata": {}, "output_type": "display_data" } ], "source": [ "%run NBCONFIG.ipynb" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "#### Step 1: ::Description Step 1::" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Explanation of step 1" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "collapsed": false }, "outputs": [], "source": [] }, { "cell_type": "code", "execution_count": null, "metadata": { "collapsed": false }, "outputs": [], "source": [] }, { "cell_type": "code", "execution_count": 3, "metadata": { "collapsed": false }, "outputs": [], "source": [] }, { "cell_type": "markdown", "metadata": {}, "source": [ "
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This notebook is free for redistribution. If citing, please reference as:

\n", "- *Hughes, A. (2012). [A Computational Framework for Plasmonic Nanobiosensing](https://www.researchgate.net/publication/236672995_A_Computational_Framework_for_Plasmonic_Nanobiosensing). Python in Science Conference [SCIPY].* \n", "\n", "\n", "

Questions or Feedback?

\n", "\n", "* skspec@groups.google.com\n", "* hugadams@gwmail.gwu.edu \n", "* twitter: @hughesadam87\n", "* Mark Reeves Biophysics Group\n", "\n", "\n", "\n", "\n", "

References:

\n", "\n", "* [1] : **REF 1**\n", "* [2] : **REF 2**\n", "\n", "\n", "\n", "\n", "\n", "

Related:

\n", "\n", " * scikit-spectra: Exploratory Spectral Data Analysis\n", " * pyparty: Image Analysis of Particles\n", " * Lorena A. Barba (GWU Engineering)\n", " * xray: extended arrays for scientific datasets\n", "\n", "\n", "\n", "

Notebook styling ideas:

\n", "\n", "* Louic's web blog\n", "* Plotly\n", "* Publication-ready the first time: Beautiful, reproducible plots with Matplotlib\n", "\n", "
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