{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Introduction to _py2cytoscape_: Pythonista-friendly wrapper for cyREST\n", "\n", "![](http://cl.ly/XohP/logo300.png)\n", "\n", "
\n", " | alias | \n", "annotation.DB_Object_Name | \n", "annotation.GO BIOLOGICAL_PROCESS | \n", "annotation.GO CELLULAR_COMPONENT | \n", "annotation.GO MOLECULAR_FUNCTION | \n", "label | \n", "kegg | \n", "uniprot | \n", "sgd | \n", "entrez | \n", "
---|---|---|---|---|---|---|---|---|---|---|
YAL003W | \n", "translation elongation factor EF-1beta, EF-1 b... | \n", "EF-1 beta, translation elongation factor EF-1beta | \n", "translational elongation | \n", "eukaryotic translation elongation factor 1 com... | \n", "translation elongation factor activity | \n", "EF1B | \n", "sce:YAL003W | \n", "EF1B_YEAST | \n", "S000000003 | \n", "851260 | \n", "
YAL030W | \n", "S000000028, SNC1 | \n", "NaN | \n", "Golgi to plasma membrane transport, endocytosi... | \n", "Golgi trans face, SNARE complex, endosome, tra... | \n", "v-SNARE activity | \n", "SNC1 | \n", "sce:YAL030W | \n", "SNC1_YEAST | \n", "S000000028 | \n", "851203 | \n", "
YAL038W | \n", "CDC19, PYK1, S000000036, pyruvate kinase | \n", "pyruvate kinase | \n", "glycolysis, pyruvate metabolic process | \n", "cytosol | \n", "pyruvate kinase activity | \n", "KPYK1 | \n", "sce:YAL038W | \n", "KPYK1_YEAST | \n", "S000000036 | \n", "851193 | \n", "
YAL040C | \n", "CLN3, DAF1, FUN10, G1 cyclin, S000000038, WHI1 | \n", "G1 cyclin | \n", "G1/S transition of mitotic cell cycle, regulat... | \n", "nucleus | \n", "cyclin-dependent protein kinase regulator acti... | \n", "CG13 | \n", "sce:YAL040C | \n", "CG13_YEAST | \n", "S000000038 | \n", "851191 | \n", "
YAR007C | \n", "heterotrimeric RPA (RF-A) single-stranded DNA ... | \n", "RF-A, heterotrimeric RPA (RF-A) single-strande... | \n", "DNA recombination, DNA replication, synthesis ... | \n", "DNA replication factor A complex, chromosome, ... | \n", "damaged DNA binding, single-stranded DNA binding | \n", "RFA1 | \n", "sce:YAR007C | \n", "RFA1_YEAST | \n", "S000000065 | \n", "851266 | \n", "