<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/ido.owl#"
xml:base="http://purl.obolibrary.org/obo/ido.owl"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/ido-covid-19.owl">
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/2020-21-07/ido-covid-19.owl"/>
<protege:defaultLanguage>en</protege:defaultLanguage>
<dc:contributor>Gustavo Carvalho</dc:contributor>
<dc:contributor>Regina Hurley</dc:contributor>
<dc:contributor>Sebastian Deusing</dc:contributor>
<dc:contributor>Shane Babcock</dc:contributor>
<dc:creator>Barry Smith</dc:creator>
<dc:creator>John Beverley</dc:creator>
<dc:license rdf:resource="http://creativecommons.org/licenses/by/3.0/"/>
<rdfs:comment xml:lang="en">The COVID-19 Infectious Disease Ontology (IDO-COVID-19) is an extension of the Infectious Disease Ontology (IDO) and the Virus Infectious Disease Ontology (VIDO). IDO Virus follows OBO Foundry guidelines, employs the Basic Formal Ontology as its starting point, and covers epidemiology, classification, pathogenesis, and treatment of terms used to represent infection by the SARS-CoV-2 virus strain, and the associated COVID-19 disease. Other terms are defined as cross-products of terms from Foundry ontologies to the extent possible.</rdfs:comment>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://protege.stanford.edu/plugins/owl/protege#defaultLanguage -->
<owl:AnnotationProperty rdf:about="http://protege.stanford.edu/plugins/owl/protege#defaultLanguage"/>
<!-- http://purl.obolibrary.org/obo/BFO_0000179 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000179">
<obo:IAO_0000115 xml:lang="en">Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification.</obo:IAO_0000115>
<obo:IAO_0000232 xml:lang="en">Really of interest to developers only</obo:IAO_0000232>
<rdfs:label xml:lang="en">BFO OWL specification label</rdfs:label>
<rdfs:subPropertyOf rdf:resource="http://www.w3.org/2000/01/rdf-schema#label"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000180 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000180">
<obo:IAO_0000115 xml:lang="en">Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2</obo:IAO_0000115>
<obo:IAO_0000119>Person:Alan Ruttenberg</obo:IAO_0000119>
<obo:IAO_0000232 xml:lang="en">Really of interest to developers only</obo:IAO_0000232>
<rdfs:label xml:lang="en">BFO CLIF specification label</rdfs:label>
<rdfs:subPropertyOf rdf:resource="http://www.w3.org/2000/01/rdf-schema#label"/>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000111 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111">
<obo:IAO_0000111 xml:lang="en">editor preferred term</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">editor preferred term</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000112 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112">
<obo:IAO_0000111 xml:lang="en">example</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">example of usage</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000113 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000113">
<obo:IAO_0000111 xml:lang="en">in branch</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">GROUP:OBI</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">OBI_0000277</obo:IAO_0000119>
<rdfs:label xml:lang="en">in branch</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000114 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114">
<obo:IAO_0000111 xml:lang="en">has curation status</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Bill Bug</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">OBI_0000281</obo:IAO_0000119>
<rdfs:label xml:lang="en">has curation status</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115">
<obo:IAO_0000111 xml:lang="en">definition</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">2012-04-05:
Barry Smith
The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible.
Can you fix to something like:
A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property.
Alan Ruttenberg
Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria.
On the specifics of the proposed definition:
We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition.
Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable.
We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. </obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>definition</rdfs:label>
<rdfs:label xml:lang="en">definition</rdfs:label>
<rdfs:label>textual definition</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000116 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000116">
<obo:IAO_0000111 xml:lang="en">editor note</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obfoundry.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">editor note</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000117 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117">
<obo:IAO_0000111 xml:lang="en">term editor</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">20110707, MC: label update to term editor and definition modified accordingly. See https://github.com/information-artifact-ontology/IAO/issues/115.</obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">term editor</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000118 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118">
<obo:IAO_0000111 xml:lang="en">alternative term</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent)</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">alternative term</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000119 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119">
<obo:IAO_0000111 xml:lang="en">definition source</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w</obo:IAO_0000119>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">definition source</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000231 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000231">
<obo:IAO_0000111 xml:lang="en">has obsolescence reason</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</obo:IAO_0000117>
<rdfs:label xml:lang="en">has obsolescence reason</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000232 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000232">
<obo:IAO_0000111 xml:lang="en">curator note</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">An administrative note of use for a curator but of no use for a user</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">curator note</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000233 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000233">
<obo:IAO_0000111>term tracker item</obo:IAO_0000111>
<obo:IAO_0000112>the URI for an OBI Terms ticket at sourceforge, such as https://sourceforge.net/p/obi/obi-terms/772/</obo:IAO_0000112>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115>An IRI or similar locator for a request or discussion of an ontology term.</obo:IAO_0000115>
<obo:IAO_0000117>Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119>Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg</obo:IAO_0000119>
<rdfs:comment>The 'tracker item' can associate a tracker with a specific ontology term.</rdfs:comment>
<rdfs:label xml:lang="en">term tracker item</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000234 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000234">
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115>The name of the person, project, or organization that motivated inclusion of an ontology term by requesting its addition.</obo:IAO_0000115>
<obo:IAO_0000117>Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119>Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg</obo:IAO_0000119>
<rdfs:comment>The 'term requester' can credit the person, organization or project who request the ontology term.</rdfs:comment>
<rdfs:label xml:lang="en">ontology term requester</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000411 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000411">
<obo:IAO_0000111 xml:lang="en">is denotator type</obo:IAO_0000111>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">relates an class defined in an ontology, to the type of it's denotator</obo:IAO_0000115>
<obo:IAO_0000116 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">In OWL 2 add AnnotationPropertyRange('is denotator type' 'denotator type')</obo:IAO_0000116>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">is denotator type</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000412 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000412">
<obo:IAO_0000111 xml:lang="en">imported from</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">For external terms/classes, the ontology from which the term was imported</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">imported from</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000424 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000424">
<obo:IAO_0000111 xml:lang="en">expand expression to</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">ObjectProperty: RO_0002104
Label: has plasma membrane part
Annotations: IAO_0000424 "http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.org/obo/owl/GO#GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)"
</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Chris Mungall</obo:IAO_0000117>
<rdfs:label xml:lang="en">expand expression to</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000425 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000425">
<obo:IAO_0000111 xml:lang="en">expand assertion to</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">ObjectProperty: RO???
Label: spatially disjoint from
Annotations: expand_assertion_to "DisjointClasses: (http://purl.obolibrary.org/obo/BFO_0000051 some ?X) (http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)"
</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Chris Mungall</obo:IAO_0000117>
<rdfs:label xml:lang="en">expand assertion to</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000426 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000426">
<obo:IAO_0000111 xml:lang="en">first order logic expression</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label xml:lang="en">first order logic expression</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000427 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000427">
<obo:IAO_0000111 xml:lang="en">antisymmetric property</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">part_of antisymmetric property xsd:true</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">use boolean value xsd:true to indicate that the property is an antisymmetric property</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label xml:lang="en">antisymmetric property</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000589 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000589">
<obo:IAO_0000111 xml:lang="en">OBO foundry unique label</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">An alternative name for a class or property which is unique across the OBO Foundry.</obo:IAO_0000115>
<obo:IAO_0000116 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools .</obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Bjoern Peters</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBO Foundry <http://obofoundry.org/></obo:IAO_0000119>
<rdfs:label xml:lang="en">OBO foundry unique label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000596 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000596">
<obo:IAO_0000112>Ontology: <http://purl.obolibrary.org/obo/ro/idrange/>
Annotations:
'has ID prefix': "http://purl.obolibrary.org/obo/RO_"
'has ID digit count' : 7,
rdfs:label "RO id policy"
'has ID policy for': "RO"</obo:IAO_0000112>
<obo:IAO_0000115>Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix" annotation property value concatenated with an integer in the id range (left padded with "0"s to make this many digits)</obo:IAO_0000115>
<obo:IAO_0000117>Person:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label xml:lang="en">has ID digit count</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000597 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000597">
<obo:IAO_0000112>Datatype: idrange:1
Annotations: 'has ID range allocated to': "Chris Mungall"
EquivalentTo: xsd:integer[> 2151 , <= 2300]
</obo:IAO_0000112>
<obo:IAO_0000115>Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms</obo:IAO_0000115>
<obo:IAO_0000117>Person:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label xml:lang="en">has ID range allocated to</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000598 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000598">
<obo:IAO_0000112>Ontology: <http://purl.obolibrary.org/obo/ro/idrange/>
Annotations:
'has ID prefix': "http://purl.obolibrary.org/obo/RO_"
'has ID digit count' : 7,
rdfs:label "RO id policy"
'has ID policy for': "RO"</obo:IAO_0000112>
<obo:IAO_0000115>Relating an ontology used to record id policy to the ontology namespace whose policy it manages</obo:IAO_0000115>
<obo:IAO_0000117>Person:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label>has ID policy for</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000599 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000599">
<obo:IAO_0000112>Ontology: <http://purl.obolibrary.org/obo/ro/idrange/>
Annotations:
'has ID prefix': "http://purl.obolibrary.org/obo/RO_"
'has ID digit count' : 7,
rdfs:label "RO id policy"
'has ID policy for': "RO"</obo:IAO_0000112>
<obo:IAO_0000115>Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with "0"s to make this many digits) to construct an ID for a term being created.</obo:IAO_0000115>
<obo:IAO_0000117>Person:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label xml:lang="en">has ID prefix</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000600 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000600">
<obo:IAO_0000111 xml:lang="en">elucidation</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Barry Smith</obo:IAO_0000119>
<obo:IAO_0000600 xml:lang="en">Primitive terms in a highest-level ontology such as BFO are terms which are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">elucidation</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000601 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000601">
<obo:IAO_0000111 xml:lang="en">has associated axiom(nl)</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000119>
<obo:IAO_0000600 xml:lang="en">An axiom associated with a term expressed using natural language</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">has associated axiom(nl)</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000602 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000602">
<obo:IAO_0000111 xml:lang="en">has associated axiom(fol)</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000119>
<obo:IAO_0000600 xml:lang="en">An axiom expressed in first order logic using CLIF syntax</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">has associated axiom(fol)</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000603 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000603">
<obo:IAO_0000111 xml:lang="en">is allocated id range</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">Add as annotation triples in the granting ontology</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">Relates an ontology IRI to an (inclusive) range of IRIs in an OBO name space. The range is give as, e.g. "IAO_0020000-IAO_0020999"</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label xml:lang="en">is allocated id range</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0010000 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0010000">
<obo:IAO_0000111 xml:lang="en">has axiom id</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000119>
<obo:IAO_0000600 xml:lang="en">A URI that is intended to be unique label for an axiom used for tracking change to the ontology. For an axiom expressed in different languages, each expression is given the same URI</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">has axiom label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0100001 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0100001">
<obo:IAO_0000111 xml:lang="en">term replaced by</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">Add as annotation triples in the granting ontology</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">Use on obsolete terms, relating the term to another term that can be used as a substitute</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000119>
<rdfs:label xml:lang="en">term replaced by</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/RO_0001900 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001900">
<rdfs:label xml:lang="en">temporal interpretation</rdfs:label>
<foaf:page rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://github.com/oborel/obo-relations/wiki/ROAndTime</foaf:page>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/elements/1.1/contributor -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/contributor"/>
<!-- http://purl.org/dc/elements/1.1/coverage -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/coverage"/>
<!-- http://purl.org/dc/elements/1.1/creator -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/creator"/>
<!-- http://purl.org/dc/elements/1.1/date -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/date"/>
<!-- http://purl.org/dc/elements/1.1/description -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/description"/>
<!-- http://purl.org/dc/elements/1.1/format -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/format"/>
<!-- http://purl.org/dc/elements/1.1/identifier -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/identifier"/>
<!-- http://purl.org/dc/elements/1.1/language -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/language"/>
<!-- http://purl.org/dc/elements/1.1/license -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/license"/>
<!-- http://purl.org/dc/elements/1.1/member -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/member"/>
<!-- http://purl.org/dc/elements/1.1/publisher -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/publisher"/>
<!-- http://purl.org/dc/elements/1.1/relation -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/relation"/>
<!-- http://purl.org/dc/elements/1.1/rights -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/rights"/>
<!-- http://purl.org/dc/elements/1.1/source -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/source"/>
<!-- http://purl.org/dc/elements/1.1/subject -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/subject"/>
<!-- http://purl.org/dc/elements/1.1/title -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/title"/>
<!-- http://purl.org/dc/elements/1.1/type -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/type"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasAlternativeId -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasAlternativeId"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDbXref -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDbXref"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDefinition -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDefinition"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasExactSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasOBONamespace -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBONamespace"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasURI -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasURI"/>
<!-- http://www.geneontology.org/formats/oboInOwl#inSubset -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset"/>
<!-- http://www.geneontology.org/formats/oboInOwl#shorthand -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#shorthand">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">shorthand</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#term_editor -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#term_editor"/>
<!-- http://www.w3.org/2000/01/rdf-schema#comment -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#comment"/>
<!-- http://www.w3.org/2000/01/rdf-schema#isDefinedBy -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#isDefinedBy"/>
<!-- http://www.w3.org/2000/01/rdf-schema#label -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#label">
<rdfs:label>label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.w3.org/2000/01/rdf-schema#seeAlso -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#seeAlso"/>
<!-- http://xmlns.com/foaf/0.1/homepage -->
<owl:AnnotationProperty rdf:about="http://xmlns.com/foaf/0.1/homepage"/>
<!-- http://xmlns.com/foaf/0.1/page -->
<owl:AnnotationProperty rdf:about="http://xmlns.com/foaf/0.1/page"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/BFO_0000050 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000050">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<obo:IAO_0000111 xml:lang="en">is part of</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">my brain is part of my body (continuant parthood, two material entities)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this day is part of this year (occurrent parthood)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a core relation that holds between a part and its whole</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.)
A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">part_of</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">part of</rdfs:label>
<rdfs:seeAlso>http://www.obofoundry.org/ro/#OBO_REL:part_of</rdfs:seeAlso>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000051 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000051">
<rdfs:subPropertyOf rdf:resource="http://www.w3.org/2002/07/owl#topObjectProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<obo:IAO_0000111 xml:lang="en">has part</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">my body has part my brain (continuant parthood, two material entities)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this year has part this day (occurrent parthood)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a core relation that holds between a whole and its part</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.)
A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_part</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">has part</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000054 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000054">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000055"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AsymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#IrreflexiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000017"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000111 xml:lang="en">realized in</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this disease is realized in this disease course</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this fragility is realized in this shattering</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this investigator role is realized in this investigation</obo:IAO_0000112>
<obo:IAO_0000118 xml:lang="en">is realized by</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">realized_in</obo:IAO_0000118>
<obo:IAO_0000600 xml:lang="en">[copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])</obo:IAO_0000600>
<rdfs:comment>Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">realized in</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000055 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000055">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AsymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#IrreflexiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000017"/>
<obo:IAO_0000111 xml:lang="en">realizes</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this disease course realizes this disease</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this investigation realizes this investigator role</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this shattering realizes this fragility</obo:IAO_0000112>
<obo:IAO_0000600 xml:lang="en">to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])</obo:IAO_0000600>
<rdfs:comment>Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">realizes</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000062 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000062">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000063"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000111 xml:lang="en">preceded by</obo:IAO_0000111>
<obo:IAO_0000116 xml:lang="en">An example is: translation preceded_by transcription; aging preceded_by development (not however death preceded_by aging). Where derives_from links classes of continuants, preceded_by links classes of processes. Clearly, however, these two relations are not independent of each other. Thus if cells of type C1 derive_from cells of type C, then any cell division involving an instance of C1 in a given lineage is preceded_by cellular processes involving an instance of C. The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">is preceded by</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">preceded_by</obo:IAO_0000118>
<dc:source>http://www.obofoundry.org/ro/#OBO_REL:preceded_by</dc:source>
<rdfs:label xml:lang="en">preceded by</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000063 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000063">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000111 xml:lang="en">precedes</obo:IAO_0000111>
<rdfs:label xml:lang="en">precedes</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000066 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000066">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000067"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:propertyChainAxiom rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000050"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000066"/>
</owl:propertyChainAxiom>
<owl:propertyChainAxiom rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000066"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000050"/>
</owl:propertyChainAxiom>
<obo:IAO_0000111 xml:lang="en">occurs in</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t</obo:IAO_0000115>
<obo:IAO_0000118 xml:lang="en">occurs_in</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">unfolds in</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">unfolds_in</obo:IAO_0000118>
<rdfs:comment>Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">occurs in</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000067 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000067">
<obo:IAO_0000111 xml:lang="en">site of</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t</obo:IAO_0000115>
<rdfs:comment>Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">contains process</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/BFO_999999 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_999999">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000008"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:comment>Not sure if this has an IRI yet, so I supplied a placeholder.</rdfs:comment>
<rdfs:label xml:lang="en">occupies temporal region</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/IDO_0000660 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IDO_0000660">
<rdfs:label xml:lang="en">results in</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/IDO_0000664 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IDO_0000664">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<rdfs:label>has_material_basis_in</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/OBI_0000293 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000293">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000295"/>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">has specified input</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/OBI_0000295 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000295">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<obo:IAO_0000115>Participates in relation between a planned process and a continuant participating in that process that is not created during the process, where the presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">is specified input of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/OBI_0000299 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000299">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">has specified output</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/OBI_0000312 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000312">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0000011"/>
<obo:IAO_0000115>Participates in relation between a planned process and a continuant participating in that process where the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">is specified output of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000052 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000052">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<obo:IAO_0000111 xml:lang="en">inheres in</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this fragility inheres in this vase</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this red color inheres in this apple</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A dependent inheres in its bearer at all times for which the dependent exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">inheres_in</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">inheres in</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000053 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000053">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<obo:IAO_0000111 xml:lang="en">bearer of</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this apple is bearer of this red color</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this vase is bearer of this fragility</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many dependents, and its dependents can exist for different periods of time, but none of its dependents can exist when the bearer does not exist.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">bearer_of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">is bearer of</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">bearer of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000056 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000056">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AsymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#IrreflexiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000111 xml:lang="en">participates in</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this blood clot participates in this blood coagulation</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this input material (or this output material) participates in this process</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this investigator participates in this investigation</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a continuant and a process, in which the continuant is somehow involved in the process</obo:IAO_0000115>
<obo:IAO_0000118 xml:lang="en">participates_in</obo:IAO_0000118>
<rdfs:label xml:lang="en">participates in</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000057 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000057">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AsymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#IrreflexiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<obo:IAO_0000111 xml:lang="en">has participant</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">this blood coagulation has participant this blood clot</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this investigation has participant this investigator</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this process has participant this input material (or this output material)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a process and a continuant, in which the continuant is somehow involved in the process</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_participant</obo:IAO_0000118>
<dc:source>http://www.obofoundry.org/ro/#OBO_REL:has_participant</dc:source>
<rdfs:label xml:lang="en">has participant</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000058 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000058">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000059"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AsymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#IrreflexiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000031"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<obo:IAO_0000112 xml:lang="en">A journal article is an information artifact that inheres in some number of printed journals. For each copy of the printed journal there is some quality that carries the journal article, such as a pattern of ink. The journal article (a generically dependent continuant) is concretized as the quality (a specifically dependent continuant), and both depend on that copy of the printed journal (an independent continuant).</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">An investigator reads a protocol and forms a plan to carry out an assay. The plan is a realizable entity (a specifically dependent continuant) that concretizes the protocol (a generically dependent continuant), and both depend on the investigator (an independent continuant). The plan is then realized by the assay (a process).</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants.</obo:IAO_0000115>
<rdfs:label xml:lang="en">is concretized as</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000059 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000059">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AsymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#IrreflexiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000031"/>
<obo:IAO_0000112 xml:lang="en">A journal article is an information artifact that inheres in some number of printed journals. For each copy of the printed journal there is some quality that carries the journal article, such as a pattern of ink. The quality (a specifically dependent continuant) concretizes the journal article (a generically dependent continuant), and both depend on that copy of the printed journal (an independent continuant).</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">An investigator reads a protocol and forms a plan to carry out an assay. The plan is a realizable entity (a specifically dependent continuant) that concretizes the protocol (a generically dependent continuant), and both depend on the investigator (an independent continuant). The plan is then realized by the assay (a process).</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.</obo:IAO_0000115>
<rdfs:label xml:lang="en">concretizes</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000079 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000079">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000085"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000034"/>
<obo:IAO_0000112 xml:lang="en">this catalysis function is a function of this enzyme</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A function inheres in its bearer at all times for which the function exists, however the function need not be realized at all the times that the function exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">function_of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">is function of</obo:IAO_0000118>
<rdfs:label xml:lang="en">function of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000080 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000080">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000086"/>
<obo:IAO_0000112 xml:lang="en">this red color is a quality of this apple</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A quality inheres in its bearer at all times for which the quality exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">is quality of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">quality_of</obo:IAO_0000118>
<rdfs:label xml:lang="en">quality of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000081 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000081">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<obo:IAO_0000112 xml:lang="en">this investigator role is a role of this person</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A role inheres in its bearer at all times for which the role exists, however the role need not be realized at all the times that the role exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">is role of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">role_of</obo:IAO_0000118>
<rdfs:label xml:lang="en">role of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000085 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000085">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000034"/>
<obo:IAO_0000112 xml:lang="en">this enzyme has function this catalysis function (more colloquially: this enzyme has this catalysis function)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many functions, and its functions can exist for different periods of time, but none of its functions can exist when the bearer does not exist. A function need not be realized at all the times that the function exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_function</obo:IAO_0000118>
<rdfs:label xml:lang="en">has function</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000086 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000086">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<obo:IAO_0000112 xml:lang="en">this apple has quality this red color</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_quality</obo:IAO_0000118>
<rdfs:label xml:lang="en">has quality</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000087 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000087">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<obo:IAO_0000112 xml:lang="en">this person has role this investigator role (more colloquially: this person has this role of investigator)</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A bearer can have many roles, and its roles can exist for different periods of time, but none of its roles can exist when the bearer does not exist. A role need not be realized at all the times that the role exists.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has_role</obo:IAO_0000118>
<rdfs:label xml:lang="en">has role</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000091 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000091">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000092"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<obo:IAO_0000115 xml:lang="en">a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence</obo:IAO_0000115>
<rdfs:label xml:lang="en">has disposition</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0000092 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000092">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<rdfs:label xml:lang="en">disposition of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0001000 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001000">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0001001"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000112 xml:lang="en">this cell derives from this parent cell (cell division)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this nucleus derives from this parent nucleus (nuclear division)</obo:IAO_0000112>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops from'.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">derives_from</obo:IAO_0000118>
<rdfs:label xml:lang="en">derives from</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0001001 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001001">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000112 xml:lang="en">this parent cell derives into this cell (cell division)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this parent nucleus derives into this nucleus (nuclear division)</obo:IAO_0000112>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops into'. To avoid making statements about a future that may not come to pass, it is often better to use the backward-looking 'derives from' rather than the forward-looking 'derives into'.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">derives_into</obo:IAO_0000118>
<rdfs:label xml:lang="en">derives into</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0001015 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001015">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<obo:IAO_0000111 xml:lang="en">is location of</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">my head is the location of my brain</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this cage is the location of this rat</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between two independent continuants, the location and the target, in which the target is entirely within the location</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">Most location relations will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">location_of</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">location of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0001025 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001025">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<obo:IAO_0000111 xml:lang="en">located in</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">my brain is located in my head</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">this rat is located in this cage</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between two independent continuants, the target and the location, in which the target is entirely within the location</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">Location as a relation between instances: The primitive instance-level relation c located_in r at t reflects the fact that each continuant is at any given time associated with exactly one spatial region, namely its exact location. Following we can use this relation to define a further instance-level location relation - not between a continuant and the region which it exactly occupies, but rather between one continuant and another. c is located in c1, in this sense, whenever the spatial region occupied by c is part_of the spatial region occupied by c1. Note that this relation comprehends both the relation of exact location between one continuant and another which obtains when r and r1 are identical (for example, when a portion of fluid exactly fills a cavity), as well as those sorts of inexact location relations which obtain, for example, between brain and head or between ovum and uterus</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Most location relations will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">located_in</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<dc:source>http://www.obofoundry.org/ro/#OBO_REL:located_in</dc:source>
<rdfs:label xml:lang="en">located in</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002000 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002000">
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002002"/>
<obo:IAO_0000112 xml:lang="en">the surface of my skin is a 2D boundary of my body</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A 2D boundary may have holes and gaps, but it must be a single connected entity, not an aggregate of several disconnected parts.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Although the boundary is two-dimensional, it exists in three-dimensional space and thus has a 3D shape.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">2D_boundary_of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">boundary of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">is 2D boundary of</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">is boundary of</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">2D boundary of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002002 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002002">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000141"/>
<obo:IAO_0000112 xml:lang="en">my body has 2D boundary the surface of my skin</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">A 2D boundary may have holes and gaps, but it must be a single connected entity, not an aggregate of several disconnected parts.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Although the boundary is two-dimensional, it exists in three-dimensional space and thus has a 3D shape.</obo:IAO_0000116>
<obo:IAO_0000118 xml:lang="en">has boundary</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">has_2D_boundary</obo:IAO_0000118>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">has 2D boundary</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002211 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002211">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115>x regulates y if and only if the x is the realization of a function to exert an effect on the frequency, rate or extent of y</obo:IAO_0000115>
<obo:IAO_0000116>We use 'regulates' here to specifically imply control. However, many colloquial usages of the term correctly correspond to the weaker relation of 'causally upstream of or within' (aka influences). Consider relabeling to make things more explicit</obo:IAO_0000116>
<obo:IAO_0000117>Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000117>David Hill</obo:IAO_0000117>
<obo:IAO_0000117>Tanya Berardini</obo:IAO_0000117>
<obo:IAO_0000119 rdf:resource="http://purl.obolibrary.org/obo/ro/docs/causal-relations"/>
<obo:IAO_0000119>GO</obo:IAO_0000119>
<obo:IAO_0000232>Regulation precludes parthood; the regulatory process may not be within the regulated process.</obo:IAO_0000232>
<obo:IAO_0000589>regulates (processual)</obo:IAO_0000589>
<obo:IAO_0000600 rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">false</obo:IAO_0000600>
<rdfs:label xml:lang="en">regulates</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002212 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002212">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002211"/>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115>x negatively regulates y if and only if the progression of x reduces the frequency, rate or extent of y</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000119 rdf:resource="http://purl.obolibrary.org/obo/ro/docs/causal-relations"/>
<obo:IAO_0000589>negatively regulates (process to process)</obo:IAO_0000589>
<rdfs:label xml:lang="en">negatively regulates</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002213 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002213">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002211"/>
<obo:IAO_0000115>x positively regulates y if and only if the progression of x increases the frequency, rate or extent of y</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000119 rdf:resource="http://purl.obolibrary.org/obo/ro/docs/causal-relations"/>
<obo:IAO_0000589>positively regulates (process to process)</obo:IAO_0000589>
<rdfs:label xml:lang="en">positively regulates</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002234 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002234">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115>p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.</obo:IAO_0000115>
<obo:IAO_0000117>Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000118>produces</obo:IAO_0000118>
<rdfs:label xml:lang="en">has output</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002297 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002297">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000660"/>
<obo:IAO_0000112>an annotation of gene X to anatomical structure formation with results_in_formation_of UBERON:0000007 (pituitary gland) means that at the beginning of the process a pituitary gland does not exist and at the end of the process a pituitary gland exists.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">every "endocardial cushion formation" (GO:0003272) results_in_formation_of some "endocardial cushion" (UBERON:0002062)</obo:IAO_0000112>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000117>Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000119>GOC:mtg_berkeley_2013</obo:IAO_0000119>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">results_in_formation_of</oboInOwl:shorthand>
<rdfs:label xml:lang="en">results in formation of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002350 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002350">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002351"/>
<obo:IAO_0000112>An organism that is a member of a population of organisms</obo:IAO_0000112>
<obo:IAO_0000115>is member of is a mereological relation between a item and a collection.</obo:IAO_0000115>
<obo:IAO_0000118>is member of</obo:IAO_0000118>
<obo:IAO_0000118>member part of</obo:IAO_0000118>
<obo:IAO_0000119>SIO</obo:IAO_0000119>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">member of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002351 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002351">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#IrreflexiveProperty"/>
<obo:IAO_0000115>has member is a mereological relation between a collection and an item.</obo:IAO_0000115>
<obo:IAO_0000119>SIO</obo:IAO_0000119>
<obo:RO_0001900 rdf:resource="http://purl.obolibrary.org/obo/RO_0001901"/>
<rdfs:label xml:lang="en">has member</rdfs:label>
</owl:ObjectProperty>
<!-- http://www.w3.org/2002/07/owl#topObjectProperty -->
<owl:ObjectProperty rdf:about="http://www.w3.org/2002/07/owl#topObjectProperty"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/VIDO_0001123 -->
<owl:Class rdf:about="http://purl.obolibrary.org/VIDO_0001123">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000436"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001122"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001122"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001120"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001122"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001122"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Infectious disease inhering in a virus disorder that is a disorder due to the presence of the virus.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viral disease</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000075 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000075">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000005"/>
<obo:IAO_0000115>Objective specification that is realized by processes that are able or likely to stop the spread of a disease in a population.</obo:IAO_0000115>
<rdfs:comment>http://purl.obolibrary.org/obo/apollo-sv.owl</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease control objective specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000086 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000086">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000104"/>
<obo:IAO_0000115>Plan specification whose objective specification is an infectious disease control objective specification.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/apollo-sv.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious disease control strategy</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000174 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000174">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000064"/>
<obo:IAO_0000115>Algorithm that models the progress of a transmissible disease in a population.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/apollo-sv.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">disease transmission model</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000229 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000229">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/APOLLO_SV_00000086"/>
<obo:IAO_0000115>Infectious disease control strategy that has an action specification that is realized in closing facilities where organisms congregate during times when the facilities normally would be open.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/apollo-sv.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">place closure control strategy</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000230 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000230">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/APOLLO_SV_00000086"/>
<obo:IAO_0000115>Infectious disease control strategy that has an action specification that is realized in isolating organsims who are infectious.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/apollo-sv.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">case isolation control strategy</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000308 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000308">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/APOLLO_SV_00000086"/>
<obo:IAO_0000115>Infectious disease control strategy that has a vector control action specification as part.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/apollo-sv.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">vector control strategy</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000327 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000327">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/APOLLO_SV_00000086"/>
<obo:IAO_0000115>Infectious disease control strategy whereby organisms who have had contact with infectious organisms but are not symptomatic or otherwise known to be infectious are prevented from having contact with other susceptible organisms.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/apollo-sv.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">quarantine control strategy</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000541 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000541">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000005"/>
<obo:IAO_0000115>Objective specification whose endpoint is human awareness of the level of a particular disease in a particular population of a given biological taxon during some time interval.</obo:IAO_0000115>
<rdfs:comment>http://purl.obolibrary.org/obo/apollo-sv.owl</rdfs:comment>
<rdfs:label xml:lang="en">disease surveillance objective specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/APOLLO_SV_00000550 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/APOLLO_SV_00000550">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/APOLLO_SV_00000086"/>
<obo:IAO_0000115>Infectious disease control strategy that identifies and treats contacted organisms in a host population.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/apollo-sv.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">contact tracing</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/BFO_0000001 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000001">
<rdfs:subClassOf rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
<obo:BFO_0000179>entity</obo:BFO_0000179>
<obo:BFO_0000180>Entity</obo:BFO_0000180>
<obo:IAO_0000112 xml:lang="en">Julius Caesar</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">Verdi’s Requiem</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the Second World War</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">your body mass index</obo:IAO_0000112>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf</obo:IAO_0000116>
<obo:IAO_0000600 xml:lang="en">An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">entity</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000001"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000116"/>
<owl:annotatedTarget xml:lang="en">Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/0000004"/>
<rdfs:comment>per discussion with Barry Smith</rdfs:comment>
<rdfs:seeAlso rdf:resource="http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000001"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/001-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000002 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000002">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000001"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<owl:disjointWith>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
</owl:Restriction>
</owl:disjointWith>
<obo:BFO_0000179>continuant</obo:BFO_0000179>
<obo:BFO_0000180>Continuant</obo:BFO_0000180>
<obo:IAO_0000115 xml:lang="en">An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants</obo:IAO_0000116>
<obo:IAO_0000600 xml:lang="en">A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])</obo:IAO_0000600>
<obo:IAO_0000601 xml:lang="en">if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])</obo:IAO_0000601>
<obo:IAO_0000601 xml:lang="en">if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])</obo:IAO_0000601>
<obo:IAO_0000601 xml:lang="en">if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])</obo:IAO_0000601>
<obo:IAO_0000602>(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] </obo:IAO_0000602>
<obo:IAO_0000602>(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] </obo:IAO_0000602>
<obo:IAO_0000602>(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] </obo:IAO_0000602>
<obo:IAO_0000602>(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">continuant</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000116"/>
<owl:annotatedTarget xml:lang="en">Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/0000007"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/008-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/126-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/009-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/011-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/009-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/126-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/008-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/011-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000003 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000003">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000001"/>
<owl:disjointWith>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
</owl:Restriction>
</owl:disjointWith>
<obo:IAO_0000115 xml:lang="en">An entity that has temporal parts and that happens, unfolds or develops through time.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players.</obo:IAO_0000116>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">occurrent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/BFO_0000004 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000004">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000031"/>
<obo:BFO_0000179>ic</obo:BFO_0000179>
<obo:BFO_0000180>IndependentContinuant</obo:BFO_0000180>
<obo:IAO_0000112 xml:lang="en">a chair</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a heart</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a leg</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a molecule</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a spatial region</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an atom</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an orchestra.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an organism</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the bottom right portion of a human torso</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the interior of your mouth</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])</obo:IAO_0000115>
<obo:IAO_0000601 xml:lang="en">For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])</obo:IAO_0000601>
<obo:IAO_0000601 xml:lang="en">For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])</obo:IAO_0000601>
<obo:IAO_0000602>(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] </obo:IAO_0000602>
<obo:IAO_0000602>(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] </obo:IAO_0000602>
<obo:IAO_0000602>(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">independent continuant</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget xml:lang="en">b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/017-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/134-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/018-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/134-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/018-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/017-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000006 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000006">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000141"/>
<obo:BFO_0000179>s-region</obo:BFO_0000179>
<obo:BFO_0000180>SpatialRegion</obo:BFO_0000180>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: Spatial regions do not participate in processes.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional.</obo:IAO_0000116>
<obo:IAO_0000600 xml:lang="en">A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001])</obo:IAO_0000600>
<obo:IAO_0000601 xml:lang="en">All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001])</obo:IAO_0000601>
<obo:IAO_0000602>(forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001] </obo:IAO_0000602>
<obo:IAO_0000602>(forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">spatial region</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000116"/>
<owl:annotatedTarget xml:lang="en">Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional.</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/0000002"/>
<rdfs:comment>per discussion with Barry Smith</rdfs:comment>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/035-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/036-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/036-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/035-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000008 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000008">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000601 xml:lang="en">Every temporal region t is such that t occupies_temporal_region t. (axiom label in BFO2 Reference: [119-002])</obo:IAO_0000601>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">temporal region</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000008"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">Every temporal region t is such that t occupies_temporal_region t. (axiom label in BFO2 Reference: [119-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/119-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000009 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000009">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<obo:BFO_0000179>2d-s-region</obo:BFO_0000179>
<obo:BFO_0000180>TwoDimensionalSpatialRegion</obo:BFO_0000180>
<obo:IAO_0000112 xml:lang="en">an infinitely thin plane in space.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the surface of a sphere-shaped part of space</obo:IAO_0000112>
<obo:IAO_0000600 xml:lang="en">A two-dimensional spatial region is a spatial region that is of two dimensions. (axiom label in BFO2 Reference: [039-001])</obo:IAO_0000600>
<obo:IAO_0000602>(forall (x) (if (TwoDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [039-001] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">two-dimensional spatial region</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000009"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A two-dimensional spatial region is a spatial region that is of two dimensions. (axiom label in BFO2 Reference: [039-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/039-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000009"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (TwoDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [039-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/039-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000011 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000011">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000112 xml:lang="en">the spatiotemporal region occupied by a human life</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the spatiotemporal region occupied by a process of cellular meiosis.</obo:IAO_0000112>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">spatiotemporal region</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/BFO_0000015 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000015">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000112 xml:lang="en">a process of cell-division, \ a beating of the heart</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a process of meiosis</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a process of sleeping</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the course of a disease</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the flight of a bird</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the life of an organism</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">your process of aging.</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war)</obo:IAO_0000116>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">process</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget xml:lang="en">p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/083-003"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000016 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000016">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000017"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<obo:IAO_0000112 xml:lang="en">an atom of element X has the disposition to decay to an atom of element Y</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">certain people have a predisposition to colon cancer</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">children are innately disposed to categorize objects in certain ways.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the cell wall is disposed to filter chemicals in endocytosis and exocytosis</obo:IAO_0000112>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: Dispositions exist along a strength continuum. Weaker forms of disposition are realized in only a fraction of triggering cases. These forms occur in a significant number of cases of a similar type.</obo:IAO_0000116>
<obo:IAO_0000600 xml:lang="en">b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">disposition</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/062-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000017 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000017">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<obo:IAO_0000112 xml:lang="en">the disposition of this piece of metal to conduct electricity.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the disposition of your blood to coagulate</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the function of your reproductive organs</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the role of being a doctor</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the role of this boundary to delineate where Utah and Colorado meet</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances.</obo:IAO_0000115>
<obo:IAO_0000600 xml:lang="en">To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">realizable entity</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000017"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/058-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000018 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000018">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<obo:BFO_0000179>0d-s-region</obo:BFO_0000179>
<obo:BFO_0000180>ZeroDimensionalSpatialRegion</obo:BFO_0000180>
<obo:IAO_0000600 xml:lang="en">A zero-dimensional spatial region is a point in space. (axiom label in BFO2 Reference: [037-001])</obo:IAO_0000600>
<obo:IAO_0000602>(forall (x) (if (ZeroDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [037-001] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">zero-dimensional spatial region</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000018"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A zero-dimensional spatial region is a point in space. (axiom label in BFO2 Reference: [037-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/037-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000018"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (ZeroDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [037-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/037-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000019 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000019">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<obo:IAO_0000112 xml:lang="en">the ambient temperature of this portion of air</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the color of a tomato</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the length of the circumference of your waist</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the mass of this piece of gold.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the shape of your nose</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the shape of your nostril</obo:IAO_0000112>
<obo:IAO_0000600 xml:lang="en">a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">quality</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/055-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000020 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000020">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000031"/>
<obo:IAO_0000112 xml:lang="en">Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the disposition of this fish to decay</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the function of this heart: to pump blood</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the mutual dependence of proton donors and acceptors in chemical reactions [79</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the pink color of a medium rare piece of grilled filet mignon at its center</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the role of being a doctor</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the shape of this hole.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the smell of this portion of mozzarella</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n &gt; 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i &lt; j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004])</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])</obo:IAO_0000115>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">specifically dependent continuant</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget xml:lang="en">b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n &gt; 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i &lt; j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/131-004"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000020"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget xml:lang="en">b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/050-003"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000023 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000023">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000017"/>
<obo:IAO_0000112 xml:lang="en">John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the priest role</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the role of a boundary to demarcate two neighboring administrative territories</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the role of a building in serving as a military target</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the role of a stone in marking a property boundary</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the role of subject in a clinical trial</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the student role</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: One major family of examples of non-rigid universals involves roles, and ontologies developed for corresponding administrative purposes may consist entirely of representatives of entities of this sort. Thus ‘professor’, defined as follows,b instance_of professor at t =Def. there is some c, c instance_of professor role & c inheres_in b at t.denotes a non-rigid universal and so also do ‘nurse’, ‘student’, ‘colonel’, ‘taxpayer’, and so forth. (These terms are all, in the jargon of philosophy, phase sortals.) By using role terms in definitions, we can create a BFO conformant treatment of such entities drawing on the fact that, while an instance of professor may be simultaneously an instance of trade union member, no instance of the type professor role is also (at any time) an instance of the type trade union member role (any more than any instance of the type color is at any time an instance of the type length).If an ontology of employment positions should be defined in terms of roles following the above pattern, this enables the ontology to do justice to the fact that individuals instantiate the corresponding universals – professor, sergeant, nurse – only during certain phases in their lives.</obo:IAO_0000116>
<obo:IAO_0000600 xml:lang="en">b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">role</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/061-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000026 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000026">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<obo:BFO_0000179>1d-s-region</obo:BFO_0000179>
<obo:BFO_0000180>OneDimensionalSpatialRegion</obo:BFO_0000180>
<obo:IAO_0000112 xml:lang="en">an edge of a cube-shaped portion of space.</obo:IAO_0000112>
<obo:IAO_0000600 xml:lang="en">A one-dimensional spatial region is a line or aggregate of lines stretching from one point in space to another. (axiom label in BFO2 Reference: [038-001])</obo:IAO_0000600>
<obo:IAO_0000602>(forall (x) (if (OneDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [038-001] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">one-dimensional spatial region</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000026"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A one-dimensional spatial region is a line or aggregate of lines stretching from one point in space to another. (axiom label in BFO2 Reference: [038-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/038-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000026"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (OneDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [038-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/038-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000027 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000027">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:BFO_0000179>object-aggregate</obo:BFO_0000179>
<obo:BFO_0000180>ObjectAggregate</obo:BFO_0000180>
<obo:IAO_0000112 xml:lang="en">a collection of cells in a blood biobank.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a swarm of bees is an aggregate of members who are linked together through natural bonds</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a symphony orchestra</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an organization is an aggregate whose member parts have roles of specific types (for example in a jazz band, a chess club, a football team)</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">defined by fiat: the aggregate of members of an organization</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">defined through physical attachment: the aggregate of atoms in a lump of granite</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">defined through physical containment: the aggregate of molecules of carbon dioxide in a sealed container</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">defined via attributive delimitations such as: the patients in this hospital</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the aggregate of bearings in a constant velocity axle joint</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the aggregate of blood cells in your body</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the nitrogen atoms in the atmosphere</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the restaurants in Palo Alto</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">your collection of Meissen ceramic plates.</obo:IAO_0000112>
<obo:IAO_0000116>An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects </obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: object aggregates may gain and lose parts while remaining numerically identical (one and the same individual) over time. This holds both for aggregates whose membership is determined naturally (the aggregate of cells in your body) and aggregates determined by fiat (a baseball team, a congressional committee).</obo:IAO_0000116>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">object aggregate</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000027"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000116"/>
<owl:annotatedTarget>An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/0000301"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000028 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000028">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
<obo:BFO_0000179>3d-s-region</obo:BFO_0000179>
<obo:BFO_0000180>ThreeDimensionalSpatialRegion</obo:BFO_0000180>
<obo:IAO_0000112 xml:lang="en">a cube-shaped region of space</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a sphere-shaped region of space,</obo:IAO_0000112>
<obo:IAO_0000600 xml:lang="en">A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001])</obo:IAO_0000600>
<obo:IAO_0000602>(forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">three-dimensional spatial region</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000028"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/040-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000028"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/040-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000029 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000029">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000141"/>
<obo:IAO_0000112 xml:lang="en">a hole in the interior of a portion of cheese</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a rabbit hole</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an air traffic control region defined in the airspace above an airport</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the Grand Canyon</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the Piazza San Marco</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the cockpit of an aircraft</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the hold of a ship</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the interior of a kangaroo pouch</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the interior of your office</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the interior of your refrigerator</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the lumen of your gut</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">your left nostril (a fiat part – the opening – of your left nasal cavity)</obo:IAO_0000112>
<obo:IAO_0000600 xml:lang="en">b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002])</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">site</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000029"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/034-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000030 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000030">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000112 xml:lang="en">atom</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">cell</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">cells and organisms</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">engineered artifacts</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">grain of sand</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">molecule</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">organelle</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">organism</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">planet</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">solid portions of matter</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">star</obo:IAO_0000112>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: BFO rests on the presupposition that at multiple micro-, meso- and macroscopic scales reality exhibits certain stable, spatially separated or separable material units, combined or combinable into aggregates of various sorts (for example organisms into what are called ‘populations’). Such units play a central role in almost all domains of natural science from particle physics to cosmology. Many scientific laws govern the units in question, employing general terms (such as ‘molecule’ or ‘planet’) referring to the types and subtypes of units, and also to the types and subtypes of the processes through which such units develop and interact. The division of reality into such natural units is at the heart of biological science, as also is the fact that these units may form higher-level units (as cells form multicellular organisms) and that they may also form aggregates of units, for example as cells form portions of tissue and organs form families, herds, breeds, species, and so on. At the same time, the division of certain portions of reality into engineered units (manufactured artifacts) is the basis of modern industrial technology, which rests on the distributed mass production of engineered parts through division of labor and on their assembly into larger, compound units such as cars and laptops. The division of portions of reality into units is one starting point for the phenomenon of counting.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: Each object is such that there are entities of which we can assert unproblematically that they lie in its interior, and other entities of which we can assert unproblematically that they lie in its exterior. This may not be so for entities lying at or near the boundary between the interior and exterior. This means that two objects – for example the two cells depicted in Figure 3 – may be such that there are material entities crossing their boundaries which belong determinately to neither cell. Something similar obtains in certain cases of conjoined twins (see below).</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: To say that b is causally unified means: b is a material entity which is such that its material parts are tied together in such a way that, in environments typical for entities of the type in question,if c, a continuant part of b that is in the interior of b at t, is larger than a certain threshold size (which will be determined differently from case to case, depending on factors such as porosity of external cover) and is moved in space to be at t at a location on the exterior of the spatial region that had been occupied by b at t, then either b’s other parts will be moved in coordinated fashion or b will be damaged (be affected, for example, by breakage or tearing) in the interval between t and t.causal changes in one part of b can have consequences for other parts of b without the mediation of any entity that lies on the exterior of b. Material entities with no proper material parts would satisfy these conditions trivially. Candidate examples of types of causal unity for material entities of more complex sorts are as follows (this is not intended to be an exhaustive list):CU1: Causal unity via physical coveringHere the parts in the interior of the unified entity are combined together causally through a common membrane or other physical covering\. The latter points outwards toward and may serve a protective function in relation to what lies on the exterior of the entity [13, 47</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: an object is a maximal causally unified material entity</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: ‘objects’ are sometimes referred to as ‘grains’ [74</obo:IAO_0000116>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">object</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/BFO_0000031 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000031">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000002"/>
<obo:IAO_0000112 xml:lang="en">The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the pdf file on your laptop, the pdf file that is a copy thereof on my laptop</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule.</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">Continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])</obo:IAO_0000115>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">generically dependent continuant</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000031"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget xml:lang="en">b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/074-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000034 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000034">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<obo:IAO_0000112 xml:lang="en">the function of a hammer to drive in nails</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the function of a heart pacemaker to regulate the beating of a heart through electricity</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the function of amylase in saliva to break down starch into sugar</obo:IAO_0000112>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: In the past, we have distinguished two varieties of function, artifactual function and biological function. These are not asserted subtypes of BFO:function however, since the same function – for example: to pump, to transport – can exist both in artifacts and in biological entities. The asserted subtypes of function that would be needed in order to yield a separate monoheirarchy are not artifactual function, biological function, etc., but rather transporting function, pumping function, etc.</obo:IAO_0000116>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">function</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/BFO_0000035 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000035">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000112 xml:lang="en">the boundary between the 2nd and 3rd year of your life.</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])</obo:IAO_0000115>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">process boundary</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000035"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget xml:lang="en">p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/084-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000038 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000038">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000008"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000148"/>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: A temporal interval is a special kind of one-dimensional temporal region, namely one that is self-connected (is without gaps or breaks).</obo:IAO_0000116>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">one-dimensional temporal region</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/BFO_0000040 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000040">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000141"/>
<obo:BFO_0000179>material</obo:BFO_0000179>
<obo:BFO_0000180>MaterialEntity</obo:BFO_0000180>
<obo:IAO_0000112 xml:lang="en">a flame</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a forest fire</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a human being</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a hurricane</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a photon</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a puff of smoke</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a sea wave</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">a tornado</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an aggregate of human beings.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an energy wave</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">an epidemic</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the undetached arm of a human being</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here.</obo:IAO_0000116>
<obo:IAO_0000600 xml:lang="en">A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])</obo:IAO_0000600>
<obo:IAO_0000601 xml:lang="en">Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])</obo:IAO_0000601>
<obo:IAO_0000601 xml:lang="en">every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])</obo:IAO_0000601>
<obo:IAO_0000602>(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] </obo:IAO_0000602>
<obo:IAO_0000602>(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] </obo:IAO_0000602>
<obo:IAO_0000602>(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">material entity</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/019-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/020-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000601"/>
<owl:annotatedTarget xml:lang="en">every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/021-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/019-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/021-002"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/020-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000141 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000141">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<obo:BFO_0000179>immaterial</obo:BFO_0000179>
<obo:BFO_0000180>ImmaterialEntity</obo:BFO_0000180>
<obo:IAO_0000116 xml:lang="en">BFO 2 Reference: Immaterial entities are divided into two subgroups:boundaries and sites, which bound, or are demarcated in relation, to material entities, and which can thus change location, shape and size and as their material hosts move or change shape or size (for example: your nasal passage; the hold of a ship; the boundary of Wales (which moves with the rotation of the Earth) [38, 7, 10</obo:IAO_0000116>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">immaterial entity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/BFO_0000144 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000144">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/BFO_0000182"/>
<obo:IAO_0000112 xml:lang="en">On a somewhat higher level of complexity are what we shall call rate process profiles, which are the targets of selective abstraction focused not on determinate quality magnitudes plotted over time, but rather on certain ratios between these magnitudes and elapsed times. A speed process profile, for example, is represented by a graph plotting against time the ratio of distance covered per unit of time. Since rates may change, and since such changes, too, may have rates of change, we have to deal here with a hierarchy of process profile universals at successive levels</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">One important sub-family of rate process profiles is illustrated by the beat or frequency profiles of cyclical processes, illustrated by the 60 beats per minute beating process of John’s heart, or the 120 beats per minute drumming process involved in one of John’s performances in a rock band, and so on. Each such process includes what we shall call a beat process profile instance as part, a subtype of rate process profile in which the salient ratio is not distance covered but rather number of beat cycles per unit of time. Each beat process profile instance instantiates the determinable universal beat process profile. But it also instantiates multiple more specialized universals at lower levels of generality, selected from rate process profilebeat process profileregular beat process profile3 bpm beat process profile4 bpm beat process profileirregular beat process profileincreasing beat process profileand so on.In the case of a regular beat process profile, a rate can be assigned in the simplest possible fashion by dividing the number of cycles by the length of the temporal region occupied by the beating process profile as a whole. Irregular process profiles of this sort, for example as identified in the clinic, or in the readings on an aircraft instrument panel, are often of diagnostic significance.</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">The simplest type of process profiles are what we shall call ‘quality process profiles’, which are the process profiles which serve as the foci of the sort of selective abstraction that is involved when measurements are made of changes in single qualities, as illustrated, for example, by process profiles of mass, temperature, aortic pressure, and so on.</obo:IAO_0000112>
<obo:IAO_0000115 xml:lang="en">b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002])</obo:IAO_0000115>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">process profile</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000144"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget xml:lang="en">b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/093-002"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000148 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000148">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000008"/>
<obo:IAO_0000112 xml:lang="en">the moment at which a child is born</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the moment at which a finger is detached in an industrial accident</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">the moment of death.</obo:IAO_0000112>
<obo:IAO_0000600 xml:lang="en">A zero-dimensional temporal region is a temporal region that is without extent. (axiom label in BFO2 Reference: [102-001])</obo:IAO_0000600>
<obo:IAO_0000602>(forall (x) (if (ZeroDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [102-001] </obo:IAO_0000602>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">zero-dimensional temporal region</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000148"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A zero-dimensional temporal region is a temporal region that is without extent. (axiom label in BFO2 Reference: [102-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/102-001"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000148"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000602"/>
<owl:annotatedTarget>(forall (x) (if (ZeroDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [102-001] </owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/102-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/BFO_0000182 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000182">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000600 xml:lang="en">A history is a process that is the sum of the totality of processes taking place in the spatiotemporal region occupied by a material entity or site, including processes on the surface of the entity or within the cavities to which it serves as host. (axiom label in BFO2 Reference: [138-001])</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/bfo.owl"/>
<rdfs:label xml:lang="en">history</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000182"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">A history is a process that is the sum of the totality of processes taking place in the spatiotemporal region occupied by a material entity or site, including processes on the surface of the entity or within the cavities to which it serves as host. (axiom label in BFO2 Reference: [138-001])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/138-001"/>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/CARO_0000000 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0000000">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Material entity part of or substance produced by a multicellular organism with granularity above the level of a protein complex.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">Anatomical entities - like other material entities - may have immaterial parts.</obo:IAO_0000116>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/caro.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">anatomical entity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_16991 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_16991">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33696"/>
<obo:IAO_0000115>Nucleic acid composed of nucleotides containing deoxyribose and linked by phosphodiester bonds.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/chebi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">deoxyribonucleic acid</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_23367 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_23367">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/chebi.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">molecular entity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_24432 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_24432">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0006955"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23367"/>
</owl:Restriction>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Role inhering in a molecular entity or part of that entity, realized in biological processes.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/chebi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">biological role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_33696 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_33696">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<obo:IAO_0000115>Macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/chebi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">nucleic acid</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_33697 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_33697">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33696"/>
<obo:IAO_0000115>Nucleic acid composed of nucleotides containing ribose and linked by phosphodiester bonds.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/chebi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">ribonucleic acid</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_33839 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_33839">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<obo:IAO_0000115>Molecular entity of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/chebi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">macromolecule</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_36080 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_36080">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<obo:IAO_0000115>Biological macromolecule consisting of one polypeptide chain synthesized at the ribosome.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/chebi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">protein</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CHEBI_4705 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_4705">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_16991"/>
<obo:IAO_0000115>DNA consisting of two parallel strands joined by hydrogen bonds between complementary purines and pyrimidines.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/chebi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">double-stranded DNA</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/CL_0000000 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/CL_0000000">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000000"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Material entity that is part of or derived from an organism, with maximally connected cell compartments surrounded by a plasma membrane.</obo:IAO_0000115>
<obo:IAO_0000115>This should be an inferred subclass of BFO:object. -John</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<rdfs:label xml:lang="en">cell</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001138 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001138">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001122"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_11118"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty>
<rdf:Description>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
</rdf:Description>
</owl:onProperty>
<owl:someValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001142"/>
</owl:Restriction>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001122"/>
<obo:IAO_0000115>Virus disorder that exists as a result of a process of formation of disorder initiated by a coronavirus or coronavirus population.</obo:IAO_0000115>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">coronavirus disorder</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001139 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001139">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001138"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty>
<rdf:Description>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
</rdf:Description>
</owl:onProperty>
<owl:someValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001143"/>
</owl:Restriction>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001138"/>
<obo:IAO_0000115>Coronavirus disorder that exists as a result of a process of formation of disorder initiated by SARS-CoV-2.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 disorder</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001141 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001141">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001140"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001139"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001139"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001143"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001139"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001139"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001140"/>
<obo:IAO_0000115>Coronavirus disease inhering in a SARS-CoV-2 disorder, and which is realized in some COVID-19 disease course.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001142 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001142">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001120"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_11118"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Viral disease course that is the realization of some coronavirus disease and has as a participant a coronavirus.</obo:IAO_0000115>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">coronavirus disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001143 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001143">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001142"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Coronavirus disease course that is the realization of some COVID-19 disease and has participant SARS-CoV-2</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001173 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001173">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001066"/>
<obo:IAO_0000115>Virus aggregate whose members are all coronaviruses.</obo:IAO_0000115>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">coronavirus aggregate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001174 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001174">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001173"/>
<obo:IAO_0000115>Coronavirus aggregate whose members are all SARS-CoV-2.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 aggregate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001191 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001191">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001190"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_11118"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000423"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001190"/>
<obo:IAO_0000115>Respiratory droplet virus fomite with coronavirus part.</obo:IAO_0000115>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">respiratory droplet coronavirus fomite</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001192 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001192">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001191"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000423"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Respiratory droplet virus fomite with SARS-CoV-2 part.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">respiratory droplet SARS-CoV-2 fomite</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001200 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001200">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001194"/>
<obo:IAO_0000115>Coronavirus process realization of an infectious structure disposition inhering in a coronavirus or coronavirus population, having at least the proper process parts: (1) pathogen transmission, (2) establishment of localization in host, (3) process of establishing a viral infection, and (4) appearance of a virus disorder.</obo:IAO_0000115>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">coronavirus pathogenesis</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001201 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001201">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001200"/>
<obo:IAO_0000115>Coronavirus process realization of an infectious structure disposition inhering in a SARS-CoV-2 or a SARS-CoV-2 population, having at least the proper process parts: (1) pathogen transmission, (2) establishment of localization in host, (3) process of establishing a viral infection, and (4) appearance of a virus disorder.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 pathogenesis</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001202 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001202">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<obo:IAO_0000412>Virus replication in which coronavirus is replicated.</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">coronavirus replication</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001203 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001203">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001202"/>
<obo:IAO_0000412>Coronavirus replication in which SARS-CoV-2 is replicated.</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 replication</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001204 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001204">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0019062"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001203"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/PR_000003622"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus attachment stage involving SARS-CoV-2 that bonds with a host cell</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 attachment stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001205 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001205">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0046718"/>
<obo:IAO_0000115>Virus penetration stage involving SARS-CoV-2 that penetrates a host cell</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 penetration stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001206 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001206">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_19076"/>
<obo:IAO_0000115>Virus release stage during which SARS-CoV-2 is released from a host cell</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 release stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001207 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001207">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0019081"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 genome replication stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001209 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001209">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0019083"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 transcription stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001210 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001210">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0019068"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 synthesis stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001211 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001211">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0019061"/>
<obo:IAO_0000115>Virus uncoating stage during which SARS-CoV-2 uncoats outer proteins to release genetic material into host cell.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 uncoating stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001268 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001268">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001266"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001269"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Virus adhesion susceptible cell bearing a SARS-COV-2 adhesion disposition</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-COV-2 adhesion susceptible cell</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001269 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001269">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001267"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Viral adhesion disposition borne by a macromolecule part of SARS-CoV-2 that is the disposition to participate in a SARS-COV-2 attachment process</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-COV-2 adhesion disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001271 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001271">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000486"/>
<obo:IAO_0000115>Infection prevalence involving agents infected by SARS-COV-2.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-COV-2 prevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001272 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001272">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000485"/>
<obo:IAO_0000115>Infectious disease prevalence where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 prevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001273 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001273">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000489"/>
<obo:IAO_0000115>Infectious disease mortality rate where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 mortality rate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001274 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001274">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000487"/>
<obo:IAO_0000115>Infectious disease lifetime prevalence where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 lifetime prevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001275 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001275">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000483"/>
<obo:IAO_0000115>Infectious disease incidence rate where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 incidence rate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001276 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001276">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000481"/>
<obo:IAO_0000115>Infectious disease incidence where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 disease incidence proportion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001277 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001277">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000479"/>
<obo:IAO_0000115>Infectious disease incidence where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 incidence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001278 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001278">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000490"/>
<obo:IAO_0000115>Infectious disease endemicity where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 endemicity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001279 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001279">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000463"/>
<obo:IAO_0000115>Infectious pathogen transmissibility involving SARS-CoV-2.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 transmissibility</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001280 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001280">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000488"/>
<obo:IAO_0000115>Pathogen seroprevalence where the pathogen is SARS-CoV-2.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 seroprevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001281 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001281">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000484"/>
<obo:IAO_0000412>Infection incidence rate involving agents infected by SARS-CoV-2.</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 incidence rate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001282 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001282">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000482"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:comment>Infection incidence proportion involving organisms infected by SARS-CoV-2.</rdfs:comment>
<rdfs:label xml:lang="en">SARS-CoV-2 incidence proportion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001283 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001283">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000480"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:comment>Infection incidence that is the number of organisms in the population that become infected by SARS-CoV-2 during a specified period of time.</rdfs:comment>
<rdfs:label xml:lang="en">SARS-CoV-2 incidence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001284 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001284">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000464"/>
<obo:IAO_0000115>Infectivity where the pathogen is SARS-CoV-2.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 infectivity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001285 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001285">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000466"/>
<obo:IAO_0000115>Virulence where the pathogen is SARS-CoV-2.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 virulence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/COVIDO_0001286 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/COVIDO_0001286">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000494"/>
<obo:IAO_0000115>Infectious disease sporadicity where the infectious disease is COVID-19.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 sporadicity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ERO_0000006 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000006">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000047"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000086"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Processed material bearing a reagent role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ero.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">reagent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ERO_0000008 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000008">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000006"/>
<obo:IAO_0000115>Reagent that is comprised of immunoglobulins produced by B cells in response to an antigen.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ero.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">antibody reagent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ERO_0000337 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000337">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000070"/>
<obo:IAO_0000115>Assay used to determine viral titers.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ero.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">viral plaque assay</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ERO_0000347 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000347">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000011"/>
<obo:IAO_0000115>Planned process used to influence one or more factors in a research study, and the independent variable in an interventional study wherein the influence is measured or evaluated.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ero.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">intervention</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ERO_0000671 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000671">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000070"/>
<obo:IAO_0000115>Assay analyzing blood serum and other bodily fluids, to detect the presence of serum antibodies.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ero.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">serology assay</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ERO_0001362 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0001362">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000070"/>
<obo:IAO_0000115>Assay measuring the concentration of a substance in a material by exploiting binding between an analyte and a corresponding detection antibody.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ero.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunoassay</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/FBdv_00005259 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/FBdv_00005259">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115>Temporal subdivision of a developmental process.</obo:IAO_0000115>
<obo:IAO_0000117>John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">generative stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GEO_000000370 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GEO_000000370">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000115>Material entity that is (1) a bona fide or fiat object part of the crust, any bodies of liquid on or contained within the crust, or planetary boundary layer (if present) of a terrestrial planet (including Earth), dwarf planet, exoplanet, natural satellite, planetesimal, or small Solar System body, and that (2) overlaps the planetary surface (including having a boundary that coincides with part of the planetary surface).</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/GEO</obo:IAO_0000412>
<rdfs:label xml:lang="en">geographical entity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GEO_000000371 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GEO_000000371">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GEO_000000370"/>
<obo:IAO_0000115>Geographical entity that has at least one bona fide boundary.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/GEO</obo:IAO_0000412>
<rdfs:label xml:lang="en">geographical feature</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GEO_000000372 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GEO_000000372">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GEO_000000370"/>
<obo:IAO_0000115>Geographical entity that is demarcated at least in part by one or more closed fiat boundaries all of whose lines are part of the planetary surface.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/GEO</obo:IAO_0000412>
<rdfs:label xml:lang="en">geographical region</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0002250 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0002250">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0006955"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Immune response mediated by cells expressing specific receptors for antigen produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory).</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">adaptive immune response</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0002443 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0002443">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0006955"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process involved in the carrying out of an immune response by a leukocyte.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">leukocyte mediated immunity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0006955 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0006955">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0008150"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">immune response</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0006959 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0006959">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0006955"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Immune response mediated through a body fluid.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">humoral immune response</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0008150 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0008150">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process specifically pertinent to the functioning of functionally integrated units.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">biological process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019028 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019028">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0000508"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Protein surrounding virion nucleic acid in some virus particles.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">viral capsid</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019031 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019031">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<obo:IAO_0000115>Macromolecule lipid bilayer of a virion surrounding capsid.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">viral envelope</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019061 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019061">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001114"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0046718"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus generative stage during which an incoming virus is disassembled in the host cell to release a replication-competent viral genome.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus uncoating stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019062 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019062">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001114"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus generative stage during which a virion protein binds to molecules on the host surface or host cell surface projection.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus attachment stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019068 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019068">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001114"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0019081"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus developmental stage during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus synthesis stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019081 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019081">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001114"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0019061"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus generative stage during which viral mRNA is translated into viral protein, using the host cellular machinery.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus translation stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019083 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019083">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001114"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0019081"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus developmental stage during which a viral genome, or part of a viral genome, is transcribed within the host cell.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus transcription stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019814 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019814">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0032991"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Protein complex that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains, held together by disulfide bonds and sometimes complexed with additional proteins. An immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">immunoglobulin complex</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0019815 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0019815">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0032991"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Immunoglobulin complex present in the plasma membrane of B cells and that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">B cell receptor complex</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0032502 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0032502">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0008150"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Biological process whose specific outcome is the progression of a functional, integrated, unit.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">developmental process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0032991 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0032991">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">macromolecular complex</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0042101 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0042101">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0032991"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">T cell receptor complex</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0044403 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0044403">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0008150"/>
<obo:IAO_0000115 xml:lang="en">Process carried out by gene products in an organism or acellular structure that enables the entity to engage in a symbiotic relationship with an organism.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">John Beverley</obo:IAO_0000117>
<obo:IAO_0000412 xml:lang="en">http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">symbiotic process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0044406 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0044406">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0008150"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Attachment of a symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">adhesion of symbiont to host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0044409 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0044409">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0008150"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Penetration by an organism into the body, tissues, or cells of the host organism.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">entry into host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0044411 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0044411">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0044409"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Penetration by an organism into its host organism via active breaching of the physical barriers of the host organism.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">entry into host through host barriers</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0045087 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0045087">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0006955"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">innate immune response</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0046718 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0046718">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001114"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0019062"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus generative stage during which a virion or viral nucleic acid breaches the barriers of a host.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus penetration stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0046727 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0046727">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0019028"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Protein subunit comprising viral capsid.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">capsomere</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0048519 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0048519">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0065007"/>
<obo:IAO_0000115>Process that stops, prevents, or reduces the frequency, rate or extent of a biological process.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label xml:lang="en">negative regulation of biological process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0048525 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0048525">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0065007"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">negative regulation of viral process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0050777 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0050777">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0065007"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process that stops, prevents, or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">negative regulation of immune response</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0051093 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0051093">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0065007"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">negative regulation of developmental process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0051234 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0051234">
<owl:equivalentClass>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0008150"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process that localizes a substance or cellular component via movement, tethering or selective degradation.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label>establishment of localization</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_0065007 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0065007">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process that modulates a measurable attribute of any biological process, quality or function.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/go.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">biological regulation</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GO_19076 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_19076">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001114"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0019068"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus generative stage involving dissemination of mature virus particles from the host cell, by cell lysis or the budding of virus particles from the cell membrane.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus release stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000005 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000005">
<rdfs:subClassOf rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/DirectiveInformationContentEntity"/>
<obo:IAO_0000115>Directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved.</obo:IAO_0000115>
<rdfs:comment>http://purl.obolibrary.org/obo/iao.owl</rdfs:comment>
<rdfs:label xml:lang="en">objective specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000007 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000007">
<rdfs:subClassOf rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/DirectiveInformationContentEntity"/>
<obo:IAO_0000115>Directive information entity that describes an action the bearer will take</obo:IAO_0000115>
<rdfs:comment>http://purl.obolibrary.org/obo/iao.owl</rdfs:comment>
<rdfs:label xml:lang="en">action specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000030 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000030">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000031"/>
<rdfs:label xml:lang="en">information content entity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000064 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000064">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000104"/>
<obo:IAO_0000115>Plan specification which describes the inputs and output of mathematical functions as well as workflow of execution for achieving an predefined objective. Algorithms are realized usually by means of implementation as computer programs for execution by automata.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/iao.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">algorithm</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000104 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000104">
<rdfs:subClassOf rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/DirectiveInformationContentEntity"/>
<obo:IAO_0000115>Directive information entity that when concretized it is realized in a process in which the bearer tries to achieve the objectives, in part by taking the actions specified. Plan specifications includes parts such as objective specification, action specifications and conditional specifications.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/iao.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">plan specification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO-COVID-19_0001362 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO-COVID-19_0001362">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000412>Virus which infects and replicates within or on fungi.</obo:IAO_0000412>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">mycovirus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO-COVID-19_0001388 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO-COVID-19_0001388">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001386"/>
<obo:IAO_0000115>Process in which multiple COVID-19 epidemics caused by SARS-CoV-2 unfold over overlapping periods of time and affect organism populations located in different geographic regions, including different countries and continents.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 pandemic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO-COVID-19_0001391 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO-COVID-19_0001391">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001387"/>
<obo:IAO_0000115>Process of COVID-19 realizations and for which there is a statistically significant increase in the infectious disease incidence of a population.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">COVID-19 epidemic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000400 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000400">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000424"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000430"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000431"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000434"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000435"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
<obo:IAO_0000115 xml:lang="en">A role borne by an organism in symbiosis.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">symbiont role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000401 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000401">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000400"/>
<obo:IAO_0000115 xml:lang="en">Symbiont role borne by an organism in which both symbionts derive a growth, survival, or fitness advantage from symbiosis.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">mutualist role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000402 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000402">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000400"/>
<obo:IAO_0000115 xml:lang="en">Symbiont role borne by an organism that derives a growth, survival, or fitness advantage from symbiosis, while the other symbiont is neither advantaged nor disadvantaged.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">commensal role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000403 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000403">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000400"/>
<obo:IAO_0000115 xml:lang="en">Symbiont role borne by an organism that derives a growth, survival, or fitness advantage from symbiosis while the other symbiont's growth, survival, or fitness is reduced.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">parasite role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000406 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000406">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000625"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000626"/>
<owl:Class>
<owl:complementOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000066"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000457"/>
</owl:Restriction>
</owl:complementOf>
</owl:Class>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Infectious disposition to become part of a disorder only in organisms whose defenses are compromised.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">opportunistic infectious disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000407 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000407">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000625"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000626"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000066"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000457"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Infectious disposition to become part of a disorder in immunocompetent organisms.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>A pathogen with a primary infectious disposition can cause disease or death in both immunocompromised and immunocompetent hosts.</rdfs:comment>
<rdfs:label xml:lang="en">primary infectious disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000408 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000408">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000522"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000415"/>
<obo:IAO_0000115 xml:lang="en">Host role borne by an organism whose extended organism provides an environment supportive for the survival, growth, maturation, or reproduction of an object contained as a proper part.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">symbiont host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000409 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000409">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000408"/>
<obo:IAO_0000115 xml:lang="en">Symbiont host role borne by an organism iwhose partner in symbiosis reaches developmental maturity or reproduces sexually in the host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">definitive host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000410 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000410">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000408"/>
<obo:IAO_0000115 xml:lang="en">Symbiont host role borne by an organism whose partner in symbiosis utilizes the host to undergo a developmental stage transition, and the host is required for continuation of the partner's life cycle.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">intermediate host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000412 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000412">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000408"/>
<obo:IAO_0000115 xml:lang="en">Symbiont host role borne by an organism whose partner in symbiosis has the infectious disposition but cannot be transmitted from the host to the partner's definitive host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">dead-end host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000414 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000414">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000415"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Pathogen host role borne by an organism whose extended organism contains an infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious agent host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000415 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000415">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Host role borne by an object having a pathogen as part or an borne by an organism having a pathogen as part of its extended organism.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000419 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000419">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001130"/>
<obo:IAO_0000115 xml:lang="en">A pathogen vector role borne by an organism in virtue of the fact that the pathogen does not multiply in or on the vector.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<oboInOwl:hasExactSynonym>passive carrier</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">mechanical vector role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000420 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000420">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001130"/>
<obo:IAO_0000115 xml:lang="en">A pathogen vector role borne by an organism in virtue of the fact that the pathogen multiplies in the vector.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">biological vector role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000421 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000421">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001096"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Class>
<owl:complementOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001015"/>
<owl:someValuesFrom>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001054"/>
</owl:unionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000002"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001096"/>
<obo:IAO_0000115 xml:lang="en">A pathogen transporter role borne by an entity in virtue of the fact that the entity is not a complete organism.</obo:IAO_0000115>
<obo:IAO_0000116>I don't understand the rdfs comment indicating drinking water bears the infected agent vehicle role, but neither of the subtypes. Presumably, if an infectious agent is present in drinking water, then it bears a fomite role. Drinking water is, in fact, a classic example. -John Beverley</obo:IAO_0000116>
<obo:IAO_0000116>I've expanded this definition and label to cover infectious agent pathogens and infectious structure pathogens. -John Beverley</obo:IAO_0000116>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:comment>Drinking water bears the infectious agent vehicle role, but does not bear either of the subtype roles.</rdfs:comment>
<rdfs:label xml:lang="en">pathogen vehicle role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000422 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000422">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000421"/>
<obo:IAO_0000115 xml:lang="en">A pathogen vehicle role borne by an entity in virtue of the fact that the entity is living or contains living cells other than those that have the infectious disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:comment>Examples include blood, serum, tissue, or fresh produce.</rdfs:comment>
<rdfs:label xml:lang="en">biological vehicle role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000423 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000423">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000421"/>
<rdfs:subClassOf>
<owl:Class>
<owl:complementOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">An infectious agent vehicle role borne by an entity in virtue of the fact that the entity is not alive.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">fomite role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000424 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000424">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001015"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000430"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000431"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000434"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000435"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
<obo:IAO_0000115 xml:lang="en">Role borne by a material entity in which pathogens can persist, and from which they can be transmitted to hosts.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">reservoir of pathogen role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000425 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000425">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23367"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000437"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000438"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000444"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000450"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000451"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition borne by a biological macromolecule produced by a pathogen that is a disposition to undergo processes that increase the pathogen's virulence.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>The virulence factor disposition is typically realized in processes that improve survival of the pathogen in a host, increase the likelihood of transmission to a host, or cause pathological processes in a host.</rdfs:comment>
<rdfs:label xml:lang="en">virulence factor disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000426 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000426">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23367"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000437"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000438"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000444"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000450"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000451"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition to cause I) malfunction of cells, ii) damage to extracellular matrix, or iii) damage of cells to a degree that can result in cell death.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">toxin disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000427 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000427">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
<obo:IAO_0000115 xml:lang="en">Toxin disposition to damage cells or extracellular matrix by a direct enzymatic process.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">exotoxin disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000430 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000430">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CARO_0000000"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000431"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000434"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000435"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
<obo:IAO_0000115 xml:lang="en">Role borne by an anatomical entity that serves as the site through which a pathogen enters a host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen portal of entry role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000431 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000431">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CARO_0000000"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000434"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000435"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
<obo:IAO_0000115 xml:lang="en">Role borne by an anatomical entity that serves as the site through which a pathogen exits a host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen portal of exit role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000434 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000434">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000504"/>
</owl:Restriction>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000435"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
<obo:IAO_0000115 xml:lang="en">Role borne by an infectious disorder whose host has another, distinct, infectious disorder - neither arising from the other through metastasis - which emerged after this infectious disorder was established due to increased host susceptibility to infectious disorders.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">primary infection role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000435 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000435">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000504"/>
</owl:Restriction>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000629"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
<obo:IAO_0000115 xml:lang="en">Role borne by an infectious disorder whose host has another, distinct, primary infectious disorder - neither arising from the other through metastasis - which emerged after the primary infectious disorder was established due to increased host susceptibility to infectious disorders.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">secondary infection role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000436 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000436">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000504"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000504"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000495"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000504"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000504"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disease whose physical basis is an infectious disorder.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">tranmissible disease</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious disease</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000437 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000437">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23367"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0044406"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000438"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000444"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000450"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000451"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition borne by a macromolecule that is the disposition to participate in adherence to a host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">adhesion disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000438 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000438">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23367"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002213"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0044411"/>
</owl:Restriction>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000444"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000450"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000451"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition borne by a biological macromolecule that is the disposition to facilitate breach of and entry through host barriers.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118>Invasion factor; invasin</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">invasion disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000444 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000444">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000450"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000451"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition inhering in an acellular structure or organism, with a part having a disposition to mitigate damage to the entity from invasive or internal threats, which is realized in one or more negative biological regulation process.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Examples include the following: CCR5 mutations protect T cells from HIV invasion. A tumor cell's resistance to chemotherapy protects the cell from damage by the drug (although this harms the patient). An insect's resistance to insecticide protects it from the insecticide.</rdfs:comment>
<rdfs:label xml:lang="en">protective resistance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000445 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000445">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000444"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000446"/>
<obo:IAO_0000115 xml:lang="en">Protective resistance that mitigates the damaging effects of a drug.</obo:IAO_0000115>
<obo:IAO_0000116>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000116>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">resistance to drug</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000446 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000446">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000444"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Protective resistance that inheres in an organism and mitigates the damaging effects of a pathogen.</obo:IAO_0000115>
<obo:IAO_0000116>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000116>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">resistance to pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000447 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000447">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000588"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000055"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000448"/>
</owl:Restriction>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000588"/>
<obo:IAO_0000115 xml:lang="en">Collective resistance disposition that inheres in an organism population where the proportion of the population with immunity to an infectious agent is high resulting in a low number of transmissions from hosts to susceptible individuals.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">herd immunity to infectious organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000448 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000448">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000446"/>
<obo:IAO_0000115 xml:lang="en">Resistance to pathogen that inheres in an organism due to immune system components in its extended organism.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunity to pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000449 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000449">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000448"/>
<obo:IAO_0000115 xml:lang="en">Immunity to pathogen that results in elimination of the infectious agent from the host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Sterilizing immunity is typically conferred by neutralizing antibodies.</rdfs:comment>
<rdfs:label xml:lang="en">sterilizing immunity to infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000450 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000450">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0051234"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000626"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000451"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition borne by a material entity to establish localization in and result in formation of disorder in a host or immunocompetent members of the same species as the host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">pathogenicity</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogenic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000451 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000451">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0044411"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition borne by a pathogen that is the disposition to penetrate the epithelial barriers of an organism of another species.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">invasive disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000453 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000453">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
<obo:IAO_0000115 xml:lang="en">Infectious disposition to be transmitted from an infected, non-human host to a human host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">zoonotic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000454 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000454">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
<obo:IAO_0000115 xml:lang="en">Infectious disposition to be transmitted from an infected, human host to a non-human host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>An infectious disease associated with an infectious agent that bears the reverse zoonotic disposition is referred to as a reverse zoonosis.</rdfs:comment>
<rdfs:label xml:lang="en">reverse zoonotic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000455 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000455">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000027"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000458"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition that inheres in a collection of entities in virtue of the individual dispositions of the constituents of that collection.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:comment>This should be pushed up to: http://purl.obolibrary.org/obo/bfo.owl</rdfs:comment>
<rdfs:label xml:lang="en">collective disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000456 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000456">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000457"/>
<obo:IAO_0000115 xml:lang="en">Organism that is experiencing immunosuppression.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunosuppressed organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000457 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000457">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000589"/>
<obo:IAO_0000115 xml:lang="en">Organism that has immunocompetence.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunocompetent organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000458 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000458">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000538"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000656"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000618"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition that inheres in a pathogen host and is a disposition to horizontally transmit that pathogen to organisms of the same species as the host, through casual contact, with a high likelihood of realization.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">contagiousness</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000459 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000459">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000531"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000615"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Host that contains a colony in or on its extended organism.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">colonized host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000463 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000463">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an infectious agent or infectious structure and is the likelihood that the agent or structure will undergo a horizontal transmission process.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>The transmissibility quality varies with both the type of organism being transmitted and the type of organism to which transmission is happening.</rdfs:comment>
<rdfs:label xml:lang="en">infectious pathogen transmissibility</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000464 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000464">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in a pathogen and is the liklihood that the infectious disposition will be realized upon exposure of a susceptible organism.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>This quality is measured by the proportion of exposed who become infected.</rdfs:comment>
<rdfs:label xml:lang="en">infectivity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000466 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000466">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in a pathogen and is the degree to which realizations of the infectious disease caused by the pathogen become severe or fatal.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>This quality is measured by the proportion of clinically apparent cases that are severe or fatal.</rdfs:comment>
<rdfs:label xml:lang="en">virulence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000467 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000467">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an entity and is the degree to which it can be harmed by another entity.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Low susceptibility is often referred to as resistance. In this sense, resistance is a quality.</rdfs:comment>
<rdfs:label xml:lang="en">susceptibility</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000468 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000468">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000467"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
</owl:Restriction>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000469"/>
<obo:IAO_0000115 xml:lang="en">Susceptibility that inheres in an organism and is the degree to which it can be harmed by an infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">susceptibility to infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000469 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000469">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000467"/>
<obo:IAO_0000115 xml:lang="en">Susceptibility that is the degree to which an entity can be harmed or inhibited from surviving by a drug.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">drug susceptibility</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000470 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000470">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000469"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Drug susceptibility that inheres in an infectious agent and is the degree to which the infectious agent can be harmed or inhibited from surviving by a drug.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">drug susceptibility of infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000471 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000471">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<obo:IAO_0000115>Infection comprised of infectious organisms from different species.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">complex infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000472 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000472">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000586"/>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Class>
<owl:complementOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CL_0000000"/>
</owl:Restriction>
</owl:complementOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000473"/>
<obo:IAO_0000115 xml:lang="en">Infection in which pathogen parts persist in the extracellular space of the host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">extracellular infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000473 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000473">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000586"/>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001054"/>
</owl:unionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CL_0000000"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000506"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/VIDO_0000505"/>
<obo:IAO_0000115 xml:lang="en">Infection in which pathogen parts persist inside host cells.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">intracellular infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000474 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000474">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<obo:IAO_0000115>Infection for which the infectious agents or structures that are part of the infection are distributed throughout the host.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">systematic infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000475 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000475">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<obo:IAO_0000115>Infection for which the infectious agents or structures that are part of the infection are limited to a relatively small area of the host's body.</obo:IAO_0000115>
<rdfs:label xml:lang="en">local infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000477 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000477">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000495"/>
<obo:IAO_0000115 xml:lang="en">Infectious disease course that begins soon after infection is established and progresses rapidly to severe stages.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">acute infectious disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000479 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000479">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the number of realizations of an infectious disease for which the infectious disease course begins during a specified period of time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>A particular instance of infectious disease incidence will depend on a type of infectious disease, a population, and a period of time. Incidence is used as a measure of risk. Actual measures of incidence are based only on reported cases and usually specify a time interval and geographic location. Other constraints may include population demographics. These constraints will vary with the context of the incidence measure.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease incidence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000480 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000480">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the number of organisms in the population that become infected with a pathogen during a specified period of time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>A particular instance of infection incidence will depend on a type of infectious agent, a population, and a period of time. Incidence is used as a measure of risk. Actual measures of incidence are based only on reported cases and usually specify a time interval and geographic location. Other constraints may include population demographics. These constraints will vary with the context of the incidence measure.</rdfs:comment>
<rdfs:label xml:lang="en">infection incidence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000481 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000481">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the proportion of members of the population not experiencing an infectious disease course at the beginning of a specified period of time and in whom the infectious disease begins during the specified period of time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">cumulative incidence of infectious disease</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>An instance of infectious disease incidence proportion is measured by dividing a measure of an instance of infectious disease incidence by the number of members of the population in which the infectious disease course had not begun at the beginning of the specified period of time over which the incidence was measured.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease incidence proportion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000482 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000482">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the proportion of members of the population not infected at the beginning of a specified period of time who become infected during the specified period of time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">cumulative incidence of infection</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>An instance of infection incidence proportion is measured by dividing a measure of an instance of infection incidence by the number of members of the population not infected at the beginning of the specified period of time over which the incidence was measured.</rdfs:comment>
<rdfs:label xml:lang="en">infection incidence proportion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000483 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000483">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the infectious disease incidence proportion per unit time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>An instance of infectious disease incidence rate is measured by dividing a measure of an instance of the infectious disease incidence proportion by the length of the period of time over which the incidence was measured.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease incidence rate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000484 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000484">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the infection incidence proportion per unit time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>An instance of infection incidence rate is measured by dividing a measure of an instance of infection incidence proportion by the length of the period of time over which the incidence was measured.</rdfs:comment>
<rdfs:label xml:lang="en">infection incidence rate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000485 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000485">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the number of realizations of an infectious disease in the population at a specified time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Prevalence is sometimes defined as a proportion with total population size in the denominator. A particular instance of infectious disease prevalence will depend on a type of infectious disease, a population, and a period of time. Actual measures of prevalence are based only on reported cases and usually specify a time interval and geographic location. Other constraints may include population demographics.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease prevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000486 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000486">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the number of organisms in the population infected with a pathogen at a specified time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Prevalence is sometimes defined as a proportion with total population size in the denominator. A particular instance of infection prevalence will depend on a type of infectious agent, a population, and a period of time. Actual measures of prevalence are based only on reported cases and usually specify a time interval and geographic location. Other constraints may include population demographics.</rdfs:comment>
<rdfs:label xml:lang="en">infection prevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000487 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000487">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the number of organisms in the population who have, at any point during their lives, been bearers of an infectious disease and experienced realization of the disease.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Prevalence is sometimes defined as a proportion with total population size in the denominator. A particular instance of infectious disease lifetime prevalence will depend on a type of infectious disease and a population. Actual measures of prevalence are based only on reported cases and usually specify a geographic location. Other constraints may include population demographics.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease lifetime prevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000488 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000488">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the number of organisms in the population that have antibody specific for a pathogen in their serum at a specified time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Prevalence is sometimes defined as a proportion with total population size in the denominator. A particular instance of infectious agent seroprevalence will depend on a type of infectious agent and a population. Actual measures of seroprevalence are based only on tested individuals and usually specify a geographic location. Other constraints may include population demographics.</rdfs:comment>
<rdfs:label xml:lang="en">pathogen seroprevalence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000489 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000489">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population and is the per capita number of deaths in the population resulting from an infectious disease over a specified period of time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>A particular instance of infectious disease mortality rate will depend on a type of infectious disease and a population. Actual measures of mortality rate are based only on reported cases and usually specify a geographic location. Other constraints may include population demographics. Mortality rate is typically expressed in units of deaths per 1000 individuals per year.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease mortality rate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000490 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000490">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population in virtue of the fact that infections of the type that causes an infectious disease are maintained in the population via intra-population transmission or by transmission from a local reservoir.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>A particular instance of infectious disease endemicity will depend on a type of infectious agent and a population. The population may be specified by temporal, geographic, or demographic constraints. Infectious diseases that are typical or common to a particular population are referred to as endemic.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease endemicity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000494 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000494">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Quality that inheres in an organism population by virtue of the fact that realizations of an infectious disease occur in the population with a fluctuating prevalence.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Sporadic quality of infectious disease is relational to previous prevalence of the disease.</rdfs:comment>
<rdfs:label xml:lang="en">infectious disease sporadicity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000495 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000495">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000063"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000055"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000436"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000063"/>
<obo:IAO_0000115 xml:lang="en">Disease course that is the realization of an infectious disease.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">infectious disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000496 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000496">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000590"/>
<obo:IAO_0000115 xml:lang="en">Chronic infectious disease course that does not progress to severe stages for a long period of time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">long-term non-progressing infectious disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000497 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000497">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002234"/>
<owl:someValuesFrom>
<owl:Restriction>
<owl:onProperty>
<rdf:Description>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
</rdf:Description>
</owl:onProperty>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000448"/>
</owl:Restriction>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 xml:lang="en">Process by which an organism acquires immunity to an infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunization against infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000498 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000498">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000497"/>
<obo:IAO_0000115 xml:lang="en">Immunization that begins with exposure of an organism to antigen and results in immunity against an infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">inoculation</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">active immunization against infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000499 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000499">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000498"/>
<obo:IAO_0000115 xml:lang="en">Active immunization that begins with exposure of an organism to a vaccine.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">vaccination against infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000500 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000500">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000498"/>
<obo:IAO_0000115 xml:lang="en">Active immunization that begins with exposure to smallpox in the form of a scab from a pustule and results in immunity against smallpox.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">variolation</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000501 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000501">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000497"/>
<obo:IAO_0000115 xml:lang="en">Immunization that begins with transfer to an organism of molecules not produced by that organism and that confer immunity against an infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">passive immunization against infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000502 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000502">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 xml:lang="en">Process of infectious disease realizations and for which there is a statistically significant increase in the infectious disease incidence of a population.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious disease epidemic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000503 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000503">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 xml:lang="en">Process in which multiple infectious disease epidemics of the same type of infectious disease unfold over overlapping periods of time and affect organism populations located in different geographic regions, including different countries and continents.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious disease pandemic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000504 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000504">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000045"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000087"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001054"/>
</owl:unionOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Disorder that is part of an organism whose extended organism has some infectious agent or structure as part, which participates in the formation of infection.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious disorder</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000506 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000506">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000472"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_2"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000178"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000472"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/VIDO_0000505"/>
<obo:IAO_0000115 xml:lang="en">Infection that has as part bacteria located in the blood.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">bacteremia</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000509 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000509">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000027"/>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Aggregate of organisms of the same species.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:comment>The organism population may be delineated by spatio-temporal proximity or by demographic criteria such as age.</rdfs:comment>
<rdfs:label xml:lang="en">organism population</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000511 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000511">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Organism population whose members have an infection.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">infected population</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000512 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000512">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000495"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000495"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Organism population in whose members an infectious disease is being realized.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">diseased population</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000513 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000513">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Organism population whose members each have an infectious disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">infectious agent population</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000514 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000514">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Organism population whose members are not infected with an infectious agent and who lack immunity to the infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">at-risk population</obo:IAO_0000118>
<rdfs:label xml:lang="en">susceptible population</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000515 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000515">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Organism population whose members are participating in non-parasitic symbiosis with a particular host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">normal resident microflora population</obo:IAO_0000118>
<rdfs:comment>An infectious organism population (IDO:0000513) (1) that is not part of any infection (IDO:0000586), (2) whose members are participating in a process of symbiosis (GO:0044403) with the same host, and (3) whose members are organisms of types among the normal resident microbiota for the type of host organism.</rdfs:comment>
<rdfs:label xml:lang="en">normal resident microbiota population</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000519 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000519">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000038"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001348"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">One-dimensional temporal region beginning with the extablishment of an infectious agent or structure in a host and ending with the onset of symptoms in the host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">incubation interval</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000520 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000520">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000038"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001353"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001343"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">One-dimensional temporal region during which a pathogen host bears a contagiousness disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">communicability interval</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000522 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000522">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000400"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Organism bearing a symbiont role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">symbiont</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000523 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000523">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000522"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000400"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Organism that can only reach developmental maturity, replicate, or persist in symbiosis.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">obligatory symbiont</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000524 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000524">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000522"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000401"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Symbiont bearing a mutualist role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">mutualist</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000525 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000525">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000522"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000402"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Symbiont bearing a commensal role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">commensal</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000526 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000526">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000522"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000403"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Symbiont bearing a parasite role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">parasite</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000528 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000528">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000450"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000544"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<obo:IAO_0000115 xml:lang="en">Material entity bearing a pathogenic disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000530 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000530">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000528"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000407"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Pathogen bearing a primary infectious disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118>principal pathogen</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">primary pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000531 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000531">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000030"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000629"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Object bearing a host role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl
This should be pushed to an upper-level ontology.</obo:IAO_0000412>
<rdfs:label xml:lang="en">host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000532 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000532">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000531"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000409"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Host bearing a definitive host role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">primary host</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">definitive host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000533 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000533">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000531"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000410"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Host bearing an intermediate host role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">secondary host</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">intermediate host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000535 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000535">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000531"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000412"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Host bearing a dead-end host role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">incidental host</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">dead-end host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000537 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000537">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000538"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000414"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Pathogen host bearing an infectious agent host role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious agent host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000538 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000538">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000531"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000415"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Host bearing a pathogen host role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000539 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000539">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000537"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001124"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Infectious agent host bearing the infectious agent carrier role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">asymptomatic infectious agent carrier</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000543 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000543">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001095"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000421"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<obo:IAO_0000115 xml:lang="en">Pathogen transporter bearing a pathogen vehicle role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen vehicle</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000544 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000544">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000543"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000423"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000045"/>
<obo:IAO_0000115 xml:lang="en">Pathogen vehicle bearing a fomite role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">fomite</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000545 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000545">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000424"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<obo:IAO_0000115 xml:lang="en">Material entity bearing a pathogen reservoir role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious agent reservoir</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000547 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000547">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000425"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">A macromolecule produced by a pathogen and that has a virulence factor disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virulence factor</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000548 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000548">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000438"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Biological macromolecule that has an invasion disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">invasin</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">invasion factor</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000549 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000549">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Molecular entity that has a toxin disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">toxin</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000550 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000550">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000549"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000427"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Toxin bearing an exotoxin disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">exotoxin</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000551 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000551">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000550"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001166"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000550"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000427"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Exotoxin bearing an enterotoxin disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">enterotoxin</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000552 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000552">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000549"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001165"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000549"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Toxin bearing an endotoxin disposition that is a structural component of a pathogen and is released from the pathogen only upon cytolysis.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">endotoxin</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000553 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000553">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CARO_0000000"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001036"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000430"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Anatomical entity bearing a pathogen portal of entry role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<rdfs:label xml:lang="en">pathogen portal of entry</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000554 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000554">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CARO_0000000"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001037"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000431"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000000"/>
<obo:IAO_0000115 xml:lang="en">Anatomical entity bearing a pathogen portal of exit role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<rdfs:label xml:lang="en">pathogen portal of exit</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000557 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000557">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000437"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Biological macromolecule that has an adhesion disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">adhesin</obo:IAO_0000118>
<obo:IAO_0000118 xml:lang="en">adhesion molecule</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">adhesion factor</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000566 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000566">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000434"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000567"/>
<obo:IAO_0000115 xml:lang="en">Infectious disorder bearing a primary infection role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">primary infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000567 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000567">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000435"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Infectious disorder bearing a secondary infection role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">secondary infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000568 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000568">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000436"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000453"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
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<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
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<obo:IAO_0000115 xml:lang="en">Infectious disease inhering in an infectious disorder composed of pathogens having zoonotic dispositions.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">zoonosis</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000570 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000570">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000586"/>
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<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001126"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Infection that is part of an asymptomatic carrier.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">subclinical infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000571 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000571">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000444"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
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<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<obo:IAO_0000115 xml:lang="en">Material entity bearing protective resistance.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">resistant entity</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000576 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000576">
<rdfs:subClassOf>
<owl:Class>
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<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
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<owl:Restriction>
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<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0045087"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Immunity to pathogen that inheres in an organism in virtue of germline encoded components that directly recognize components of potential pathogens.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">innate immunity to infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000578 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000578">
<rdfs:subClassOf>
<owl:Class>
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<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0006959"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Immunity to pathogen that inheres in an organism in virtue of components of its circulating body fluid, e.g. blood, lymph, hemolymph.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>"Circulating body fluid" refers to blood, lymph, and hemolymph.</rdfs:comment>
<rdfs:label xml:lang="en">humoral immunity to infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000579 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000579">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000448"/>
<obo:IAO_0000115 xml:lang="en">Immunity to pathogen that inheres in an organism in virtue of its leukocytes.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">leukocyte-mediated immunity to infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000580 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000580">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000448"/>
<obo:IAO_0000115 xml:lang="en">Immunity to pathogen that inheres in an organism in virtue of antibodies not produced by that organism.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">passive immunity to infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000581 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000581">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000445"/>
<obo:IAO_0000115 xml:lang="en">Resistance to drug that mitigates the damaging effects of an antibiotic.</obo:IAO_0000115>
<obo:IAO_0000116>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000116>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">antibiotic resistance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000583 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000583">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
<obo:IAO_0000115 xml:lang="en">Pathogen whose infection incidence is increasing following its first introduction into a new host Species.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">emerging pathogen</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0000584 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000584">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000549"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001163"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
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<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000549"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Toxin bearing a cytotoxin disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">cytotoxin</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000585 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000585">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000027"/>
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<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
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<owl:Class>
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<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002297"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000045"/>
</owl:Restriction>
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<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000588"/>
<obo:IAO_0000115 xml:lang="en">Collective disposition to initiate processes that result in a disorder.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">collective pathogenic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000586 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000586">
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<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000087"/>
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<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
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<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
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</owl:someValuesFrom>
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</owl:someValuesFrom>
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</owl:intersectionOf>
</owl:Class>
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<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<obo:IAO_0000115 xml:lang="en">Part of an organism that itself is part of an extended organism with a pathogen as part, which participates in the formation of the infection.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000587 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000587">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000446"/>
<obo:IAO_0000115 xml:lang="en">Resistance to pathogen that inheres in an organism due to an allele or combination of alleles in its genome.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>The resistance of individuals to HIV invasion oonferred by particular CCR5 alleles is an example. Resistance against malaria conferred by the sickle cell gene is another.</rdfs:comment>
<rdfs:label xml:lang="en">genetic resistance to pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000588 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000588">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000455"/>
<obo:IAO_0000115 xml:lang="en">Collective disposition the realization of which mitigates the damaging effects of some entity on members of the collection.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">collective resistance disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000589 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000589">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Organism that has an immunodeficiency.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">immunocompromised organism</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunodeficient organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000590 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000590">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000495"/>
<obo:IAO_0000115 xml:lang="en">Infectious disease course that unfolds over a long period of time.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">chronic infectious disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000592 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000592">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
<rdfs:subClassOf>
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<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
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<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000621"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000621"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Organism population whose members have acquired immunity to an infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">immune population</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000593 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000593">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000038"/>
<obo:IAO_0000115 xml:lang="en">One-dimensional temporal region during which a transmission process occurs.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/trans.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">transmission interval</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000596 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000596">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Organism that has an infectious disposition.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">This is an inferred subclass of pathogen.</obo:IAO_0000116>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000603 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000603">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000625"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Process by which an infectious agent or infectious structure, established in a host, becomes part of an infection in the host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">process of establishing an infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000604 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000604">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000625"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002234"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000615"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000625"/>
<obo:IAO_0000115 xml:lang="en">Establishment of localization in host process in which an organism or acellular structure establishes a colony in or on a host.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">colonization of host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000606 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000606">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000604"/>
<obo:IAO_0000115 xml:lang="en">Colonization of host process that results in a clinically abnormal colony.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">establishment of a clinically abnormal colony</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000607 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000607">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 xml:lang="en">Process in which an entity comes into being as a result of the process.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">production</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000608 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000608">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000607"/>
<obo:IAO_0000115 xml:lang="en">Production process in which a participant creates a copy of itself.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">replication</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000610 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000610">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002212"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0006955"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 xml:lang="en">Process that attenuates an immune response.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunosuppression</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000611 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000611">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000610"/>
<obo:IAO_0000115 xml:lang="en">Immunosuppression which unfolds as part of the natural self-regulation of an immune response.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">physiologic immunosuppression</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000612 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000612">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000610"/>
<obo:IAO_0000115 xml:lang="en">Immunosuppression process which arises as the result of a disorder.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathologic immunosuppression</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000615 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000615">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000509"/>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Organism population persisting in a site it has colonized.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">colony</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000616 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000616">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000615"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000596"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000615"/>
<obo:IAO_0000115 xml:lang="en">Colony whose members are infectious agents.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<rdfs:label xml:lang="en">infectious agent colony</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000617 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000617">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000045"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000665"/>
<obo:IAO_0000115 xml:lang="en">Disorder of an immune system component that results in defective functioning of the immune system.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunodeficiency</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000618 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000618">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0006955"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000619"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition inhering in an organism that is the disposition to mount a normal immune response.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunocompetence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000619 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000619">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000610"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000655"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115 xml:lang="en">Disposition whose realization negatively regulates an immune response.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">immunosuppressive disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000621 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000621">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000448"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:someValuesFrom>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019814"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019815"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0042101"/>
</owl:unionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0002250"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:allValuesFrom>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019814"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019815"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0042101"/>
</owl:unionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Immunity to pathogen that inheres in an organism in virtue of antigen receptors encoded by somatically diversified genes in the organism's genome and expressed by cells that have undergone selection during a primary immune response in that organism.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">adaptive immunity to infectious agent</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">acquired immunity to infectious agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000623 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000623">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000625"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000626"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000656"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Infectious disposition to be transmitted from one organism to another of the same species by horizontal transmission.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">communicability</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000625 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000625">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0051234"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000066"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000531"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0051234"/>
<obo:IAO_0000115 xml:lang="en">Establishment of localization process in which a material entity reaches a site in or on a host in which it can survive, grow, multiply, or mature.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">establishment of localization in host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000626 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000626">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002297"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000045"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Process by which a disorder comes into existence.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">appearance of disorder</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000627 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000627">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty>
<rdf:Description>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
</rdf:Description>
</owl:onProperty>
<owl:someValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000477"/>
</owl:Restriction>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Infectious disorder that is the physical basis for an unfolding acute infectious disease course.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">acute infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000628 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000628">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<obo:IAO_0000115>Infection that persists for an extended period of time.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">chronic infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000629 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000629">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<rdfs:subClassOf>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001088"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:unionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
<obo:IAO_0000115 xml:lang="en">Role borne by an acellular structure containing a material entity other than the structure, or organism whose extended organism contains a material entity other than the organism, realized in use of that structure or organism as a site of reproduction or replication.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>This should be pushed to: http://purl.obolibrary.org/obo/ogms.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000630 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000630">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000586"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002297"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000063"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000631"/>
<obo:IAO_0000115 xml:lang="en">Infection resulting from a transmission process that unfolds in a hospital.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118 xml:lang="en">nosocomial infection</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">hospital-acquired infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000631 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000631">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000638"/>
<obo:IAO_0000115 xml:lang="en">Infection resulting from a transmission process that did not unfold in a health care facility.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">community-acquired infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000632 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000632">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000549"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001164"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000549"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Toxin bearing a neurotoxin disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">neurotoxin</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000633 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000633">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<obo:IAO_0000115>Infection established as a result of spread from another infection in a non-adjacent location in the extended organism of the host.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">metastatic infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000635 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000635">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Role borne by a material entity that contains a site from which an infectious agent is transmitted.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">source of infection role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000638 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000638">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<obo:IAO_0000115 xml:lang="en">Infection resulting from a transmission process that unfolds in a nursing home.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">nursing-home acquired infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000639 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000639">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
<obo:IAO_0000115 xml:lang="en">Pathogen disposed to infect human hosts.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">infectious human pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000640 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000640">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0000651"/>
<obo:IAO_0000115 xml:lang="en">Immunodeficiency that is not caused by a genetic predisposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:comment>Causes of acquired immunodeficiences include infection and drug treatments (e.g. chemotherapy).</rdfs:comment>
<rdfs:label xml:lang="en">acquired immunodeficiency</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000642 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000642">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
<obo:IAO_0000115>Infection comprised of infectious organisms or structures all of the same Species.</obo:IAO_0000115>
<rdfs:label xml:lang="en">simple infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000643 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000643">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
<obo:IAO_0000115 xml:lang="en">Pathogen whose infection incidence is increasing in a host population as a result of changes in the biology of the host or pathogen, or changes in their interactions.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">re-emerging pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000650 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000650">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000604"/>
<obo:IAO_0000115 xml:lang="en">Colonization of host in a human.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">colonization of human</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000651 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000651">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000617"/>
<obo:IAO_0000115>Immunodeficiency that exists in an organism because of a genetic predisposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118>congenital immunodeficiency</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>primary immunodeficiency</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000653 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000653">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000436"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000454"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000454"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000454"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000454"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000436"/>
<obo:IAO_0000115>Infectious disease inhering in an infectious disorder composed of pathogens bearing reverse zoonotic dispositions.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>reverse zoonosis</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000654 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000654">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000528"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000406"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen with an opportunistic infectious disposition.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000118>opportunist</obo:IAO_0000118>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>opportunistic pathogen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000655 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000655">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000016"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115>Disposition to undergo a transmission process.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>This should be pushed to: http://purl.obolibrary.org/obo/trans.owl</obo:IAO_0000412>
<rdfs:label>transmissibility disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000656 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000656">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
<obo:IAO_0000115>Pathogen transmission process in which a pathogen is transmitted from one host to another of the same species, and the two hosts are not in a parent-child relationship.</obo:IAO_0000115>
<obo:IAO_0000115>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000115>
<rdfs:label>horizontal pathogen transmission process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000657 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000657">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115>Process that results in death.</obo:IAO_0000115>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>process that results in death</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000659 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000659">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Class>
<owl:complementOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
</owl:Restriction>
</owl:complementOf>
</owl:Class>
<owl:Class>
<owl:complementOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000446"/>
</owl:Restriction>
</owl:complementOf>
</owl:Class>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Organism that is not infected with an infectious agent and lacks protective immunity to the infectious agent.</obo:IAO_0000115>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>susceptible organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000663 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000663">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0065007"/>
<obo:IAO_0000115>Process that stops, prevents, or reduces the frequency, rate or extent of a life-sustaining process.</obo:IAO_0000115>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>negative regulation of life-sustaining process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0000665 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0000665">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001107"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000635"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000115>Material entity bearing a source of infection role.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>source of infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001000 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001000">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000144"/>
<obo:IAO_0000117>John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>infection incidence profile</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001001 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001001">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000144"/>
<obo:IAO_0000117>John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>infection incidence proportion profile</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001002 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001002">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000144"/>
<obo:IAO_0000117>John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label>infection incidence rate profile</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001005 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001005">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000456"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000056"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000612"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Immunosuppressed organism that is experiencing pathologic immunosuppression.</obo:IAO_0000115>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">negative regulation of establishment of localization</rdfs:label>
<rdfs:label xml:lang="en">pathologically immunosuppressed organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001007 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001007">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0065007"/>
<obo:IAO_0000115>Process that stops, prevents, or reduces the frequency, rate or extent of a production process.</obo:IAO_0000115>
<obo:IAO_0000117>John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">negative regulation of production</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001008 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001008">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001007"/>
<obo:IAO_0000115>Process that stops, prevents, or reduces the frequency, rate or extent of a replication process.</obo:IAO_0000115>
<obo:IAO_0000117>John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">negative regulation of replication</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001009 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001009">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000035"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_999999"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001083"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Process boundary that marks the start of the life cycle of a pathogen.</obo:IAO_0000115>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">John Beverley</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen birth process boundary</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001010 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001010">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000035"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001009"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_999999"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001085"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Process boundary that marks the end of the life cycle of a pathogen.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen death process boundary</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001011 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001011">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001005"/>
<obo:IAO_0000115>Pathologically immunosuppressed organism that is experiencing drug-based immunosuppression.</obo:IAO_0000115>
<obo:IAO_0000117>Alex Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">drug-based immunosuppressed organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001025 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001025">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001092"/>
<obo:IAO_0000115>Disposition to kill fungi.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">fungicidal disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001027 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001027">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001092"/>
<obo:IAO_0000115>Disposition to kill bacteria.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">bactericidal disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001028 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001028">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001091"/>
<obo:IAO_0000115>Disposition to inhibit the reproduction of bacteria.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">bacteriostatic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001029 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001029">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001092"/>
<obo:IAO_0000115>Disposition to kill parasites.</obo:IAO_0000115>
<obo:IAO_0000116>We use parasite in the sense of organisms that are parasitic in humans.</obo:IAO_0000116>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">parasiticidal disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001030 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001030">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001091"/>
<obo:IAO_0000115>Disposition to inhibit the reproduction of parasites.</obo:IAO_0000115>
<obo:IAO_0000116>'Parasite' is used in the sense of eukaryotic organisms that are parasitic in humans.</obo:IAO_0000116>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">parasitostatic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001040 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001040">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001090"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001028"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002212"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0032502"/>
</owl:Restriction>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001090"/>
<obo:IAO_0000115>Static agent bearing a bacteriostatic disposition.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">bacteriostatic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001041 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001041">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001089"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001027"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Cidal agent with a bactericidal disposition that is realized in a process of killing bacteria.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">bactericidal</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001054 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001054">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001088"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Acellular structure that has an infectious disposition.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">This is an inferred subclass of pathogen.</obo:IAO_0000116>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infectious structure</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001065 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001065">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000027"/>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115 xml:lang="en">Aggregate of acellular structures.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">acellular structure aggregate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001083 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001083">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000148"/>
<obo:IAO_0000115>Zero-dimensional temporal region occupied by a pathogen birth process boundary.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen birth temporal region</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001085 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001085">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000148"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000062"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001083"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Zero-dimensional temporal region occupied by a pathogen death process boundary.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen death temporal region</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001088 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001088">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000030"/>
<rdfs:subClassOf>
<owl:Class>
<owl:complementOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CL_0000000"/>
</owl:Restriction>
</owl:complementOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000112 xml:lang="en">prions</obo:IAO_0000112>
<obo:IAO_0000112 xml:lang="en">viruses</obo:IAO_0000112>
<obo:IAO_0000115>Object that is an arrangement of interrelated acellular parts forming a biological unit.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">acellular structure</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001089 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001089">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001092"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000657"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/IDO_0001090"/>
<obo:IAO_0000115>Material entity with a cidal agent disposition that is realized in a process of killing bacteria, fungi, parasites, or viruses.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">cidal agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001090 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001090">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001091"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002212"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0032502"/>
</owl:Restriction>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000115>Material entity bearing a static agent disposition.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">static agent</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001091 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001091">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<obo:IAO_0000115>Disposition to inhibit the reproduction of bacteria, fungi, or parasites, or inhibit the replication of viruses.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">static agent disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001092 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001092">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<obo:IAO_0000115>Disposition to kill bacteria, fungi, parasites, or viruses.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">cidal agent disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001093 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001093">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000538"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001054"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001094"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen host bearing an infectious structure host role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infectious structure host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001094 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001094">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000415"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001054"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen host role borne by an object or organism whose extended organism contains an infectious structure.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infectious structure host role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001095 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001095">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001096"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Material entity bearing a pathogen transporter role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen transporter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001096 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001096">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001015"/>
<owl:someValuesFrom>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001054"/>
</owl:unionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000002"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Role borne by a material entity in or on which a pathogen is located, from which the pathogen may be transmitted to a new host.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen transporter role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001109 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001109">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001111"/>
<obo:IAO_0000115>Pathogen generative stage that is a temporal subdivision of an infectious agent developmental process.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infectious agent generative stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001110 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001110">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001111"/>
<obo:IAO_0000115>Pathogen generative stage that is a temporal subdivision of an infectious structure developmental process.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infectious structure generative stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001111 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001111">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/FBdv_00005259"/>
<obo:IAO_0000115>Generative stage that is a temporal subdivision of a pathogen developmental process.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen generative stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001124 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001124">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000415"/>
<obo:IAO_0000115>Pathogen host role borne by an organism whose extended organism contains a pathogen bearing an infectious disposition towards the host, and the host has no symptoms of the infectious disease caused by the pathogen.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">asymptomatic carrier role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001126 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001126">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000538"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001124"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen host with an infection as part but exhibits no signs or symptoms.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">asymptomatic carrier</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001127 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001127">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001093"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001124"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Infectious structure host bearing an asymptomatic carrier role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">asymptomatic infectious structure carrier</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001133 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001133">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000415"/>
<obo:IAO_0000115>Pathogen host role borne by an organism whose extended organism contains a pathogen bearing an infectious disposition towards the host, and the host has manifested symptoms of the infectious disease caused by the pathogen.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">symptomatic carrier role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001134 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001134">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000538"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001133"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen host with infection as part that exhibits symptoms.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">symptomatic carrier</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001163 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001163">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
<obo:IAO_0000115>Toxin disposition realized in processes resulting in damage to host cells.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">cytotoxin disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001164 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001164">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
<obo:IAO_0000115>Toxin disposition realized in damaging or interfering with the function of nerve tissue.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">neurotoxin disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001165 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001165">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000426"/>
<obo:IAO_0000115>Toxin disposition that is a structural component of a pathogen and is realized only during cytolsis.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">endotoxin disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001166 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001166">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000427"/>
<obo:IAO_0000115>Exotoxin disposition ithat is realized in a process of damaging intestinal mucosa cells.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">enterotoxin disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001167 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001167">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001093"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001133"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Infectious structure host bearing a symptomatic carrier role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">symptomatic infectious structure carrier</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001168 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001168">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000537"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001133"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Infectious agent host bearing an infectious agent carrier role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">symptomatic infectious agent carrier</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001172 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001172">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001065"/>
<obo:IAO_0000115 rdf:resource="http://purl.obolibrary.org/obo/ido.owl"/>
<obo:IAO_0000115>Acellular structure aggregate whose members are infectious structures.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infectious structure aggregate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001196 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001196">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001095"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001130"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen transporter bearing a pathogen vector role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen vector</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001197 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001197">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001196"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000420"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen vector bearing a biological vector role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">biological vector</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001198 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001198">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001196"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000419"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen vector bearing a mechanical vector role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">mechanical vector</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001199 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001199">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000543"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000422"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogen vehicle bearing a biological vehicle role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">biological vehicle</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001335 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001335">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000625"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000066"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000625"/>
<obo:IAO_0000115>Establishment of localization in or on a human host.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">establishment of localization in human host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001343 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001343">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000038"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000519"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001348"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>One-dimensional temporal region beginning with the establishing of an infection in a host and ending when the host becomes contagious.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">latency interval</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001344 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001344">
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<rdfs:subClassOf>
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<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_999999"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001348"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Process boundary that marks the start of an infection, latency process, and incubation process.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infection start process boundary</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0001345 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001345">
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</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Process boundary marking the end of a latency period.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">latency end process boundary</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0001346 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001346">
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<obo:IAO_0000115>Process boundary marking the end of an incubation period.</obo:IAO_0000115>
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<rdfs:label xml:lang="en">incubation end process boundary</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0001348 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001348">
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<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infection start temporal region</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0001349 -->
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<obo:IAO_0000115>Zero-dimensional temporal region occupied by an infection end process boundary.</obo:IAO_0000115>
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<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infection end temporal region</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0001350 -->
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<obo:IAO_0000115>Zero-dimensional temporal region occupied by a latency end process boundary.</obo:IAO_0000115>
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<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
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<!-- http://purl.obolibrary.org/obo/IDO_0001351 -->
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</owl:Restriction>
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<obo:IAO_0000115>Zero-dimensional temporal region occupied by a communicability end process boundary.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">communicability end temporal region</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0001352 -->
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<obo:IAO_0000115>Zero-dimensional temporal region occupied by an incubation end process boundary.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">incubation end temporal region</rdfs:label>
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<!-- http://purl.obolibrary.org/obo/IDO_0001353 -->
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</owl:Restriction>
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<obo:IAO_0000115>Zero-dimensional temporal region occupied by a communicability start process boundary.</obo:IAO_0000115>
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<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
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<!-- http://purl.obolibrary.org/obo/IDO_0001354 -->
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<!-- http://purl.obolibrary.org/obo/IDO_0001355 -->
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<obo:IAO_0000115>Process boundary marking the start of an incubation interval.</obo:IAO_0000115>
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<!-- http://purl.obolibrary.org/obo/IDO_0001356 -->
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<!-- http://purl.obolibrary.org/obo/IDO_0001357 -->
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<!-- http://purl.obolibrary.org/obo/IDO_0001374 -->
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<obo:IAO_0000115>Biological role borne by a molecular entity that serves as the site on an antigen realized in immune system recognition and binding by antibodies.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">epitope role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001377 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001377">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VSMO_"/>
<obo:IAO_0000115>Surveillance process aiming to produce information about one or several objects, in the form of microorganisms, which have the role of pathogen.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">pathogen surveillance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IDO_0001378 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IDO_0001378">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VSMO_"/>
<obo:IAO_0000115>Surveillance process aiming to produce information about one or several objects, in the form of arthropods, which have the role of serving as biological pathogen vectors.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">vector surveillance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_10239 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_10239">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001088"/>
<obo:IAO_0000115>Acellular structure with RNA or DNA genetic material which uses host metabolic resources for RNA or DNA replication.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">The mass noun term label imported from the NCBITaxon "Viruses" has been replaced with the count noun "virus", to align with BFO.</obo:IAO_0000116>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ncbitaxon.owl"/>
<rdfs:label>virus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_11118 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_11118">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_35278"/>
<obo:IAO_0000115>Positive-sense single-stranded RNA virus with a helically symmetrical nucleocapsid, lipid bilayer viral envelope, and surface spike peplomers.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_11118</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">coronavirus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_1335626 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_1335626">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_11118"/>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_1335626</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">MERS-CoV</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_2 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_2">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ncbitaxon.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">bacteria</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_2169561 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_2169561">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000112>Human Immunodeficiency Virus</obo:IAO_0000112>
<obo:IAO_0000115>Virus with genetic material encoded in single-stranded RNA that replicates using reverse transcriptase to convert positive-sense RNA to DNA.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">http://purl.obolibrary.org/obo/NCBITaxon_2169561</obo:IAO_0000412>
<oboInOwl:hasExactSynonym>Baltimore Classification Group VI</oboInOwl:hasExactSynonym>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">single-stranded RNA retrovirus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_227859 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_227859">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_11118"/>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_227859</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_2731342 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_2731342">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000112>Parvovirus</obo:IAO_0000112>
<obo:IAO_0000115>Virus with genetic material encoded in single-stranded DNA and replicates using DNA polymerase.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">http://purl.obolibrary.org/obo/NCBITaxon_2731342</obo:IAO_0000412>
<oboInOwl:hasExactSynonym>Baltimore Classification Group II</oboInOwl:hasExactSynonym>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">single-stranded DNA virus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_2759 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_2759">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0100026"/>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ncbitaxon.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">eukaryota</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_35237 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_35237">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000112>Adenovirus</obo:IAO_0000112>
<obo:IAO_0000112>Poxvirus</obo:IAO_0000112>
<obo:IAO_0000115>Virus that has its genetic material encoded in double-stranded DNA and replicates using DNA polymerase.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_35237</obo:IAO_0000412>
<oboInOwl:hasExactSynonym>Baltimore Classification Group I</oboInOwl:hasExactSynonym>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">double-stranded DNA virus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_35268 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_35268">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000112>Hepatitus B Virus</obo:IAO_0000112>
<obo:IAO_0000115>Virus with genetic material that is encoded in double-stranded DNA and replicates through single-stranded RNA intermediate.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_35268</obo:IAO_0000412>
<oboInOwl:hasExactSynonym>Baltimore Classification Group VII</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>Pararetrovirus</oboInOwl:hasExactSynonym>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">double-stranded DNA retrovirus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_35278 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_35278">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000112>Coronavirus</obo:IAO_0000112>
<obo:IAO_0000112>Picornavirus</obo:IAO_0000112>
<obo:IAO_0000115>Virus with genetic material encoded in single-stranded RNA that can be translated directly into proteins.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_35278</obo:IAO_0000412>
<oboInOwl:hasExactSynonym>Baltimore Classification Group IV</oboInOwl:hasExactSynonym>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">positive-sense single-stranded RNA virus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_35301 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_35301">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000112>Rhabdovirus</obo:IAO_0000112>
<obo:IAO_0000115>Virus with genetic material encoded in single-stranded RNA that can be translated into proteins only after transcription by RNA polymerase.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_35301</obo:IAO_0000412>
<oboInOwl:hasExactSynonym>Baltimore Classification Group V</oboInOwl:hasExactSynonym>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">negative-sense single-stranded RNA virus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_35325 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_35325">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000112>Reovirus</obo:IAO_0000112>
<obo:IAO_0000115>Virus with genetic material encoded in double-stranded RNA.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/NCBITaxon_35325</obo:IAO_0000412>
<oboInOwl:hasExactSynonym>Baltimore Classification Group III</oboInOwl:hasExactSynonym>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">double-stranded RNA virus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_36469 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_36469">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001088"/>
<obo:IAO_0000115>Acellular structure that consists of an abnormally folded protein which replicates by by transmitting its abnormal structure to other proteins.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:comment>http://purl.obolibrary.org/obo/ncbitaxon.owl</rdfs:comment>
<rdfs:label xml:lang="en">prion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/NCBITaxon_9606 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_9606">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_2759"/>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ncbitaxon.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">homo sapiens</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000011 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000011">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115>Process that realizes a plan which is the concretization of a plan specification.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">planned process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000047 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000047">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000094"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Material entity that is created or changed during material processing.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">processed material</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000070 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000070">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000094"/>
<obo:IAO_0000115>Planned process with the objective to produce information about some evaluant.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">assay</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000086 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000086">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<obo:IAO_0000115>Role inhering in a molecular entity when the molecular entity is used to produce a chemical reaction to detect, measure, or produce other substances.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">reagent role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000094 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000094">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000011"/>
<obo:IAO_0000115>Planned process which results in physical changes in a specified input material.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">material processing</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000237 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000237">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_24432"/>
<obo:IAO_0000115>Biological role inhering in some molecular entity, that stimulates an immune response when identified by the immune systems cells.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">antigen role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000406 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000406">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_4705"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000415"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Double stranded DNA that is the specified output of a polymerase chain reaction</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">PCR product</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000415 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000415">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0600058"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_16991"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000299"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000406"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Enzymatic amplification in which a DNA polymerase is used to amplify a piece of DNA by in vitro enzymatic replication.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">polymerase chain reaction</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0000552 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000552">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0600058"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33697"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000299"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000406"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Material processing amplifying cDNA during a PCR reaction while the cDNA results from a retrotranscription of messenger RNA isolated from a material entity.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">reverse transcribed PCR</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0100026 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0100026">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000030"/>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000045"/>
<obo:IAO_0000115 xml:lang="en">Object that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/obi.owl"/>
<rdfs:label xml:lang="en">organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_0600058 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0600058">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000094"/>
<obo:IAO_0000115>Material processing using enzymes to increase the number of molecules of a material entity.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">enzymatic amplification</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_1110001 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_1110001">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_1110034"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001372"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001374"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Molecular entity bearing the epitope role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">epitope</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OBI_1110034 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_1110034">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000237"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<obo:IAO_0000115>Molecular entity bearing an antigen role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/obi.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">antigen</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OGMS_0000020 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OGMS_0000020">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000003"/>
<obo:IAO_0000115 xml:lang="en">Process experienced by a patient which can only be experienced by the patient, that is hypothesized to be clinically relevant.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ogms.owl"/>
<rdfs:label>symptom</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OGMS_0000031 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OGMS_0000031">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<obo:IAO_0000115 xml:lang="en">Disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ogms.owl"/>
<rdfs:label>disease</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OGMS_0000045 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OGMS_0000045">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000115 xml:lang="en">Material entity that is a clinically abnormal part of an extended organism.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ogms.owl"/>
<rdfs:label>disorder</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OGMS_0000063 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OGMS_0000063">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115 xml:lang="en">Totality of all processes through which a given disease instance is realized.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ogms.owl"/>
<rdfs:label>disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OGMS_0000087 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000027"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 xml:lang="en">Object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/ogms.owl"/>
<rdfs:label>extended organism</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OMRSE_00000061 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000061">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
<obo:IAO_0000115>Material entity that is a human made structure with firm connection between its foundation and the ground.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/OMRSE</obo:IAO_0000412>
<rdfs:label xml:lang="en">architectual structure</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OMRSE_00000062 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000062">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000061"/>
<obo:IAO_0000115>Architectural structure that bears some function.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/OMRSE</obo:IAO_0000412>
<rdfs:label xml:lang="en">facility</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OMRSE_00000063 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000063">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000102"/>
<obo:IAO_0000115>Facility that is run by a hospital organization and is the bearer of a hospital function.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/OMRSE</obo:IAO_0000412>
<rdfs:label xml:lang="en">hospital facility</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/OMRSE_00000102 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000102">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000062"/>
<obo:IAO_0000115>Facility that is administered by a health care organization for the purpose of providing health care to a patient or patient population.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/OMRSE</obo:IAO_0000412>
<rdfs:label xml:lang="en">healthcare facility</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PR_000003622 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PR_000003622">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<obo:IAO_0000115>Protein complex consisting of an N-terminal peptidase M2 domain and a C-terminal collectrin renal amino acid transporter domain, which is attached to surface of alveolar, enterocyte cells, arterial and venous endothelial cells, and cortical neurons.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/uniprot.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">angiotensin-converting enzyme 2</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/TRANS_0000000 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/TRANS_0000000">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process in which a pathogen is transmitted directly or indirectly to a new host.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">TRANS includes a sibling class of 'indirect' labeled 'direct', and these terms mirror standard definitions of 'direct transmission' and 'indirect transmission' in the literature. However, in the literature and in TRANS the definitions seem confused. For example, direct transmission is claimed to involve direct contact, yet respiratory droplet spread from a host - which plausibly involves a vehicle - is counted as direct rather than indirect transmission. We will follow standard use in part, adopting indirect transmission, but not direct, and defining a term for contact transmission.</obo:IAO_0000116>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/trans.owl"/>
<rdfs:label>pathogen transmission process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/TRANS_0000002 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/TRANS_0000002">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathogen transmission process in which a pathogen is indirectly transferred to a host by intermediary vehicles or vectors.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">John Beverley</obo:IAO_0000117>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/trans.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">indirect pathogen transmission process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/TRANS_0000007 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/TRANS_0000007">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
<obo:IAO_0000115 xml:lang="en">Pathogen transmission process in which a pathogen is transferred to a host through surface-to-surface contact.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://purl.obolibrary.org/obo/trans.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">contact pathogen transmission process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/TRANS_0000008 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/TRANS_0000008">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000002"/>
<obo:IAO_0000115 xml:lang="en">Indirect pathogen transmission process in which a pathogen is transmitted from a host expelling respiratory droplets to another host.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://purl.obolibrary.org/obo/trans.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">droplet pathogen transmission process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/UBERON_0000178 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0000178">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000000"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A fluid that is composed of blood plasma and erythrocytes.</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">blood</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/UBERON_0000463 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0000463">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CARO_0000000"/>
<obo:IAO_0000115>Anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/uberon.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">organism substance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/UBERON_0006538 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0006538">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000463"/>
<obo:IAO_0000115>Organism substance that is secreted by a respiratory system.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/uberon.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">respiratory secretion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/UBERON_0007311 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0007311">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0006538"/>
<obo:IAO_0000115>Matter ejected from the lungs, bronchi, and trachea, through the mouth.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/uberon.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">sputum</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/UniProtKB_P0DTC2 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UniProtKB_P0DTC2">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0000508"/>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Macromolecule glycoprotein component of SARS-CoV-2 membrane.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/uniprot.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">SARS-CoV-2 spike glycoprotein</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/UniProtKB_P0DTC9 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UniProtKB_P0DTC9">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<obo:IAO_0000115>Macromolecule consisting of positive stranded viral RNA of SARS-CoV-2.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/uniprot.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 nucleoside protein</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/UniProtKN_P0DTC5 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UniProtKN_P0DTC5">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33839"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019031"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Macromolecule component of SARS-CoV-2 envelope.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/uniprot.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-CoV-2 membrane protein</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0000505 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0000505">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000472"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000178"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000472"/>
<obo:IAO_0000115 xml:lang="en">Infection that has as part virus particles located in the blood.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">viremia</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0000508 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0000508">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<obo:IAO_0000115 xml:lang="en">Virus that is in its assembled state consisting of genomic material (DNA or RNA) surrounded by coating molecules.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/vido.owl"/>
<rdfs:label xml:lang="en">virion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0000564 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0000564">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001089"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001022"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Cidal agent with a viricidal disposition that is realized in a process of killing viruses.</obo:IAO_0000115>
<obo:IAO_0000117>Albert Goldfain</obo:IAO_0000117>
<obo:IAO_0000117>Alexander Diehl</obo:IAO_0000117>
<obo:IAO_0000117>Lindsay Cowell</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">viricide</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001004 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001004">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001090"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001024"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002212"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Static agent bearing a viostatic disposition.</obo:IAO_0000115>
<obo:IAO_0000117>John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<rdfs:label>virostatic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001016 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001016">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000608"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_999999"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000519"/>
</owl:Restriction>
</rdfs:subClassOf>
<owl:disjointWith rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001086"/>
<obo:IAO_0000115 xml:lang="en">Replication process in which a virus containing some portion of genetic material inherited from a parent virus is replicated.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">John Beverley</obo:IAO_0000117>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">virus replication</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001022 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001022">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001092"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001089"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000660"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001010"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Disposition to kill viruses.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viricidal disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001024 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001024">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001091"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001090"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002212"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">A disposition to inhibit the reproduction of viruses.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">virostatic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001066 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001066">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001065"/>
<obo:IAO_0000115 xml:lang="en">Acellular structure aggregate whose members are viruses</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">virus aggregate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001067 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001067">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001065"/>
<obo:IAO_0000115 xml:lang="en">Acellular infectious aggregate whose members are viroids.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viroid aggregate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001069 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001069">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001065"/>
<obo:IAO_0000115 xml:lang="en">Acellular infectious aggregate whose members are prions.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">prion aggregate</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001086 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001086">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000608"/>
<obo:IAO_0000115>Replication process in which a prion facilitates abnormal folding in proteins resulting in additional, identical, abnormally folded proteins.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">prion replication</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001114 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001114">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001110"/>
<obo:IAO_0000115>Infectious structure generative stage that is a temporal subdivision of a virus developmental process.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">virus generative stage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001120 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001120">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000495"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000055"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/VIDO_0001123"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000495"/>
<obo:IAO_0000115>Infectious disease whose physical basis is a virus disorder that is clinically abnormal in virtue of the presence of the relevant virus population.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viral disease course</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001122 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001122">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000504"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty>
<rdf:Description>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
</rdf:Description>
</owl:onProperty>
<owl:someValuesFrom>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001120"/>
</owl:Restriction>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000504"/>
<obo:IAO_0000115>Infectious disorder that exists as a result of a process of formation of disorder initiated by a virus or virus population.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">virus disorder</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001128 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001128">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001093"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Infectious structure host whose extended organism has some virus part.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">virus host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001140 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001140">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/VIDO_0001123"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001138"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001138"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001142"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/IDO_0000664"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001138"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:allValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001138"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:allValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/VIDO_0001123"/>
<obo:IAO_0000115>Viral disease inhering in a coronavirus disorder which is realized in some coronavirus disease course</obo:IAO_0000115>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">coronavirus disease</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001169 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001169">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000570"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001127"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001128"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Subclinical infection that is part of a virus host.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">subclinical virus infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001188 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001188">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0006538"/>
<obo:IAO_0000412>Respiratory secretion composed of a small column of liquid, bounded completely or almost completely by free surfaces which maintains its shape due to the surface tension of the liquid.</obo:IAO_0000412>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">respiratory droplet</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001189 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001189">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001188"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000423"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001188"/>
<obo:IAO_0000115>Respiratory droplet bearing a fomite role.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">respiratory droplet fomite</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001190 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001190">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001189"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000423"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Respiratory droplet fomite with virus part.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">respiratory droplet virus fomite</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001194 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001194">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001016"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Pathogenesis process realization of a pathogenic disposition inhering in a virus or virus population, having at least the proper process parts: (1) pathogen transmission, (2) establishment of localization in host, (3) process of establishing a viral infection, and (4) appearance of a virus disorder.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viral pathogenesis</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001195 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001195">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000603"/>
<obo:IAO_0000115>Process of establishing an infection in which a virus participates.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">process of establishing viral infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001266 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001266">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CL_0000000"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001267"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CL_0000000"/>
<obo:IAO_0000115>Cell with an adhesion factor part bearing a viral adhesion disposition</obo:IAO_0000115>
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/vido.owl"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">virus adhesion susceptible cell</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001267 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001267">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000437"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23367"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Adhesion disposition borne by a macromolecule part of a virus that is the disposition to participate in a virus attachment process</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viral adhesion disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001331 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001331">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000019"/>
<obo:IAO_0000115>Quality inhering in a portion of fluid that is the proportion of virions to volume of that portion of fluid</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viral load</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001333 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001333">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus which infects and replicates within or on bacteria or archea.</obo:IAO_0000115>
<obo:IAO_0000115>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000115>
<obo:IAO_0000116>This is an inferred subclass of pathogen.</obo:IAO_0000116>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">bacteriophage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001334 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001334">
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus which infects and replicates within or on viruses.</obo:IAO_0000115>
<obo:IAO_0000116>This is an inferred subclass of pathogen.</obo:IAO_0000116>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">virophage</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001336 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001336">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000625"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000066"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000625"/>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">establishment of localization in virus host</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001361 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001361">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<rdfs:subClassOf>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_10239"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000091"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</rdfs:subClassOf>
<obo:IAO_0000115>Virus that causes cancer in hosts.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">oncovirus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001363 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001363">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001088"/>
<obo:IAO_0000115>Acellular structure having some arrangement of viral components (e.g. viral capsid, viral DNA/RNA), that is clinically abnormal.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">disordered virus</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001364 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001364">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001088"/>
<obo:IAO_0000115>Acellular structure having some arrangement of protein components, that is clinically abnormal.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">disordered prion</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001365 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001365">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000038"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001343"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000412>One-dimensional temporal region beginning with the establishment of a virus in a host and ending with the first appearance of a virion following viral release.</obo:IAO_0000412>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">eclipse interval</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001372 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001372">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000029"/>
<obo:IAO_0000115>Site part of an antigen that is recognized by immune system cells and to which antibodies attach.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">epitope site</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001386 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001386">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000503"/>
<obo:IAO_0000115>Process in which multiple viral disease epidemics of the same type of viral disease unfold over overlapping periods of time and affect organism populations located in different geographic regions, including different countries and continents.</obo:IAO_0000115>
<obo:IAO_0000115>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viral disease pandemic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VIDO_0001387 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VIDO_0001387">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0000502"/>
<obo:IAO_0000115>Process of viral disease realizations and for which there is a statistically significant increase in the infectious disease incidence of a population.</obo:IAO_0000115>
<obo:IAO_0000115>http://purl.obolibrary.org/obo/vido.owl</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">viral disease epidemic</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/VSMO_ -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/VSMO_">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000011"/>
<obo:IAO_0000115>Planned process with the objective to produce information about some evaluant with the purpose of, if justified by the information gathered, managing, directing, or protecting.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/vsmo.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">surveillance process</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/CARO_0000005 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/CARO_0000005">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000029"/>
<obo:IAO_0000115 xml:lang="en">Site generated by morphogenetic or physiologic processes that is bounded by an anatomical surface.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://purl.obolibrary.org/obo/caro.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">anatomical space</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/CARO_0000062 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/CARO_0000062">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ido.owl/CARO_0000005"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CL_0000000"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/CARO_0000005"/>
<obo:IAO_0000115 xml:lang="en">Anatomical space that is part of a cell.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://purl.obolibrary.org/obo/caro.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">cell space</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/COVIDO_0001170 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/COVIDO_0001170">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/VIDO_0001169"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001127"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001128"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_11118"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001169"/>
<obo:IAO_0000115>Subclinical virus infection with coronavirus as part.</obo:IAO_0000115>
<obo:IAO_0000412>This should be imported from: http://purl.obolibrary.org/obo/cido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">subclinical coronavirus infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/COVIDO_0001171 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/COVIDO_0001171">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ido.owl/COVIDO_0001170"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0001127"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VIDO_0001128"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_227859"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/COVIDO_0001170"/>
<obo:IAO_0000115>Subclinical coronavirus infection with SARS-CoV-2 as part.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">subclinical SARS-CoV-2 infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/IDO_0001026 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001026">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001091"/>
<obo:IAO_0000115>Disposition to inhibit the reproduction of fungi.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">fungistatic disposition</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/IDO_0001036 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001036">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/CARO_0000005"/>
<obo:IAO_0000115>Anatomical space through which a pathogen enters an organism.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen portal of entry site</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/IDO_0001037 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001037">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/CARO_0000005"/>
<obo:IAO_0000115>Anatomical space through which a pathogen exits an organism.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogen portal of exit site</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/IDO_0001072 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001072">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ido.owl/CARO_0000005"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OGMS_0000087"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000586"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 xml:lang="en">Anatomical space in which an infection is located.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">site of infection</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/IDO_0001107 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001107">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ido.owl/CARO_0000005"/>
<obo:IAO_0000115>Anatomical space in which an infection appears in a host organism.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">source of infection site</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/IDO_0001130 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001130">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001096"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000415"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0001015"/>
<owl:someValuesFrom>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000596"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0001054"/>
</owl:unionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:allValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000002"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IDO_0001096"/>
<obo:IAO_0000115>A pathogen transporter role that is borne by an organism active in the transfer of an infectious agent or infectious structure to an organism of another species in which it can realize its infectious disposition.</obo:IAO_0000115>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:comment>The role is realized in a process that transfers an infectious organism from one location to another.</rdfs:comment>
<rdfs:label xml:lang="en">pathogen vector role</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/ido.owl/IDO_0001157 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ido.owl/IDO_0001157">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000450"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000603"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000054"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/TRANS_0000000"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IDO_0000528"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115>Pathogenic disposition borne by a pathogen to be transmitted to a host and become part of an infection in that host or immunocompetent members of the same species as the host.</obo:IAO_0000115>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/ido.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">infectious disposition</rdfs:label>
</owl:Class>
<!-- http://www.ebi.ac.uk/efo/EFO_0000684 -->
<owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0000684">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OGMS_0000031"/>
<obo:IAO_0000115>Disease that occurs in different organs functioning in respiration and consisting especially of the nose, nasal passages, nasopharynx, larynx, trachea, bronchi, and lungs.</obo:IAO_0000115>
<obo:IAO_0000412>http://www.ebi.ac.uk/efo/efo.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">respiratory system disease</rdfs:label>
</owl:Class>
<!-- http://www.ebi.ac.uk/efo/EFO_0009433 -->
<owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0009433">
<rdfs:subClassOf rdf:resource="http://www.ebi.ac.uk/efo/EFO_0000684"/>
<obo:IAO_0000115>Respiratory system disease located in the lower respiratory tract.</obo:IAO_0000115>
<obo:IAO_0000412>http://www.ebi.ac.uk/efo/efo.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">lower respiratory tract disease</rdfs:label>
</owl:Class>
<!-- http://www.ebi.ac.uk/efo/EFO_1000637 -->
<owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_1000637">
<rdfs:subClassOf rdf:resource="http://www.ebi.ac.uk/efo/EFO_0000684"/>
<obo:IAO_0000115>Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery.</obo:IAO_0000115>
<obo:IAO_0000412>http://www.ebi.ac.uk/efo/efo.owl</obo:IAO_0000412>
<rdfs:label xml:lang="en">acute respiratory distress syndrome</rdfs:label>
</owl:Class>
<!-- http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405 -->
<owl:Class rdf:about="http://www.informatics.jax.org/vocab/gene_ontology/GO:0009405">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<obo:IAO_0000115>Process that generates the ability of a pathogen to induce disorder in an organism.</obo:IAO_0000115>
<obo:IAO_0000116>Process that is the realization of a pathogenic disposition inhering in an pathogen or pathogen population, having at least the proper process parts: (1) pathogen transmission, (2) establishment of localization in host, (3) process of establishing an infection, and (4) appearance of disorder.</obo:IAO_0000116>
<obo:IAO_0000412>http://purl.obolibrary.org/obo/go.owl</obo:IAO_0000412>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">pathogenesis</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/Country -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/Country">
<rdfs:subClassOf rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/GeopoliticalEntity"/>
<obo:IAO_0000115 xml:lang="en">A Geopolitical Entity that delimits a Government with effective internal and external sovereignty over the region and its population, and which is not dependent on or subject to any other power or Geopolitical Entity.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies/</obo:IAO_0000412>
<rdfs:label xml:lang="en">country</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/DescriptiveInformationContentEntity -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/DescriptiveInformationContentEntity">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<obo:IAO_0000115 xml:lang="en">Information Content Entity that consists of a set of propositions that describe some Entity.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies/</obo:IAO_0000412>
<rdfs:label xml:lang="en">descriptive information content entity</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/DesignativeInformationContentEntity -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/DesignativeInformationContentEntity">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<obo:IAO_0000115 xml:lang="en">Information Content Entity that consists of a set of symbols that denote some Entity.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies/</obo:IAO_0000412>
<rdfs:label xml:lang="en">designative information content entity</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/DirectiveInformationContentEntity -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/DirectiveInformationContentEntity">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<obo:IAO_0000115 xml:lang="en">Information Content Entity that consists of a set of propositions or images (as in the case of a blueprint) that prescribe some Entity.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies/</obo:IAO_0000412>
<rdfs:label xml:lang="en">directive information content entity</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/DivisionOfGeopoliticalEntity -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/DivisionOfGeopoliticalEntity">
<rdfs:subClassOf rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/GeospatialRegion"/>
<obo:IAO_0000115 xml:lang="en">A Geospatial Region that is a fiat division of a Geopolitical Entity and not a Geopolitical Entity.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies/</obo:IAO_0000412>
<rdfs:label xml:lang="en">division of geopolitical entity</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/GeopoliticalEntity -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/GeopoliticalEntity">
<rdfs:subClassOf rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/GeospatialRegion"/>
<obo:IAO_0000115 xml:lang="en">A geospatial region that delimits the authority of a formally constituted government to exercise its control within the bounded area.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies/</obo:IAO_0000412>
<rdfs:label xml:lang="en">geopolitical entity</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/GeospatialLocation -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/GeospatialLocation">
<rdfs:subClassOf rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/GeospatialRegion"/>
<obo:IAO_0000115 xml:lang="en">A Geospatial Region at which an Entity or Event is located.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies/</obo:IAO_0000412>
<rdfs:label xml:lang="en">geospatial location</rdfs:label>
</owl:Class>
<!-- http://www.ontologyrepository.com/CommonCoreOntologies/GeospatialRegion -->
<owl:Class rdf:about="http://www.ontologyrepository.com/CommonCoreOntologies/GeospatialRegion">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000029"/>
<obo:IAO_0000115 xml:lang="en">A site at or near the surface of the Earth.</obo:IAO_0000115>
<obo:IAO_0000412 xml:lang="en">http://www.ontologyrepository.com/CommonCoreOntologies</obo:IAO_0000412>
<rdfs:label xml:lang="en">geospatial region</rdfs:label>
</owl:Class>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Individuals
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/IAO_0000002 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000002">
<rdfs:label xml:lang="en">example to be eventually removed</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000103 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000103">
<obo:IAO_0000115 xml:lang="en">The term was used in an attempt to structure part of the ontology but in retrospect failed to do a good job</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Person:Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label xml:lang="en">failed exploratory term</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000120 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000120">
<obo:IAO_0000115 xml:lang="en">Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete.</obo:IAO_0000115>
<rdfs:label xml:lang="en">metadata complete</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000121 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000121">
<obo:IAO_0000115 xml:lang="en">term created to ease viewing/sort terms for development purpose, and will not be included in a release</obo:IAO_0000115>
<rdfs:label xml:lang="en">organizational term</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000122 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000122">
<obo:IAO_0000115 xml:lang="en">Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking "ready_for_release" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed "ready_for_release" will also derived from a chain of ancestor classes that are also "ready_for_release."</obo:IAO_0000115>
<rdfs:label xml:lang="en">ready for release</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000123 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000123">
<obo:IAO_0000115 xml:lang="en">Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors.</obo:IAO_0000115>
<rdfs:label xml:lang="en">metadata incomplete</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000124 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000124">
<obo:IAO_0000115 xml:lang="en">Nothing done yet beyond assigning a unique class ID and proposing a preferred term.</obo:IAO_0000115>
<rdfs:label xml:lang="en">uncurated</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000125 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000125">
<obo:IAO_0000115 xml:lang="en">All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor.</obo:IAO_0000115>
<rdfs:label xml:lang="en">pending final vetting</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000224 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000224">
<obo:IAO_0000115 xml:lang="en">Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON: Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON: Melanie Courtot</obo:IAO_0000117>
<rdfs:label xml:lang="en">core</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000226 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000226">
<rdfs:label xml:lang="en">placeholder removed</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000227 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000227">
<obo:IAO_0000116 xml:lang="en">An editor note should explain what were the merged terms and the reason for the merge.</obo:IAO_0000116>
<rdfs:label xml:lang="en">terms merged</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000228 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000228">
<obo:IAO_0000116 xml:lang="en">This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use.</obo:IAO_0000116>
<rdfs:label xml:lang="en">term imported</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000229 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000229">
<obo:IAO_0000116 xml:lang="en">This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created.</obo:IAO_0000116>
<rdfs:label xml:lang="en">term split</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000410 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000410">
<obo:IAO_0000116 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Hard to give a definition for. Intuitively a "natural kind" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents.</obo:IAO_0000116>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf</obo:IAO_0000119>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">universal</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000420 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000420">
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal</obo:IAO_0000115>
<obo:IAO_0000116 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">"definitions", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal.</obo:IAO_0000116>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">defined class</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000421 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000421">
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A named class expression is a logical expression that is given a name. The name can be used in place of the expression.</obo:IAO_0000115>
<obo:IAO_0000116 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions</obo:IAO_0000116>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan Ruttenberg</obo:IAO_0000117>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">named class expression</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000423 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000423">
<obo:IAO_0000115 xml:lang="en">Terms with this status should eventually replaced with a term from another ontology.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
<rdfs:label xml:lang="en">to be replaced with external ontology term</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IAO_0000428 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IAO_0000428">
<obo:IAO_0000115 xml:lang="en">A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
<rdfs:label xml:lang="en">requires discussion</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IDO-COVID-19_0001287 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IDO-COVID-19_0001287">
<rdf:type rdf:resource="http://purl.obolibrary.org/obo/COVIDO_0001139"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">SARS-COV-2 Infection</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IDO-COVID-19_0001301 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IDO-COVID-19_0001301">
<rdf:type rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/Country"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">United States</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/IDO-COVID-19_0001302 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/IDO-COVID-19_0001302">
<rdf:type rdf:resource="http://www.ontologyrepository.com/CommonCoreOntologies/Country"/>
<oboInOwl:term_editor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Beverley</oboInOwl:term_editor>
<rdfs:label xml:lang="en">Canada</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/RO_0001901 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/RO_0001901">
<obo:IAO_0000115>
## Elucidation
This is used when the statement/axiom is assumed to hold true 'eternally'
## How to interpret (informal)
First the "atemporal" FOL is derived from the OWL using the standard
interpretation. This axiom is temporalized by embedding the axiom
within a for-all-times quantified sentence. The t argument is added to
all instantiation predicates and predicates that use this relation.
## Example
Class: nucleus
SubClassOf: part_of some cell
forall t :
forall n :
instance_of(n,Nucleus,t)
implies
exists c :
instance_of(c,Cell,t)
part_of(n,c,t)
## Notes
This interpretation is *not* the same as an at-all-times relation
</obo:IAO_0000115>
<rdfs:label xml:lang="en">axiom holds for all times</rdfs:label>
</owl:NamedIndividual>
<!-- http://purl.obolibrary.org/obo/RO_0001902 -->
<owl:NamedIndividual rdf:about="http://purl.obolibrary.org/obo/RO_0001902">
<obo:IAO_0000115>
## Elucidation
This is used when the first-order logic form of the relation is
binary, and takes no temporal argument.
## Example:
Class: limb
SubClassOf: develops_from some lateral-plate-mesoderm
forall t, t2:
forall x :
instance_of(x,Limb,t)
implies
exists y :
instance_of(y,LPM,t2)
develops_from(x,y)
</obo:IAO_0000115>
<rdfs:label xml:lang="en">relation has no temporal argument</rdfs:label>
</owl:NamedIndividual>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotations
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<rdf:Description rdf:about="http://example.com/bfo-spec-label">
<obo:IAO_0000119>Person:Alan Ruttenberg</obo:IAO_0000119>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000134">
<obo:IAO_0000600 xml:lang="en">To say that each spatiotemporal region s temporally_projects_onto some temporal region t is to say that t is the temporal extension of s. (axiom label in BFO2 Reference: [080-003])</obo:IAO_0000600>
<obo:IAO_0000600 xml:lang="en">To say that spatiotemporal region s spatially_projects_onto spatial region r at t is to say that r is the spatial extent of s at t. (axiom label in BFO2 Reference: [081-003])</obo:IAO_0000600>
</rdf:Description>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000134"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">To say that each spatiotemporal region s temporally_projects_onto some temporal region t is to say that t is the temporal extension of s. (axiom label in BFO2 Reference: [080-003])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/080-003"/>
</owl:Axiom>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/BFO_0000134"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000600"/>
<owl:annotatedTarget xml:lang="en">To say that spatiotemporal region s spatially_projects_onto spatial region r at t is to say that r is the spatial extent of s at t. (axiom label in BFO2 Reference: [081-003])</owl:annotatedTarget>
<obo:IAO_0010000 rdf:resource="http://purl.obolibrary.org/obo/bfo/axiom/081-003"/>
</owl:Axiom>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// General axioms
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<rdf:Description>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AllDisjointClasses"/>
<owl:members rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000020"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000031"/>
</owl:members>
</rdf:Description>
<rdf:Description>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AllDisjointClasses"/>
<owl:members rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000008"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000011"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000035"/>
</owl:members>
</rdf:Description>
<rdf:Description>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AllDisjointClasses"/>
<owl:members rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000009"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000018"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000026"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000028"/>
</owl:members>
</rdf:Description>
<rdf:Description>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AllDisjointClasses"/>
<owl:members rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019061"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019062"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019068"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0019081"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_0046718"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/GO_19076"/>
</owl:members>
</rdf:Description>
<rdf:Description>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AllDisjointClasses"/>
<owl:members rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000401"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000402"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000403"/>
</owl:members>
</rdf:Description>
<rdf:Description>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AllDisjointClasses"/>
<owl:members rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000406"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000407"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000453"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000454"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IDO_0000623"/>
</owl:members>
</rdf:Description>
<rdf:Description>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AllDisjointClasses"/>
<owl:members rdf:parseType="Collection">
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<!-- Generated by the OWL API (version 4.5.9.2019-02-01T07:24:44Z) https://github.com/owlcs/owlapi -->