{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "from IPython.display import display\n",
    "class Fasta:\n",
    "    def __init__(self, data):\n",
    "        self.data = data\n",
    "    def _ipython_display_(self):\n",
    "        bundle = {\n",
    "            'application/vnd.fasta.fasta': self.data,\n",
    "            'text/plain': self.data\n",
    "        }\n",
    "        display(bundle, raw=True)\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "with open('../data/zika_assembled_genomes.fasta') as f:\n",
    "    data = f.read()\n",
    "Fasta(data)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": []
  }
 ],
 "metadata": {
  "kernelspec": {
   "display_name": "Python 3",
   "language": "python",
   "name": "python3"
  },
  "language_info": {
   "codemirror_mode": {
    "name": "ipython",
    "version": 3
   },
   "file_extension": ".py",
   "mimetype": "text/x-python",
   "name": "python",
   "nbconvert_exporter": "python",
   "pygments_lexer": "ipython3",
   "version": "3.6.1"
  }
 },
 "nbformat": 4,
 "nbformat_minor": 2
}